SYNGR1 14042

Name: SYNGR1	Sequence: fasta or formatted (233aa)		NCBI GI: 22035696
Description: synaptogyrin 1 isoform 1a		Referenced in: Synapses
Other entries for this name: alt prot [191aa] synaptogyrin 1 isoform 1b alt prot [192aa] synaptogyrin 1 isoform 1c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 26 2 C cysteine 1.7 4 1 D aspartate 5.2 12 1 E glutamate 3.4 8 2 F phenylalanine 7.3 17 2 G glycine 9.4 22 2 H histidine 0.4 1 1 I isoleucine 3.9 9 1 K lysine 2.6 6 2 L leucine 6.9 16 2 M methionine 1.7 4 1 N asparagine 3.9 9 1 P proline 6.0 14 1 Q glutamine 6.0 14 2 R arginine 2.6 6 1 S serine 8.2 19 2 T threonine 3.9 9 1 V valine 7.3 17 2 W tryptophan 2.1 5 1 Y tyrosine 6.4 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synaptogyrin 1 isoform 1a SYNGR1 0.688 synaptogyrin 1 isoform 1b SYNGR1 0.538 synaptogyrin 1 isoform 1c SYNGR3 0.460 synaptogyrin 3 SYNGR2 0.431 synaptogyrin 2 SYNGR4 0.253 synaptogyrin 4 SYNPR 0.022 synaptoporin isoform 1 SYNPR 0.022 synaptoporin isoform 2 SYP 0.017 synaptophysin CMTM4 0.013 chemokine-like factor superfamily 4 isoform 2 CMTM4 0.013 chemokine-like factor superfamily 4 isoform 1 FITM2 0.011 fat storage-inducing transmembrane protein 2 MAPK7 0.011 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.011 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.011 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.011 mitogen-activated protein kinase 7 isoform 2 MED19 0.007 mediator complex subunit 19 SYNPO 0.007 synaptopodin isoform B SYNPO 0.007 synaptopodin isoform A DAZAP1 0.007 DAZ associated protein 1 isoform b TSC2 0.007 tuberous sclerosis 2 isoform 4 TSC2 0.007 tuberous sclerosis 2 isoform 1 TSC2 0.007 tuberous sclerosis 2 isoform 5 HTR5A 0.007 5-hydroxytryptamine receptor 5A SEZ6L 0.007 seizure related 6 homolog (mouse)-like precursor [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.