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Search of human proteins with 31795561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31795561 complexin 4 [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31795561 complexin 4 [Homo sapiens] 317 2e-87
gi|71725345 complexin 3 [Homo sapiens] 194 4e-50
gi|5729781 complexin 1 [Homo sapiens] 49 2e-06
gi|56550065 complexin 2 [Homo sapiens] 47 7e-06
gi|5729783 complexin 2 [Homo sapiens] 47 7e-06
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 40 7e-04
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 40 0.001
gi|226497654 RNA binding motif protein 19 [Homo sapiens] 40 0.001
gi|226497574 RNA binding motif protein 19 [Homo sapiens] 40 0.001
gi|62821790 leucine zipper protein 2 [Homo sapiens] 40 0.001
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 39 0.002
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 39 0.002
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 39 0.002
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 39 0.002
gi|52627149 telomeric repeat binding factor 2, interacting prote... 38 0.003
gi|14195597 protein phosphatase 1, regulatory (inhibitor) subuni... 38 0.003
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit... 38 0.003
gi|126362971 serine/threonine kinase 10 [Homo sapiens] 38 0.004
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 37 0.007
gi|14195599 protein phosphatase 1, regulatory (inhibitor) subuni... 37 0.007
gi|154354979 myosin X [Homo sapiens] 36 0.012
gi|4758650 kinesin family member 5C [Homo sapiens] 35 0.021
gi|217416374 hypothetical protein LOC92749 [Homo sapiens] 35 0.021
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 35 0.027
gi|116812573 CWC15 homolog [Homo sapiens] 35 0.036
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 35 0.036
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 34 0.061
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 34 0.061
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 33 0.080
gi|110347568 centrosomal protein 152kDa [Homo sapiens] 33 0.080
>gi|31795561 complexin 4 [Homo sapiens]
Length = 160
Score = 317 bits (813), Expect = 2e-87
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD
Sbjct: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDK 120
AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDK
Sbjct: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDK 120
Query: 121 DSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKCSVM 160
DSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKCSVM
Sbjct: 121 DSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKCSVM 160
>gi|71725345 complexin 3 [Homo sapiens]
Length = 158
Score = 194 bits (492), Expect = 4e-50
Identities = 98/160 (61%), Positives = 128/160 (80%), Gaps = 2/160 (1%)
Query: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
MAF++K+M+ Q+KNL G E+K +G S A AQGM+REEYEEYQKQ++EEKMERD
Sbjct: 1 MAFMVKTMVGGQLKNLTGSLGGGEDKGDGDKS-AAEAQGMSREEYEEYQKQLVEEKMERD 59
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDK 120
A FTQ+KAERA LR H R+KYRLPK+E DE+QIQMAG DV+LP +L KM++ED EEEE+K
Sbjct: 60 AQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDVELPRELAKMIEEDTEEEEEK 119
Query: 121 DSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKCSVM 160
S+LGQ+ +L ++L ++K+KAQAT ++KQ+AE KC VM
Sbjct: 120 ASVLGQLASLPGLNLGSLKDKAQATLGDLKQSAE-KCHVM 158
>gi|5729781 complexin 1 [Homo sapiens]
Length = 134
Score = 48.5 bits (114), Expect = 2e-06
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
M F+MK + K++G G +E K DP AA+ + EE Q+ + + + ER
Sbjct: 1 MEFVMKQALGGATKDMGKMLGGDEEK------DPDAAK-----KEEERQEALRQAEEERK 49
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGD-----DVDLPEDLRKMVDEDQE 115
A + + +AER +R +R+KY + K E E + Q A + + P+ D+
Sbjct: 50 AKYAKMEAEREAVRQGIRDKYGIKKKEEREAEAQAAMEANSEGSLTRPKKAIPPGCGDEV 109
Query: 116 EEEDKDSILGQIQNLQNMDLDTIKE 140
EEED+ + I+ L D +K+
Sbjct: 110 EEEDESILDTVIKYLPGPLQDMLKK 134
>gi|56550065 complexin 2 [Homo sapiens]
Length = 134
Score = 47.0 bits (110), Expect = 7e-06
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
M F+MK + K++G G EE K DP A +++ EE Q+ + +++ ER
Sbjct: 1 MDFVMKQALGGATKDMGKMLGGEEEK------DPDA-----QKKEEERQEALRQQEEERK 49
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGD-----DVDLPEDLRKMVDEDQE 115
A + +AER +R +R+KY L K E E + + A + + P+ D+E
Sbjct: 50 AKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEE 109
Query: 116 EEEDKDSILGQI 127
EEE+ +SIL +
Sbjct: 110 EEEE-ESILDTV 120
>gi|5729783 complexin 2 [Homo sapiens]
Length = 134
Score = 47.0 bits (110), Expect = 7e-06
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 1 MAFLMKSMISNQVKNLGFGGGSEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
M F+MK + K++G G EE K DP A +++ EE Q+ + +++ ER
Sbjct: 1 MDFVMKQALGGATKDMGKMLGGEEEK------DPDA-----QKKEEERQEALRQQEEERK 49
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGD-----DVDLPEDLRKMVDEDQE 115
A + +AER +R +R+KY L K E E + + A + + P+ D+E
Sbjct: 50 AKHARMEAEREKVRQQIRDKYGLKKKEEKEAEEKAALEQPCEGSLTRPKKAIPAGCGDEE 109
Query: 116 EEEDKDSILGQI 127
EEE+ +SIL +
Sbjct: 110 EEEE-ESILDTV 120
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 40.4 bits (93), Expect = 7e-04
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 3 FLMKSMISNQVKNLGFGGGSEENKEE--GGASDPAAAQGMTREEYEEYQKQMIEEKMERD 60
F +K+ +++L +N +E ++ + G T E E+ +KQ+ EKME
Sbjct: 1482 FKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQLEAEKMELQ 1541
Query: 61 AAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDK 120
+A + +A E+ ++ +++++ NQI+ E RK+ ++D+E E+ K
Sbjct: 1542 SALEEAEASLE------HEEGKILRAQLEFNQIK--------AEIERKLAEKDEEMEQAK 1587
Query: 121 DSILGQIQNLQ-NMDLDT--------IKEKAQATFTEIK 150
+ L + +LQ ++D +T +K+K + E++
Sbjct: 1588 RNHLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEME 1626
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 89 DENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTE 148
DEN + D+ KM +E++EEEE+++S+ G ++N++ DT +EK + F++
Sbjct: 698 DENPTEEGADNSSA-----KMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSK 752
Query: 149 IKQTAEQKCSV 159
+ + CS+
Sbjct: 753 VGTV--KSCSI 761
>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 89 DENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTE 148
DEN + D+ KM +E++EEEE+++S+ G ++N++ DT +EK + F++
Sbjct: 698 DENPTEEGADNSSA-----KMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSK 752
Query: 149 IKQTAEQKCSV 159
+ + CS+
Sbjct: 753 VGTV--KSCSI 761
>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 39.7 bits (91), Expect = 0.001
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 89 DENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTE 148
DEN + D+ KM +E++EEEE+++S+ G ++N++ DT +EK + F++
Sbjct: 698 DENPTEEGADNSSA-----KMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSK 752
Query: 149 IKQTAEQKCSV 159
+ + CS+
Sbjct: 753 VGTV--KSCSI 761
>gi|62821790 leucine zipper protein 2 [Homo sapiens]
Length = 346
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 41 TREEYEEYQKQMIEEKMERDA---AFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAG 97
TR++YEE +KQ+ E ER T+ E ++V+L+ +
Sbjct: 20 TRQDYEELEKQLKEVFKERSTILRQLTKTSRELDGIKVNLQ---------------SLKN 64
Query: 98 DDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQKC 157
D+ D++K+++ Q++ E+ S+ +QN Q + EK QAT +K E+K
Sbjct: 65 DEQSAKTDVQKLLELGQKQREEMKSLQEALQN-QLKETSEKAEKHQATINFLKTEVERKS 123
Query: 158 SVM 160
++
Sbjct: 124 KMI 126
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 33 DPAAAQGMTREEYEE----YQKQMIEEKMERDAA---FTQKKAERACLRVHLREKYRLPK 85
D A Q R + E+ +K + EE +A QK A+ E+++ K
Sbjct: 1160 DSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAK 1219
Query: 86 SEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQ 143
+ +D+N+ + ++ DL +LR + QE E K + Q+Q LQ+ D + +A+
Sbjct: 1220 ANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAE 1277
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 33 DPAAAQGMTREEYEE----YQKQMIEEKMERDAA---FTQKKAERACLRVHLREKYRLPK 85
D A Q R + E+ +K + EE +A QK A+ E+++ K
Sbjct: 1167 DSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAK 1226
Query: 86 SEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQ 143
+ +D+N+ + ++ DL +LR + QE E K + Q+Q LQ+ D + +A+
Sbjct: 1227 ANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAE 1284
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 33 DPAAAQGMTREEYEE----YQKQMIEEKMERDAA---FTQKKAERACLRVHLREKYRLPK 85
D A Q R + E+ +K + EE +A QK A+ E+++ K
Sbjct: 1167 DSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAK 1226
Query: 86 SEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQ 143
+ +D+N+ + ++ DL +LR + QE E K + Q+Q LQ+ D + +A+
Sbjct: 1227 ANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAE 1284
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 38.9 bits (89), Expect = 0.002
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 33 DPAAAQGMTREEYEE----YQKQMIEEKMERDAA---FTQKKAERACLRVHLREKYRLPK 85
D A Q R + E+ +K + EE +A QK A+ E+++ K
Sbjct: 1160 DSTATQQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAK 1219
Query: 86 SEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQ 143
+ +D+N+ + ++ DL +LR + QE E K + Q+Q LQ+ D + +A+
Sbjct: 1220 ANLDKNKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSDGERARAE 1277
>gi|52627149 telomeric repeat binding factor 2, interacting protein
[Homo sapiens]
Length = 399
Score = 38.1 bits (87), Expect = 0.003
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 22 SEENKEEGGASDPAAAQGMTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKY 81
+EE+ E + +P + E EEY K+ I+E E +K A E+
Sbjct: 213 AEEDPEAADSGEPQNKRTPDLPE-EEYVKEEIQENEEA----VKKMLVEATREF---EEV 264
Query: 82 RLPKSEMD-ENQIQMAGDDVDLP-EDLRKMVDEDQEEEEDKDS---------ILGQIQNL 130
+ +S D E I M DD P ED DE++EEEE+K S I+ Q+
Sbjct: 265 VVDESPPDFEIHITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEK 324
Query: 131 QNMDLDTIKEKAQATFTEIKQTA 153
N+DL T+ + E++ T+
Sbjct: 325 FNLDLSTVTQAFLKNSGELEATS 347
>gi|14195597 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform c [Homo sapiens]
Length = 208
Score = 38.1 bits (87), Expect = 0.003
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 29/152 (19%)
Query: 21 GSEENKE---------EGGASDPAA-------AQGMTREEYEEYQKQMIEEKMERDAAFT 64
GSEE KE E G S+P A R E E + + ++E D+
Sbjct: 48 GSEEVKETWHERLSRLESGGSNPTTSDSYGDRASARARREAREARLATLTSRVEEDSNRD 107
Query: 65 QKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSIL 124
KK + L E +L K+++ E Q+++A D+ L K+ + QE+ D+ S+L
Sbjct: 108 YKKLYESALT----ENQKL-KTKLQEAQLELA----DIKSKLEKVAQQKQEKTSDRSSVL 158
Query: 125 GQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
++ + ++ K E+K E K
Sbjct: 159 ----EMEKRERRALERKMSEMEEEMKVLTELK 186
>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform a [Homo sapiens]
Length = 982
Score = 38.1 bits (87), Expect = 0.003
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 29/152 (19%)
Query: 21 GSEENKE---------EGGASDPAA-------AQGMTREEYEEYQKQMIEEKMERDAAFT 64
GSEE KE E G S+P A R E E + + ++E D+
Sbjct: 822 GSEEVKETWHERLSRLESGGSNPTTSDSYGDRASARARREAREARLATLTSRVEEDSNRD 881
Query: 65 QKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSIL 124
KK + L E +L K+++ E Q+++A D+ L K+ + QE+ D+ S+L
Sbjct: 882 YKKLYESALT----ENQKL-KTKLQEAQLELA----DIKSKLEKVAQQKQEKTSDRSSVL 932
Query: 125 GQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
++ + ++ K E+K E K
Sbjct: 933 ----EMEKRERRALERKMSEMEEEMKVLTELK 960
>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
Length = 968
Score = 37.7 bits (86), Expect = 0.004
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 30/130 (23%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMA----- 96
RE+ + Y ++MIE+ R +EK RLPK + E + +MA
Sbjct: 781 REQMQRYNQRMIEQLKVRQQ----------------QEKARLPKIQRSEGKTRMAMYKKS 824
Query: 97 ------GDDVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIK 150
G + E +++ QEE+ K L Q Q +N D + + ++ +E++
Sbjct: 825 LHINGGGSAAEQREKIKQF--SQQEEKRQKSERLQQQQKHENQMRDMLAQ-CESNMSELQ 881
Query: 151 QTAEQKCSVM 160
Q +KC ++
Sbjct: 882 QLQNEKCHLL 891
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 37.0 bits (84), Expect = 0.007
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 21 GSEENKE---------EGGASDPAA-------AQGMTREEYEEYQKQMIEEKMERDAAFT 64
GSEE KE E G S+P A R E E + + ++E D+
Sbjct: 822 GSEEVKETWHERLSRLESGGSNPTTSDSYGDRASARARREAREARLATLTSRVEEDSNRD 881
Query: 65 QKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSIL 124
KK + L E +L K+++ E Q+++A D+ L K+ + QE+ D+ S+L
Sbjct: 882 YKKLYESALT----ENQKL-KTKLQEAQLELA----DIKSKLEKVAQQKQEKTSDRSSVL 932
>gi|14195599 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform d [Homo sapiens]
Length = 224
Score = 37.0 bits (84), Expect = 0.007
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 21 GSEENKE---------EGGASDPAA-------AQGMTREEYEEYQKQMIEEKMERDAAFT 64
GSEE KE E G S+P A R E E + + ++E D+
Sbjct: 48 GSEEVKETWHERLSRLESGGSNPTTSDSYGDRASARARREAREARLATLTSRVEEDSNRD 107
Query: 65 QKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPEDLRKMVDEDQEEEEDKDSIL 124
KK + L E +L K+++ E Q+++A D+ L K+ + QE+ D+ S+L
Sbjct: 108 YKKLYESALT----ENQKL-KTKLQEAQLELA----DIKSKLEKVAQQKQEKTSDRSSVL 158
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 36.2 bits (82), Expect = 0.012
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAER--ACLRVHLREKYRLPKSEMDENQIQMAGDD 99
+ E EE +KQ EEK +R+ +++ ER A LR E+ R + + +Q + +
Sbjct: 815 KREQEEKKKQEEEEKKKREEEERERERERREAELRAQQEEETR---KQQELEALQKSQKE 871
Query: 100 VDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTE 148
+L +L K Q+E + + IL + ++ DL +KE+ + + TE
Sbjct: 872 AELTRELEK-----QKENKQVEEILRLEKEIE--DLQRMKEQQELSLTE 913
>gi|4758650 kinesin family member 5C [Homo sapiens]
Length = 957
Score = 35.4 bits (80), Expect = 0.021
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 40 MTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDD 99
+TR + E K+ +E++ME QK+ R LR + EK ++ D NQ ++ +
Sbjct: 690 LTRLQDAEEMKKALEQQMESHREAHQKQLSR--LRDEIEEKQKIIDEIRDLNQ-KLQLEQ 746
Query: 100 VDLPEDLRKMVDEDQEEEEDKDSIL 124
L D K+ EDQE E + +L
Sbjct: 747 EKLSSDYNKLKIEDQEREMKLEKLL 771
>gi|217416374 hypothetical protein LOC92749 [Homo sapiens]
Length = 740
Score = 35.4 bits (80), Expect = 0.021
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKS---EMDENQIQMAGD 98
R E EE ++Q IE K+E + +Q K + + ++ R+P+ ++ Q+ AG
Sbjct: 109 RVEEEEIKRQRIE-KLENEVKTSQDKFDEITSKWEEGKQKRIPQELWEMLNTQQLHCAG- 166
Query: 99 DVDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
L ED K++ E Q+E + KD + Q+ D+ + E+ + + +T ++
Sbjct: 167 ---LLEDKNKLISELQQELKTKDDQYVKDLKKQSDDICLLLERMEEQVKNVMKTFREE 221
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 35.0 bits (79), Expect = 0.027
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERA--CLRVHLREKYRLPKSEMDENQIQMAGDD 99
R QK+ I K + ++ +QK R RVH R RL SE +E+ + +D
Sbjct: 1204 RRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKR---RLSSSESEESYLSKNSED 1260
Query: 100 VDLPEDLRKMV-------------DEDQEEEEDKDS 122
+L ++ ++ V DE++EEEE K S
Sbjct: 1261 DELAKESKRSVRKRGRSTDEYSEADEEEEEEEGKPS 1296
>gi|116812573 CWC15 homolog [Homo sapiens]
Length = 229
Score = 34.7 bits (78), Expect = 0.036
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 41 TREEYEEYQKQMIEEKME-RDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDD 99
T++ EE + + ++E R+ A ++K R H K +D QI A D
Sbjct: 47 TQDAPEEVRNRDFRRELEERERAAAREKNRDRPTREHTTSSSVSKKPRLD--QIPAANLD 104
Query: 100 VDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
D P L DED EEE D D + L+ + + +E+A+ E +Q AE++
Sbjct: 105 ADDP--LTDEEDEDFEEESDDDDTAALLAELEKIKKERAEEQAR---KEQEQKAEEE 156
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 34.7 bits (78), Expect = 0.036
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVD 101
RE E +++ E + ERD +++ ER R H R+K R + E E + + D+ D
Sbjct: 406 RERERENRQRERERERERDRERERRQREREREREHERDKERQRRKEEWERE-RAKRDEKD 464
Query: 102 LPEDLRKMVDEDQEEEEDKDSILGQIQNLQ--NMDLDTIKEKAQATFTEIKQTAEQK 156
R+ D D+E+E +K+ + ++ Q + + K++A T ++K+ E K
Sbjct: 465 -----RQHRDRDREKEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWK 516
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 33.9 bits (76), Expect = 0.061
Identities = 24/117 (20%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 40 MTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDD 99
+ +EE E ++++++K E + +K AE L RE+ R + ++ + + +
Sbjct: 651 LQQEEEERRHQELLQKKKEEEQERLRKAAEAKRL-AEQREQERREQERREQERREQERRE 709
Query: 100 VDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
+ E R++ ++++ E+++ ++Q + L KE+ Q E K+ EQ+
Sbjct: 710 QERREQERQLAEQERRREQERLQAERELQEREKA-LRLQKEQLQRELEEKKKKEEQQ 765
Score = 28.9 bits (63), Expect = 2.0
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 43 EEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDL 102
E+ +E +K+ IE+K + T+K E ++K K E E + +
Sbjct: 589 EQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQ------- 641
Query: 103 PEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
E+ R++ QEEEE + L +Q + + + +++ A+A K+ AEQ+
Sbjct: 642 EEEARRLRWLQQEEEERRHQEL--LQKKKEEEQERLRKAAEA-----KRLAEQR 688
Score = 28.9 bits (63), Expect = 2.0
Identities = 14/79 (17%), Positives = 39/79 (49%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVD 101
+E E+ +++ + ER A +++ E+ L+ + R + + Q+Q ++
Sbjct: 700 QERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKK 759
Query: 102 LPEDLRKMVDEDQEEEEDK 120
E+ +++ + +EE++K
Sbjct: 760 KKEEQQRLAERQLQEEQEK 778
Score = 26.6 bits (57), Expect = 9.8
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 42 REEYEEYQKQMIEE-KMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDV 100
+EE E+ ++Q +EE K R K+ ER + RE+ K E + QI+ +
Sbjct: 548 KEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEE-KKKQIEQKFAQI 606
Query: 101 DLPEDLRKMVDEDQEEEEDK 120
D E K +E EE+ K
Sbjct: 607 D--EKTEKAKEERLAEEKAK 624
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 33.9 bits (76), Expect = 0.061
Identities = 24/117 (20%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 40 MTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDD 99
+ +EE E ++++++K E + +K AE L RE+ R + ++ + + +
Sbjct: 647 LQQEEEERRHQELLQKKKEEEQERLRKAAEAKRL-AEQREQERREQERREQERREQERRE 705
Query: 100 VDLPEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
+ E R++ ++++ E+++ ++Q + L KE+ Q E K+ EQ+
Sbjct: 706 QERREQERQLAEQERRREQERLQAERELQEREKA-LRLQKEQLQRELEEKKKKEEQQ 761
Score = 28.9 bits (63), Expect = 2.0
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 14/114 (12%)
Query: 43 EEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDL 102
E+ +E +K+ IE+K + T+K E ++K K E E + +
Sbjct: 585 EQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQ------- 637
Query: 103 PEDLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
E+ R++ QEEEE + L +Q + + + +++ A+A K+ AEQ+
Sbjct: 638 EEEARRLRWLQQEEEERRHQEL--LQKKKEEEQERLRKAAEA-----KRLAEQR 684
Score = 28.9 bits (63), Expect = 2.0
Identities = 14/79 (17%), Positives = 39/79 (49%)
Query: 42 REEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVD 101
+E E+ +++ + ER A +++ E+ L+ + R + + Q+Q ++
Sbjct: 696 QERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQLQRELEEKK 755
Query: 102 LPEDLRKMVDEDQEEEEDK 120
E+ +++ + +EE++K
Sbjct: 756 KKEEQQRLAERQLQEEQEK 774
Score = 26.6 bits (57), Expect = 9.8
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 42 REEYEEYQKQMIEE-KMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDV 100
+EE E+ ++Q +EE K R K+ ER + RE+ K E + QI+ +
Sbjct: 544 KEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEE-KKKQIEQKFAQI 602
Query: 101 DLPEDLRKMVDEDQEEEEDK 120
D E K +E EE+ K
Sbjct: 603 D--EKTEKAKEERLAEEKAK 620
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 33.5 bits (75), Expect = 0.080
Identities = 20/84 (23%), Positives = 41/84 (48%)
Query: 38 QGMTREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAG 97
+G +E +E +K+ E + ER+ +++ ER R REK + + E + ++ +
Sbjct: 295 KGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDRT 354
Query: 98 DDVDLPEDLRKMVDEDQEEEEDKD 121
+ D D + D D+E D++
Sbjct: 355 KERDRDRDRERDRDRDRERSSDRN 378
Score = 29.6 bits (65), Expect = 1.2
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 46 EEYQKQMIE-EKMERDAAFTQKKAERACLRVHLREKYRLPKSEMDENQIQMAGDDVDLPE 104
+E ++Q IE E+ ER+ +++ R R RE+ R + E + + + D
Sbjct: 298 KEKERQEIEKERRERERERERERERREREREREREREREKEKERERER------ERDRDR 351
Query: 105 DLRKMVDEDQEEEEDKDSILGQIQNLQNMDLDTIKEKAQATFTEIKQTAEQK 156
D K D D++ E D+D + + +N D +EK++ E ++ E++
Sbjct: 352 DRTKERDRDRDRERDRDRDRERSSD-RNKDRSRSREKSRDRERERERERERE 402
>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
Length = 1654
Score = 33.5 bits (75), Expect = 0.080
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 41 TREEYEEYQKQMIEEKMERDAAFTQKKAERACLRVHLREKYRLPK-----SEMDENQIQM 95
T +++ E K I E + A +++ A R HL+ + L K + + E +++
Sbjct: 677 TYQQHHEAMKTQIRESLLAKHALEKQQLFEAYERTHLQLRSELDKLNKEVTAVQECYLEV 736
Query: 96 AGDDVDLPEDLRKMVDEDQE-EEEDKDSILGQIQNLQNMDLD-TIKEKAQATFTEIKQT 152
+ +L LRK +++Q+ +E+ K+ ++ Q++ LD TIK + T QT
Sbjct: 737 CREKDNLELTLRKTTEKEQQTQEKIKEKLIQQLEKEWQSKLDQTIKAMKKKTLDCGSQT 795
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,803,320
Number of Sequences: 37866
Number of extensions: 274044
Number of successful extensions: 3047
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 315
Number of HSP's that attempted gapping in prelim test: 2433
Number of HSP's gapped (non-prelim): 789
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.