TTF1 26111

Name: TTF1	Sequence: fasta or formatted (905aa)		NCBI GI: 33356179
Description: transcription termination factor, RNA polymerase I		Referenced in: PHD Finger Proteins RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 59 2 C cysteine 0.9 8 1 D aspartate 5.0 45 2 E glutamate 9.9 90 2 F phenylalanine 2.8 25 1 G glycine 5.1 46 2 H histidine 2.3 21 1 I isoleucine 4.3 39 2 K lysine 13.1 119 7 L leucine 6.5 59 2 M methionine 2.2 20 2 N asparagine 3.4 31 2 P proline 4.1 37 2 Q glutamine 4.2 38 1 R arginine 5.7 52 2 S serine 9.6 87 2 T threonine 4.8 43 2 V valine 5.6 51 2 W tryptophan 1.2 11 1 Y tyrosine 2.7 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription termination factor, RNA polymerase I [... DMTF1 0.049 cyclin D binding myb-like transcription factor 1 is... DMTF1 0.049 cyclin D binding myb-like transcription factor 1 is... DMTF1 0.049 cyclin D binding myb-like transcription factor 1 is... AP3D1 0.023 adaptor-related protein complex 3, delta 1 subunit ... AP3D1 0.019 adaptor-related protein complex 3, delta 1 subunit ... TRDN 0.016 triadin BOD1L 0.014 biorientation of chromosomes in cell division 1-like... RFC1 0.014 replication factor C large subunit SRRM2 0.013 splicing coactivator subunit SRm300 FAM133B 0.012 hypothetical protein LOC257415 isoform 2 FAM133B 0.012 hypothetical protein LOC257415 isoform 1 GPATCH4 0.012 G patch domain containing 4 isoform 2 GPATCH4 0.012 G patch domain containing 4 isoform 1 ZC3H13 0.012 zinc finger CCCH-type containing 13 SFRS4 0.012 splicing factor, arginine/serine-rich 4 ANKRD12 0.012 ankyrin repeat domain 12 isoform 2 ANKRD12 0.012 ankyrin repeat domain 12 isoform 1 CHD7 0.011 chromodomain helicase DNA binding protein 7 CYLC1 0.011 cylicin, basic protein of sperm head cytoskeleton 1... C16orf88 0.011 hypothetical protein LOC400506 GPATCH8 0.011 G patch domain containing 8 FAM133A 0.011 hypothetical protein LOC286499 WDR87 0.011 NYD-SP11 protein CYLC2 0.011 cylicin 2 TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform a ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.