SYNGR1 14043

Name: SYNGR1	Sequence: fasta or formatted (191aa)		NCBI GI: 22035698
Description: synaptogyrin 1 isoform 1b		Referenced in: Synapses
Other entries for this name: alt prot [233aa] synaptogyrin 1 isoform 1a alt prot [192aa] synaptogyrin 1 isoform 1c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.0 23 2 C cysteine 2.1 4 1 D aspartate 3.7 7 1 E glutamate 4.2 8 2 F phenylalanine 8.9 17 2 G glycine 7.3 14 2 H histidine 0.5 1 1 I isoleucine 4.2 8 1 K lysine 3.7 7 2 L leucine 9.4 18 2 M methionine 0.5 1 1 N asparagine 4.2 8 1 P proline 4.2 8 1 Q glutamine 3.1 6 1 R arginine 3.7 7 2 S serine 8.9 17 2 T threonine 3.7 7 1 V valine 8.4 16 2 W tryptophan 2.6 5 1 Y tyrosine 4.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptogyrin 1 isoform 1b SYNGR1 0.866 synaptogyrin 1 isoform 1a SYNGR1 0.814 synaptogyrin 1 isoform 1c SYNGR3 0.496 synaptogyrin 3 SYNGR2 0.468 synaptogyrin 2 SYNGR4 0.301 synaptogyrin 4 SYNPR 0.019 synaptoporin isoform 1 SYNPR 0.019 synaptoporin isoform 2 CMTM4 0.014 chemokine-like factor superfamily 4 isoform 2 CMTM4 0.014 chemokine-like factor superfamily 4 isoform 1 FITM2 0.014 fat storage-inducing transmembrane protein 2 ABCA8 0.008 ATP-binding cassette, sub-family A member 8 OR52B2 0.008 olfactory receptor, family 52, subfamily B, member 2... HTR5A 0.008 5-hydroxytryptamine receptor 5A ABCA10 0.005 ATP-binding cassette, sub-family A, member 10 [Homo... SLC38A8 0.005 solute carrier family 38, member 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.