Guide to the Human Genome
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Name: N4BP2 Sequence: fasta or formatted (1770aa) NCBI GI: 31742492
Description:

Nedd4 binding protein 2

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         81           2
 C cysteine            1.8         31           2
 D aspartate           5.6         99           2
 E glutamate           9.7        172           3
 F phenylalanine       4.0         71           1
 G glycine             4.4         77           2
 H histidine           2.3         40           1
 I isoleucine          4.3         76           3
 K lysine              8.1        143           2
 L leucine             9.2        163           3
 M methionine          2.4         43           1
 N asparagine          5.8        103           3
 P proline             5.5         97           7
 Q glutamine           4.3         76           2
 R arginine            3.1         54           3
 S serine             10.9        193           3
 T threonine           5.6        100           3
 V valine              5.6         99           3
 W tryptophan          0.8         14           2
 Y tyrosine            2.1         38           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nedd4 binding protein 2 
N4BP2L2               0.045   phosphonoformate immuno-associated protein 5 isoform ...
N4BP2L1               0.045   NEDD4 binding protein 2-like 1 isoform 1 
N4BP2L1               0.027   NEDD4 binding protein 2-like 1 isoform 2 
N4BP2L2               0.025   phosphonoformate immuno-associated protein 5 isofor...
CNP                   0.009   2',3'-cyclic nucleotide 3' phosphodiesterase 
YLPM1                 0.007   YLP motif containing 1 
SETD1B                0.006   SET domain containing 1B 
TTN                   0.005   titin isoform novex-3 
DSPP                  0.005   dentin sialophosphoprotein preproprotein 
FAM133A               0.004   hypothetical protein LOC286499 
MAP1A                 0.003   microtubule-associated protein 1A 
KIAA2018              0.003   hypothetical protein LOC205717 
PDE4D                 0.003   phosphodiesterase 4D isoform 1 
DAAM1                 0.003   dishevelled-associated activator of morphogenesis 1 ...
TRRAP                 0.003   transformation/transcription domain-associated protei...
CHD1                  0.003   chromodomain helicase DNA binding protein 1 
SFRS2IP               0.003   splicing factor, arginine/serine-rich 2, interactin...
PRR22                 0.003   proline rich 22 isoform 1 
PRR22                 0.003   proline rich 22 isoform 2 
MGAM                  0.003   maltase-glucoamylase 
WDR44                 0.003   WD repeat domain 44 protein 
MAMLD1                0.003   mastermind-like domain containing 1 
TTF1                  0.003   transcription termination factor, RNA polymerase I [...
C6orf132              0.003   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.003   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.003   PREDICTED: hypothetical protein LOC647024 
VPS4B                 0.003   vacuolar protein sorting factor 4B 
JMY                   0.003   junction-mediating and regulatory protein 
ARHGEF1               0.003   Rho guanine nucleotide exchange factor 1 isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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