Guide to the Human Genome
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Search of human proteins with 31657096

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ...   409   e-114
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ...   409   e-114
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H...    95   4e-20
gi|19923929 CKLF-like MARVEL transmembrane domain containing 7 i...    66   2e-11
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [...    57   1e-08
gi|7705755 plasmolipin [Homo sapiens]                                  54   7e-08
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ...    54   9e-08
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [...    54   1e-07
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]        48   7e-06
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]         48   7e-06
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]         48   7e-06
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]         48   7e-06
gi|16418397 MAL2 proteolipid protein [Homo sapiens]                    45   4e-05
gi|4505091 T-lymphocyte maturation-associated protein isoform a ...    42   5e-04
gi|31657099 CKLF-like MARVEL transmembrane domain containing 7 i...    38   0.007
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom...    35   0.059
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]         32   0.38 
gi|12408663 T-lymphocyte maturation-associated protein isoform c...    32   0.50 
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom...    32   0.50 
gi|27477113 sterol regulatory element-binding transcription fact...    31   0.65 
gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]        31   0.65 
gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens]     31   0.65 
gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens]                   31   0.85 
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ...    31   0.85 
gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens]                   30   1.5  
gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens]                   30   1.5  
gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo...    30   1.9  
gi|130978359 tectonic family member 1 isoform 1 [Homo sapiens]         29   2.5  
gi|130978357 tectonic family member 1 isoform 2 [Homo sapiens]         29   2.5  
gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens]          29   2.5  

>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
           sapiens]
          Length = 208

 Score =  409 bits (1050), Expect = e-114
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
           MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA
Sbjct: 1   MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60

Query: 61  QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
           QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL
Sbjct: 61  QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120

Query: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
           TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR
Sbjct: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180

Query: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208
           QQSTNDYIRARTESRDVDSRPEIQRLDT
Sbjct: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208


>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
           sapiens]
          Length = 234

 Score =  409 bits (1050), Expect = e-114
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
           MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA
Sbjct: 1   MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60

Query: 61  QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
           QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL
Sbjct: 61  QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120

Query: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
           TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR
Sbjct: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180

Query: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208
           QQSTNDYIRARTESRDVDSRPEIQRLDT
Sbjct: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208


>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
           sapiens]
          Length = 183

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 6/173 (3%)

Query: 27  YQPTTE--PVSQRRGLAGLRCDPDYLRGALGR--LKVAQVILALIAFICIETIMACSPCE 82
           Y PTTE  P   R   +GL       R  L R  LK  Q++L+L+AFIC E +  C+ C 
Sbjct: 7   YSPTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGLQLLLSLLAFICEEVVSQCTLCG 66

Query: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
           GLYFFEFVSCSAF+++ ++LI++    + R+       +D   T  +  +F +ASI+  +
Sbjct: 67  GLYFFEFVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGCVFLLASIIFVS 126

Query: 143 LNHRAGAEIAAVIFGFLATAAYAVN--TFLAVQKWRVSVRQQSTNDYIRARTE 193
            + R  AEIAA++FGF+A+  + ++  T L  ++    +R+        A TE
Sbjct: 127 THDRTSAEIAAIVFGFIASFMFLLDFITMLYEKRQESQLRKPENTTRAEALTE 179


>gi|19923929 CKLF-like MARVEL transmembrane domain containing 7
           isoform a [Homo sapiens]
          Length = 175

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%)

Query: 15  SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIET 74
           SS S +   +   QP+  P      L GL  D  Y R     LKVAQ++  LIAFIC+ +
Sbjct: 13  SSGSALGPGAGAAQPSASP------LEGL-LDLSYPRTHAALLKVAQMVTLLIAFICVRS 65

Query: 75  IMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFF 134
            +  +     YF     C   ++    L+      +  +  I+W L++L++  +   L  
Sbjct: 66  SLWTNYSAYSYFEVVTICDLIMILAFYLVHL-FRFYRVLTCISWPLSELLHYLIGTLLLL 124

Query: 135 IASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTN 185
           IASIV A+ ++     +A  IFGF+AT     + +L+   +++S   QST+
Sbjct: 125 IASIVAASKSYNQSGLVAGAIFGFMATFLCMASIWLS---YKISCVTQSTD 172


>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
           [Homo sapiens]
          Length = 173

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)

Query: 46  DPDYLRGALGRLKVAQVILALIAFICIE-TIMACSPCEGLYFFEFVSCSAFVVTGVLLIM 104
           D ++LR   G L VA+++L L+ +  I  T     P  G  +  FV+   +V+T   LI+
Sbjct: 33  DREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFG--WVMFVAVFYWVLTVFFLII 90

Query: 105 FSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL-------NHRAGAEIAAVIFG 157
           +    + RIPQ+ W    L   G SAF+ ++++ V+ A        +H   +  A+  F 
Sbjct: 91  YITMTYTRIPQVPWTTVGLCFNG-SAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFA 149

Query: 158 FLATAAYAVNTFLAVQKWR 176
           FL T  YA NT+ +   WR
Sbjct: 150 FLVTICYAGNTYFSFIAWR 168


>gi|7705755 plasmolipin [Homo sapiens]
          Length = 182

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 23/171 (13%)

Query: 23  ASSPYQPTTEPVSQRRG----LAGLRCDPDYLRGALGRLKVAQVILALIAFICI-ETIMA 77
           A  P + +T   S  +G    ++ LR D  ++R  LG L + Q++L L+ +  I +T   
Sbjct: 2   AEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLVLGLLVWALIADTPYH 61

Query: 78  CSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIAS 137
             P  G  +  FV+   ++VT VL  ++   LHM++  + W L  ++    +  L+  A 
Sbjct: 62  LYPAYG--WVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISATVLYITAF 119

Query: 138 IVLAA------------LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
           I  +A             N RA    AA  F  L   AY V+ F + Q WR
Sbjct: 120 IACSAAVDLTSLRGTRPYNQRA----AASFFACLVMIAYGVSAFFSYQAWR 166


>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
           sapiens]
          Length = 156

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)

Query: 40  LAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTG 99
           L G   D  +L    G L   ++ L LI FIC    ++      L          F +T 
Sbjct: 20  LQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYMAAALL--------EFFITL 71

Query: 100 VLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFL 159
             L +++   + R  +INW   D +    +  +F + S   AA+  R GA IAA +FG +
Sbjct: 72  AFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSF--AAVTSRDGAAIAAFVFGII 129

Query: 160 ATAAYAVNTF 169
             + +A + F
Sbjct: 130 LVSIFAYDAF 139


>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
           [Homo sapiens]
          Length = 152

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 13/125 (10%)

Query: 48  DYLRGALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSL 107
           ++ R   G L  A++IL L+  IC     A +P      +  +S    ++  +  +++  
Sbjct: 18  NFSRTRKGILLFAEIILCLVILICFS---ASTPG-----YSSLSVIEMILAAIFFVVYMC 69

Query: 108 NLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL--NHRAGAEIAAVIFGFLATAAYA 165
           +LH +IP INW  +D   T ++A L+ I SIV+     NH   ++I A + G +AT  + 
Sbjct: 70  DLHTKIPFINWPWSDFFRTLIAAILYLITSIVVLVERGNH---SKIVAGVLGLIATCLFG 126

Query: 166 VNTFL 170
            + ++
Sbjct: 127 YDAYV 131


>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66

Query: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121

Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179


>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66

Query: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121

Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179


>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66

Query: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121

Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179


>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 29  PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
           P  EP    R      GL  L     +L    GRL +A+  L+ I FIC     A +   
Sbjct: 10  PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66

Query: 83  GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
               F       F++    L   ++ L+ +   + W + D +    +A ++F  SI  A 
Sbjct: 67  ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121

Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
             +  GA  AA +FGF AT  +A + +L        ++Q  + D   A +TE  + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179


>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
          Length = 176

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 25/179 (13%)

Query: 19  MISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMAC 78
           M +G +S   P    VS       L   PD LR   G     +++   + +I + +    
Sbjct: 1   MSAGGASVPPPPNPAVSFPPPRVTLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVP 60

Query: 79  SPC-EGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIAS 137
            P  +G  +  FVS +AF  + + L MF   +  +I   NWN  D      + F+F+  +
Sbjct: 61  LPLLQG--WVMFVSVTAFFFSLLFLGMFLSGMVAQI-DANWNFLDFAYH-FTVFVFYFGA 116

Query: 138 IVLAAL--------------------NHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
            +L A                     +++    +AA IF F+ TA Y  +  LA+++WR
Sbjct: 117 FLLEAAATSLHDLHCNTTITGQPLLSDNQYNINVAASIFAFMTTACYGCSLGLALRRWR 175


>gi|4505091 T-lymphocyte maturation-associated protein isoform a
           [Homo sapiens]
          Length = 153

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 89  FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV--LAALNHR 146
           FVS   FV T  L+I++ +  H    + +W   D      +A  +  AS++  LA +  +
Sbjct: 57  FVSVFCFVATTTLIILYIIGAHGG--ETSWVTLDAAYHCTAALFYLSASVLEALATITMQ 114

Query: 147 AG-------AEIAAVIFGFLATAAYAVNTFLAVQKWRVS 178
            G         IAAV+F ++AT  Y V+   ++ +W+ S
Sbjct: 115 DGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153


>gi|31657099 CKLF-like MARVEL transmembrane domain containing 7
           isoform b [Homo sapiens]
          Length = 142

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 11/127 (8%)

Query: 15  SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIET 74
           SS S +   +   QP+  P      L GL  D  Y R     LKVAQ++  LIAFIC+ +
Sbjct: 13  SSGSALGPGAGAAQPSASP------LEGL-LDLSYPRTHAALLKVAQMVTLLIAFICVRS 65

Query: 75  IMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFF 134
            +  +     YF     C   ++    L+      +  +  I+W L+     G  A    
Sbjct: 66  SLWTNYSAYSYFEVVTICDLIMILAFYLVHL-FRFYRVLTCISWPLSIF---GFMATFLC 121

Query: 135 IASIVLA 141
           +ASI L+
Sbjct: 122 MASIWLS 128


>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
           sapiens]
          Length = 286

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 10/129 (7%)

Query: 55  GRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIP 114
           G LK+ ++ L L A  C     A        F    S    +V   +LI + L LH  + 
Sbjct: 137 GMLKILRLSLILGALACFIITQANES-----FITITSLEICIVVFFILI-YVLTLHHLLT 190

Query: 115 QINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAY--AVNTFLAV 172
            ++W L DL N+ ++A   F++ + + A+  +    +  V      TA     ++ F+  
Sbjct: 191 YLHWPLLDLTNSIITA--VFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVT 248

Query: 173 QKWRVSVRQ 181
            K R ++++
Sbjct: 249 TKMRTNLKR 257


>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
          Length = 248

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 53  ALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMR 112
           +LG L  A ++L+ +    +  I+       + FF F            ++++S  +H  
Sbjct: 94  SLGCLIAAMILLSSLT---VHPILRLIITMEISFFSF-----------FILLYSFAIHRY 139

Query: 113 IPQINWNLTDLVNTGLSAFLFFIASIVLAALNHRA 147
           IP I W ++DL N  L A  F + ++V A  + R+
Sbjct: 140 IPFILWPISDLFN-DLIACAFLVGAVVFAVRSRRS 173


>gi|12408663 T-lymphocyte maturation-associated protein isoform c
           [Homo sapiens]
          Length = 97

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 10/60 (16%)

Query: 129 SAFLFFIASIVLAAL---------NHRAGAE-IAAVIFGFLATAAYAVNTFLAVQKWRVS 178
           +A LF++++ VL AL          +R   E IAAV+F ++AT  Y V+   ++ +W+ S
Sbjct: 38  TAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 97


>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
           sapiens]
          Length = 231

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)

Query: 55  GRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIP 114
           G LK+ ++ L L A  C     A        F    S    +V   +LI + L LH  + 
Sbjct: 137 GMLKILRLSLILGALACFIITQANES-----FITITSLEICIVVFFILI-YVLTLHHLLT 190

Query: 115 QINWNLTDLVNTGLSAFLFFIASIV 139
            ++W L DL N+ ++A    + +I+
Sbjct: 191 YLHWPLLDLTNSIITAVFLSVVAIL 215


>gi|27477113 sterol regulatory element-binding transcription factor
           2 [Homo sapiens]
          Length = 1141

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 15  SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICI 72
           +S S      SPY   +EP S     A ++ +PD    ALG +  ++++L ++ F+C+
Sbjct: 435 ASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCL 492


>gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]
          Length = 558

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 23/103 (22%)

Query: 97  VTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFI---ASIVLAALNHRAG----- 148
           +T +++++  ++++ R   ++ N   L   G++  LF +   A+IV     +R G     
Sbjct: 265 ITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYP 324

Query: 149 ---------------AEIAAVIFGFLATAAYAVNTFLAVQKWR 176
                           +IAA+IF F+    Y ++  + ++ WR
Sbjct: 325 LFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367


>gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens]
          Length = 457

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 23/103 (22%)

Query: 97  VTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFI---ASIVLAALNHRAG----- 148
           +T +++++  ++++ R   ++ N   L   G++  LF +   A+IV     +R G     
Sbjct: 265 ITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYP 324

Query: 149 ---------------AEIAAVIFGFLATAAYAVNTFLAVQKWR 176
                           +IAA+IF F+    Y ++  + ++ WR
Sbjct: 325 LFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367


>gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens]
          Length = 233

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 21/108 (19%)

Query: 91  SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
           +CS  V  GVL  +     L L +  PQI+         L+D+  +   AFL+F+    L
Sbjct: 67  ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 126

Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRV 177
           A            LN    A  AA+ F F +   +A    LA Q++++
Sbjct: 127 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQI 174


>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
           sapiens]
          Length = 169

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 86  FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNH 145
           F    S    +V   +LI + L LH  +  ++W L DL N+ ++A   F++ + + A+  
Sbjct: 46  FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITA--VFLSVVAILAMQE 102

Query: 146 RAGAEIAAVIFGFLATAAY--AVNTFLAVQKWRVSVRQ 181
           +    +  V      TA     ++ F+   K R ++++
Sbjct: 103 KKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140


>gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens]
          Length = 192

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%)

Query: 91  SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
           +CS  V  GVL  +     L L +  PQI+         L+D+  +   AFL+F+    L
Sbjct: 68  ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 127

Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
           A            LN    A  AA+ F F +   +++   LAV++++
Sbjct: 128 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 174


>gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens]
          Length = 191

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%)

Query: 91  SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
           +CS  V  GVL  +     L L +  PQI+         L+D+  +   AFL+F+    L
Sbjct: 67  ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 126

Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
           A            LN    A  AA+ F F +   +++   LAV++++
Sbjct: 127 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 173


>gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo
            sapiens]
          Length = 1980

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 22   GASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPC 81
            G+  P +P   P+++ +G+       D++      + +  +I   +  + +ET       
Sbjct: 1496 GSKKPQKPIPRPLNKIQGIVF-----DFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQM 1550

Query: 82   EGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV 139
            E + ++  +    F     +L MF+L  +     I WN+ D V   LS    F+A I+
Sbjct: 1551 ENILYWINLVFVIFFTCECVLKMFALRHYYFT--IGWNIFDFVVVILSIVGMFLADII 1606


>gi|130978359 tectonic family member 1 isoform 1 [Homo sapiens]
          Length = 592

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 78  CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
           C P C  + F  F +CS  VVTG         +++SLN     PQ  + L D +N  +
Sbjct: 93  CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150


>gi|130978357 tectonic family member 1 isoform 2 [Homo sapiens]
          Length = 587

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 78  CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
           C P C  + F  F +CS  VVTG         +++SLN     PQ  + L D +N  +
Sbjct: 93  CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150


>gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens]
          Length = 573

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 78  CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
           C P C  + F  F +CS  VVTG         +++SLN     PQ  + L D +N  +
Sbjct: 93  CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,643,906
Number of Sequences: 37866
Number of extensions: 242025
Number of successful extensions: 958
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 928
Number of HSP's gapped (non-prelim): 37
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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