Guide to the Human Genome
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Name: CNP Sequence: fasta or formatted (421aa) NCBI GI: 94721261
Description:

2',3'-cyclic nucleotide 3' phosphodiesterase

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         28           2
 C cysteine            1.7          7           1
 D aspartate           5.9         25           2
 E glutamate           7.1         30           2
 F phenylalanine       4.8         20           2
 G glycine             8.1         34           2
 H histidine           1.2          5           1
 I isoleucine          2.9         12           2
 K lysine              9.3         39           2
 L leucine            11.9         50           2
 M methionine          1.7          7           1
 N asparagine          1.7          7           1
 P proline             4.5         19           2
 Q glutamine           4.8         20           2
 R arginine            6.7         28           3
 S serine              5.7         24           3
 T threonine           6.2         26           2
 V valine              5.0         21           2
 W tryptophan          1.2          5           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   2',3'-cyclic nucleotide 3' phosphodiesterase 
N4BP2L1               0.048   NEDD4 binding protein 2-like 1 isoform 1 
N4BP2L2               0.042   phosphonoformate immuno-associated protein 5 isoform ...
N4BP2                 0.036   Nedd4 binding protein 2 
N4BP2L1               0.023   NEDD4 binding protein 2-like 1 isoform 2 
PFKFB2                0.015   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...
PFKFB2                0.015   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...
N4BP2L2               0.011   phosphonoformate immuno-associated protein 5 isofor...
AK5                   0.010   adenylate kinase 5 isoform 1 
AK5                   0.010   adenylate kinase 5 isoform 2 
KATNAL2               0.010   katanin p60 subunit A-like 2 
YLPM1                 0.010   YLP motif containing 1 
PFKFB4                0.010   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4...
TUBE1                 0.008   tubulin, epsilon 1 
TDRD9                 0.007   tudor domain containing 9 
TRIM69                0.007   tripartite motif-containing 69 isoform b 
TRIM69                0.007   tripartite motif-containing 69 isoform a 
AKD1                  0.007   adenylate kinase domain containing 1 isoform 1 [Hom...
AKD1                  0.007   adenylate kinase domain containing 1 isoform 2 [Homo...
MAP3K9                0.006   mitogen-activated protein kinase kinase kinase 9 [Ho...
ANO2                  0.006   anoctamin 2 
VPS33A                0.006   vacuolar protein sorting 33A 
PFKFB1                0.005   6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...
DCP1A                 0.005   DCP1 decapping enzyme homolog A 
ABCE1                 0.005   ATP-binding cassette, sub-family E, member 1 
ABCE1                 0.005   ATP-binding cassette, sub-family E, member 1 
TPH1                  0.005   tryptophan hydroxylase 1 
SIRT1                 0.005   sirtuin 1 isoform a 
LEPREL2               0.005   leprecan-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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