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Search of human proteins with 31563524
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31563524 myosin regulatory light chain 9 isoform b [Homo
sapiens]
(118 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31563524 myosin regulatory light chain 9 isoform b [Homo sapi... 241 1e-64
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi... 186 4e-48
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo... 177 2e-45
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo... 177 2e-45
gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo ... 177 2e-45
gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric [... 172 7e-44
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo... 137 2e-33
gi|169167243 PREDICTED: similar to myosin regulatory light chain... 136 4e-33
gi|88981341 PREDICTED: similar to myosin regulatory light chain ... 115 6e-27
gi|51464364 PREDICTED: similar to myosin regulatory light chain ... 115 6e-27
gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo s... 91 3e-19
gi|4505305 myosin regulatory light chain 5 [Homo sapiens] 83 4e-17
gi|28372499 myosin light chain, phosphorylatable, fast skeletal ... 80 3e-16
gi|10864037 myosin light chain 2a [Homo sapiens] 80 4e-16
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens] 68 1e-12
gi|58218968 calmodulin 3 [Homo sapiens] 61 2e-10
gi|4502549 calmodulin 2 [Homo sapiens] 61 2e-10
gi|5901912 calmodulin 1 [Homo sapiens] 61 2e-10
gi|4885111 calmodulin-like 3 [Homo sapiens] 57 2e-09
gi|223278387 calmodulin-like 5 [Homo sapiens] 46 5e-06
gi|110227596 calmodulin-like 4 isoform 2 [Homo sapiens] 44 3e-05
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 44 3e-05
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 43 5e-05
gi|4507615 troponin C, slow [Homo sapiens] 42 8e-05
gi|11067753 calcium binding protein 5 [Homo sapiens] 41 2e-04
gi|32698884 calcium binding protein 7 [Homo sapiens] 40 5e-04
gi|4757974 centrin 1 [Homo sapiens] 40 5e-04
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 39 0.001
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 39 0.001
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 38 0.002
>gi|31563524 myosin regulatory light chain 9 isoform b [Homo
sapiens]
Length = 118
Score = 241 bits (614), Expect = 1e-64
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 61 LGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
LGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
Sbjct: 61 LGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
sapiens]
Length = 172
Score = 186 bits (471), Expect = 4e-48
Identities = 108/172 (62%), Positives = 108/172 (62%), Gaps = 54/172 (31%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 61 LGFIHEDHLRE--------------LLTTMG----------------------------- 77
LG D E LT G
Sbjct: 61 LGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHE 120
Query: 78 -----------DRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
DRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
Sbjct: 121 DHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 172
>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 177 bits (449), Expect = 2e-45
Identities = 101/172 (58%), Positives = 107/172 (62%), Gaps = 54/172 (31%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSK+AK KTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 61 LGFIHED--------------HLRELLTTMGDR--------------------------- 79
LG D + LT G++
Sbjct: 61 LGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE 120
Query: 80 -------------FTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
FTDEEVDE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 121 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 177 bits (449), Expect = 2e-45
Identities = 101/172 (58%), Positives = 107/172 (62%), Gaps = 54/172 (31%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSK+AK KTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 61 LGFIHED--------------HLRELLTTMGDR--------------------------- 79
LG D + LT G++
Sbjct: 61 LGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE 120
Query: 80 -------------FTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
FTDEEVDE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 121 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|15809016 myosin regulatory light chain MRCL2 isoform A [Homo
sapiens]
Length = 172
Score = 177 bits (449), Expect = 2e-45
Identities = 101/172 (58%), Positives = 107/172 (62%), Gaps = 54/172 (31%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSK+AK KTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
Query: 61 LGFIHED--------------HLRELLTTMGDR--------------------------- 79
LG D + LT G++
Sbjct: 61 LGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE 120
Query: 80 -------------FTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
FTDEEVDE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 121 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 172
>gi|5453740 myosin, light chain 12A, regulatory, non-sarcomeric
[Homo sapiens]
Length = 171
Score = 172 bits (435), Expect = 7e-44
Identities = 101/172 (58%), Positives = 105/172 (61%), Gaps = 55/172 (31%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
MSSKR K KT KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
Sbjct: 1 MSSKRTKTKT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 59
Query: 61 LGFIHEDHLRE--------------LLTTMGD---------------------------- 78
LG D + LT G+
Sbjct: 60 LGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE 119
Query: 79 ------------RFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
RFTDEEVDE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 120 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 171
>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
sapiens]
Length = 154
Score = 137 bits (344), Expect = 2e-33
Identities = 80/153 (52%), Positives = 90/153 (58%), Gaps = 54/153 (35%)
Query: 20 SNVFAMFDQSQIQEFKEAFNMIDQNR---------------------DGFIDK------- 51
S++FAMFDQSQIQEFKEAFNMIDQNR D ++D
Sbjct: 2 SSMFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMMNEAPG 61
Query: 52 -----------------EDLHDMLASL---------GFIHEDHLRELLTTMGDRFTDEEV 85
D D++ + G I ED+LRELLTTMGDRFTDEEV
Sbjct: 62 PINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEV 121
Query: 86 DEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
DE+YREAPIDKKGNFNY+EFTRILKHGAKDKDD
Sbjct: 122 DELYREAPIDKKGNFNYIEFTRILKHGAKDKDD 154
>gi|169167243 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 136 bits (342), Expect = 4e-33
Identities = 85/166 (51%), Positives = 89/166 (53%), Gaps = 54/166 (32%)
Query: 7 KAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHE 66
K KTTKKRPQ ATS VFA FDQSQIQEFKEAFNMIDQNRDGFI KEDLH MLASLG
Sbjct: 212 KGKTTKKRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPT 271
Query: 67 D--------------HLRELLTTMGDRFT---------------DEE------------- 84
D + LL G + DEE
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 85 ------------VDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
VDE+Y EA IDKKGNFNY+EFT ILKHG KDKDD
Sbjct: 332 LTTVGDQFTDEEVDELYTEASIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|88981341 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 115 bits (289), Expect = 6e-27
Identities = 74/166 (44%), Positives = 88/166 (53%), Gaps = 54/166 (32%)
Query: 7 KAKTTKKRPQRATSNVFAMFDQSQ----------IQEFKEAF---------------NMI 41
K KTTKKRPQ ATS VFA FDQSQ I + ++ F N
Sbjct: 212 KGKTTKKRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPT 271
Query: 42 DQNRDGFIDKE--------------------DLHDMLASL---------GFIHEDHLREL 72
D D +++ D D++ + G I ED+LREL
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 73 LTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
LTT+GD+FTDEEVDE+Y EAPIDKKGNFNY+EFT ILKHG KDKDD
Sbjct: 332 LTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|51464364 PREDICTED: similar to myosin regulatory light chain
MRCL2 [Homo sapiens]
Length = 377
Score = 115 bits (289), Expect = 6e-27
Identities = 74/166 (44%), Positives = 88/166 (53%), Gaps = 54/166 (32%)
Query: 7 KAKTTKKRPQRATSNVFAMFDQSQ----------IQEFKEAF---------------NMI 41
K KTTKKRPQ ATS VFA FDQSQ I + ++ F N
Sbjct: 212 KGKTTKKRPQCATSKVFATFDQSQIQEFKEAFNMIDQNRDGFISKEDLHGMLASLGKNPT 271
Query: 42 DQNRDGFIDKE--------------------DLHDMLASL---------GFIHEDHLREL 72
D D +++ D D++ + G I ED+LREL
Sbjct: 272 DACLDAVMNEAPGPINFTMLLAMFGKKLNGTDPEDVIRNAFACFDEEATGTIQEDYLREL 331
Query: 73 LTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD 118
LTT+GD+FTDEEVDE+Y EAPIDKKGNFNY+EFT ILKHG KDKDD
Sbjct: 332 LTTVGDQFTDEEVDELYTEAPIDKKGNFNYIEFTSILKHGVKDKDD 377
>gi|94981553 slow cardiac myosin regulatory light chain 2 [Homo
sapiens]
Length = 166
Score = 90.5 bits (223), Expect = 3e-19
Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 56/164 (34%)
Query: 9 KTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDK----------------- 51
K KKR A SNVF+MF+Q+QIQEFKEAF ++DQNRDGFIDK
Sbjct: 4 KKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVKN 63
Query: 52 EDLHDMLASL--------------------------------------GFIHEDHLRELL 73
E++ +M+ G + D++RE+L
Sbjct: 64 EEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREML 123
Query: 74 TTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
TT +RF+ EEVD+M+ P D GN +Y I+ HG ++KD
Sbjct: 124 TTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD 166
>gi|4505305 myosin regulatory light chain 5 [Homo sapiens]
Length = 173
Score = 83.2 bits (204), Expect = 4e-17
Identities = 51/108 (47%), Positives = 62/108 (57%), Gaps = 23/108 (21%)
Query: 6 AKAKTTKK-----RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS 60
A KT KK R QRA+SNVF+ F+Q+QIQEFKEAF ++DQNRDGFIDKEDL D AS
Sbjct: 2 ASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYAS 61
Query: 61 LGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI 108
LG D+E+D M +EA G N+ F +
Sbjct: 62 LG--------------KTNVKDDELDAMLKEA----SGPINFTMFLNL 91
>gi|28372499 myosin light chain, phosphorylatable, fast skeletal
muscle [Homo sapiens]
Length = 169
Score = 80.5 bits (197), Expect = 3e-16
Identities = 59/173 (34%), Positives = 78/173 (45%), Gaps = 60/173 (34%)
Query: 1 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDK--------- 51
M+ KRAK +T + +S+VF+MFDQ+QIQEFKEAF +IDQNRDG IDK
Sbjct: 1 MAPKRAKRRTV----EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAA 56
Query: 52 --------EDLHDMLASL--------------------------------------GFIH 65
E+L M+ G I
Sbjct: 57 MGRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIK 116
Query: 66 EDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG-AKDKD 117
+ L ELLTT DRF+ EE+ M+ P D GN +Y ++ HG AKD++
Sbjct: 117 KKFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 169
>gi|10864037 myosin light chain 2a [Homo sapiens]
Length = 175
Score = 79.7 bits (195), Expect = 4e-16
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 58/175 (33%)
Query: 1 MSSKRAKAK---TTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDK------ 51
M+S++A + K+ QR +SNVF+MF+Q+QIQEFKEAF+ IDQNRDG I K
Sbjct: 1 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET 60
Query: 52 -----------EDLHDML--------------------------------------ASLG 62
E+L ML + G
Sbjct: 61 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG 120
Query: 63 FIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
+++D ++LL T D+F+ EV++M+ P+D GN +Y I+ HG + ++
Sbjct: 121 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE 175
>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
Length = 226
Score = 68.2 bits (165), Expect = 1e-12
Identities = 50/147 (34%), Positives = 65/147 (44%), Gaps = 52/147 (35%)
Query: 5 RAKAKTTKKRPQRATSNVFAMFDQSQIQEFKE---------------------------- 36
+A + K+ A+SNVF+MFDQSQIQEFKE
Sbjct: 26 QAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLALSPRLERNGMISAHCNLCLTGSSNS 85
Query: 37 ------AFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYR 90
AF ++DQNRDGFIDKEDL D A+LG I+ +EE++ M +
Sbjct: 86 PASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN--------------VKNEELEAMVK 131
Query: 91 EAPIDKKGNFNYVEFTRILKHGAKDKD 117
EAP G N+ F + K D
Sbjct: 132 EAP----GPINFTVFLTMFGEKLKGTD 154
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 60.8 bits (146), Expect = 2e-10
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 15 PQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLT 74
P+ T M D +E +EAF + D++ +G+I +L R ++T
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL---------------RHVMT 111
Query: 75 TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 109
+G++ TDEEVDEM REA ID G NY EF +++
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 46.6 bits (109), Expect = 4e-06
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
+ QI EFKEAF++ D++ DG I ++L ++ SL G T+ E+ +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---------------GQNPTEAELQD 51
Query: 88 MYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
M E D G ++ EF ++ KD D
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTD 81
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 60.8 bits (146), Expect = 2e-10
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 15 PQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLT 74
P+ T M D +E +EAF + D++ +G+I +L R ++T
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL---------------RHVMT 111
Query: 75 TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 109
+G++ TDEEVDEM REA ID G NY EF +++
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 46.6 bits (109), Expect = 4e-06
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
+ QI EFKEAF++ D++ DG I ++L ++ SL G T+ E+ +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---------------GQNPTEAELQD 51
Query: 88 MYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
M E D G ++ EF ++ KD D
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTD 81
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 60.8 bits (146), Expect = 2e-10
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 15 PQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLT 74
P+ T M D +E +EAF + D++ +G+I +L R ++T
Sbjct: 67 PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL---------------RHVMT 111
Query: 75 TMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRIL 109
+G++ TDEEVDEM REA ID G NY EF +++
Sbjct: 112 NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Score = 46.6 bits (109), Expect = 4e-06
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
+ QI EFKEAF++ D++ DG I ++L ++ SL G T+ E+ +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL---------------GQNPTEAELQD 51
Query: 88 MYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
M E D G ++ EF ++ KD D
Sbjct: 52 MINEVDADGNGTIDFPEFLTMMARKMKDTD 81
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 57.4 bits (137), Expect = 2e-09
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 25 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEE 84
M D +E +EAF + D++ +GF+ +L R ++T +G++ +DEE
Sbjct: 77 MKDTDNEEEIREAFRVFDKDGNGFVSAAEL---------------RHVMTRLGEKLSDEE 121
Query: 85 VDEMYREAPIDKKGNFNYVEFTRIL 109
VDEM R A D G NY EF R+L
Sbjct: 122 VDEMIRAADTDGDGQVNYEEFVRVL 146
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 46.2 bits (108), Expect = 5e-06
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 31 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYR 90
+++ + AF DQ+ DG I D LR + +G EE+D M R
Sbjct: 80 LEDLQVAFRAFDQDGDGHITV---------------DELRRAMAGLGQPLPQEELDAMIR 124
Query: 91 EAPIDKKGNFNYVEFTRIL 109
EA +D+ G NY EF R+L
Sbjct: 125 EADVDQDGRVNYEEFARML 143
>gi|110227596 calmodulin-like 4 isoform 2 [Homo sapiens]
Length = 149
Score = 43.9 bits (102), Expect = 3e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 62 GFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEF 105
G++ LR LT++G++ T +EVD+++REA I+ G Y EF
Sbjct: 95 GYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEF 138
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 43.9 bits (102), Expect = 3e-05
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 62 GFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEF 105
G++ LR LT++G++ T +EVD+++REA I+ G Y EF
Sbjct: 142 GYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEF 185
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 43.1 bits (100), Expect = 5e-05
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 15/79 (18%)
Query: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 91
+E E F + D+N DG+ID E+ L E+ G+ TDEE++ + ++
Sbjct: 94 EELAECFRIFDRNADGYIDPEE---------------LAEIFRASGEHVTDEEIESLMKD 138
Query: 92 APIDKKGNFNYVEFTRILK 110
+ G ++ EF ++++
Sbjct: 139 GDKNNDGRIDFDEFLKMME 157
Score = 35.4 bits (80), Expect = 0.010
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
+ I EFK AF+M D + G I ++L ++ L G T EE+D
Sbjct: 14 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRML---------------GQTPTKEELDA 58
Query: 88 MYREAPIDKKGNFNYVEF----TRILKHGAKDKDD 118
+ E D G ++ EF R +K AK K +
Sbjct: 59 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSE 93
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 42.4 bits (98), Expect = 8e-05
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 32 QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 91
+E + F M D+N DG+ID D L+ +L G+ T+++++E+ ++
Sbjct: 95 EELSDLFRMFDKNADGYIDL---------------DELKIMLQATGETITEDDIEELMKD 139
Query: 92 APIDKKGNFNYVEFTRILK 110
+ G +Y EF +K
Sbjct: 140 GDKNNDGRIDYDEFLEFMK 158
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 41.2 bits (95), Expect = 2e-04
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 31 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDEMYR 90
+QE ++AF D N DG I +L + L +G+R T E+ E+ R
Sbjct: 107 VQEMRDAFKEFDTNGDGEITLVELQQAMQRL--------------LGERLTPREISEVVR 152
Query: 91 EAPIDKKGNFNYVEFTRIL 109
EA ++ G ++ EF +++
Sbjct: 153 EADVNGDGTVDFEEFVKMM 171
Score = 38.5 bits (88), Expect = 0.001
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFI 64
Q +I+E +EAF D++RDGFI +DL +++ ++G++
Sbjct: 27 QDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYM 63
>gi|32698884 calcium binding protein 7 [Homo sapiens]
Length = 215
Score = 39.7 bits (91), Expect = 5e-04
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVD 86
+ +++E +EAF + D++ +GFI K++L + SLG++ + E++ D D +VD
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 39.7 bits (91), Expect = 5e-04
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 25 MFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEE 84
M ++ +E +AF + D + G I ++L + + +G+ TDEE
Sbjct: 97 MSEKDTKEEILKAFRLFDDDETGKISFKNL---------------KRVANELGENLTDEE 141
Query: 85 VDEMYREAPIDKKGNFNYVEFTRILK 110
+ EM EA D G N EF RI+K
Sbjct: 142 LQEMIDEADRDGDGEVNEEEFLRIMK 167
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
+ Q QE +EAF++ D + G ID ++L + +LGF EE+ +
Sbjct: 27 EDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGF---------------EPRKEEMKK 71
Query: 88 MYREAPIDKKGNFNYVEFTRILKHGAKDKD 117
M E + G ++ +F ++ +KD
Sbjct: 72 MISEVDREGTGKISFNDFLAVMTQKMSEKD 101
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 27 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVD 86
D ++E ++AF D N DG I +L L +L +G+R + EVD
Sbjct: 93 DMIGVRELRDAFREFDTNGDGRISVGELRAALKAL--------------LGERLSQREVD 138
Query: 87 EMYREAPIDKKGNFNYVEFTRIL 109
E+ ++ ++ G ++ EF R++
Sbjct: 139 EILQDVDLNGDGLVDFEEFVRMM 161
Score = 29.6 bits (65), Expect = 0.53
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 30 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFI 64
+I+E + AF D++RDG+I +L + +LG++
Sbjct: 22 EIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYM 56
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 38.5 bits (88), Expect = 0.001
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 27 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVD 86
D ++E ++AF D N DG I +L L +L +G+R + EVD
Sbjct: 150 DMIGVRELRDAFREFDTNGDGRISVGELRAALKAL--------------LGERLSQREVD 195
Query: 87 EMYREAPIDKKGNFNYVEFTRIL 109
E+ ++ ++ G ++ EF R++
Sbjct: 196 EILQDVDLNGDGLVDFEEFVRMM 218
Score = 32.0 bits (71), Expect = 0.11
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 14 RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFI 64
RP A + + +I+E + AF D++RDG+I +L + +LG++
Sbjct: 63 RPSIAATQLDRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYM 113
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 37.7 bits (86), Expect = 0.002
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 7 KAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHE 66
+A + P S V F++ Q++EFKEAF + D+ DG I D++ +LG
Sbjct: 42 QAPQKTQEPPVDLSKVVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALG--QN 99
Query: 67 DHLRELLTTMGDRFTDE 83
E+L +G+ +DE
Sbjct: 100 PTNAEVLKVLGNPKSDE 116
Score = 31.6 bits (70), Expect = 0.14
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 19/84 (22%)
Query: 28 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGFIHEDHLRELLTTMGDRFTDEEVDE 87
Q +++ E F + D+ +G + +L R +LTT+G++ T+EEV E
Sbjct: 140 QGTYEDYLEGFRVFDKEGNGKVMGAEL---------------RHVLTTLGEKMTEEEV-E 183
Query: 88 MYREAPIDKKGNFNYVEFTRILKH 111
D G NY F LKH
Sbjct: 184 TVLAGHEDSNGCINYEAF---LKH 204
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,825,759
Number of Sequences: 37866
Number of extensions: 145880
Number of successful extensions: 712
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 466
Number of HSP's gapped (non-prelim): 248
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.