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Search of human proteins with 31543543
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543543 retinoic acid induced 17 [Homo sapiens]
(1067 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543543 retinoic acid induced 17 [Homo sapiens] 2256 0.0
gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo s... 1087 0.0
gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo s... 1054 0.0
gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens] 95 4e-19
gi|27532984 protein inhibitor of activated STAT X isoform alpha ... 90 1e-17
gi|56699458 protein inhibitor of activated STAT X isoform beta [... 90 1e-17
gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens] 88 4e-17
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 85 4e-16
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 85 4e-16
gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens] 83 2e-15
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 77 7e-14
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 73 2e-12
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 70 8e-12
gi|163965366 nascent polypeptide-associated complex alpha subuni... 70 1e-11
gi|150170670 piccolo isoform 2 [Homo sapiens] 69 2e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 69 2e-11
gi|47132519 Ras association and pleckstrin homology domains 1 is... 69 2e-11
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 67 9e-11
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 67 9e-11
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 67 9e-11
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 67 9e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 66 2e-10
gi|55750053 atrophin-1 [Homo sapiens] 66 2e-10
gi|55750041 atrophin-1 [Homo sapiens] 66 2e-10
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 66 2e-10
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 64 6e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 64 8e-10
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 64 8e-10
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 63 1e-09
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 63 2e-09
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 2256 bits (5845), Expect = 0.0
Identities = 1067/1067 (100%), Positives = 1067/1067 (100%)
Query: 1 MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVV 60
MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVV
Sbjct: 1 MNSMDRHIQQTNDRLQCIKQHLQNPANFHNAATELLDWCGDPRAFQRPFEQSLMGCLTVV 60
Query: 61 SRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPP 120
SRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPP
Sbjct: 61 SRVAAQQGFDLDLGYRLLAVCAANRDKFTPKSAALLSSWCEELGRLLLLRHQKSRQSDPP 120
Query: 121 GKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQ 180
GKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQ
Sbjct: 121 GKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQ 180
Query: 181 VLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYG 240
VLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYG
Sbjct: 181 VLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYG 240
Query: 241 RPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATAT 300
RPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATAT
Sbjct: 241 RPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATAT 300
Query: 301 ATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGM 360
ATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGM
Sbjct: 301 ATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGM 360
Query: 361 SGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGP 420
SGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGP
Sbjct: 361 SGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGP 420
Query: 421 NSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNN 480
NSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNN
Sbjct: 421 NSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNN 480
Query: 481 TFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPF 540
TFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPF
Sbjct: 481 TFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPF 540
Query: 541 PPDIKPNMSALPPPPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTL 600
PPDIKPNMSALPPPPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTL
Sbjct: 541 PPDIKPNMSALPPPPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTL 600
Query: 601 MWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPG 660
MWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPG
Sbjct: 601 MWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPG 660
Query: 661 RNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASS 720
RNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASS
Sbjct: 661 RNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASS 720
Query: 721 GNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWR 780
GNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWR
Sbjct: 721 GNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWR 780
Query: 781 CPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGI 840
CPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGI
Sbjct: 781 CPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGI 840
Query: 841 PSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFD 900
PSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFD
Sbjct: 841 PSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFD 900
Query: 901 FPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQ 960
FPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQ
Sbjct: 901 FPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQ 960
Query: 961 QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGA 1020
QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGA
Sbjct: 961 QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGA 1020
Query: 1021 QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN 1067
QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN
Sbjct: 1021 QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN 1067
>gi|54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo
sapiens]
Length = 920
Score = 1087 bits (2812), Expect = 0.0
Identities = 581/957 (60%), Positives = 687/957 (71%), Gaps = 55/957 (5%)
Query: 129 LSSMSSMKPTLS---HSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNP 185
++SM+ MKP L H DGSF Y+SVPWQQ+ QP GSLSVVTTVWGV N +QSQVLGNP
Sbjct: 1 MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP 60
Query: 186 MANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYP 245
M A +P G+ M G+ + L SPQ GQQ A+ G + Y+QQ +Y R YP
Sbjct: 61 MGPAGSP---SGSSMMPGVAGGSSALTSPQCLGQQA--FAEGGANKGYVQQGVYSRGGYP 115
Query: 246 GSGGFGASYPGGPNAPAGMGIPPHT-RPPADFTQPAAAAAAAAVAAAAATATATATATVA 304
G+ GF Y GGP G+G+P H RP DFTQ AAAAAAVAAAAATATATATATVA
Sbjct: 116 GAPGFTTGYAGGPG---GLGLPSHAARPSTDFTQ---AAAAAAVAAAAATATATATATVA 169
Query: 305 ALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPP 364
ALQE Q+++++QYG MG Q++NSQF+ GPRGP+ G MNP + M PSG+S P
Sbjct: 170 ALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPRGPSVPAG-MNPTGIGGVMGPSGLS--P 226
Query: 365 MGMNQPRPPGISPFGTHGQRMPQQTYPGP-RPQSLPIQNIKRPY----PGEPNYGNQQYG 419
+ MN R G++P GQR+PQ YPGP + Q LP Q +KR Y PG+ QY
Sbjct: 227 LAMNPTRAAGMTPLYA-GQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYA 285
Query: 420 PNS-QFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQ---YPPPTVNMGQYYKP-EQ 474
P++ QF PGQ PAP SP+YPG R+P Q Q P PT G +YKP EQ
Sbjct: 286 PSTAQFAPSPGQPPAP-------SPSYPGHRLPLQQGMTQSLSVPGPT---GLHYKPTEQ 335
Query: 475 FNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQ 534
FNGQ +F+G S S YSQ ++ P R +P YP SP+PGNPTPPMTP SS+P Y+SP+Q
Sbjct: 336 FNGQGASFNGGSVS-YSQPGLSGPTRSIP--GYPSSPLPGNPTPPMTPSSSVP-YMSPNQ 391
Query: 535 DVKPPFPPDIKPNMSALPPPPANHN--DELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHL 592
+VK PF PD+KPN+++L P+ DELRLTFPVRDGVVLEPFRL+HNLAVSNHVF L
Sbjct: 392 EVKSPFLPDLKPNLNSLHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQL 451
Query: 593 RPTVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLH 652
R +V++TL+ R DLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPL+
Sbjct: 452 RDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLY 511
Query: 653 LKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRN 712
LKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRN
Sbjct: 512 LKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRN 571
Query: 713 FSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQL 772
FSS G NGEDGVEQTAIKVSLKCPITFRRIQLPARGHDC+H+QCFDLESYLQL
Sbjct: 572 FSS-GTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQL 630
Query: 773 NCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLH 832
NCERGTWRCPVCNKTALLEGLEVDQYM GIL IQ+S++EE+TIDPTCSW+PVP+K D+H
Sbjct: 631 NCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMH 690
Query: 833 IKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNN 892
IK++PDG KR +T+SP+ ++MP+VMEMIAALGPG +P+ PP +DY QG++
Sbjct: 691 IKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGSS 750
Query: 893 YQGHGNF--DFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAG 950
+ G G F FP P ++ +F GPP +S+ D+P+++ EK + + M AG
Sbjct: 751 FLGPGTFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTA-CLPSQMAPAG 809
Query: 951 SSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNP 1010
D H GLH + + GP LHHS PPP Q Q S P +L F+P
Sbjct: 810 HLDPTHNPGTPGLHTSNLGAPPGPQLHHSN-PPPASRQSLGQ-----ASLGPTGELAFSP 863
Query: 1011 SSALEGQAGAQGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN 1067
++ + G GA + PEP+LDLLPELTNPDELLSYL PPDLP+N+NDDLLSLFENN
Sbjct: 864 ATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN 920
>gi|54607110 zinc finger, MIZ-type containing 2 isoform 2 [Homo
sapiens]
Length = 894
Score = 1054 bits (2726), Expect = 0.0
Identities = 567/956 (59%), Positives = 669/956 (69%), Gaps = 79/956 (8%)
Query: 129 LSSMSSMKPTLS---HSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNP 185
++SM+ MKP L H DGSF Y+SVPWQQ+ QP GSLSVVTTVWGV N +QSQVLGNP
Sbjct: 1 MNSMNPMKPALPPAPHGDGSFAYESVPWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNP 60
Query: 186 MANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYP 245
M A +P G+ M G+ + L SPQ GQQ A+ G + Y+QQ +Y R YP
Sbjct: 61 MGPAGSP---SGSSMMPGVAGGSSALTSPQCLGQQA--FAEGGANKGYVQQGVYSRGGYP 115
Query: 246 GSGGFGASYPGGPNAPAGMGIPPHT-RPPADFTQPAAAAAAAAVAAAAATATATATATVA 304
G+ GF Y GGP G+G+P H RP DFTQ AAAAAAVAAAAATATATATATVA
Sbjct: 116 GAPGFTTGYAGGPG---GLGLPSHAARPSTDFTQ---AAAAAAVAAAAATATATATATVA 169
Query: 305 ALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPP 364
ALQE Q+++++QYG MG Q++NSQF+ GPRGP+ G MNP + M PSG+S P
Sbjct: 170 ALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPRGPSVPAG-MNPTGIGGVMGPSGLS--P 226
Query: 365 MGMNQPRPPGISPFGTHGQRMPQQTYPGP-RPQSLPIQNIKRPY----PGEPNYGNQQYG 419
+ MN R G++P GQR+PQ YPGP + Q LP Q +KR Y PG+ QY
Sbjct: 227 LAMNPTRAAGMTPLYA-GQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYA 285
Query: 420 PNS-QFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQ---YPPPTVNMGQYYKPEQF 475
P++ QF PGQ PAP SP+YPG R+P Q Q P PT G +YKP
Sbjct: 286 PSTAQFAPSPGQPPAP-------SPSYPGHRLPLQQGMTQSLSVPGPT---GLHYKPT-- 333
Query: 476 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQD 535
R +P YP SP+PGNPTPPMTP SS+P Y+SP+Q+
Sbjct: 334 ------------------------RSIP--GYPSSPLPGNPTPPMTPSSSVP-YMSPNQE 366
Query: 536 VKPPFPPDIKPNMSALPPPPANHN--DELRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLR 593
VK PF PD+KPN+++L P+ DELRLTFPVRDGVVLEPFRL+HNLAVSNHVF LR
Sbjct: 367 VKSPFLPDLKPNLNSLHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLR 426
Query: 594 PTVHQTLMWRSDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLHL 653
+V++TL+ R DLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPL+L
Sbjct: 427 DSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLYL 486
Query: 654 KHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNF 713
KHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNF
Sbjct: 487 KHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNF 546
Query: 714 SSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLN 773
SS G NGEDGVEQTAIKVSLKCPITFRRIQLPARGHDC+H+QCFDLESYLQLN
Sbjct: 547 SS-GTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLN 605
Query: 774 CERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHI 833
CERGTWRCPVCNKTALLEGLEVDQYM GIL IQ+S++EE+TIDPTCSW+PVP+K D+HI
Sbjct: 606 CERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHI 665
Query: 834 KDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNY 893
K++PDG KR +T+SP+ ++MP+VMEMIAALGPG +P+ PP +DY QG+++
Sbjct: 666 KEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGSSF 725
Query: 894 QGHGNF--DFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGS 951
G G F FP P ++ +F GPP +S+ D+P+++ EK + + M AG
Sbjct: 726 LGPGTFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTA-CLPSQMAPAGH 784
Query: 952 SDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPS 1011
D H GLH + + GP LHHS PPP Q Q S P +L F+P+
Sbjct: 785 LDPTHNPGTPGLHTSNLGAPPGPQLHHSN-PPPASRQSLGQ-----ASLGPTGELAFSPA 838
Query: 1012 SALEGQAGAQGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSNDDLLSLFENN 1067
+ + G GA + PEP+LDLLPELTNPDELLSYL PPDLP+N+NDDLLSLFENN
Sbjct: 839 TGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN 894
>gi|115298686 protein inhibitor of activated STAT, 3 [Homo sapiens]
Length = 628
Score = 94.7 bits (234), Expect = 4e-19
Identities = 126/543 (23%), Positives = 198/543 (36%), Gaps = 83/543 (15%)
Query: 498 PPRPVPVANYPHSPVPGNPTPP--MTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPP 555
PP PV SP P P PP + PG+ + P D+ PP P + P+++ P P
Sbjct: 81 PPGTSPVG----SPGPLAPIPPTLLAPGTLLGP--KREVDMHPPLPQPVHPDVTMKPLP- 133
Query: 556 ANHNDELRLTFPVRDGVVLEPFRL----EHNLAVSNHVFHLRPTVHQTLMWRSDLELQFK 611
F G ++ P L ++ F L P Q ++ ++ K
Sbjct: 134 ----------FYEVYGELIRPTTLASTSSQRFEEAHFTFALTPQQVQQILTSREVLPGAK 183
Query: 612 CYHHEDRQMN-----------TNWPASVQVSVNAT--------PLTIERGDNKTSHKPLH 652
C + Q+ +P ++ V VN P T + K +P++
Sbjct: 184 CDYTIQVQLRFCLCETSCPQEDYFPPNLFVKVNGKLCPLPGYLPPTKNGAEPKRPSRPIN 243
Query: 653 LKHVCQPGRNTIQITVTACCCSHL-----FVLQLVHRPSVRSVLQGLLKKRLLPAEHCIT 707
+ + + T+ T+ S + LV + + ++LQ L K + +H
Sbjct: 244 ITPLARLSA-TVPNTIVVNWSSEFGRNYSLSVYLVRQLTAGTLLQKLRAKGIRNPDHSRA 302
Query: 708 KIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLE 767
IK T + + V T+++VSL CP+ R+ +P R C H+Q FD
Sbjct: 303 LIKEKL----------TADPDSEVATTSLRVSLMCPLGKMRLTVPCRALTCAHLQSFDAA 352
Query: 768 SYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPVPI 827
YLQ+N ++ TW CPVC+K A E L +D IL++ S+ +E+ SW P+
Sbjct: 353 LYLQMNEKKPTWTCPVCDKKAPYESLIIDGLFMEILSSC--SDCDEIQFMEDGSWCPMKP 410
Query: 828 KSDLHIKDDP-----DGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTN 882
K + P DG+ + PS+ V + + LPP +
Sbjct: 411 KKEASEVCPPPGYGLDGLQYSPVQGGDPSEN-KKKVEVIDLTIESSSDEEDLPPTKKHCS 469
Query: 883 SNDYS------SQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEK 936
+ S+G GH GT DF+ P +PP P
Sbjct: 470 VTSAAIPALPGSKGVLTSGHQPSSVLRSPAMGTLGGDFLSSLPLHEYPPAFPLGADIQGL 529
Query: 937 PLSHPMQETMPHAGSSDQPHPSIQQGL-----------HVPHPSSQSGPPLHHSGAPPPP 985
L +Q H G S Q L H P + + H S P PP
Sbjct: 530 DLFSFLQTESQHYGPSVITSLDEQDALGHFFQYRGTPSHFLGPLAPTLGSSHCSATPAPP 589
Query: 986 PSQ 988
P +
Sbjct: 590 PGR 592
>gi|27532984 protein inhibitor of activated STAT X isoform alpha
[Homo sapiens]
Length = 572
Score = 90.1 bits (222), Expect = 1e-17
Identities = 103/415 (24%), Positives = 168/415 (40%), Gaps = 54/415 (13%)
Query: 456 SGQYPPPTVNMGQYYK---PEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPV 512
SG P + + + Y+ P G ++ + S S +S + P P HS +
Sbjct: 47 SGCSPAVQIKIRELYRRRYPRTLEGLSDLSTIKS-SVFSLDGGSSPVEPDLAVAGIHS-L 104
Query: 513 PGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHNDELRLTFPVRD-- 570
P P +P S + L QD KP F +P+ PP P H D P D
Sbjct: 105 PSTSVTPHSPSSPVGSVLL--QDTKPTFEMQ-QPS----PPIPPVHPDVQLKNLPFYDVL 157
Query: 571 GVVLEPFRLEHN----LAVSNHVFHLRPTVHQTLMWRSD----------LELQFK-CYHH 615
V+++P L + +F L P + + D +++Q + C
Sbjct: 158 DVLIKPTSLVQSSIQRFQEKFFIFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAE 217
Query: 616 EDRQMNTNWPASVQVSVNA--------TPLTIERGDNKTSHKPLHLKHVCQPGR---NTI 664
N+P S+ + VN P + K +PL++ + + N I
Sbjct: 218 TSCPQEDNYPNSLCIKVNGKLFPLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQI 277
Query: 665 QIT-VTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSGNT 723
I+ + ++ + LV + + +LQ L K + +H IK
Sbjct: 278 SISWASEIGKNYSMSVYLVRQLTSAMLLQRLKMKGIRNPDHSRALIKEKL---------- 327
Query: 724 TLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPV 783
T + + + T+++VSL CP+ R+ +P R C H+QCFD YLQ+N ++ TW CPV
Sbjct: 328 TADPDSEIATTSLRVSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPV 387
Query: 784 CNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPV-PIKSDLHIKDDP 837
C+K A E L +D ILN S+ +E+ SW P+ P K + + P
Sbjct: 388 CDKKAAYESLILDGLFMEILN--DCSDVDEIKFQEDGSWCPMRPKKEAMKVSSQP 440
>gi|56699458 protein inhibitor of activated STAT X isoform beta
[Homo sapiens]
Length = 621
Score = 90.1 bits (222), Expect = 1e-17
Identities = 103/415 (24%), Positives = 168/415 (40%), Gaps = 54/415 (13%)
Query: 456 SGQYPPPTVNMGQYYK---PEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPV 512
SG P + + + Y+ P G ++ + S S +S + P P HS +
Sbjct: 47 SGCSPAVQIKIRELYRRRYPRTLEGLSDLSTIKS-SVFSLDGGSSPVEPDLAVAGIHS-L 104
Query: 513 PGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHNDELRLTFPVRD-- 570
P P +P S + L QD KP F +P+ PP P H D P D
Sbjct: 105 PSTSVTPHSPSSPVGSVLL--QDTKPTFEMQ-QPS----PPIPPVHPDVQLKNLPFYDVL 157
Query: 571 GVVLEPFRLEHN----LAVSNHVFHLRPTVHQTLMWRSD----------LELQFK-CYHH 615
V+++P L + +F L P + + D +++Q + C
Sbjct: 158 DVLIKPTSLVQSSIQRFQEKFFIFALTPQQVREICISRDFLPGGRRDYTVQVQLRLCLAE 217
Query: 616 EDRQMNTNWPASVQVSVNA--------TPLTIERGDNKTSHKPLHLKHVCQPGR---NTI 664
N+P S+ + VN P + K +PL++ + + N I
Sbjct: 218 TSCPQEDNYPNSLCIKVNGKLFPLPGYAPPPKNGIEQKRPGRPLNITSLVRLSSAVPNQI 277
Query: 665 QIT-VTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSGNT 723
I+ + ++ + LV + + +LQ L K + +H IK
Sbjct: 278 SISWASEIGKNYSMSVYLVRQLTSAMLLQRLKMKGIRNPDHSRALIKEKL---------- 327
Query: 724 TLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPV 783
T + + + T+++VSL CP+ R+ +P R C H+QCFD YLQ+N ++ TW CPV
Sbjct: 328 TADPDSEIATTSLRVSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPV 387
Query: 784 CNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPV-PIKSDLHIKDDP 837
C+K A E L +D ILN S+ +E+ SW P+ P K + + P
Sbjct: 388 CDKKAAYESLILDGLFMEILN--DCSDVDEIKFQEDGSWCPMRPKKEAMKVSSQP 440
>gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]
Length = 510
Score = 88.2 bits (217), Expect = 4e-17
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 612 CYHHEDRQMNTNWPASVQVSVNAT--------PLTIERGDNKTSHKPLHLKHVCQPGRNT 663
CY +P ++ V VN + P + K +P++L H+ T
Sbjct: 196 CYSDTSCPQEDQYPPNIAVKVNHSYCSVPGYYPSNKPGVEPKRPCRPINLTHLMYLSSAT 255
Query: 664 IQITVT--ACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSG 721
+ITVT S+ L LV + + +LQ L + E C +K
Sbjct: 256 NRITVTWGNYGKSYSVALYLVRQLTSSELLQRLKTIGVKHPELCKALVKEKLR------- 308
Query: 722 NTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRC 781
L+ + + T ++VSL CP+ R+ +P R C H+QCFD YLQ+N ++ TW C
Sbjct: 309 ---LDPDSEIATTGVRVSLICPLVKMRLSVPCRAETCAHLQCFDAVFYLQMNEKKPTWMC 365
Query: 782 PVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSWRPV 825
PVC+K A + L +D + IL+ + ++ E +D SW P+
Sbjct: 366 PVCDKPAPYDQLIIDGLLSKILSECEDADEIEYLVDG--SWCPI 407
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 84.7 bits (208), Expect = 4e-16
Identities = 109/446 (24%), Positives = 144/446 (32%), Gaps = 77/446 (17%)
Query: 120 PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQS 179
P + PP + + LS G P + PP S + ++ +++S +
Sbjct: 217 PNRSAYPPPAPAYA-----LSSPRGGTPGSGAAAAAGSKPPPSSSASASS----SSSSFA 267
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMY 239
Q M GG P + T N L SP S
Sbjct: 268 QQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPS---------------------SAR 306
Query: 240 GRPNYPGSGGFGASYPGGP-NAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATAT 298
G YPG Y GGP + AG G PAD AAAAA AAAAA+ A
Sbjct: 307 GYQGYPGG-----DYSGGPQDGGAGKG-------PADMASQCWGAAAAAAAAAAASGGA- 353
Query: 299 ATATVAALQETQNKDINQYGPMGPTQAYNS--QFMNQPGPRGPASMGGSMNPASMAAGMT 356
+ + + PM P + P P P G M P
Sbjct: 354 -------------QQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNP 400
Query: 357 PSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQ 416
S GPP G Q P+G+ + T G ++ + + P G
Sbjct: 401 YSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPS 460
Query: 417 QYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFN 476
YG Q P Q P P +P S P Q +QPS Q P +P Q
Sbjct: 461 GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQS--------QPPQLQ 512
Query: 477 GQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDV 536
SS YSQ ++PP A YP P P S P SP Q
Sbjct: 513 --------SSQPPYSQ-QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ 563
Query: 537 KPPFP-PDIKPNMSALPPPPANHNDE 561
+P P P +A P P + + +
Sbjct: 564 QPQQPAPSTLSQQAAYPQPQSQQSQQ 589
Score = 66.2 bits (160), Expect = 2e-10
Identities = 117/474 (24%), Positives = 162/474 (34%), Gaps = 95/474 (20%)
Query: 111 HQKSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTV 170
+Q+ QS PP QPP S S P H PY S Q T Q P S
Sbjct: 500 YQQQPQSQPPQLQSSQPPYSQQPSQPP---HQQSPAPYPS--QQSTTQQHPQS------- 547
Query: 171 WGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPA 230
SQ P P P + P S Q QQ +S + P
Sbjct: 548 ----QPPYSQPQAQSPYQQQQPQQPA--PSTLSQQAAYPQPQSQQ--SQQTAYSQQRFPP 599
Query: 231 QPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAA 290
+ Q +G + S S GG M + +R P+ + + +
Sbjct: 600 PQELSQDSFG--SQASSAPSMTSSKGGQE---DMNLSLQSR-PSSLPDLSGSIDDLPMGT 653
Query: 291 AAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPAS 350
A + +T+ +++ Q Q+ P Q S F P P G S +P
Sbjct: 654 EGALSPGVSTSGISSSQGEQS---------NPAQ---SPFSPHTSPHLPGIRGPSPSPV- 700
Query: 351 MAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGE 410
G P + Q R +SP G +MP PRP S +I P +
Sbjct: 701 -----------GSPASVAQSRSGPLSPAAVPGNQMP------PRPPSGQSDSIMHPSMNQ 743
Query: 411 PNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYY 470
+ Q G + P P QY +P P L+ P QPS GQ MG Y
Sbjct: 744 SSIA-QDRGYMQRNPQMP-QYSSPQPGSALS---------PRQPSGGQI---HTGMGSY- 788
Query: 471 KPEQFNGQNNTFSGSSYSNYSQGNVNRPP--RPVPVANYPHSPVPGNPTPPMTPGS---- 524
+Q + + G Y QG R P +P ANYP + + G P G
Sbjct: 789 --QQNSMGSYGPQGGQYG--PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ 844
Query: 525 -SIPPY-------LSPSQDVKPPFPPDIKPNM-----SALPPPPANHNDELRLT 565
IPPY +S + P+ P++ NM S + PPP N + + T
Sbjct: 845 PGIPPYGTLPPGRMSHASMGNRPYGPNM-ANMPPQVGSGMCPPPGGMNRKTQET 897
Score = 62.4 bits (150), Expect = 2e-09
Identities = 109/480 (22%), Positives = 164/480 (34%), Gaps = 87/480 (18%)
Query: 117 SDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQP-PGSLSVVTTVWGVTN 175
S P ++P P +S +S+ + +DGS DS ++N+ P PG + T +
Sbjct: 1167 STPHSQIPPLPGMSRSNSVGIQDAFNDGS---DSTFQKRNSMTPNPGYQPSMNT-----S 1218
Query: 176 TSQSQVLGNPMANANNPMN--PGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPY 233
++ P + M PG +P S N G+ P +S AGP
Sbjct: 1219 DMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDP--------YSRAAGPGLGN 1270
Query: 234 IQQSMYGRPNYPGSGGFGA--SYPG-GPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAA 290
+ +M R +YP G + + PG GP G P P++
Sbjct: 1271 V--AMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSN--------------P 1314
Query: 291 AAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRG---PASMGGSMN 347
+ + + Q+ Q D +Y +QF Q P G P+
Sbjct: 1315 DSGMYSPSRYPPQQQQQQQQRHD-----------SYGNQFSTQGTPSGSPFPSQQTTMYQ 1363
Query: 348 PASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPY 407
G GPP ++ + P+ T + QQ P +PQ Q +P
Sbjct: 1364 QQQQNYKRPMDGTYGPPAKRHEGEMYSV-PYSTGQGQPQQQQLPPAQPQPASQQQAAQPS 1422
Query: 408 PGEP---NYGNQQY-------------GPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMP 451
P + YGN GP +QFP Q G+ PP N P Q M
Sbjct: 1423 PQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMG 1482
Query: 452 SQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPV---ANYP 508
+ M Q +N N +GS+ + VNR + AN+
Sbjct: 1483 GPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHE 1542
Query: 509 HS-PVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHNDELRLTFP 567
S P G PP P + +PP P PP S PPP+ N +++ P
Sbjct: 1543 GSWPSHGTRQPPYGPSAPVPPMTRP--------PP------SNYQPPPSMQNHIPQVSSP 1588
Score = 57.0 bits (136), Expect = 9e-08
Identities = 118/461 (25%), Positives = 150/461 (32%), Gaps = 138/461 (29%)
Query: 217 AGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNA--------------PA 262
AGQ+ + A GP QP ++ G + G GG GA GGP A PA
Sbjct: 54 AGQESEGPA-VGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPA 112
Query: 263 ------------------GMGIPPHTR-----PPA-DFTQPAAAAAAAAVAAAAAT---- 294
G+G PPH+ PPA F QP + +A AAAAA
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQ 172
Query: 295 ATATATATVAALQETQNKDINQY-GPMG-------PTQAYNSQFMNQPG--PRGPASMGG 344
+ +AALQ + Y GP P YNS + N+ P PA
Sbjct: 173 HGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALS 232
Query: 345 SMNPASMAAGMTPSGMSGPPMGMNQPRPPGISP-----FGTHGQRMPQQTYPG-PRPQSL 398
S + +G + S PP + S FG G P G P+P +
Sbjct: 233 SPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTAT 292
Query: 399 PIQN--IKRP--------YPGEPNYGNQQYGPNSQFP----------------------- 425
P N + P YPG G Q G + P
Sbjct: 293 PTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGG 352
Query: 426 TQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGS 485
Q + AP P P R P QPSS P MG+ +P+ + G N
Sbjct: 353 AQQRSHHAPMSPGSSGGGGQPLARTP-QPSS-----PMDQMGK-MRPQPYGGTN------ 399
Query: 486 SYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTP---PMTP-------------GSSIPPY 529
YSQ P P YP P G+ TP PMT IPPY
Sbjct: 400 ---PYSQ-QQGPPSGPQQGHGYPGQPY-GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 530 ------------LSPSQDVKPPFPPDIKPNMSALPPPPANH 558
+P + + P P +P S PP H
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPH 495
Score = 46.6 bits (109), Expect = 1e-04
Identities = 101/425 (23%), Positives = 145/425 (34%), Gaps = 61/425 (14%)
Query: 128 PLSSMSSMKPTLSHSDGSFPYD------SVPWQQN--TNQPPGSLSVVTTVWGVTNTSQS 179
P+ M M+P G+ PY S P Q + QP GS + + +QS
Sbjct: 383 PMDQMGKMRP--QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQS 440
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTSNPGLN--SPQFAGQQQQFSAKAGPAQPYIQQS 237
+ G P G P G P N SP QQ +S + P+ Q S
Sbjct: 441 AMGGLSYTQQIPPYGQQG-PSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPS 499
Query: 238 MYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATA 297
+P S P P + PP+++ P+ QP + A + +T
Sbjct: 500 YQQQPQ---------SQP--PQLQSSQ--PPYSQQPS---QPPHQQSPAPYPSQQSTTQQ 543
Query: 298 TATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTP 357
+ Q Q P P + SQ P P+ S S P
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQ---QTAYSQQRFPPP 600
Query: 358 SGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLP-----IQNIKRPYPGEPN 412
+S G P ++ + G + RP SLP I ++ G +
Sbjct: 601 QELSQDSFGSQASSAPSMT--SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS 658
Query: 413 YGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPS-----------QPSSGQYPP 461
G G +S Q PA +P P TSP+ PG R PS Q SG P
Sbjct: 659 PGVSTSGISSSQGEQSN--PAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSP 716
Query: 462 PTVNMGQYYKPEQFNGQNNTFSGSSYSNYS----QGNVNRPPRPVPVANYPHSPVPGNPT 517
V G P +GQ+++ S + S +G + R P+ + Y SP PG+
Sbjct: 717 AAV-PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQ---MPQY-SSPQPGSAL 771
Query: 518 PPMTP 522
P P
Sbjct: 772 SPRQP 776
Score = 45.8 bits (107), Expect = 2e-04
Identities = 52/198 (26%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 839 GIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGN 898
G P + + + +P + M +A+G G S PP G + Y QG + N
Sbjct: 416 GYPGQPYGSQTPQRYPMTMQGRAQSAMG-GLSYTQQIPPYGQQGPSGYGQQGQT--PYYN 472
Query: 899 FDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNM--AALEKPLSHPMQETMPHAGSSDQPH 956
PH PP PP + + ++P S P Q S QP
Sbjct: 473 QQSPHPQ---------QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPS 523
Query: 957 PSIQQGLHVPHPSSQSGPPLHHSGAPP--PPPSQPP---RQPPQAAPSSHPHSDLTFNPS 1011
Q P+PS QS H PP P +Q P +QP Q APS+ P
Sbjct: 524 QPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQ 583
Query: 1012 SALEGQAGAQGASDMPEP 1029
S + Q A P P
Sbjct: 584 SQ-QSQQTAYSQQRFPPP 600
Score = 45.1 bits (105), Expect = 4e-04
Identities = 74/318 (23%), Positives = 98/318 (30%), Gaps = 46/318 (14%)
Query: 258 PNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQY 317
P +PAG G + P T + A A+ + + + + + I
Sbjct: 1132 PPSPAGSGSMQGPQTPQS-TSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDA 1190
Query: 318 GPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISP 377
G + + P P SMN + M M+ P M + PG P
Sbjct: 1191 FNDGSDSTFQKRNSMTPNP----GYQPSMNTSDMMGRMSYEPNKDPYGSMR--KAPGSDP 1244
Query: 378 FGTHGQRMPQQTYPGPRP-QSLPIQNIKRPYPGEPNYGNQQY----GPNSQFPTQPGQYP 432
F + GQ GP P P G G +Q+ GP + T+PG P
Sbjct: 1245 FMSSGQ--------GPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGP 1296
Query: 433 APNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQ 492
N PN MPS P SG Y P Y P+Q Q +Q
Sbjct: 1297 EGNMSTGAPQPNL----MPSNPDSGMYSP------SRYPPQQQQQQQQRHDSYGNQFSTQ 1346
Query: 493 GNVNRPPRPVPVA--------NYPHSPVPGNPTPPMTPGSS---IPPYLS----PSQDVK 537
G + P P NY P+ G PP PY + P Q
Sbjct: 1347 GTPSGSPFPSQQTTMYQQQQQNYKR-PMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQL 1405
Query: 538 PPFPPDIKPNMSALPPPP 555
PP P A P P
Sbjct: 1406 PPAQPQPASQQQAAQPSP 1423
Score = 43.5 bits (101), Expect = 0.001
Identities = 86/368 (23%), Positives = 126/368 (34%), Gaps = 44/368 (11%)
Query: 119 PPGKLPMQPPLSSMSSMKPTLS-HSDGSFPYDSVPWQQNTNQPPGS-LSVVTTVWGVTNT 176
P G + P ++ P +S +P QQ + G+ S T G
Sbjct: 1296 PEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFP 1355
Query: 177 SQSQVL-GNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYI- 234
SQ + N PM+ P A + P GQ Q + PAQP
Sbjct: 1356 SQQTTMYQQQQQNYKRPMDGTYGPPAK--RHEGEMYSVPYSTGQGQPQQQQLPPAQPQPA 1413
Query: 235 --QQSMYGRPNYPGSGGFGASYPGGPNA-----PAGMGIPPHTRPPADFTQPAAAAAAAA 287
QQ+ P +G +YP A PAG P + P F + +A
Sbjct: 1414 SQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAG---GPQNQFPFQFGRDRVSAPPGT 1470
Query: 288 VAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMN 347
A A+ + Q + Q G T Y ++ P+GPA G +
Sbjct: 1471 NAQQNMPPQMMGGPIQASAEVAQQGTMWQ-GRNDMTYNYANRQSTGSAPQGPAYHGVNRT 1529
Query: 348 PASMAA-------GMTPS-GMSGPPMGMNQPRPPGISPFGTHGQ-------RMPQQTYPG 392
+ G PS G PP G + P PP P ++ Q +PQ + P
Sbjct: 1530 DEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPA 1589
Query: 393 PRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRP------LTSPNYP 446
P P+ P++N R P + + + P P + AP P +P +T P P
Sbjct: 1590 PLPR--PMEN--RTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPVQPPMIRRDITFP--P 1643
Query: 447 GQRMPSQP 454
G +QP
Sbjct: 1644 GSVEATQP 1651
Score = 43.1 bits (100), Expect = 0.001
Identities = 66/290 (22%), Positives = 92/290 (31%), Gaps = 56/290 (19%)
Query: 258 PNAPAGMGIPPHTRPP----ADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKD 313
P A + +G PP P A+ Q A AA AAAA A AA QE++
Sbjct: 7 PAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKA----AAGQESEGPA 62
Query: 314 INQYGPMGPTQAYNSQFMNQPGPRGPASMGGS-----------------------MNPAS 350
+ P+G ++ G G S GG P
Sbjct: 63 VGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPG 122
Query: 351 MAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMP-----------QQTYPGPRPQSLP 399
G + G+ PP PP FG R P Q + G + L
Sbjct: 123 GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLA 182
Query: 400 IQNI-----KRPYPG------EPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQ 448
PY G + + N QY NS +P + YP P P L+SP
Sbjct: 183 ALQSGGGGGLEPYAGPQQNSHDHGFPNHQY--NSYYPNR-SAYPPPAPAYALSSPRGGTP 239
Query: 449 RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRP 498
+ ++G PPP+ + F Q G + + G +P
Sbjct: 240 GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQP 289
Score = 39.7 bits (91), Expect = 0.015
Identities = 45/167 (26%), Positives = 54/167 (32%), Gaps = 31/167 (18%)
Query: 866 GPGPSPYPLPPPP---------------GGTN--SNDYSSQGNNYQGHGNFDFPHGNPGG 908
G G P P P GGTN S QGHG P+G+
Sbjct: 368 GGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTP 427
Query: 909 TSMNDFMHGPPQ-----LSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGL 963
M G Q LS+ +P + P + Q P+ + PHP QQ
Sbjct: 428 QRYPMTMQGRAQSAMGGLSYTQQIP--PYGQQGPSGYGQQGQTPYY-NQQSPHPQQQQ-- 482
Query: 964 HVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNP 1010
P PP A P QP QPPQ S P+S P
Sbjct: 483 ----PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQP 525
Score = 35.8 bits (81), Expect = 0.22
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 30/149 (20%)
Query: 873 PLPPPPGGTNSND---YSSQGNNYQG----HGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
P P G N D ++ Q N++G HG P+G P P PP
Sbjct: 1518 PQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYG-PSAPVPPMTRPPPSNYQPPP 1576
Query: 926 DMPNNMAALEKP--LSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPP 983
M N++ + P L PM+ ++ PS LH ++GPP+ S P
Sbjct: 1577 SMQNHIPQVSSPAPLPRPME---------NRTSPSKSPFLHSGMKMQKAGPPVPASHIAP 1627
Query: 984 PPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
P QPP D+TF P S
Sbjct: 1628 APV-----QPPMI------RRDITFPPGS 1645
Score = 30.8 bits (68), Expect = 7.1
Identities = 40/179 (22%), Positives = 54/179 (30%), Gaps = 20/179 (11%)
Query: 841 PSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDY---SSQGNNYQGHG 897
PS S S + GP + P P N S YQG+
Sbjct: 253 PSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYP 312
Query: 898 NFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHP 957
D+ G G + GP ++ AA S Q+ HA S
Sbjct: 313 GGDYSGGPQDGGAGK----GPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMS----- 363
Query: 958 SIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG 1016
P S G PL + P P Q + PQ ++P+S PS +G
Sbjct: 364 --------PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQG 414
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 84.7 bits (208), Expect = 4e-16
Identities = 109/446 (24%), Positives = 144/446 (32%), Gaps = 77/446 (17%)
Query: 120 PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQS 179
P + PP + + LS G P + PP S + ++ +++S +
Sbjct: 217 PNRSAYPPPAPAYA-----LSSPRGGTPGSGAAAAAGSKPPPSSSASASS----SSSSFA 267
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMY 239
Q M GG P + T N L SP S
Sbjct: 268 QQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPS---------------------SAR 306
Query: 240 GRPNYPGSGGFGASYPGGP-NAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATAT 298
G YPG Y GGP + AG G PAD AAAAA AAAAA+ A
Sbjct: 307 GYQGYPGG-----DYSGGPQDGGAGKG-------PADMASQCWGAAAAAAAAAAASGGA- 353
Query: 299 ATATVAALQETQNKDINQYGPMGPTQAYNS--QFMNQPGPRGPASMGGSMNPASMAAGMT 356
+ + + PM P + P P P G M P
Sbjct: 354 -------------QQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNP 400
Query: 357 PSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQ 416
S GPP G Q P+G+ + T G ++ + + P G
Sbjct: 401 YSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPS 460
Query: 417 QYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFN 476
YG Q P Q P P +P S P Q +QPS Q P +P Q
Sbjct: 461 GYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQS--------QPPQLQ 512
Query: 477 GQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDV 536
SS YSQ ++PP A YP P P S P SP Q
Sbjct: 513 --------SSQPPYSQ-QPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQ 563
Query: 537 KPPFP-PDIKPNMSALPPPPANHNDE 561
+P P P +A P P + + +
Sbjct: 564 QPQQPAPSTLSQQAAYPQPQSQQSQQ 589
Score = 66.2 bits (160), Expect = 2e-10
Identities = 117/474 (24%), Positives = 162/474 (34%), Gaps = 95/474 (20%)
Query: 111 HQKSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTV 170
+Q+ QS PP QPP S S P H PY S Q T Q P S
Sbjct: 500 YQQQPQSQPPQLQSSQPPYSQQPSQPP---HQQSPAPYPS--QQSTTQQHPQS------- 547
Query: 171 WGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPA 230
SQ P P P + P S Q QQ +S + P
Sbjct: 548 ----QPPYSQPQAQSPYQQQQPQQPA--PSTLSQQAAYPQPQSQQ--SQQTAYSQQRFPP 599
Query: 231 QPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAA 290
+ Q +G + S S GG M + +R P+ + + +
Sbjct: 600 PQELSQDSFG--SQASSAPSMTSSKGGQE---DMNLSLQSR-PSSLPDLSGSIDDLPMGT 653
Query: 291 AAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPAS 350
A + +T+ +++ Q Q+ P Q S F P P G S +P
Sbjct: 654 EGALSPGVSTSGISSSQGEQS---------NPAQ---SPFSPHTSPHLPGIRGPSPSPV- 700
Query: 351 MAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGE 410
G P + Q R +SP G +MP PRP S +I P +
Sbjct: 701 -----------GSPASVAQSRSGPLSPAAVPGNQMP------PRPPSGQSDSIMHPSMNQ 743
Query: 411 PNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYY 470
+ Q G + P P QY +P P L+ P QPS GQ MG Y
Sbjct: 744 SSIA-QDRGYMQRNPQMP-QYSSPQPGSALS---------PRQPSGGQI---HTGMGSY- 788
Query: 471 KPEQFNGQNNTFSGSSYSNYSQGNVNRPP--RPVPVANYPHSPVPGNPTPPMTPGS---- 524
+Q + + G Y QG R P +P ANYP + + G P G
Sbjct: 789 --QQNSMGSYGPQGGQYG--PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ 844
Query: 525 -SIPPY-------LSPSQDVKPPFPPDIKPNM-----SALPPPPANHNDELRLT 565
IPPY +S + P+ P++ NM S + PPP N + + T
Sbjct: 845 PGIPPYGTLPPGRMSHASMGNRPYGPNM-ANMPPQVGSGMCPPPGGMNRKTQET 897
Score = 57.0 bits (136), Expect = 9e-08
Identities = 118/461 (25%), Positives = 150/461 (32%), Gaps = 138/461 (29%)
Query: 217 AGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNA--------------PA 262
AGQ+ + A GP QP ++ G + G GG GA GGP A PA
Sbjct: 54 AGQESEGPA-VGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPA 112
Query: 263 ------------------GMGIPPHTR-----PPA-DFTQPAAAAAAAAVAAAAAT---- 294
G+G PPH+ PPA F QP + +A AAAAA
Sbjct: 113 LNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQ 172
Query: 295 ATATATATVAALQETQNKDINQY-GPMG-------PTQAYNSQFMNQPG--PRGPASMGG 344
+ +AALQ + Y GP P YNS + N+ P PA
Sbjct: 173 HGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALS 232
Query: 345 SMNPASMAAGMTPSGMSGPPMGMNQPRPPGISP-----FGTHGQRMPQQTYPG-PRPQSL 398
S + +G + S PP + S FG G P G P+P +
Sbjct: 233 SPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTAT 292
Query: 399 PIQN--IKRP--------YPGEPNYGNQQYGPNSQFP----------------------- 425
P N + P YPG G Q G + P
Sbjct: 293 PTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGG 352
Query: 426 TQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGS 485
Q + AP P P R P QPSS P MG+ +P+ + G N
Sbjct: 353 AQQRSHHAPMSPGSSGGGGQPLARTP-QPSS-----PMDQMGK-MRPQPYGGTN------ 399
Query: 486 SYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTP---PMTP-------------GSSIPPY 529
YSQ P P YP P G+ TP PMT IPPY
Sbjct: 400 ---PYSQ-QQGPPSGPQQGHGYPGQPY-GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPY 454
Query: 530 ------------LSPSQDVKPPFPPDIKPNMSALPPPPANH 558
+P + + P P +P S PP H
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPH 495
Score = 48.1 bits (113), Expect = 4e-05
Identities = 71/291 (24%), Positives = 88/291 (30%), Gaps = 82/291 (28%)
Query: 334 PGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRP-----PGISPFGTHG------ 382
P P G SM G P S ++ M G PP + P PG+S + G
Sbjct: 1133 PSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFN 1192
Query: 383 --------QRMPQQTYPGPRPQ--------SLPIQNIKRPY------PGE---------- 410
+R PG +P + + K PY PG
Sbjct: 1193 DGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGP 1252
Query: 411 -------------PNYGNQQYGPNSQFP---------TQPGQYPAPNPPRPLTSPNYPGQ 448
P GN GP +P T+PG P N PN
Sbjct: 1253 NGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNL--- 1309
Query: 449 RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRP-VPVANY 507
MPS P SG Y P Y P+Q Q +QG + P P Y
Sbjct: 1310 -MPSNPDSGMYSP------SRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMY 1362
Query: 508 PHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANH 558
+P P P + SPS K PF A PP PA+H
Sbjct: 1363 QQQQQVSSPAPLPRP---MENRTSPS---KSPFLHSGMKMQKAGPPVPASH 1407
Score = 46.6 bits (109), Expect = 1e-04
Identities = 101/425 (23%), Positives = 145/425 (34%), Gaps = 61/425 (14%)
Query: 128 PLSSMSSMKPTLSHSDGSFPYD------SVPWQQN--TNQPPGSLSVVTTVWGVTNTSQS 179
P+ M M+P G+ PY S P Q + QP GS + + +QS
Sbjct: 383 PMDQMGKMRP--QPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQS 440
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTSNPGLN--SPQFAGQQQQFSAKAGPAQPYIQQS 237
+ G P G P G P N SP QQ +S + P+ Q S
Sbjct: 441 AMGGLSYTQQIPPYGQQG-PSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPS 499
Query: 238 MYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATA 297
+P S P P + PP+++ P+ QP + A + +T
Sbjct: 500 YQQQPQ---------SQP--PQLQSSQ--PPYSQQPS---QPPHQQSPAPYPSQQSTTQQ 543
Query: 298 TATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTP 357
+ Q Q P P + SQ P P+ S S P
Sbjct: 544 HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQ---QTAYSQQRFPPP 600
Query: 358 SGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLP-----IQNIKRPYPGEPN 412
+S G P ++ + G + RP SLP I ++ G +
Sbjct: 601 QELSQDSFGSQASSAPSMT--SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS 658
Query: 413 YGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPS-----------QPSSGQYPP 461
G G +S Q PA +P P TSP+ PG R PS Q SG P
Sbjct: 659 PGVSTSGISSSQGEQSN--PAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSP 716
Query: 462 PTVNMGQYYKPEQFNGQNNTFSGSSYSNYS----QGNVNRPPRPVPVANYPHSPVPGNPT 517
V G P +GQ+++ S + S +G + R P+ + Y SP PG+
Sbjct: 717 AAV-PGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQ---MPQY-SSPQPGSAL 771
Query: 518 PPMTP 522
P P
Sbjct: 772 SPRQP 776
Score = 45.8 bits (107), Expect = 2e-04
Identities = 52/198 (26%), Positives = 70/198 (35%), Gaps = 20/198 (10%)
Query: 839 GIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGN 898
G P + + + +P + M +A+G G S PP G + Y QG + N
Sbjct: 416 GYPGQPYGSQTPQRYPMTMQGRAQSAMG-GLSYTQQIPPYGQQGPSGYGQQGQT--PYYN 472
Query: 899 FDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNM--AALEKPLSHPMQETMPHAGSSDQPH 956
PH PP PP + + ++P S P Q S QP
Sbjct: 473 QQSPHPQ---------QQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPS 523
Query: 957 PSIQQGLHVPHPSSQSGPPLHHSGAPP--PPPSQPP---RQPPQAAPSSHPHSDLTFNPS 1011
Q P+PS QS H PP P +Q P +QP Q APS+ P
Sbjct: 524 QPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQ 583
Query: 1012 SALEGQAGAQGASDMPEP 1029
S + Q A P P
Sbjct: 584 SQ-QSQQTAYSQQRFPPP 600
Score = 43.1 bits (100), Expect = 0.001
Identities = 66/290 (22%), Positives = 92/290 (31%), Gaps = 56/290 (19%)
Query: 258 PNAPAGMGIPPHTRPP----ADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKD 313
P A + +G PP P A+ Q A AA AAAA A AA QE++
Sbjct: 7 PAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKA----AAGQESEGPA 62
Query: 314 INQYGPMGPTQAYNSQFMNQPGPRGPASMGGS-----------------------MNPAS 350
+ P+G ++ G G S GG P
Sbjct: 63 VGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTEPPG 122
Query: 351 MAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMP-----------QQTYPGPRPQSLP 399
G + G+ PP PP FG R P Q + G + L
Sbjct: 123 GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLA 182
Query: 400 IQNI-----KRPYPG------EPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQ 448
PY G + + N QY NS +P + YP P P L+SP
Sbjct: 183 ALQSGGGGGLEPYAGPQQNSHDHGFPNHQY--NSYYPNR-SAYPPPAPAYALSSPRGGTP 239
Query: 449 RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRP 498
+ ++G PPP+ + F Q G + + G +P
Sbjct: 240 GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQP 289
Score = 39.7 bits (91), Expect = 0.015
Identities = 45/167 (26%), Positives = 54/167 (32%), Gaps = 31/167 (18%)
Query: 866 GPGPSPYPLPPPP---------------GGTN--SNDYSSQGNNYQGHGNFDFPHGNPGG 908
G G P P P GGTN S QGHG P+G+
Sbjct: 368 GGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTP 427
Query: 909 TSMNDFMHGPPQ-----LSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGL 963
M G Q LS+ +P + P + Q P+ + PHP QQ
Sbjct: 428 QRYPMTMQGRAQSAMGGLSYTQQIP--PYGQQGPSGYGQQGQTPYY-NQQSPHPQQQQ-- 482
Query: 964 HVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNP 1010
P PP A P QP QPPQ S P+S P
Sbjct: 483 ----PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQP 525
Score = 36.2 bits (82), Expect = 0.17
Identities = 42/180 (23%), Positives = 61/180 (33%), Gaps = 39/180 (21%)
Query: 833 IKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNN 892
++ +P P T +P +MP+ + SP PP + S GN
Sbjct: 1288 VRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMY-----SPSRYPPQQQQQQQQRHDSYGNQ 1342
Query: 893 YQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSS 952
+ G P G+P + Q+S P PL PM+
Sbjct: 1343 FSTQGT---PSGSPFPSQQTTMYQQQQQVSSPA-----------PLPRPME--------- 1379
Query: 953 DQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
++ PS LH ++GPP+ S P P QPP D+TF P S
Sbjct: 1380 NRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPV-----QPPMI------RRDITFPPGS 1428
Score = 30.8 bits (68), Expect = 7.1
Identities = 40/179 (22%), Positives = 54/179 (30%), Gaps = 20/179 (11%)
Query: 841 PSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDY---SSQGNNYQGHG 897
PS S S + GP + P P N S YQG+
Sbjct: 253 PSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYP 312
Query: 898 NFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHP 957
D+ G G + GP ++ AA S Q+ HA S
Sbjct: 313 GGDYSGGPQDGGAGK----GPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMS----- 363
Query: 958 SIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG 1016
P S G PL + P P Q + PQ ++P+S PS +G
Sbjct: 364 --------PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQG 414
>gi|7706637 protein inhibitor of activated STAT, 1 [Homo sapiens]
Length = 651
Score = 82.8 bits (203), Expect = 2e-15
Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 54/369 (14%)
Query: 499 PRPVPVANYPHSPVPGNPTPPMTP-----GSSIPPYLSPSQDVKPPFPPDIKPNMSALPP 553
P + + N SP+P +P P G L P + P ++ SAL P
Sbjct: 72 PADLSIPNVHSSPMPATLSPSTIPQLTYDGHPASSPLLPVSLLGPKHELELPHLTSALHP 131
Query: 554 PPANHNDELRLTFPVRDGVVLEPFRLEHNLAVSNH--------VFHLRPTVHQTLMWRSD 605
H D P D +L+ +LA N F L P Q + D
Sbjct: 132 V---HPDIKLQKLPFYD--LLDELIKPTSLASDNSQRFRETCFAFALTPQQVQQISSSMD 186
Query: 606 L-----------ELQFKCYHHEDRQMNTNWPASVQVSVNATPLTI-------ERG-DNKT 646
+ +L+F C ++P ++ V VN P ++ + G + K
Sbjct: 187 ISGTKCDFTVQVQLRF-CLSETSCPQEDHFPPNLCVKVNTKPCSLPGYLPPTKNGVEPKR 245
Query: 647 SHKPLHLKHVCQPGR---NTIQITVTA-CCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPA 702
+P+++ + + NTI ++ TA ++ + LV + S +LQ L K +
Sbjct: 246 PSRPINITSLVRLSTTVPNTIVVSWTAEIGRNYSMAVYLVKQLSSTVLLQRLRAKGIRNP 305
Query: 703 EHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCKHVQ 762
+H IK T + + + T+++VSL CP+ R+ +P R C H+Q
Sbjct: 306 DHSRALIKEKL----------TADPDSEIATTSLRVSLLCPLGKMRLTIPCRALTCSHLQ 355
Query: 763 CFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWGILNAIQHSEFEEVTIDPTCSW 822
CFD Y+Q+N ++ TW CPVC+K A E L +D IL ++ +E+ +W
Sbjct: 356 CFDATLYIQMNEKKPTWVCPVCDKKAPYEHLIIDGLFMEILKYC--TDCDEIQFKEDGTW 413
Query: 823 RPVPIKSDL 831
P+ K ++
Sbjct: 414 APMRSKKEV 422
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 77.4 bits (189), Expect = 7e-14
Identities = 104/381 (27%), Positives = 130/381 (34%), Gaps = 51/381 (13%)
Query: 213 SPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAG--MGIPPHT 270
SP Q + G +P S G+P P G + P GP P G G PP
Sbjct: 28 SPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQG 85
Query: 271 -RPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQ 329
P P + + + + N+ P G Q Q
Sbjct: 86 GNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 145
Query: 330 FMNQPG-------PRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPR---PPGISPFG 379
N+P P+GP G + + +S + P G PP G NQP+ PP P G
Sbjct: 146 GGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP--PPQGGNQPQGPPPPPGKPQG 203
Query: 380 T--HGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPP 437
G PQ P +PQ P Q + G Q GP Q QP Q P P P
Sbjct: 204 PPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQ-GPPPQGGNQP-QGPPPPPG 261
Query: 438 RPLTSPNYPGQRM--PSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQG-- 493
+P P G + P P Q PPP G + + S S QG
Sbjct: 262 KPQGPPPQGGNKPQGPPPPGKPQGPPP-------------QGGSKSRSSRSPPGKPQGPP 308
Query: 494 --NVNRPPRPVPVANYPHSPVP--GN----PTPPMTPGSSIPPYLSPSQDV-----KPPF 540
N+P P P P P P GN P PP P P S S+ KP
Sbjct: 309 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQG 368
Query: 541 PPDIKPNMSALPPPPANHNDE 561
PP + N PPPPA N +
Sbjct: 369 PPQQEGNNPQGPPPPAGGNPQ 389
Score = 67.0 bits (162), Expect = 9e-11
Identities = 109/405 (26%), Positives = 127/405 (31%), Gaps = 93/405 (22%)
Query: 183 GNPMANANNPMNPGGNPMASGMTTSNP--GLNSPQFAGQQQQFSAKAGPAQPYIQQSMYG 240
G P N P P P G P G N PQ G + P Q +S
Sbjct: 59 GPPPQGGNQPQGP---PPPPGKPQGPPPQGGNKPQ--GPPPPGKPQGPPPQGDKSRSPRS 113
Query: 241 RPNYP-GSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATA 299
P P G G + P GP P G P PP +P
Sbjct: 114 PPGKPQGPPPQGGNQPQGPPPPPGK---PQGPPPQGGNKPQGPPPPGKPQGPPP------ 164
Query: 300 TATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPG--------PRGPASMGGSMN---- 347
+ NK + P G Q Q NQP P+GP GG+
Sbjct: 165 --------QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 216
Query: 348 PASMAAGMTPSG--------------MSGPPMGMNQPR---PPGISPFGT--HGQRMPQQ 388
P G P G PP G NQP+ PP P G G PQ
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 276
Query: 389 TYPGPRPQSLPIQN-----IKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSP 443
P +PQ P Q R PG+P GP Q QP Q P P P +P P
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQ------GPPPQGGNQP-QGPPPPPGKPQGPP 329
Query: 444 NYPGQRM--PSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRP 501
G + P P Q PPP G + + S S QG PP+
Sbjct: 330 PQGGNKPQGPPPPGKPQGPPP-------------QGGSKSRSARSPPGKPQG----PPQ- 371
Query: 502 VPVANYPHSPVP---GNPTPPMTPGSSIPP-YLSPSQDVKPPFPP 542
N P P P GNP P P + P P Q +P PP
Sbjct: 372 -QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
Score = 45.1 bits (105), Expect = 4e-04
Identities = 43/154 (27%), Positives = 50/154 (32%), Gaps = 30/154 (19%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQ------------GNNYQGHGNFDFPHGNPGGTSMN- 912
GP P P PPP G N + + GN QG P G P G
Sbjct: 214 GPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP---PPGKPQGPPPQG 270
Query: 913 -DFMHGPPQLSHPPDMPNNMAALEKPLSHPM---QETMPHAGSSDQPHPSIQQGLHVPHP 968
+ GPP P P + + P Q P G+ Q P P P
Sbjct: 271 GNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPP--------PPP 322
Query: 969 SSQSGPPLHHSGAP--PPPPSQPPRQPPQAAPSS 1000
GPP P PPPP +P PPQ S
Sbjct: 323 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/140 (30%), Positives = 48/140 (34%), Gaps = 22/140 (15%)
Query: 875 PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPP-QLSHPPDMPNNMAA 933
PPPP G GN QG P G P + PP + PP N
Sbjct: 71 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ 130
Query: 934 LEKPLSHPMQETMPHAGSSDQ--PHPSIQQGLHVPHP-------SSQS------GPPLHH 978
P Q P G+ Q P P QG P P SS+S GPP
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGDNKSRSSRSPPGKPQGPPPQG 187
Query: 979 SG---APPPPPSQPPRQPPQ 995
PPPPP +P PPQ
Sbjct: 188 GNQPQGPPPPPGKPQGPPPQ 207
Score = 41.6 bits (96), Expect = 0.004
Identities = 45/162 (27%), Positives = 50/162 (30%), Gaps = 37/162 (22%)
Query: 875 PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNP--GGTSMNDFMHGPPQLSHPPDMPNNMA 932
PPPP G GN QG P G P GG+ P + PP N
Sbjct: 256 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP 315
Query: 933 ALEKPLSHPMQETMPHAGSSDQ--PHPSIQQGLHVPHPSSQS-------------GPPLH 977
P Q P G+ Q P P QG P P S GPP
Sbjct: 316 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG---PPPQGGSKSRSARSPPGKPQGPPQQ 372
Query: 978 HSGAP--PPPPS---------------QPPRQPPQAAPSSHP 1002
P PPPP+ Q P +PPQ S P
Sbjct: 373 EGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
Score = 41.2 bits (95), Expect = 0.005
Identities = 40/131 (30%), Positives = 45/131 (34%), Gaps = 33/131 (25%)
Query: 904 GNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGL 963
GNP G PPQ + P P + KP P P G+ Q P
Sbjct: 34 GNPQGA--------PPQGGNKPQGPPSPPG--KPQGPP-----PQGGNQPQGPP------ 72
Query: 964 HVPHPSSQSGPPLHHSGAP--PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG---QA 1018
P P GPP P PPPP +P PPQ S P S P +G Q
Sbjct: 73 --PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS-----PPGKPQGPPPQG 125
Query: 1019 GAQGASDMPEP 1029
G Q P P
Sbjct: 126 GNQPQGPPPPP 136
Score = 38.9 bits (89), Expect = 0.026
Identities = 46/179 (25%), Positives = 54/179 (30%), Gaps = 23/179 (12%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSS------QGNNYQGHGNFDFPHGNPGGTSMNDFMHGPP 919
GP P P PPP G N + S QG QG P PG PP
Sbjct: 152 GPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ-----GPPP 206
Query: 920 QLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHS 979
Q + P P + P ++ +P QG + P PP
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGN--QPQGPPPPPGKPQ 264
Query: 980 GAP---------PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP 1029
G P PPPP +P PPQ S P Q G Q P P
Sbjct: 265 GPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGP-PPQGGNQPQGPPPPP 322
Score = 38.1 bits (87), Expect = 0.045
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 26/123 (21%)
Query: 875 PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNP--GGTSMNDFMHGPPQLSHPPDMPNNMA 932
PPPP G GN QG P G P GG+ P + PP N
Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGN-- 375
Query: 933 ALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQ 992
+P P G+ QP Q+ P G P PP P +
Sbjct: 376 -------NPQGPPPPAGGNPQQP---------------QAPPAGQPQGPPRPPQGGRPSR 413
Query: 993 PPQ 995
PPQ
Sbjct: 414 PPQ 416
Score = 37.0 bits (84), Expect = 0.099
Identities = 49/174 (28%), Positives = 53/174 (30%), Gaps = 37/174 (21%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMN--DFMHGPPQLSHP 924
P P P PPP G GN QG P G P G + GPP P
Sbjct: 51 PSPPGKPQGPPPQG---------GNQPQGPPP---PPGKPQGPPPQGGNKPQGPPPPGKP 98
Query: 925 PDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAP-- 982
P P S P + P +QP QG P P PP G P
Sbjct: 99 QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP-----QG---PPP-----PPGKPQGPPPQ 145
Query: 983 -------PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP 1029
PPPP +P PPQ S P Q G Q P P
Sbjct: 146 GGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGP-PPQGGNQPQGPPPPP 198
Score = 37.0 bits (84), Expect = 0.099
Identities = 46/178 (25%), Positives = 53/178 (29%), Gaps = 22/178 (12%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSS-----QGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQ 920
GP P P PPP G S S QG QG P PG PPQ
Sbjct: 91 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ-----GPPPQ 145
Query: 921 LSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSG 980
+ P P + P ++ +P QG + P PP G
Sbjct: 146 GGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGN--QPQGPPPPPGKPQG 203
Query: 981 AP---------PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP 1029
P PPPP +P PPQ S P Q G Q P P
Sbjct: 204 PPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGP-PPQGGNQPQGPPPPP 260
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 72.8 bits (177), Expect = 2e-12
Identities = 86/303 (28%), Positives = 109/303 (35%), Gaps = 46/303 (15%)
Query: 300 TATVAALQETQN--KDINQY--------GPMGPTQAYNSQFMNQPGP----RGPASMGGS 345
+ + AL QN +D++Q P GP+ ++ P P +GP GG+
Sbjct: 7 SVALLALSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGN 66
Query: 346 MN----PASMAAGMTPSG-------------MSGPPMGMNQPR---PPGISPFGT--HGQ 383
P G P G PP G NQP+ PP P G G
Sbjct: 67 KPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGG 126
Query: 384 RMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSP 443
PQ P +PQ P Q K P P + GP Q QP Q P P P +P P
Sbjct: 127 NRPQGPPPPGKPQGPPPQGDKSRSPRSPP--GKPQGPPPQGGNQP-QGPPPPPGKPQGPP 183
Query: 444 NYPGQRM--PSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRP 501
G++ P P Q PPP + + + Q G + +P P
Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 243
Query: 502 VPVA-NYPHSPVP-GNPT-PPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANH 558
P N P P P G P PP GS SP KP PP + N PPPPA
Sbjct: 244 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPG--KPQGPPQQEGNNPQGPPPPAGG 301
Query: 559 NDE 561
N +
Sbjct: 302 NPQ 304
Score = 63.5 bits (153), Expect = 1e-09
Identities = 72/242 (29%), Positives = 85/242 (35%), Gaps = 26/242 (10%)
Query: 319 PMGPTQAYNSQFMNQPGP----RGPASMGGSMNPASMAAGMTPSGMSGPPMG--MNQPRP 372
P GP +Q P P +GP GG+ G P G PP G PR
Sbjct: 97 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGK-PQGP--PPQGDKSRSPRS 153
Query: 373 PGISPFGT--HGQRMPQQTYPGP-RPQSLPIQNIKRPY----PGEPNYGNQQYGPNSQFP 425
P P G G PQ P P +PQ P Q K+P PG+P G G S+
Sbjct: 154 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ-GPPPQGDKSRSS 212
Query: 426 TQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGS 485
P P PP+ P P P P Q PPP P Q G
Sbjct: 213 QSPPGKPQGPPPQGGNQPQGP----PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGG 268
Query: 486 SYSNYSQGNVNRPP-RPVPVANYPHSPVP---GNPTPPMTPGSSIPP-YLSPSQDVKPPF 540
S S ++ +P P N P P P GNP P P + P P Q +P
Sbjct: 269 SKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSR 328
Query: 541 PP 542
PP
Sbjct: 329 PP 330
Score = 48.5 bits (114), Expect = 3e-05
Identities = 52/179 (29%), Positives = 58/179 (32%), Gaps = 43/179 (24%)
Query: 861 MIAALGPGPSPY-----PLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFM 915
+IA GPSP PPPP G GN QG P G P G
Sbjct: 31 LIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPP----PPGKPQG------- 79
Query: 916 HGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPP 975
PP + + P P Q P G+ Q P P P GPP
Sbjct: 80 --------PPPQGDKSRSPRSPPGKP-QGPPPQGGNQPQGPP--------PPPGKPQGPP 122
Query: 976 LHHSGAP--PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG---QAGAQGASDMPEP 1029
P PPPP +P PPQ S P S P +G Q G Q P P
Sbjct: 123 PQGGNRPQGPPPPGKPQGPPPQGDKSRSPRS-----PPGKPQGPPPQGGNQPQGPPPPP 176
Score = 47.0 bits (110), Expect = 1e-04
Identities = 54/179 (30%), Positives = 59/179 (32%), Gaps = 26/179 (14%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGH----GNFDF----PHGNPGGTSMN--DFM 915
GP P P PPP G S S QG GN P G P G +
Sbjct: 70 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRP 129
Query: 916 HGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPP 975
GPP P P P S P + P +QP QG P P GPP
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP-----QG-PPPPPGKPQGPP 183
Query: 976 LHHSGAP--PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG---QAGAQGASDMPEP 1029
P PPPP +P PPQ S S P +G Q G Q P P
Sbjct: 184 PQGGKKPQGPPPPGKPQGPPPQGDKSRSSQS-----PPGKPQGPPPQGGNQPQGPPPPP 237
Score = 43.1 bits (100), Expect = 0.001
Identities = 44/150 (29%), Positives = 50/150 (33%), Gaps = 24/150 (16%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGH----GNFDF----PHGNPGGTSMNDFM-- 915
GP P P PPP G S S QG GN P G P G
Sbjct: 131 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 916 HGPP---QLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQS 972
GPP + PP + + + P P Q P G+ Q P P P
Sbjct: 191 QGPPPPGKPQGPPPQGDKSRSSQSPPGKP-QGPPPQGGNQPQGPP--------PPPGKPQ 241
Query: 973 GPPLHHSGAP--PPPPSQPPRQPPQAAPSS 1000
GPP P PPPP +P P Q S
Sbjct: 242 GPPPQGGNKPQGPPPPGKPQGPPAQGGSKS 271
Score = 40.4 bits (93), Expect = 0.009
Identities = 39/143 (27%), Positives = 49/143 (34%), Gaps = 11/143 (7%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSS-----QGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQ 920
GP P P PPP G S S QG QG P PG PPQ
Sbjct: 192 GPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ-----GPPPQ 246
Query: 921 LSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPH-PSIQQGLHVPHPSSQSGPPLHHS 979
+ P P + P + ++ +P P Q+G + P +G
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306
Query: 980 GAPPPPPSQPPRQPPQAAPSSHP 1002
APP Q P +PPQ S P
Sbjct: 307 QAPPAGQPQGPPRPPQGGRPSRP 329
Score = 38.1 bits (87), Expect = 0.045
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 26/123 (21%)
Query: 875 PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNP--GGTSMNDFMHGPPQLSHPPDMPNNMA 932
PPPP G GN QG P G P GG+ P + PP N
Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN-- 290
Query: 933 ALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQ 992
+P P G+ QP Q+ P G P PP P +
Sbjct: 291 -------NPQGPPPPAGGNPQQP---------------QAPPAGQPQGPPRPPQGGRPSR 328
Query: 993 PPQ 995
PPQ
Sbjct: 329 PPQ 331
Score = 37.4 bits (85), Expect = 0.076
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 921 LSHPPDMPNNMAALEKP--LSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHH 978
LS ++ +++ E P ++ Q P G+ Q P P P GPP
Sbjct: 13 LSSAQNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPP--------PPPGKPQGPPPQG 64
Query: 979 SGAP--PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG---QAGAQGASDMPEP 1029
P PPPP +P PPQ S P S P +G Q G Q P P
Sbjct: 65 GNKPQGPPPPGKPQGPPPQGDKSRSPRS-----PPGKPQGPPPQGGNQPQGPPPPP 115
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 70.5 bits (171), Expect = 8e-12
Identities = 76/241 (31%), Positives = 89/241 (36%), Gaps = 38/241 (15%)
Query: 333 QPG-PRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQ---PRPPGISPFGTHGQRMPQQ 388
+PG P GP GG+ + P G PP G NQ P P P G Q Q
Sbjct: 74 RPGKPEGPPPQGGNQSQGPPPRPGKPEGQ--PPQGGNQSQGPPPRPGKPEGPPPQGGNQS 131
Query: 389 TYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTS---PNY 445
P PRP +P P GNQ GP P +PG+ P P S P +
Sbjct: 132 QGPPPRPG--------KPEGPPPQGGNQSQGP----PPRPGKPEGPPPQGGNQSQGPPPH 179
Query: 446 PGQRMPSQPSSG---QYPPPTVNMGQYYKPEQFNGQNNT--FSGSSYSNYSQGNVNRPPR 500
PG+ P G Q PPP + P+ N G SQG N+P
Sbjct: 180 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGG-NKPQG 238
Query: 501 PVPVANYPHSPVP--GN----PTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
P P P P P GN P PP P PP +P Q + PP P PPP
Sbjct: 239 PPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP-----PPP 293
Query: 555 P 555
P
Sbjct: 294 P 294
Score = 58.5 bits (140), Expect = 3e-08
Identities = 78/330 (23%), Positives = 102/330 (30%), Gaps = 52/330 (15%)
Query: 155 QNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLN-- 212
Q+ N+ + + G + Q P P P G P G + P
Sbjct: 17 QSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPG 76
Query: 213 ---SPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGAS-YPGGPNAPAGMGIPP 268
P G Q P +P G+P G+ G PG P P G
Sbjct: 77 KPEGPPPQGGNQSQGPPPRPGKPE------GQPPQGGNQSQGPPPRPGKPEGPPPQGGNQ 130
Query: 269 HTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNS 328
PP +P ++Q P GP +
Sbjct: 131 SQGPPPRPGKPEGPPPQGG-------------------NQSQGPPPRPGKPEGPPPQGGN 171
Query: 329 QFMNQPG----PRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQR 384
Q P P GP GG+ + P G PP G NQ + P P G
Sbjct: 172 QSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGP--PPQGGNQSQGPPPRPGKPEGP- 228
Query: 385 MPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPN 444
P Q G +PQ P P+PG+P Q G Q P PG+ P PP
Sbjct: 229 -PSQG--GNKPQGPP------PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG-----G 274
Query: 445 YPGQRMPSQPSSGQYPPPTVNMGQYYKPEQ 474
P Q +P Q PPP G+ ++P Q
Sbjct: 275 NPQQPLPPPAGKPQGPPPPPQGGRPHRPPQ 304
Score = 57.0 bits (136), Expect = 9e-08
Identities = 73/252 (28%), Positives = 85/252 (33%), Gaps = 56/252 (22%)
Query: 336 PRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQ---PRPPGISPFGTHGQRMPQQTYPG 392
P G GG+ + P G PP G NQ P P P G Q Q P
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGR--PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 93
Query: 393 PRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPG-------------QYPAPNPPRP 439
PRP +P P GNQ GP P +PG Q P P P +P
Sbjct: 94 PRPG--------KPEGQPPQGGNQSQGP----PPRPGKPEGPPPQGGNQSQGPPPRPGKP 141
Query: 440 LTSPNYPG---QRMPSQPSSGQYPPPTV-NMGQYYKPEQFNGQNNTFSGSSYSNYSQGNV 495
P G Q P +P + PPP N Q P + G GN
Sbjct: 142 EGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQG--------GNQ 193
Query: 496 NRPPRPVPVANYPHSPVP--GNPT--PPMTPG--------SSIPPYLSPSQDVKPPFPPD 543
++ P P P P P P GN + PP PG P P KP PP
Sbjct: 194 SQGPPPRP--GKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPP 251
Query: 544 IKPNMSALPPPP 555
+ N PPPP
Sbjct: 252 QEGNKPQRPPPP 263
Score = 52.8 bits (125), Expect = 2e-06
Identities = 64/238 (26%), Positives = 76/238 (31%), Gaps = 60/238 (25%)
Query: 319 PMGPTQAYNSQFMNQPG----PRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQ---PR 371
P GP +Q P P GP GG+ + P G PP G NQ P
Sbjct: 120 PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGP--PPQGGNQSQGPP 177
Query: 372 PPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQY 431
P P G Q Q P PRP +P P GNQ GP + P +P
Sbjct: 178 PHPGKPEGPPPQGGNQSQGPPPRPG--------KPEGPPPQGGNQSQGPPPR-PGKPEGP 228
Query: 432 PAPNPPRPLTSPNYPGQRMPSQPSSG---QYPPPTVNMGQYYKPEQFNGQNNTFSGSSYS 488
P+ +P P +PG+ P G Q PPP
Sbjct: 229 PSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP------------------------- 263
Query: 489 NYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKP 546
G PP P P P G P P PP P Q +P PP +P
Sbjct: 264 ----GRPQGPPPPGGNPQQPLPPPAGKPQGP-------PP---PPQGGRPHRPPQGQP 307
Score = 46.2 bits (108), Expect = 2e-04
Identities = 48/170 (28%), Positives = 52/170 (30%), Gaps = 41/170 (24%)
Query: 868 GPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPP-----QLS 922
G P PPPPG +G QG P PG GPP Q
Sbjct: 44 GNQPQRTPPPPG-------KPEGRPPQGGNQSQGPPPRPGKPE------GPPPQGGNQSQ 90
Query: 923 HPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPL---HHS 979
PP P KP P P G+ Q P P P GPP + S
Sbjct: 91 GPPPRPG------KPEGQP-----PQGGNQSQGPP--------PRPGKPEGPPPQGGNQS 131
Query: 980 GAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP 1029
PPP P +P PPQ S P Q G Q P P
Sbjct: 132 QGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGP-PPQGGNQSQGPPPHP 180
Score = 44.7 bits (104), Expect = 5e-04
Identities = 44/144 (30%), Positives = 53/144 (36%), Gaps = 24/144 (16%)
Query: 868 GPSPYPL----PPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSH 923
GP P+P PPP GG S + +G P G S GPP
Sbjct: 175 GPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEG------PPPQGGNQSQ-----GPPPRPG 223
Query: 924 PPDMPNNMAALEK--PLSHP--MQETMPHAGSSDQ--PHPSIQQGLHVP--HPSSQSGPP 975
P+ P + + P HP Q P G+ Q P P QG P +P PP
Sbjct: 224 KPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP 283
Query: 976 LHH-SGAPPPPPSQPPRQPPQAAP 998
G PPPP P +PPQ P
Sbjct: 284 AGKPQGPPPPPQGGRPHRPPQGQP 307
Score = 43.1 bits (100), Expect = 0.001
Identities = 67/279 (24%), Positives = 84/279 (30%), Gaps = 61/279 (21%)
Query: 192 PMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFS--AKAGPAQPYIQQSMYGRPNYPGSGG 249
P P G P G + P + GQ Q ++ P +P G+P P G
Sbjct: 75 PGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRP-------GKPEGPPPQG 127
Query: 250 FGASY-----PGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVA 304
S PG P P G PP +P
Sbjct: 128 GNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGG----------------- 170
Query: 305 ALQETQNKDINQYGPMGPTQAYNSQFMNQPG----PRGPASMGGSMNPASMAAGMTPSGM 360
++Q + P GP +Q P P GP GG+ S P
Sbjct: 171 --NQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQ---SQGPPPRPGKP 225
Query: 361 SGPP-MGMNQPRPPGISPFGTHGQ-----RMPQQTYPGPRPQSLPIQNIKRPYPGEPNYG 414
GPP G N+P+ P P G PQ+ P RPQ P P G
Sbjct: 226 EGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP-----------PPGG 274
Query: 415 NQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQ 453
N P P G+ P PP P+ P Q P Q
Sbjct: 275 N----PQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPPQ 309
Score = 42.7 bits (99), Expect = 0.002
Identities = 51/183 (27%), Positives = 59/183 (32%), Gaps = 40/183 (21%)
Query: 866 GPGPSP-YPLPPPPGGTNSNDY------SSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGP 918
GP P P P PPP G N + +G QG P +PG GP
Sbjct: 133 GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE------GP 186
Query: 919 P-----QLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVP-----HP 968
P Q PP P + Q P G + P PS QG + P HP
Sbjct: 187 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGP-PS--QGGNKPQGPPPHP 243
Query: 969 SSQSGPPLHHSGAP-----------PPPPSQPPRQ---PPQAAPSSHPHSDLTFNPSSAL 1014
GPP P PPPP P+Q PP P P P
Sbjct: 244 GKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPP 303
Query: 1015 EGQ 1017
+GQ
Sbjct: 304 QGQ 306
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 69.7 bits (169), Expect = 1e-11
Identities = 94/375 (25%), Positives = 126/375 (33%), Gaps = 52/375 (13%)
Query: 189 ANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSG 248
A P +P G+P A+ + P + S K GPA P S+ G P P +
Sbjct: 1037 AATPPSPKGSPAATPLPKGAPTTPAATLP------SPKGGPATP----SLKGAPTPPAAT 1086
Query: 249 GFGASYPGGPNAPAGMG--IPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAAL 306
S GGP P+ G +PP PP+ P A A T AT + L
Sbjct: 1087 P--PSPKGGPATPSPKGAPMPPAATPPS----PKGGLATPPHKGAPTTPAATPPSPKGGL 1140
Query: 307 QETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMG 366
K PT P P+ GG P A TP+ P G
Sbjct: 1141 ATPPPKG-------APTT---------PAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184
Query: 367 -MNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFP 425
+ P P G P+ P P+ P P P G P
Sbjct: 1185 GLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP--TTPAATPPSPKGGLATPSPKGAPT 1242
Query: 426 TQPGQYPAPNPPRPLTSPNYPGQR-MPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSG 484
T PA PP P P P + P+ P++ PP++ G P + +
Sbjct: 1243 T-----PAATPPSPKGGPATPPPKGAPTPPAA---TPPSLKGGLATPPHKGAPNPAVVTP 1294
Query: 485 SSYSNYSQGNVNRPPR--PVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPP 542
S G PP+ P P A P SP G+P P G+ PP ++P P P
Sbjct: 1295 PSPKG---GPATSPPKGAPTPPAATPPSP-KGSPGTPPPKGAPTPPAVTPPSPKGTPTLP 1350
Query: 543 DIKPNMSALPPPPAN 557
P+ P P++
Sbjct: 1351 ATTPSSKGGPTTPSS 1365
Score = 62.8 bits (151), Expect = 2e-09
Identities = 96/389 (24%), Positives = 132/389 (33%), Gaps = 58/389 (14%)
Query: 183 GNPMANANNPMNPGGN---PMASGMTTSNPGLNSPQFAGQQQQFSAKAGP----AQPYIQ 235
G P A P +P G P G T+ P P G S K P A P
Sbjct: 1147 GAPTTPAATPPSPKGGLATPPPKGAPTT-PAATPPSPKGGLATPSPKGAPTTPAATPPSP 1205
Query: 236 QSMYGRPNYPGSGGFGASYP----GGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAA 291
+ P+ G+ A+ P GG P+ G P T P A P A A
Sbjct: 1206 KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP--TTPAATPPSPKGGPATPPPKGA 1263
Query: 292 AATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRG-PASMGGSMNPAS 350
AT + L +K A N + P P+G PA+ P
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKG-----------APNPAVVTPPSPKGGPATSPPKGAPTP 1312
Query: 351 MAAGM-TPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPG 409
AA +P G G P P PP ++P G T P P S G
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGT----PTLPATTPSS----------KG 1358
Query: 410 EPNYGNQQYGPN--SQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMG 467
P + + GP + P+ G PA PP P P P + P+S P
Sbjct: 1359 GPTTPSSKEGPTPPAATPSHKGG-PAMTPPSPKRGPAIPSPK--GDPTSPAVIP------ 1409
Query: 468 QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPP-RPVPVANYPHSPVP-GNPTPPMTPGSS 525
P++ T G++ S+G++ P PV + P + P G P P + G
Sbjct: 1410 --LSPKKAPATPVTREGAATP--SKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDP 1465
Query: 526 IPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
P ++P +PP P + + S P
Sbjct: 1466 TLPAVTPPSPKEPPAPKQVATSSSPKKAP 1494
Score = 56.2 bits (134), Expect = 2e-07
Identities = 104/445 (23%), Positives = 148/445 (33%), Gaps = 101/445 (22%)
Query: 119 PPGKLPMQPPLSSMSSMKPTLSHSDGSF-PYDSVPWQQNTNQPPGSLSVVTTVWGVTNTS 177
PP K P + + ++ +S + SF P +S+ +Q + + P T T S
Sbjct: 808 PPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSP-------ATTHSPTPPS 860
Query: 178 QSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQS 237
G P +A P++P G + T + +N P K GPA P +Q+
Sbjct: 861 PK---GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP---------FPKEGPATPAPKQA 908
Query: 238 MYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATA 297
P +S PA GIP P T PAA + A +
Sbjct: 909 -------PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW 961
Query: 298 TATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTP 357
T A P P + GP P+ G PA A +P
Sbjct: 962 APTPPAAT-------------PPSP----------KGGPATPSPKGAPTPPA--ATPPSP 996
Query: 358 SGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQ 417
G P P PP ++P P P+ P P+P +
Sbjct: 997 KGGPATPSPKGAPTPPAVTP---------------PSPKGSPAAT---PFPKGAST---- 1034
Query: 418 YGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNG 477
P + P P PA P P +P P +PS P G P T ++ P
Sbjct: 1035 --PPAATPPSPKGSPAATP-LPKGAPTTPAATLPS-PKGG---PATPSLKGAPTPP---- 1083
Query: 478 QNNTFSGSSYSNYSQGNVNRPPR--PVPVANYPHSPVPGNPTP-----PMTPGSSIPPYL 530
++ + G P+ P+P A P SP G TP P TP ++ P
Sbjct: 1084 ------AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP--- 1134
Query: 531 SPSQDVKPPFPPDIKPNMSALPPPP 555
SP + P P +A PP P
Sbjct: 1135 SPKGGLATPPPKGAPTTPAATPPSP 1159
Score = 56.2 bits (134), Expect = 2e-07
Identities = 103/459 (22%), Positives = 148/459 (32%), Gaps = 62/459 (13%)
Query: 113 KSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWG 172
K + PP K PP ++ S+K L+ P+ P P T+
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATP----PHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 173 VTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPG------LNSPQFAGQQQQFSAK 226
T + +P + P P G P +T +P +P G S+K
Sbjct: 1308 GAPTPPAATPPSPKGSPGTPP-PKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSK 1366
Query: 227 AGPAQPYIQQSMYGRPNY-PGSGGFGASYP---GGPNAPAGMGIPPHTRPPADFTQPAAA 282
GP P S G P P S G + P G P +PA + + P P T+ AA
Sbjct: 1367 EGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAA 1426
Query: 283 AAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQF--MNQPGPRGPA 340
+ A T +L++ + GP P+ + + P P+ P
Sbjct: 1427 TPSKGDLTPPAV-------TPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479
Query: 341 SMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPI 400
+ P +A +P P M P P + P P+ +P
Sbjct: 1480 A------PKQVATSSSPKKAPATPAPMGAPTLPAVIPSS---------------PKEVPA 1518
Query: 401 QNIKRPYPGEPNYGN-QQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQR-MPSQPSSGQ 458
R P P + P + P + PA P P +P P + P+ PSS +
Sbjct: 1519 TPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKE 1578
Query: 459 YP-PPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPP---RPVPVANYPHSPVPG 514
PP V P + G + S V P P P A P SP G
Sbjct: 1579 ASSPPAVT------PSTYKG-----APSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKG 1627
Query: 515 NPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPP 553
TP + PP S P P + M A P
Sbjct: 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Score = 53.5 bits (127), Expect = 1e-06
Identities = 95/454 (20%), Positives = 148/454 (32%), Gaps = 70/454 (15%)
Query: 128 PLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMA 187
PL S + PT++ +FP +S P ++ T TS +P
Sbjct: 634 PLLKSSLITPTVA----AFPLESAD--------PAGVAPTTA----KGTSTYTTTASPFL 677
Query: 188 NANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGS 247
+ P +P+ G T+ P + + +++ P P Q + +
Sbjct: 678 EGTVSLAPKNHPVKEGTLTTLPLVPT----------ASENCPVAPSPQNTCAPLATLVLA 727
Query: 248 GGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQ 307
S P PAG PP T+ + +A A A+ T + A+AT A+ +
Sbjct: 728 PEIPKSVPSPSLPPAGT--PPGTKKVDGISHTSALAPVASSPKECPTEDSGASAT-ASSK 784
Query: 308 ETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPAS----MGGSMNPAS-MAAGMTPSGMSG 362
T + P+G + + Q P +G A +G +P S + A P
Sbjct: 785 GTLTYLADSPSPLGVS--VSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLS 842
Query: 363 ---------------PPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPI--QNIKR 405
PP P P ++P G +P + P P +LP +
Sbjct: 843 FQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPAT 902
Query: 406 PYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVN 465
P P + + + P P P P +P P PS P P
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPK-- 960
Query: 466 MGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSS 525
+ P + G + +G P P A P SP G P P G+
Sbjct: 961 ----WAPTPPAATPPSPKGGPATPSPKG------APTPPAATPPSP-KGGPATPSPKGAP 1009
Query: 526 IPPYLSP----SQDVKPPFPPDIKPNMSALPPPP 555
PP ++P PFP +A PP P
Sbjct: 1010 TPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Score = 40.4 bits (93), Expect = 0.009
Identities = 38/150 (25%), Positives = 49/150 (32%), Gaps = 21/150 (14%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
G P PP P G+ + +G P G P S+ P + P
Sbjct: 1031 GASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKG---APTPPAATP 1087
Query: 926 DMPNNMAALEKPLSHPMQE------------TMPHAGSSDQPH---PSIQQGLHVPHPSS 970
P A P PM T PH G+ P PS + GL P P
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPK- 1146
Query: 971 QSGPPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
G P + PP P PP+ AP++
Sbjct: 1147 --GAPTTPAATPPSPKGGLATPPPKGAPTT 1174
Score = 37.4 bits (85), Expect = 0.076
Identities = 59/247 (23%), Positives = 76/247 (30%), Gaps = 50/247 (20%)
Query: 818 PTCSWRPVPIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPP 877
P+ W P P + P G P+ T SP P AA P P P P
Sbjct: 957 PSPKWAPTPPAAT---PPSPKGGPA----TPSPKGAPTPP-----AATPPSPKGGPATPS 1004
Query: 878 PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKP 937
P G + + + P G+P T PP + PP + AA P
Sbjct: 1005 PKGAPTPPAVTPPS----------PKGSPAATPFPKGASTPPAAT-PPSPKGSPAATPLP 1053
Query: 938 LSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAA 997
P T P A PS + G P S G P + PP P P P+ A
Sbjct: 1054 KGAP---TTPAATL-----PSPKGG---PATPSLKGAPTPPAATPPSPKGGPATPSPKGA 1102
Query: 998 P--------------SSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNPDEL 1043
P ++ PH P++ G G + P P T P
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG--GLATPPPKGAPTTPAATPPSPK 1160
Query: 1044 LSYLDPP 1050
PP
Sbjct: 1161 GGLATPP 1167
Score = 37.4 bits (85), Expect = 0.076
Identities = 41/168 (24%), Positives = 54/168 (32%), Gaps = 24/168 (14%)
Query: 863 AALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLS 922
AA P P PPP G + ++ P GG + P +
Sbjct: 1153 AATPPSPKGGLATPPPKGAPTTPAAT-------------PPSPKGGLATPSPKGAPTTPA 1199
Query: 923 HPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAP 982
P P A P P T P A PS + GL P P G P + P
Sbjct: 1200 ATPPSPKGGLATPSPKGAP---TTPAATP-----PSPKGGLATPSPK---GAPTTPAATP 1248
Query: 983 PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPS 1030
P P P PP+ AP+ + + A GA + + PS
Sbjct: 1249 PSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS 1296
Score = 35.8 bits (81), Expect = 0.22
Identities = 119/561 (21%), Positives = 170/561 (30%), Gaps = 137/561 (24%)
Query: 117 SDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTN--QPPGSLSVVTTV---- 170
+ PP P P ++ P+ S G+ P P P G+ ++ T
Sbjct: 1303 TSPPKGAPTPP-----AATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSK 1357
Query: 171 WGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQ---FSAKA 227
G T S + P A P + GG M P + SP+ S K
Sbjct: 1358 GGPTTPSSKE---GPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKK 1414
Query: 228 GPAQPYIQQSMYGRPNYPGSGGF--------------GASYP-GGPNAPAGMGIP--PHT 270
PA P ++ P G S P GGP P+ G P P
Sbjct: 1415 APATPVTREGAAT----PSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAV 1470
Query: 271 RPPADFTQPAA--AAAAAAVAAAAATATATATATVAALQETQNKDI-----NQYGPMGPT 323
PP+ PA A +++ A AT T+ A+ + K++ ++ P+ PT
Sbjct: 1471 TPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPT 1530
Query: 324 QAYNSQ---------------FMNQPGPRGP--------ASMGGSMNPASMAAGMTPSGM 360
S+ M P P+ A S AS +TPS
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTY 1590
Query: 361 SGPPMGMNQPRPPGI-SPFGTHGQRMPQQTYPGPR-----------PQSLPIQ-NIKRPY 407
G P PP + SP P T P P P S P+ + +
Sbjct: 1591 KGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDS 1650
Query: 408 PGEPNYGNQQYG----------PNSQFPTQPGQY---PAPNPPRPLTSPNYPGQRMPSQP 454
P P + G P + PT + PAP +T+P G + ++
Sbjct: 1651 PTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQ--TKK 1708
Query: 455 SSGQYPP----PTVNMGQY----------YKPEQFNGQNNTFSGSSYSNYSQGNVNRPPR 500
SS PP P+ G P Q + T G S+ +G + P
Sbjct: 1709 SSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQ-KDSSKTAKGKDASHSPKGPLAPPES 1767
Query: 501 --------------------------PVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQ 534
P P + P +P P PP P L
Sbjct: 1768 KASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLES 1827
Query: 535 DVKPPFPPDIKPNMSALPPPP 555
KP P D + +PP P
Sbjct: 1828 PSKPLAPADEDELLPLIPPEP 1848
Score = 35.4 bits (80), Expect = 0.29
Identities = 36/144 (25%), Positives = 51/144 (35%), Gaps = 16/144 (11%)
Query: 918 PPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLH 977
PP ++ P P A+ P P + A S PS +G P P PP
Sbjct: 1550 PPAMTVPS--PKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG--APSPKELLIPPAV 1605
Query: 978 HSGAP----------PPPPSQPPRQP-PQAAPSSHPHSDLTFNPSSALEGQAGAQGASDM 1026
S +P PP P + P P P+ P+S P + + S + + +
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATV 1665
Query: 1027 PEPSLDLLPELTNPDELLSYLDPP 1050
P+ S LP P L L P
Sbjct: 1666 PQASKG-LPAKKGPTALKEVLVAP 1688
Score = 34.3 bits (77), Expect = 0.64
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 17/91 (18%)
Query: 917 GPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPL 976
G P P P AA L + T PH G+ P+P++ V PS + GP
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLA-TPPHKGA---PNPAV-----VTPPSPKGGPAT 1303
Query: 977 HH-SGAPPPPPSQPPRQ-------PPQAAPS 999
GAP PP + PP PP+ AP+
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGAPT 1334
Score = 32.3 bits (72), Expect = 2.4
Identities = 46/184 (25%), Positives = 61/184 (33%), Gaps = 19/184 (10%)
Query: 866 GPGPSPYP-LPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMND-FMHGPPQLSH 923
GP SP P PP T + S G P G P ++ G P L
Sbjct: 1300 GPATSPPKGAPTPPAATPPSPKGSPGTPP--------PKGAPTPPAVTPPSPKGTPTL-- 1349
Query: 924 PPDMPNNMAALEKPLSH----PMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHS 979
P P++ P S P T H G PS ++G +P P P
Sbjct: 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIP 1409
Query: 980 GAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQA--GAQGASDMPEPSLD-LLPE 1036
+P P+ P + A PS + P S + A +G P D LP
Sbjct: 1410 LSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPA 1469
Query: 1037 LTNP 1040
+T P
Sbjct: 1470 VTPP 1473
Score = 31.6 bits (70), Expect = 4.2
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 481 TFSGSSYSNYSQGNVNRPPRPVPVANYPHSPV--PGNPTPPMTPGSSIPPYLSPSQDVKP 538
T GS+ + GN++ P PV + P + + G+ P T S PP SP P
Sbjct: 810 TKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPP--SPKGAPTP 867
Query: 539 PFPPDIKPNMSALPPPPANHNDELRLTFP 567
+ P LPP + L FP
Sbjct: 868 SAVTPLSPKGVTLPPKETPTPSVVNLPFP 896
Score = 31.2 bits (69), Expect = 5.5
Identities = 48/198 (24%), Positives = 62/198 (31%), Gaps = 28/198 (14%)
Query: 863 AALGP-GPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQL 921
+AL P SP P G ++ S Y D P +P G S++ PP
Sbjct: 758 SALAPVASSPKECPTEDSGASATASSKGTLTYLA----DSP--SPLGVSVSPQTKRPPTK 811
Query: 922 --SHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSG------ 973
S PD P + L P+S +P S Q H P P S G
Sbjct: 812 KGSAGPDTP--IGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSA 869
Query: 974 -PPLHHSGAPPPPPSQP---------PRQ-PPQAAPSSHPHSDLTFNPSSALEGQAGAQG 1022
PL G PP P P++ P AP P +T + +G
Sbjct: 870 VTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKG 929
Query: 1023 ASDMPEPSLDLLPELTNP 1040
P P P P
Sbjct: 930 IPASPSPKGAPTPPAATP 947
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 69.3 bits (168), Expect = 2e-11
Identities = 118/473 (24%), Positives = 157/473 (33%), Gaps = 66/473 (13%)
Query: 113 KSRQSDP---PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTT 169
KSR +D KLP + P S S+K + S +D + + ++ PG LS V
Sbjct: 112 KSRTTDTFRSEQKLPGRSP--STISLKESKSRTD-------LKEEHKSSMMPGFLSEVNA 162
Query: 170 VWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGP 229
+ V++ + N NP + + S S Q Q++Q +
Sbjct: 163 LSAVSS----------VVNKFNPFD-----LISDSEASQEETTKKQKVVQKEQGKPEGII 207
Query: 230 AQPYIQQSMYGRPNYPGSGGFGASYPGGPNA------------PAGMGIP---PHTRPPA 274
P QQ P G G G P + P G G P P P
Sbjct: 208 KPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQT 267
Query: 275 DFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP 334
D + A+ A + +L I Q P P +QP
Sbjct: 268 DHAKLPLQRDASRPQTKQADIVR-GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQP 326
Query: 335 GP-RGPASMGGSMNPASMAAG-----MTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQ 388
GP + PA G P + G + P G + PP QP P P G P
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA---QPLGPAKPPAQQTGSEKPSS 383
Query: 389 TYPGPRPQSLPIQNIKRP--YPGEPNYGNQQYGPNSQFPTQPG-QYPAPNPPRPLTSPNY 445
PGP+ + P K P PG QQ G QPG Q PA P T
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 446 PGQ-RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPV 504
PG ++P+Q +G G P Q G + Q +PP P
Sbjct: 444 PGPGKIPAQ-QAGPGKTSAQQTGPTKPPSQL-------PGPAKPPPQQPGPAKPPPQQPG 495
Query: 505 ANYPHSPVPGN-PTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPA 556
+ P S PG+ PP PG + P P KPP SA P PA
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPG-STKPPSQQPGSAKPSAQQPSPA 547
Score = 64.7 bits (156), Expect = 4e-10
Identities = 102/440 (23%), Positives = 139/440 (31%), Gaps = 86/440 (19%)
Query: 135 MKPTLSHSDGSFPYDSVPWQQNTNQPP----GSLSVVTTVWGVTNTSQSQVLGNPMANAN 190
+KP L P +P QQ + P G+ +++ SQ G P+
Sbjct: 207 IKPPLQQQ----PPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPT 262
Query: 191 NPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGF 250
+ S P + + P++P IQQ G+P
Sbjct: 263 QTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPP------- 315
Query: 251 GASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQ 310
A PG + G PP P+ T+P A T A
Sbjct: 316 -AQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQ-------- 364
Query: 311 NKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPP-MGMNQ 369
P+GP + PA GS P+S G P ++ PP +G
Sbjct: 365 --------PLGPAKP-------------PAQQTGSEKPSSEQPG--PKALAQPPGVGKTP 401
Query: 370 PRPPGIS--PFGTHGQRMPQQTYPG-------PRPQSLPIQNIKRPYPGEPNYGNQQYGP 420
+ PG + P G P PG P P P+Q PG QQ GP
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ-----PGPGKIPAQQAGP 456
Query: 421 NSQFPTQ------PGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQ 474
Q P Q P P P P PG P G PP+ G P Q
Sbjct: 457 GKTSAQQTGPTKPPSQLPGPAKP----PPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 475 FNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQ 534
G + + Q +PP P + P + P +P P S+ P +S +
Sbjct: 513 -------QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP-SPAKPSAQQSTKP--VSQTG 562
Query: 535 DVKPPFPPDIKPNMSALPPP 554
KP PP + P SA PP
Sbjct: 563 SGKPLQPPTVSP--SAKQPP 580
Score = 60.1 bits (144), Expect = 1e-08
Identities = 117/508 (23%), Positives = 163/508 (32%), Gaps = 110/508 (21%)
Query: 113 KSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWG 172
KS S P K+ QPP + PT + + +P Q++ ++P
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQGPTQTPQTD---HAKLPLQRDASRP------------ 281
Query: 173 VTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQP 232
T Q+ ++ + P +P + PG Q G ++ ++ GPA+P
Sbjct: 282 --QTKQADIVRGESVKPSLP-----SPSKPPIQQPTPGKPPAQQPGHEK---SQPGPAKP 331
Query: 233 YIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAA 292
Q S +P A PG P P T+PPA QP A A +
Sbjct: 332 PAQPSGLTKPL--------AQQPGTVKPPVQP--PGTTKPPA---QPLGPAKPPAQQTGS 378
Query: 293 ATATATATATVAALQE--TQNKDINQYGPMGP-TQAYNSQ--FMNQPGPRGPASMGG-SM 346
++ A Q Q GP P TQ + QPG + PA G +
Sbjct: 379 EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 347 NPASMAA-GMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGP-RPQSLPIQNIK 404
P G P+ +GP Q P P G P PGP +P + K
Sbjct: 439 TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAK 498
Query: 405 RP--YPGEPNYGNQQYGPNSQFPTQPGQYPAPN-------PPRPLTSPNYPGQRMPSQP- 454
P PG QQ GP P QPG P+ P SP P + ++P
Sbjct: 499 PPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV 558
Query: 455 ----SSGQYPPPTVNMGQYYKPEQF--------------------NGQNNTFSGSSYSNY 490
S PPTV+ P Q NT + +
Sbjct: 559 SQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVC 618
Query: 491 SQGNVNRPPRPVPVANY------------------PHSPVPGNPTPPMTPGSSI------ 526
S N P V + P SP P T P+T S++
Sbjct: 619 SLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQ 678
Query: 527 PPYLSPSQDVKPPFPPDIKPNMSALPPP 554
P SP +D P K ++S P P
Sbjct: 679 PQQTSPKKDAAP------KQDLSKAPEP 700
Score = 40.8 bits (94), Expect = 0.007
Identities = 41/152 (26%), Positives = 50/152 (32%), Gaps = 9/152 (5%)
Query: 864 ALGPGPSPYPLPPP-PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLS 922
A PGP+ P+ P PG + + Q G P PG PPQ
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP------PPQQP 484
Query: 923 HPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSG--PPLHHSG 980
P P KP S T P PS QQ PS Q G P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 981 APPPPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
+P P +Q +P S P T +PS+
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSA 576
Score = 38.5 bits (88), Expect = 0.034
Identities = 43/149 (28%), Positives = 52/149 (34%), Gaps = 16/149 (10%)
Query: 918 PPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHP-SIQQGLHVPH-PSSQSGP- 974
PP + PP P P P Q+T SS+QP P ++ Q V P+ Q GP
Sbjct: 355 PPGTTKPPAQPLG------PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 975 --PLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAG-----AQGASDMP 1027
P G P P QP Q P AP P QAG AQ
Sbjct: 409 KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 1028 EPSLDLLPELTNPDELLSYLDPPDLPSNS 1056
PS P P + PP P ++
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Score = 35.4 bits (80), Expect = 0.29
Identities = 70/317 (22%), Positives = 104/317 (32%), Gaps = 46/317 (14%)
Query: 282 AAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGP-- 339
AAAAAA A+ + + TA A ++ D++Q Q Q P+G
Sbjct: 17 AAAAAAGGGASGAGSPSHTAIPAGMEA----DLSQLSEEERRQIAAVMSRAQGLPKGSVP 72
Query: 340 --ASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQS 397
A+ SM+ P SG P +P PG+S T +Q PG P +
Sbjct: 73 PAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPST 132
Query: 398 LPIQNIK-RPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNP--PRPLTSPNYPGQRMPS-- 452
+ ++ K R E + + G S+ N P L S + Q +
Sbjct: 133 ISLKESKSRTDLKEEHKSSMMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKK 192
Query: 453 ---------------QPSSGQYPPPTV--NMGQYYKPEQFNGQNNTFSGSSYSNYSQ--- 492
+P Q PP + G P Q +G + S
Sbjct: 193 QKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPP 252
Query: 493 --GNVNRPPRPVPVANYPHSPVPGNPTPPMTP------GSSIPPYL-----SPSQDVKPP 539
G + P P ++ P+ + + P T G S+ P L P Q P
Sbjct: 253 GTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG 312
Query: 540 FPPDIKPNMSALPPPPA 556
PP +P P PA
Sbjct: 313 KPPAQQPGHEKSQPGPA 329
Score = 35.4 bits (80), Expect = 0.29
Identities = 82/409 (20%), Positives = 127/409 (31%), Gaps = 61/409 (14%)
Query: 171 WGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQ--------FAGQQQQ 222
W N + LG +A + P A TTS +SPQ A +Q
Sbjct: 635 WLCLNCQMKRALGGDLAPVPSSPQPKLKT-APVTTTSAVSKSSPQPQQTSPKKDAAPKQD 693
Query: 223 FSAKAGPAQP---YIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHT-RPPADFTQ 278
S P +P Q +++G P+ A P P +P + P +
Sbjct: 694 LSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDK 753
Query: 279 PAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPR- 337
P ++++AT + + + + P+ A SQ G +
Sbjct: 754 PKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKV 813
Query: 338 GPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQS 397
P PAS + ++ G S G Q + P + QT P+P +
Sbjct: 814 SPFDSKAIPRPASDSKIISHPGPSSESKGQKQ-----VDPVQKKEEPKKAQTKMSPKPDA 868
Query: 398 LPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSG 457
P+ P P P PRP P + +P
Sbjct: 869 KPM---------------------------PKGSPTPPGPRPTAGQTVPTPQQSPKPQE- 900
Query: 458 QYPPPTVNMGQY---------YKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVA-NY 507
Q ++N+G E G+ F S +S S ++ +P P + +
Sbjct: 901 QSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS-NLISTAGQPGPHSQSG 959
Query: 508 PHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPA 556
P +P+ P P P S PP S PP P P P A
Sbjct: 960 PGAPMKQAPAPSQPPTSQGPP---KSTGQAPPAPAKSIPVKKETKAPAA 1005
Score = 34.3 bits (77), Expect = 0.64
Identities = 40/176 (22%), Positives = 56/176 (31%), Gaps = 21/176 (11%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPD 926
P P P PP + +Q Q P PG T P Q P
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPLAQQPGLQS------PAKAPGPTKT------PVQQPGPGK 448
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPP 986
+P A P Q+T P S P P+ P + PP G+ PP
Sbjct: 449 IPAQQAG---PGKTSAQQTGPTKPPSQLPGPAKPP----PQQPGPAKPPPQQPGSAKPPS 501
Query: 987 SQP--PRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNP 1040
QP + PPQ + P + + A+ ++ P P+ + T P
Sbjct: 502 QQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKP 557
Score = 33.5 bits (75), Expect = 1.1
Identities = 46/198 (23%), Positives = 65/198 (32%), Gaps = 14/198 (7%)
Query: 255 PGGPNAPAGMGIPPHTRPPADFTQPAAAAA------AAAVAAAAATATATATATVAALQE 308
P P G PP RP A T P + + + + T + QE
Sbjct: 866 PDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQE 925
Query: 309 TQNKDINQYGPMGPTQAYN-SQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGM 367
T + +G +QA N QPGP + G M A A P GPP
Sbjct: 926 TVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQA--PAPSQPPTSQGPPKST 983
Query: 368 NQ-PRPPGISPFGTHGQRMPQQTYPGPRPQSLP----IQNIKRPYPGEPNYGNQQYGPNS 422
Q P P S + P P+ + P + K+P P + + +
Sbjct: 984 GQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKA 1043
Query: 423 QFPTQPGQYPAPNPPRPL 440
PT+ + P P PL
Sbjct: 1044 VLPTKLEKSPKPESTCPL 1061
Score = 32.7 bits (73), Expect = 1.9
Identities = 31/125 (24%), Positives = 40/125 (32%), Gaps = 26/125 (20%)
Query: 902 PHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQP------ 955
P G + GP L+ PP + A P P Q+ + QP
Sbjct: 372 PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPA 431
Query: 956 ------HPSIQQGLHVPHPSSQSG-------------PPLHHSGAPPPPPSQP-PRQPPQ 995
+QQ P+ Q+G PP G PPP QP P +PP
Sbjct: 432 KAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP 491
Query: 996 AAPSS 1000
P S
Sbjct: 492 QQPGS 496
Score = 32.7 bits (73), Expect = 1.9
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 498 PPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPAN 557
P +P P + P PP P PP P PP PP P + LP
Sbjct: 2387 PAKPRPFFRSSSLDISAQPPPPPPPPPPPPP--PPPPPPPPPLPPPTSPKPTILPKKKLT 2444
Query: 558 HNDELRLTFPVRDGV 572
+ P+ D V
Sbjct: 2445 VASPVTTATPLFDAV 2459
Score = 32.0 bits (71), Expect = 3.2
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 966 PHPSSQSGP--PLHHSGAPPPPPSQ--PPRQPPQAAPS 999
P P SQSGP P+ + AP PP+ PP+ QA P+
Sbjct: 952 PGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPA 989
Score = 32.0 bits (71), Expect = 3.2
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 469 YYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRP------VPVANYPHSPVPGNPTPPMTP 522
Y+ + GQ S + S ++ PRP + ++ P P P P PP P
Sbjct: 2360 YFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPP 2419
Query: 523 GSSIPPYLSPSQDVKPPFPPDIK 545
PP L P KP P K
Sbjct: 2420 PPPPPPPLPPPTSPKPTILPKKK 2442
Score = 32.0 bits (71), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 974 PPLHHSGAPPPPPSQPPRQPPQAAPSSHP 1002
PP PPPPP PP PP P + P
Sbjct: 2405 PPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2433
Score = 31.6 bits (70), Expect = 4.2
Identities = 46/201 (22%), Positives = 64/201 (31%), Gaps = 26/201 (12%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQ--LSH 923
GPG P P +S + G G P P T D P Q S
Sbjct: 224 GPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGK---PIQGPTQTPQTDHAKLPLQRDASR 280
Query: 924 PPDMPNNMA-------ALEKPLSHPMQETMPHAGSSDQP-HPSIQQGLHVP--HPSSQSG 973
P ++ +L P P+Q+ P + QP H Q G P PS +
Sbjct: 281 PQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTK 340
Query: 974 PPLHHSGAPPP---------PPSQP--PRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQG 1022
P G P PP+QP P +PP S S P + + +
Sbjct: 341 PLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT 400
Query: 1023 ASDMPEPSLDLLPELTNPDEL 1043
+ P P+ ++ P L
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPL 421
Score = 31.6 bits (70), Expect = 4.2
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 969 SSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHS 1004
S+Q PP PPPPP PP PP P P S
Sbjct: 2402 SAQPPPP-----PPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 31.6 bits (70), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 497 RPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFP 541
+PP P P P P P P PP+ P +S P + P + + P
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP 2448
Score = 31.2 bits (69), Expect = 5.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 957 PSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHP 1002
PS+ P P +S + PPPPP PP PP P P
Sbjct: 2381 PSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPP 2426
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 69.3 bits (168), Expect = 2e-11
Identities = 118/473 (24%), Positives = 157/473 (33%), Gaps = 66/473 (13%)
Query: 113 KSRQSDP---PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTT 169
KSR +D KLP + P S S+K + S +D + + ++ PG LS V
Sbjct: 112 KSRTTDTFRSEQKLPGRSP--STISLKESKSRTD-------LKEEHKSSMMPGFLSEVNA 162
Query: 170 VWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGP 229
+ V++ + N NP + + S S Q Q++Q +
Sbjct: 163 LSAVSS----------VVNKFNPFD-----LISDSEASQEETTKKQKVVQKEQGKPEGII 207
Query: 230 AQPYIQQSMYGRPNYPGSGGFGASYPGGPNA------------PAGMGIP---PHTRPPA 274
P QQ P G G G P + P G G P P P
Sbjct: 208 KPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQT 267
Query: 275 DFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP 334
D + A+ A + +L I Q P P +QP
Sbjct: 268 DHAKLPLQRDASRPQTKQADIVR-GESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQP 326
Query: 335 GP-RGPASMGGSMNPASMAAG-----MTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQ 388
GP + PA G P + G + P G + PP QP P P G P
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPA---QPLGPAKPPAQQTGSEKPSS 383
Query: 389 TYPGPRPQSLPIQNIKRP--YPGEPNYGNQQYGPNSQFPTQPG-QYPAPNPPRPLTSPNY 445
PGP+ + P K P PG QQ G QPG Q PA P T
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 446 PGQ-RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPV 504
PG ++P+Q +G G P Q G + Q +PP P
Sbjct: 444 PGPGKIPAQ-QAGPGKTSAQQTGPTKPPSQL-------PGPAKPPPQQPGPAKPPPQQPG 495
Query: 505 ANYPHSPVPGN-PTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPA 556
+ P S PG+ PP PG + P P KPP SA P PA
Sbjct: 496 SAKPPSQQPGSTKPPPQQPGPAKPSPQQPG-STKPPSQQPGSAKPSAQQPSPA 547
Score = 64.7 bits (156), Expect = 4e-10
Identities = 102/440 (23%), Positives = 139/440 (31%), Gaps = 86/440 (19%)
Query: 135 MKPTLSHSDGSFPYDSVPWQQNTNQPP----GSLSVVTTVWGVTNTSQSQVLGNPMANAN 190
+KP L P +P QQ + P G+ +++ SQ G P+
Sbjct: 207 IKPPLQQQ----PPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPT 262
Query: 191 NPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGF 250
+ S P + + P++P IQQ G+P
Sbjct: 263 QTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPP------- 315
Query: 251 GASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQ 310
A PG + G PP P+ T+P A T A
Sbjct: 316 -AQQPGHEKSQPGPAKPP--AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQ-------- 364
Query: 311 NKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPP-MGMNQ 369
P+GP + PA GS P+S G P ++ PP +G
Sbjct: 365 --------PLGPAKP-------------PAQQTGSEKPSSEQPG--PKALAQPPGVGKTP 401
Query: 370 PRPPGIS--PFGTHGQRMPQQTYPG-------PRPQSLPIQNIKRPYPGEPNYGNQQYGP 420
+ PG + P G P PG P P P+Q PG QQ GP
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ-----PGPGKIPAQQAGP 456
Query: 421 NSQFPTQ------PGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQ 474
Q P Q P P P P PG P G PP+ G P Q
Sbjct: 457 GKTSAQQTGPTKPPSQLPGPAKP----PPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 475 FNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQ 534
G + + Q +PP P + P + P +P P S+ P +S +
Sbjct: 513 -------QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP-SPAKPSAQQSTKP--VSQTG 562
Query: 535 DVKPPFPPDIKPNMSALPPP 554
KP PP + P SA PP
Sbjct: 563 SGKPLQPPTVSP--SAKQPP 580
Score = 60.1 bits (144), Expect = 1e-08
Identities = 117/508 (23%), Positives = 163/508 (32%), Gaps = 110/508 (21%)
Query: 113 KSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWG 172
KS S P K+ QPP + PT + + +P Q++ ++P
Sbjct: 237 KSISSQQPEKIKSQPPGTGKPIQGPTQTPQTD---HAKLPLQRDASRP------------ 281
Query: 173 VTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQP 232
T Q+ ++ + P +P + PG Q G ++ ++ GPA+P
Sbjct: 282 --QTKQADIVRGESVKPSLP-----SPSKPPIQQPTPGKPPAQQPGHEK---SQPGPAKP 331
Query: 233 YIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAA 292
Q S +P A PG P P T+PPA QP A A +
Sbjct: 332 PAQPSGLTKPL--------AQQPGTVKPPVQP--PGTTKPPA---QPLGPAKPPAQQTGS 378
Query: 293 ATATATATATVAALQE--TQNKDINQYGPMGP-TQAYNSQ--FMNQPGPRGPASMGG-SM 346
++ A Q Q GP P TQ + QPG + PA G +
Sbjct: 379 EKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTK 438
Query: 347 NPASMAA-GMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGP-RPQSLPIQNIK 404
P G P+ +GP Q P P G P PGP +P + K
Sbjct: 439 TPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAK 498
Query: 405 RP--YPGEPNYGNQQYGPNSQFPTQPGQYPAPN-------PPRPLTSPNYPGQRMPSQP- 454
P PG QQ GP P QPG P+ P SP P + ++P
Sbjct: 499 PPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPV 558
Query: 455 ----SSGQYPPPTVNMGQYYKPEQF--------------------NGQNNTFSGSSYSNY 490
S PPTV+ P Q NT + +
Sbjct: 559 SQTGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVC 618
Query: 491 SQGNVNRPPRPVPVANY------------------PHSPVPGNPTPPMTPGSSI------ 526
S N P V + P SP P T P+T S++
Sbjct: 619 SLCGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQ 678
Query: 527 PPYLSPSQDVKPPFPPDIKPNMSALPPP 554
P SP +D P K ++S P P
Sbjct: 679 PQQTSPKKDAAP------KQDLSKAPEP 700
Score = 40.8 bits (94), Expect = 0.007
Identities = 41/152 (26%), Positives = 50/152 (32%), Gaps = 9/152 (5%)
Query: 864 ALGPGPSPYPLPPP-PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLS 922
A PGP+ P+ P PG + + Q G P PG PPQ
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKP------PPQQP 484
Query: 923 HPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSG--PPLHHSG 980
P P KP S T P PS QQ PS Q G P
Sbjct: 485 GPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 981 APPPPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
+P P +Q +P S P T +PS+
Sbjct: 545 SPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSA 576
Score = 38.5 bits (88), Expect = 0.034
Identities = 43/149 (28%), Positives = 52/149 (34%), Gaps = 16/149 (10%)
Query: 918 PPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHP-SIQQGLHVPH-PSSQSGP- 974
PP + PP P P P Q+T SS+QP P ++ Q V P+ Q GP
Sbjct: 355 PPGTTKPPAQPLG------PAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA 408
Query: 975 --PLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAG-----AQGASDMP 1027
P G P P QP Q P AP P QAG AQ
Sbjct: 409 KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTK 468
Query: 1028 EPSLDLLPELTNPDELLSYLDPPDLPSNS 1056
PS P P + PP P ++
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Score = 35.4 bits (80), Expect = 0.29
Identities = 70/317 (22%), Positives = 104/317 (32%), Gaps = 46/317 (14%)
Query: 282 AAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGP-- 339
AAAAAA A+ + + TA A ++ D++Q Q Q P+G
Sbjct: 17 AAAAAAGGGASGAGSPSHTAIPAGMEA----DLSQLSEEERRQIAAVMSRAQGLPKGSVP 72
Query: 340 --ASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQS 397
A+ SM+ P SG P +P PG+S T +Q PG P +
Sbjct: 73 PAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPST 132
Query: 398 LPIQNIK-RPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNP--PRPLTSPNYPGQRMPS-- 452
+ ++ K R E + + G S+ N P L S + Q +
Sbjct: 133 ISLKESKSRTDLKEEHKSSMMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKK 192
Query: 453 ---------------QPSSGQYPPPTV--NMGQYYKPEQFNGQNNTFSGSSYSNYSQ--- 492
+P Q PP + G P Q +G + S
Sbjct: 193 QKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPP 252
Query: 493 --GNVNRPPRPVPVANYPHSPVPGNPTPPMTP------GSSIPPYL-----SPSQDVKPP 539
G + P P ++ P+ + + P T G S+ P L P Q P
Sbjct: 253 GTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPG 312
Query: 540 FPPDIKPNMSALPPPPA 556
PP +P P PA
Sbjct: 313 KPPAQQPGHEKSQPGPA 329
Score = 35.4 bits (80), Expect = 0.29
Identities = 82/409 (20%), Positives = 127/409 (31%), Gaps = 61/409 (14%)
Query: 171 WGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQ--------FAGQQQQ 222
W N + LG +A + P A TTS +SPQ A +Q
Sbjct: 635 WLCLNCQMKRALGGDLAPVPSSPQPKLKT-APVTTTSAVSKSSPQPQQTSPKKDAAPKQD 693
Query: 223 FSAKAGPAQP---YIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHT-RPPADFTQ 278
S P +P Q +++G P+ A P P +P + P +
Sbjct: 694 LSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDK 753
Query: 279 PAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPR- 337
P ++++AT + + + + P+ A SQ G +
Sbjct: 754 PKQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKV 813
Query: 338 GPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQS 397
P PAS + ++ G S G Q + P + QT P+P +
Sbjct: 814 SPFDSKAIPRPASDSKIISHPGPSSESKGQKQ-----VDPVQKKEEPKKAQTKMSPKPDA 868
Query: 398 LPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSG 457
P+ P P P PRP P + +P
Sbjct: 869 KPM---------------------------PKGSPTPPGPRPTAGQTVPTPQQSPKPQE- 900
Query: 458 QYPPPTVNMGQY---------YKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVA-NY 507
Q ++N+G E G+ F S +S S ++ +P P + +
Sbjct: 901 QSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS-NLISTAGQPGPHSQSG 959
Query: 508 PHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPA 556
P +P+ P P P S PP S PP P P P A
Sbjct: 960 PGAPMKQAPAPSQPPTSQGPP---KSTGQAPPAPAKSIPVKKETKAPAA 1005
Score = 34.3 bits (77), Expect = 0.64
Identities = 40/176 (22%), Positives = 56/176 (31%), Gaps = 21/176 (11%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPD 926
P P P PP + +Q Q P PG T P Q P
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPLAQQPGLQS------PAKAPGPTKT------PVQQPGPGK 448
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPP 986
+P A P Q+T P S P P+ P + PP G+ PP
Sbjct: 449 IPAQQAG---PGKTSAQQTGPTKPPSQLPGPAKPP----PQQPGPAKPPPQQPGSAKPPS 501
Query: 987 SQP--PRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNP 1040
QP + PPQ + P + + A+ ++ P P+ + T P
Sbjct: 502 QQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKP 557
Score = 33.5 bits (75), Expect = 1.1
Identities = 46/198 (23%), Positives = 65/198 (32%), Gaps = 14/198 (7%)
Query: 255 PGGPNAPAGMGIPPHTRPPADFTQPAAAAA------AAAVAAAAATATATATATVAALQE 308
P P G PP RP A T P + + + + T + QE
Sbjct: 866 PDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQE 925
Query: 309 TQNKDINQYGPMGPTQAYN-SQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGM 367
T + +G +QA N QPGP + G M A A P GPP
Sbjct: 926 TVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQA--PAPSQPPTSQGPPKST 983
Query: 368 NQ-PRPPGISPFGTHGQRMPQQTYPGPRPQSLP----IQNIKRPYPGEPNYGNQQYGPNS 422
Q P P S + P P+ + P + K+P P + + +
Sbjct: 984 GQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKA 1043
Query: 423 QFPTQPGQYPAPNPPRPL 440
PT+ + P P PL
Sbjct: 1044 VLPTKLEKSPKPESTCPL 1061
Score = 32.7 bits (73), Expect = 1.9
Identities = 31/125 (24%), Positives = 40/125 (32%), Gaps = 26/125 (20%)
Query: 902 PHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQP------ 955
P G + GP L+ PP + A P P Q+ + QP
Sbjct: 372 PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPA 431
Query: 956 ------HPSIQQGLHVPHPSSQSG-------------PPLHHSGAPPPPPSQP-PRQPPQ 995
+QQ P+ Q+G PP G PPP QP P +PP
Sbjct: 432 KAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP 491
Query: 996 AAPSS 1000
P S
Sbjct: 492 QQPGS 496
Score = 32.7 bits (73), Expect = 1.9
Identities = 20/75 (26%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 498 PPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPAN 557
P +P P + P PP P PP P PP PP P + LP
Sbjct: 2387 PAKPRPFFRSSSLDISAQPPPPPPPPPPPPP--PPPPPPPPPLPPPTSPKPTILPKKKLT 2444
Query: 558 HNDELRLTFPVRDGV 572
+ P+ D V
Sbjct: 2445 VASPVTTATPLFDAV 2459
Score = 32.0 bits (71), Expect = 3.2
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 966 PHPSSQSGP--PLHHSGAPPPPPSQ--PPRQPPQAAPS 999
P P SQSGP P+ + AP PP+ PP+ QA P+
Sbjct: 952 PGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPA 989
Score = 32.0 bits (71), Expect = 3.2
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 469 YYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRP------VPVANYPHSPVPGNPTPPMTP 522
Y+ + GQ S + S ++ PRP + ++ P P P P PP P
Sbjct: 2360 YFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPP 2419
Query: 523 GSSIPPYLSPSQDVKPPFPPDIK 545
PP L P KP P K
Sbjct: 2420 PPPPPPPLPPPTSPKPTILPKKK 2442
Score = 32.0 bits (71), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 974 PPLHHSGAPPPPPSQPPRQPPQAAPSSHP 1002
PP PPPPP PP PP P + P
Sbjct: 2405 PPPPPPPPPPPPPPPPPPPPPPLPPPTSP 2433
Score = 31.6 bits (70), Expect = 4.2
Identities = 46/201 (22%), Positives = 64/201 (31%), Gaps = 26/201 (12%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQ--LSH 923
GPG P P +S + G G P P T D P Q S
Sbjct: 224 GPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGK---PIQGPTQTPQTDHAKLPLQRDASR 280
Query: 924 PPDMPNNMA-------ALEKPLSHPMQETMPHAGSSDQP-HPSIQQGLHVP--HPSSQSG 973
P ++ +L P P+Q+ P + QP H Q G P PS +
Sbjct: 281 PQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTK 340
Query: 974 PPLHHSGAPPP---------PPSQP--PRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQG 1022
P G P PP+QP P +PP S S P + + +
Sbjct: 341 PLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKT 400
Query: 1023 ASDMPEPSLDLLPELTNPDEL 1043
+ P P+ ++ P L
Sbjct: 401 PAQQPGPAKPPTQQVGTPKPL 421
Score = 31.6 bits (70), Expect = 4.2
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 969 SSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHS 1004
S+Q PP PPPPP PP PP P P S
Sbjct: 2402 SAQPPPP-----PPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 31.6 bits (70), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 497 RPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFP 541
+PP P P P P P P PP+ P +S P + P + + P
Sbjct: 2404 QPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASP 2448
Score = 31.2 bits (69), Expect = 5.5
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 957 PSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHP 1002
PS+ P P +S + PPPPP PP PP P P
Sbjct: 2381 PSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPP 2426
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 68.9 bits (167), Expect = 2e-11
Identities = 78/336 (23%), Positives = 105/336 (31%), Gaps = 53/336 (15%)
Query: 250 FGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQET 309
+ AS P P P PP PP P + +A +A +A +T+ LQ
Sbjct: 619 YTASQPSPPLPPPPPPPPPPPPPPPP--PPPPLPSQSAPSAGSAAPMFVKYSTITRLQNA 676
Query: 310 QNKDINQYGPMGP----TQAYNSQFMNQPG-----------PRGPASMGGSMNPASMAAG 354
+ P P +Q+ Q + P P P S + PA A
Sbjct: 677 SQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPS 736
Query: 355 MTPSGMSGPPMGMNQ-------------PRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQ 401
+ PP+ ++Q P PP +P P T P P
Sbjct: 737 LPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAP 796
Query: 402 NIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPP 461
+ + P P P + P P Y P+PP P P +P Q S PP
Sbjct: 797 VVTQAAPPTPT---PPVPPAKKQPAFPASYIPPSPPTPPVP--VPPPTLPKQQSFCAKPP 851
Query: 462 PTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMT 521
P+ +Q Q PP P + + P PVP N P
Sbjct: 852 PSPLSPVPSVVKQIASQ----------------FPPPPTPPAMESQPLKPVPANVAPQSP 895
Query: 522 PGSSIPPYLSPSQ--DVKPPFPPDIKPNMSALPPPP 555
P P PS P FPP + PPPP
Sbjct: 896 PAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPP 931
Score = 56.6 bits (135), Expect = 1e-07
Identities = 117/478 (24%), Positives = 162/478 (33%), Gaps = 80/478 (16%)
Query: 119 PPGKLPMQPPLSSMSSMKPTLSHSDGSF-PYDSVPWQQNTNQPPGSLSVVTTVWGVTNTS 177
PP P PPL S S+ P+ + F Y ++ QN +Q G+L T + + S
Sbjct: 639 PPPPPPPPPPLPSQSA--PSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQS 696
Query: 178 -QSQVLGNPMANANNPMNPGGNPM-ASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPY-I 234
+ Q+L P P P P S M P +P QFSA P + + +
Sbjct: 697 VKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLP----QFSAPPPPLKIHQV 752
Query: 235 QQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAAT 294
Q P P P P PA + PP P T PA +
Sbjct: 753 QHITQVAPPTP---------PPPPPIPAPL--PPQAPPKPLVTIPAPTSTKTVAPVVTQA 801
Query: 295 ATATATATVAALQETQNKDINQYGPMGPTQAY---------NSQFMNQP--GPRGPASMG 343
A T T V ++ + P PT F +P P P
Sbjct: 802 APPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSV 861
Query: 344 GSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQ-QTYPGPRPQSLPIQN 402
+ TP M P+ +P P ++P Q P + P +P S+P+ +
Sbjct: 862 VKQIASQFPPPPTPPAMESQPL---KPVPANVAP-----QSPPAVKAKPKWQPSSIPVPS 913
Query: 403 IKRPYPGEPNYGNQQYGPNSQF---PTQPGQYPAPNPPRPLTSPNYPGQ-----RMPSQP 454
P P P S P P PAP PP P T+ P + + S+
Sbjct: 914 PDFPPPP----------PESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKT 963
Query: 455 SS--GQYPPPTVNMGQYYK-------PEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVA 505
SS G+ PPPT K PE ++ G+ ++ P P A
Sbjct: 964 SSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAA 1023
Query: 506 NYPHSPVPGNPTPPMTPG-------SSIPPYLS-PSQDVKPPFPPDIKPNMSALPPPP 555
P P N + PG S+ P LS +D FP P+ S PPPP
Sbjct: 1024 --PPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGRGKDSVVEFPS--PPSDSDFPPPP 1077
Score = 46.6 bits (109), Expect = 1e-04
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 23/156 (14%)
Query: 918 PPQLSHPPDMPNNMAA-LEKPLSHPMQETMP----HAGSSDQPHPSIQ-----QGLHVPH 967
P LS P + +A+ P + P E+ P A + Q P+++ Q +P
Sbjct: 852 PSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPV 911
Query: 968 PSSQSGPPLHHSGA--PPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASD 1025
PS PP S PPPPPS P PP P++ P D + +P + G
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKP 971
Query: 1026 MPEPSLDLL-----------PELTNPDELLSYLDPP 1050
P P + P+ + D L+S PP
Sbjct: 972 PPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPP 1007
Score = 45.4 bits (106), Expect = 3e-04
Identities = 41/139 (29%), Positives = 52/139 (37%), Gaps = 12/139 (8%)
Query: 420 PNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQN 479
P+ P P P P PP P P P Q S PS+G P V + + + +
Sbjct: 624 PSPPLPPPPPPPPPPPPPPPPPPPPLPSQ---SAPSAGSAAPMFVKYSTITRLQNASQHS 680
Query: 480 NTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPP 539
Q +P VP P P P PP TPGS++ L P+ P
Sbjct: 681 GALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPP--PPPPPTPGSAMAQ-LKPA-----P 732
Query: 540 FPPDIKPNMSALPPPPANH 558
P + P SA PPP H
Sbjct: 733 CAPSL-PQFSAPPPPLKIH 750
Score = 44.3 bits (103), Expect = 6e-04
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Query: 939 SHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPP---- 994
S E+M +S P S Q + P+ +SQ PPL PPPPP PP PP
Sbjct: 591 SKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLP 650
Query: 995 -QAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP-------SLDLLPELTNPDELLSY 1046
Q+APS+ + + S+ Q +Q + + +P S + P++ P +
Sbjct: 651 SQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVP 710
Query: 1047 LDPPDLP 1053
PP P
Sbjct: 711 PPPPPPP 717
Score = 44.3 bits (103), Expect = 6e-04
Identities = 59/213 (27%), Positives = 73/213 (34%), Gaps = 42/213 (19%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQG----------------NNYQGHGNFDFPHGNPGGTS 910
P P P P PPPP S S G N Q G P P S
Sbjct: 635 PPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQS 694
Query: 911 MN---------DFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQ 961
+ + + PP PP P + A KP P ++P S+ P I Q
Sbjct: 695 QSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPA--PCAPSLPQF-SAPPPPLKIHQ 751
Query: 962 GLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQ 1021
H+ +Q PP PPPPP P PPQA P P + S+ Q
Sbjct: 752 VQHI----TQVAPP-----TPPPPPPIPAPLPPQAPPK--PLVTIPAPTSTKTVAPVVTQ 800
Query: 1022 GASDMPEPSLDLLPELTNPDELLSYLDPPDLPS 1054
A P P + P P SY+ PP P+
Sbjct: 801 AAPPTPTPPVP--PAKKQPAFPASYI-PPSPPT 830
Score = 43.1 bits (100), Expect = 0.001
Identities = 48/201 (23%), Positives = 68/201 (33%), Gaps = 32/201 (15%)
Query: 382 GQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLT 441
G ++ + + + P ++ P +P P P P P PP P
Sbjct: 584 GTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPP-- 641
Query: 442 SPNYPGQRMPSQ--PSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPP 499
P P +PSQ PS+G P V + + + + Q +P
Sbjct: 642 -PPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQ 700
Query: 500 RPVPVANYPHSPVPGNPTPPMTPGS------------SIPPYLSPSQDVK---------- 537
VP P P P PP TPGS S+P + +P +K
Sbjct: 701 ILVPPNGVVPPPPP--PPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQV 758
Query: 538 -PPFPPDIKPNMSALPP--PP 555
PP PP P + LPP PP
Sbjct: 759 APPTPPPPPPIPAPLPPQAPP 779
Score = 39.3 bits (90), Expect = 0.020
Identities = 54/205 (26%), Positives = 71/205 (34%), Gaps = 36/205 (17%)
Query: 845 FKTMSP----SQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFD 900
FK +P SQ + P ++ + P P P P PP PG + F
Sbjct: 684 FKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQ--LKPAPCAPSLPQFS 741
Query: 901 FPHGNPGGTSMNDFMH----GPPQLSHPPDMPNNMA--ALEKPLSHPMQETMPHAGSSDQ 954
P P ++ H PP PP +P + A KPL T+P S+
Sbjct: 742 AP---PPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLV-----TIPAPTSTKT 793
Query: 955 PHPSIQQGLHV----PHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSH------PHS 1004
P + Q P P ++ P S PP PP+ P PP P P S
Sbjct: 794 VAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPS 853
Query: 1005 DLTFNPSSALEGQAGAQGASDMPEP 1029
L+ PS Q AS P P
Sbjct: 854 PLSPVPSVV------KQIASQFPPP 872
Score = 35.0 bits (79), Expect = 0.38
Identities = 47/190 (24%), Positives = 64/190 (33%), Gaps = 39/190 (20%)
Query: 840 IPSKRFKTMSP-SQMIMPNVMEMIAALGPGPSPYPL-PPPPGGTNSNDYSSQGNNYQGHG 897
+PS F P S ++ P P PSP P PPPP T S G+ +
Sbjct: 911 VPSPDFPPPPPESSLVFPP---------PPPSPVPAPPPPPPPTASPTPDKSGSPGKKTS 961
Query: 898 NFDFPHGN--PGGTSMNDFMHGPPQLSHP-PDMPNNMAALEK-----PLSHPMQETMPHA 949
P G P N + HP P P+ + + K P +ET+P
Sbjct: 962 KTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPP 1021
Query: 950 GSSDQPHPSIQQGLHVPHPSSQ----------SG----------PPLHHSGAPPPPPSQP 989
+ +P G+++P Q SG P S PPPPP
Sbjct: 1022 AAPPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGRGKDSVVEFPSPPSDSDFPPPPPETE 1081
Query: 990 PRQPPQAAPS 999
PP P+
Sbjct: 1082 LPLPPIEIPA 1091
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 67.0 bits (162), Expect = 9e-11
Identities = 63/228 (27%), Positives = 84/228 (36%), Gaps = 32/228 (14%)
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
PAS+G + PA+ P P N P PP + + Q P GP +S
Sbjct: 326 PASVGSTSGPATTPLASAPR----PAAPANNPPPPSLM---STTQSRPPWMNSGPS-ESR 377
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSG- 457
P + PG P G P +P P P +P Q P+ P
Sbjct: 378 PYHGMHGGGPGGPGGG-------------PHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW 424
Query: 458 -QYPPPTVNMG-----QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSP 511
Q PPP +N G + P +T GS QG PP P+ + P P
Sbjct: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP 484
Query: 512 VPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHN 559
G P PP P +PP+ Q +PP PP +M++ P P N
Sbjct: 485 PSGQPPPP--PSGPLPPW--QQQQQQPPPPPPPSSSMASSTPLPWQQN 528
Score = 57.4 bits (137), Expect = 7e-08
Identities = 74/286 (25%), Positives = 101/286 (35%), Gaps = 28/286 (9%)
Query: 273 PADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMN 332
PA + A +A A A + + TQ++ + GP+++ M+
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRP--PWMNSGPSESRPYHGMH 383
Query: 333 QPGPRGPASMGGSM-NPA-SMAAGMTPSGM----SGPPMGMNQPRPP----GISPFGTHG 382
GP GP S +P S+ G M +GPP QP PP G P G HG
Sbjct: 384 GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHG 443
Query: 383 QRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTS 442
P Y G P + R + G+ G P P P P+ PP P +
Sbjct: 444 PP-PMDQYLGSTPVG---SGVYRLHQGK---GMMPPPPMGMMPPPPPP-PSGQPPPPPSG 495
Query: 443 PNYPGQRMPSQPSSGQYPPPTVNMGQYYK-PEQFNGQNNTFSGSS-----YSNYSQGNVN 496
P P Q+ QP PPP+ +M P Q N T S + +
Sbjct: 496 PLPPWQQQQQQPPPP--PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAA 553
Query: 497 RPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPP 542
P P N P+P PP+ PG+ PP P PP
Sbjct: 554 SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPP 599
Score = 43.5 bits (101), Expect = 0.001
Identities = 51/178 (28%), Positives = 59/178 (33%), Gaps = 45/178 (25%)
Query: 864 ALGPGPS-PYPLPPPP---------------GGTNSNDYSSQ---GNNYQGHGNFDFPH- 903
A P P+ P PPPP G + S Y G G G FPH
Sbjct: 341 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
Query: 904 -----GNPGGTSMNDFMHGPPQ-LSHPPDMPNNMAALEKPLSH----PMQETMP------ 947
G GG M +GPP PP P N P H PM + +
Sbjct: 401 LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGP--HPPGHHGPPPMDQYLGSTPVGS 458
Query: 948 -----HAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
H G P P + G+ P P SG P P PP Q +QPP P S
Sbjct: 459 GVYRLHQGKGMMPPPPM--GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514
Score = 38.9 bits (89), Expect = 0.026
Identities = 52/182 (28%), Positives = 63/182 (34%), Gaps = 43/182 (23%)
Query: 111 HQKSRQSDPP--GKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVT 168
HQ PP G +P PP S P G P PWQQ QPP
Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPPPP----SGPLP----PWQQQQQQPPPP----- 510
Query: 169 TVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNS-PQFAGQQQQFSAKA 227
S S P+ N + TT++ G S P + QQQQ +A A
Sbjct: 511 -----PPPSSSMASSTPLPWQQN----------TTTTTTSAGTGSIPPW--QQQQAAAAA 553
Query: 228 GPAQPYIQQSMYGRPNYPG-----SGGFGASYPGGPNAPAGMGIPPH-----TRPPADFT 277
P P +Q + P PG G P P AGM IPP + DF
Sbjct: 554 SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMIPPRGGDGPSHESEDFP 613
Query: 278 QP 279
+P
Sbjct: 614 RP 615
Score = 37.4 bits (85), Expect = 0.076
Identities = 48/203 (23%), Positives = 61/203 (30%), Gaps = 22/203 (10%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
GP P+PLP GG + N P P MN H PP PP
Sbjct: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPP------PWMQPPPPPMNQGPH-PPGHHGPP 445
Query: 926 DMPNNMAALEKPLS----HPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGA 981
M + + H + MP P P P P S PP
Sbjct: 446 PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQ 505
Query: 982 PPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSAL-------EGQAGAQGASDMPE----PS 1030
PPPP P + P + T S+ + QA A + P+ P+
Sbjct: 506 QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPT 565
Query: 1031 LDLLPELTNPDELLSYLDPPDLP 1053
+ LP P PP P
Sbjct: 566 MVPLPPGVQPPLPPGAPPPPPPP 588
Score = 35.8 bits (81), Expect = 0.22
Identities = 34/117 (29%), Positives = 38/117 (32%), Gaps = 21/117 (17%)
Query: 947 PHAGSSDQPHPSIQ-QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSD 1005
P G PHP G H HP H+ PPPP QPP PP HP
Sbjct: 390 PGGGPHSFPHPLPSLTGGHGGHPMQ------HNPNGPPPPWMQPP--PPPMNQGPHPPGH 441
Query: 1006 LTFNPSSALEGQAGA--------QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPS 1054
P G QG MP P + ++P P PP PS
Sbjct: 442 HGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS----GQPPPPPS 494
Score = 34.7 bits (78), Expect = 0.49
Identities = 60/248 (24%), Positives = 84/248 (33%), Gaps = 44/248 (17%)
Query: 183 GNPMA-NANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGR 241
G+PM N N P P P M N G + P G P Y+ + G
Sbjct: 410 GHPMQHNPNGPPPPWMQPPPPPM---NQGPHPPGHHGPP--------PMDQYLGSTPVGS 458
Query: 242 PNYPGSGGFG-------ASYPGGPNAPAGMGIPPHTRPPADFTQ-----PAAAAAAAAVA 289
Y G G P P P+G PP + P + Q P ++++A
Sbjct: 459 GVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMA 518
Query: 290 AAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPA 349
++ T T T G + P Q + PG P G NP
Sbjct: 519 SSTPLPWQQNTTTTTTSAGT--------GSIPPWQQQQAAAAASPG--APQMQG---NPT 565
Query: 350 SMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPG 409
+ P G+ PP+ P PP P G+ G +P + GP +S ++ RP
Sbjct: 566 MVPL---PPGVQ-PPLPPGAPPPPPPPPPGSAGMMIPPRGGDGPSHES---EDFPRPLVT 618
Query: 410 EPNYGNQQ 417
P QQ
Sbjct: 619 LPGRQPQQ 626
Score = 33.9 bits (76), Expect = 0.84
Identities = 54/219 (24%), Positives = 68/219 (31%), Gaps = 59/219 (26%)
Query: 826 PIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSND 885
P D ++ P G S ++ M+ P M M+ P PS P PPP G
Sbjct: 444 PPPMDQYLGSTPVG--SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQ 501
Query: 886 YSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQE- 944
Q PP PP P++ A PL P Q+
Sbjct: 502 QQQQQ---------------------------PP----PPPPPSSSMASSTPL--PWQQN 528
Query: 945 ---TMPHAGSSDQPHPSIQQGLHVPHPSSQS--------------GPPLHHSGAPPPPPS 987
T AG+ P QQ P + PPL GAPPPPP
Sbjct: 529 TTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLP-PGAPPPPPP 587
Query: 988 QPPRQ-----PPQAAPSSHPHSDLTFNPSSALEGQAGAQ 1021
PP PP+ S+ P L G+ Q
Sbjct: 588 PPPGSAGMMIPPRGGDGPSHESEDFPRPLVTLPGRQPQQ 626
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 67.0 bits (162), Expect = 9e-11
Identities = 63/228 (27%), Positives = 84/228 (36%), Gaps = 32/228 (14%)
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
PAS+G + PA+ P P N P PP + + Q P GP +S
Sbjct: 326 PASVGSTSGPATTPLASAPR----PAAPANNPPPPSLM---STTQSRPPWMNSGPS-ESR 377
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSG- 457
P + PG P G P +P P P +P Q P+ P
Sbjct: 378 PYHGMHGGGPGGPGGG-------------PHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW 424
Query: 458 -QYPPPTVNMG-----QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSP 511
Q PPP +N G + P +T GS QG PP P+ + P P
Sbjct: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP 484
Query: 512 VPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHN 559
G P PP P +PP+ Q +PP PP +M++ P P N
Sbjct: 485 PSGQPPPP--PSGPLPPW--QQQQQQPPPPPPPSSSMASSTPLPWQQN 528
Score = 66.2 bits (160), Expect = 2e-10
Identities = 81/299 (27%), Positives = 108/299 (36%), Gaps = 37/299 (12%)
Query: 273 PADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMN 332
PA + A +A A A + + TQ++ + GP+++ M+
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRP--PWMNSGPSESRPYHGMH 383
Query: 333 QPGPRGPASMGGSM-NPA-SMAAGMTPSGM----SGPPMGMNQPRPP----GISPFGTHG 382
GP GP S +P S+ G M +GPP QP PP G P G HG
Sbjct: 384 GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHG 443
Query: 383 QRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTS 442
P Y G P + R + G+ G P P P P+ PP P +
Sbjct: 444 PP-PMDQYLGSTPVG---SGVYRLHQGK---GMMPPPPMGMMPPPPPP-PSGQPPPPPSG 495
Query: 443 PNYPGQRMPSQPSSGQYPPPTVNMGQYYK-PEQFNGQNNTFSGSS-----YSNYSQGNVN 496
P P Q+ QP PPP+ +M P Q N T S + +
Sbjct: 496 PLPPWQQQQQQPPPP--PPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAA 553
Query: 497 RPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPP 555
P P N P+P PP+ PG+ PP PP PP M A PPPP
Sbjct: 554 SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP---------PPPPPGSAGMMYAPPPPP 603
Score = 43.5 bits (101), Expect = 0.001
Identities = 51/178 (28%), Positives = 59/178 (33%), Gaps = 45/178 (25%)
Query: 864 ALGPGPS-PYPLPPPP---------------GGTNSNDYSSQ---GNNYQGHGNFDFPH- 903
A P P+ P PPPP G + S Y G G G FPH
Sbjct: 341 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
Query: 904 -----GNPGGTSMNDFMHGPPQ-LSHPPDMPNNMAALEKPLSH----PMQETMP------ 947
G GG M +GPP PP P N P H PM + +
Sbjct: 401 LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGP--HPPGHHGPPPMDQYLGSTPVGS 458
Query: 948 -----HAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
H G P P + G+ P P SG P P PP Q +QPP P S
Sbjct: 459 GVYRLHQGKGMMPPPPM--GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514
Score = 38.5 bits (88), Expect = 0.034
Identities = 51/175 (29%), Positives = 61/175 (34%), Gaps = 40/175 (22%)
Query: 111 HQKSRQSDPP--GKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVT 168
HQ PP G +P PP S P G P PWQQ QPP
Sbjct: 464 HQGKGMMPPPPMGMMPPPPPPPSGQPPPPP----SGPLP----PWQQQQQQPPPP----- 510
Query: 169 TVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNS-PQFAGQQQQFSAKA 227
S S P+ N + TT++ G S P + QQQQ +A A
Sbjct: 511 -----PPPSSSMASSTPLPWQQN----------TTTTTTSAGTGSIPPW--QQQQAAAAA 553
Query: 228 GPAQPYIQQSMYGRPNYPGSG---GFGASYPGGPNAPAGMGI----PPHTRPPAD 275
P P +Q + P PG GA P P P G+ PP PP D
Sbjct: 554 SPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPPMD 608
Score = 37.4 bits (85), Expect = 0.076
Identities = 48/203 (23%), Positives = 61/203 (30%), Gaps = 22/203 (10%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
GP P+PLP GG + N P P MN H PP PP
Sbjct: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPP------PWMQPPPPPMNQGPH-PPGHHGPP 445
Query: 926 DMPNNMAALEKPLS----HPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGA 981
M + + H + MP P P P P S PP
Sbjct: 446 PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQ 505
Query: 982 PPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSAL-------EGQAGAQGASDMPE----PS 1030
PPPP P + P + T S+ + QA A + P+ P+
Sbjct: 506 QPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPT 565
Query: 1031 LDLLPELTNPDELLSYLDPPDLP 1053
+ LP P PP P
Sbjct: 566 MVPLPPGVQPPLPPGAPPPPPPP 588
Score = 35.8 bits (81), Expect = 0.22
Identities = 34/117 (29%), Positives = 38/117 (32%), Gaps = 21/117 (17%)
Query: 947 PHAGSSDQPHPSIQ-QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSD 1005
P G PHP G H HP H+ PPPP QPP PP HP
Sbjct: 390 PGGGPHSFPHPLPSLTGGHGGHPMQ------HNPNGPPPPWMQPP--PPPMNQGPHPPGH 441
Query: 1006 LTFNPSSALEGQAGA--------QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPS 1054
P G QG MP P + ++P P PP PS
Sbjct: 442 HGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS----GQPPPPPS 494
Score = 35.8 bits (81), Expect = 0.22
Identities = 49/174 (28%), Positives = 59/174 (33%), Gaps = 55/174 (31%)
Query: 113 KSRQSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWG 172
+ +Q PP P PP SSM+S P +PWQQNT + TT G
Sbjct: 501 QQQQQQPP---PPPPPSSSMASSTP-------------LPWQQNT-------TTTTTSAG 537
Query: 173 VTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQP 232
+ Q A + GNP M PG+ P G A P P
Sbjct: 538 TGSIPPWQQQQAAAAASPGAPQMQGNPT---MVPLPPGVQPPLPPG--------APPPPP 586
Query: 233 YIQQSMYGRPNYPGSGGFGASYPGGPNAP---------AGMGI---PPHTRPPA 274
P PGS G + P P P GMG+ PP PPA
Sbjct: 587 ---------PPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPA 631
Score = 35.0 bits (79), Expect = 0.38
Identities = 52/207 (25%), Positives = 65/207 (31%), Gaps = 61/207 (29%)
Query: 826 PIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSND 885
P D ++ P G S ++ M+ P M M+ P PS P PPP G
Sbjct: 444 PPPMDQYLGSTPVG--SGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQ 501
Query: 886 YSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQE- 944
Q PP PP P++ A PL P Q+
Sbjct: 502 QQQQQ---------------------------PP----PPPPPSSSMASSTPL--PWQQN 528
Query: 945 ---TMPHAGSSDQPHPSIQQGLHVPHPSSQS--------------GPPLHHSGAPPPPPS 987
T AG+ P QQ P + PPL GAPPPPP
Sbjct: 529 TTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLP-PGAPPPPPP 587
Query: 988 QPP-------RQPPQAAPSSHPHSDLT 1007
PP PP P P + +T
Sbjct: 588 PPPGSAGMMYAPPPPPPPPMDPSNFVT 614
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 67.0 bits (162), Expect = 9e-11
Identities = 110/411 (26%), Positives = 155/411 (37%), Gaps = 83/411 (20%)
Query: 193 MNPGGNPMAS--GMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGF 250
M PGG AS + +FAGQ Q S A P + Q + P +
Sbjct: 322 MGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG----ATPTLNQLLTSPS--PMMRSY 375
Query: 251 GASYP--GGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAA---------TATATA 299
G SYP P+AP PP ++P + Q AAA AAA AAA A A
Sbjct: 376 GGSYPEYSSPSAPP----PPPSQPQS---QAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
Query: 300 TATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGP-RGPASMGGSMNPASMAAGMTP- 357
+ AA Q+ + ++ G GPT + P + P G NP S +P
Sbjct: 429 SPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPY 487
Query: 358 -SGMSGPP-----------------MGMNQPR---PP-----GISPFGTHGQR-----MP 386
G GPP GM P+ PP G+S + GQ+ P
Sbjct: 488 PGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQP 547
Query: 387 QQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPN--------PPR 438
Q + P+ Q LP Q+ +R Y + + + YG SQ P PG+ PN R
Sbjct: 548 QPPHLPPQAQYLPSQSQQR-YQPQQDMSQEGYGTRSQPPLAPGK---PNHEDLNLIQQER 603
Query: 439 PLTSPNYPGQ--RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVN 496
P + P+ G +P+ + + + + +Q N + FS + + S
Sbjct: 604 PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGG 663
Query: 497 RPPRPV--PVANY-----PHSP--VPGNPTPPMTPGSSIPPYLSPSQDVKP 538
P PV PV + P SP +PG+ PP PGS P+ P
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP 714
Score = 57.8 bits (138), Expect = 5e-08
Identities = 110/475 (23%), Positives = 149/475 (31%), Gaps = 64/475 (13%)
Query: 116 QSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTN 175
Q+DPPG + P + + G + + + T QPP V G
Sbjct: 112 QADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLG-ALGTQQPP-----VAVPGGGGG 165
Query: 176 TSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGP--AQPY 233
+ N +A P + G A + G SP +A AG +
Sbjct: 166 PAAVPEFNNYYGSAA-PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
Query: 234 IQQSMYGRPNY----------PGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAA 283
+Q S G PN PG+GG G GG G G A A
Sbjct: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG--------GGGGAGAGGA 276
Query: 284 AAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMG 343
A AVAAAAA A A A + YG + + M PG G AS+
Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAG---YGVLSSPRQQGGGMMMGPGGGGAASLS 333
Query: 344 GSMNPASMAAGMTPSGMSGPPMG----MNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLP 399
+ ++ +G + P G +NQ ++G P+ + P P P
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP-P 392
Query: 400 IQNIKRPYPGEPNYGNQQYGPNSQFPTQPG-QYPAPNP--------PRPLTSPNYPGQRM 450
Q + G QQ G QY A +P P SP PG M
Sbjct: 393 SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
Query: 451 PSQPSSGQYP-----PPTVNMGQYYKPEQFNGQNNTFSGSSY-----SNYSQGNVNRPPR 500
S P P MG P Q++ + G SY Y G R P
Sbjct: 453 GRSQGSPMDPMVMKRPQLYGMGS--NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPG 510
Query: 501 PVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQD---VKPPFPPDIKPNMSALP 552
+ YP + PP + Y Q + P PP + P LP
Sbjct: 511 AMAGMQYPQQQM-----PPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLP 560
Score = 56.6 bits (135), Expect = 1e-07
Identities = 100/393 (25%), Positives = 142/393 (36%), Gaps = 76/393 (19%)
Query: 194 NPGGNPMAS----GMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGG 249
NP P S G + PG Q + A AG P QQ M P Y G
Sbjct: 476 NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP--QQQM--PPQYGQQGV 531
Query: 250 FGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQET 309
G G + PPH P A + + + T + A +
Sbjct: 532 SGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKP 591
Query: 310 QNKDINQYGPMGP----------------TQAYNSQFMNQPGPRGPASMGGSMNPA---- 349
++D+N P T+A S ++ G +S G NPA
Sbjct: 592 NHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG--STSSQGDQSNPAQSPF 649
Query: 350 ---------SMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPI 400
S+ G +PS + G P+G NQ R ISP G +MP Q PG + +S
Sbjct: 650 SPHASPHLSSIPGGPSPSPV-GSPVGSNQSRSGPISPASIPGSQMPPQP-PGSQSESSSH 707
Query: 401 QNIKR-PYPGEPNY--GNQ------QYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMP 451
+ + P P E + G Q QYGP T P P P+P + + Q+
Sbjct: 708 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQ---TGPSMSPHPSPGGQMHAGISSFQQSN 764
Query: 452 SQ----PSSGQYPPPTVNMGQYYKPEQFNG-QNNTFSGS------SYSNYSQG-NVNRPP 499
S P QY P G Y +P ++G + ++SG S +N G ++P
Sbjct: 765 SSGTYGPQMSQYGP----QGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 820
Query: 500 RPVPVANYP-----HSPVPGNPT--PPMTPGSS 525
VP+ P + P PGN + P +PG S
Sbjct: 821 GAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMS 853
Score = 54.7 bits (130), Expect = 5e-07
Identities = 101/408 (24%), Positives = 138/408 (33%), Gaps = 113/408 (27%)
Query: 120 PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQS 179
P P+ P+ S S +S + S+P Q QPPGS S ++ ++ +
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPA-------SIPGSQMPPQPPGSQSESSSHPALSQSPMP 716
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTS-NPGLNSPQFAG----QQQQFSAKAGP-AQPY 233
Q G NP P +G + S +P AG QQ S GP Y
Sbjct: 717 QERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 776
Query: 234 IQQSMYGRP---------NYPGSG-GFGAS-----YPGGPNAPAGMGIP----------- 267
Q Y RP +Y G G G G S + GP+ P G +P
Sbjct: 777 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCG-AVPLGRMPSAGMQN 835
Query: 268 ----------------------PHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAA 305
P PP A AAAAV AAA + + +
Sbjct: 836 RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 895
Query: 306 LQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPM 365
+ NQ G M + Y +QP + M P SMA M S S +
Sbjct: 896 M--------NQSGLMASSSPY-----SQPMNNSSSLMNTQAPPYSMAPAMVNS--SAASV 940
Query: 366 GMNQPRPPGIS--PFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQ 423
G+ PG S P + T P+P+S + +Y +Q SQ
Sbjct: 941 GLADMMSPGESKLPLPLKADGKEEGT---PQPES----------KSKDSYSSQGI---SQ 984
Query: 424 FPTQPGQYPAPNPPRP---------------LTSPNYPGQRMPSQPSS 456
PT PG P P+P P ++SP +P + PS P S
Sbjct: 985 PPT-PGNLPVPSPMSPSSASISSFHGDESDSISSPGWP--KTPSSPKS 1029
Score = 37.7 bits (86), Expect = 0.058
Identities = 51/215 (23%), Positives = 77/215 (35%), Gaps = 19/215 (8%)
Query: 824 PVPIKSDLHIKDDPDGIPSKRFKTMSPSQM-IMPNVMEMIAALGPGPSPYPLPPPPGGTN 882
P ++ L G S + +P+Q P+ ++++ GPSP P+ P G
Sbjct: 618 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ 677
Query: 883 SNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPM 942
S + G P PG S + P LS P MP + +P
Sbjct: 678 SRSGPISPASIPGS---QMPPQPPGSQSESS---SHPALSQSP-MPQERGFMAGTQRNPQ 730
Query: 943 --QETMPHAGSSDQPHPSIQQGLHVPHPSSQS-------GPPLHHSGAPPPPPSQPPR-Q 992
Q G S PHPS +H S Q GP + G P S+PP
Sbjct: 731 MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYG-PQGNYSRPPAYS 789
Query: 993 PPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMP 1027
+A S P + + ++ + GQ +Q +P
Sbjct: 790 GVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVP 824
Score = 36.6 bits (83), Expect = 0.13
Identities = 47/192 (24%), Positives = 66/192 (34%), Gaps = 42/192 (21%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPD 926
PG P PP GG Y Q N Y+ H D M+GPP H D
Sbjct: 1329 PGQGPPSGQPPYGGHQPGLYPQQPN-YKRH---------------MDGMYGPPAKRHEGD 1372
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSS-----------DQPHPSIQQGLHVPHPSSQSGPP 975
M N S QE G S P+P ++ + P G P
Sbjct: 1373 MYN------MQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIP 1426
Query: 976 LHHSGAP-PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLL 1034
G P S+ P+Q AA + P+ P +G G A P P ++
Sbjct: 1427 PQMMGGPLQSSSSEGPQQNMWAARNDMPY------PYQNRQGPGGPTQAP--PYPGMNRT 1478
Query: 1035 PELTNPDELLSY 1046
++ PD+ +++
Sbjct: 1479 DDMMVPDQRINH 1490
Score = 34.3 bits (77), Expect = 0.64
Identities = 97/419 (23%), Positives = 133/419 (31%), Gaps = 98/419 (23%)
Query: 117 SDPPGKL-PMQPPLSSMSSMKPTLSH-SDGSFPY-----DSVPWQQNTNQP--------- 160
S P G++ PMQ SS S+ S SD SFP + P+QQ + P
Sbjct: 1199 STPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYE 1258
Query: 161 ------------PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGN---------- 198
PGS T + N+S + + A + + G
Sbjct: 1259 PNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYD 1318
Query: 199 ----PMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQ---SMYGRPNYPGSGG-- 249
P P P + G Q P QP ++ MYG P G
Sbjct: 1319 RRHEPYGQQYPGQGPPSGQPPYGGHQPGLY----PQQPNYKRHMDGMYGPPAKRHEGDMY 1374
Query: 250 --------------FGASYPGGPNAPAGMGIP-PHTRP----PADFTQPAAAAAAAAVAA 290
+G SY G P P P++R P
Sbjct: 1375 NMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPL 1434
Query: 291 AAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQ------PGPR------G 338
++++ AA + N+ GP GPTQA MN+ P R
Sbjct: 1435 QSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQW 1494
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
P+ + S +A M P ++ PP Q PP + H R P P +SL
Sbjct: 1495 PSHVSQRQPYMSSSASMQP--ITRPPQPSYQ-TPPSLP---NHISRAPS---PASFQRSL 1545
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPP---RPLTSPNYPGQRMPSQP 454
+ P P+ Q+ P PT P P PP R +T P PG SQP
Sbjct: 1546 ENRMSPSKSPFLPSMKMQKVMPT--VPTSQVTGPPPQPPPIRREITFP--PGSVEASQP 1600
Score = 33.1 bits (74), Expect = 1.4
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 949 AGSSDQPH---PSIQQGLHVPHPSSQSG----PPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
AG + P P++ Q L P P +S P APPPPPSQP Q A ++
Sbjct: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA 406
Score = 32.0 bits (71), Expect = 3.2
Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 33/155 (21%)
Query: 866 GPGP-SPYPLPPPPGGTNSNDYSSQG---NNYQGHGNFDFPHGN-------------PGG 908
GPG + +PP G SS+G N + + +P+ N PG
Sbjct: 1416 GPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGM 1475
Query: 909 TSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHP 968
+D M +++H P++++ + P+ SS S+Q P P
Sbjct: 1476 NRTDDMMVPDQRINHESQWPSHVS-----------QRQPYMSSS----ASMQPITRPPQP 1520
Query: 969 SSQSGPPL-HHSGAPPPPPSQPPRQPPQAAPSSHP 1002
S Q+ P L +H P P S + +PS P
Sbjct: 1521 SYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP 1555
Score = 31.6 bits (70), Expect = 4.2
Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 28/155 (18%)
Query: 886 YSSQGNNYQG------HGNFDFPHGN-----PGGTSMN----DFMHGPPQLSHPPDMPNN 930
Y+ G +Y G G + +P+ PG + M GP Q S N
Sbjct: 1386 YNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQN 1445
Query: 931 MAALEKPLSHPMQETMPHAGSSDQP-HPSIQQ--GLHVPH---------PSSQSG-PPLH 977
M A + +P Q G + P +P + + + VP PS S P
Sbjct: 1446 MWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYM 1505
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
S A P ++PP+ Q PS H +P+S
Sbjct: 1506 SSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1540
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 67.0 bits (162), Expect = 9e-11
Identities = 110/411 (26%), Positives = 155/411 (37%), Gaps = 83/411 (20%)
Query: 193 MNPGGNPMAS--GMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGF 250
M PGG AS + +FAGQ Q S A P + Q + P +
Sbjct: 322 MGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG----ATPTLNQLLTSPS--PMMRSY 375
Query: 251 GASYP--GGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAA---------TATATA 299
G SYP P+AP PP ++P + Q AAA AAA AAA A A
Sbjct: 376 GGSYPEYSSPSAPP----PPPSQPQS---QAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
Query: 300 TATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGP-RGPASMGGSMNPASMAAGMTP- 357
+ AA Q+ + ++ G GPT + P + P G NP S +P
Sbjct: 429 SPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPY 487
Query: 358 -SGMSGPP-----------------MGMNQPR---PP-----GISPFGTHGQR-----MP 386
G GPP GM P+ PP G+S + GQ+ P
Sbjct: 488 PGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQP 547
Query: 387 QQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPN--------PPR 438
Q + P+ Q LP Q+ +R Y + + + YG SQ P PG+ PN R
Sbjct: 548 QPPHLPPQAQYLPSQSQQR-YQPQQDMSQEGYGTRSQPPLAPGK---PNHEDLNLIQQER 603
Query: 439 PLTSPNYPGQ--RMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVN 496
P + P+ G +P+ + + + + +Q N + FS + + S
Sbjct: 604 PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGG 663
Query: 497 RPPRPV--PVANY-----PHSP--VPGNPTPPMTPGSSIPPYLSPSQDVKP 538
P PV PV + P SP +PG+ PP PGS P+ P
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP 714
Score = 57.8 bits (138), Expect = 5e-08
Identities = 110/475 (23%), Positives = 149/475 (31%), Gaps = 64/475 (13%)
Query: 116 QSDPPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTN 175
Q+DPPG + P + + G + + + T QPP V G
Sbjct: 112 QADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLG-ALGTQQPP-----VAVPGGGGG 165
Query: 176 TSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGP--AQPY 233
+ N +A P + G A + G SP +A AG +
Sbjct: 166 PAAVPEFNNYYGSAA-PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
Query: 234 IQQSMYGRPNY----------PGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAA 283
+Q S G PN PG+GG G GG G G A A
Sbjct: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG--------GGGGAGAGGA 276
Query: 284 AAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMG 343
A AVAAAAA A A A + YG + + M PG G AS+
Sbjct: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAG---YGVLSSPRQQGGGMMMGPGGGGAASLS 333
Query: 344 GSMNPASMAAGMTPSGMSGPPMG----MNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLP 399
+ ++ +G + P G +NQ ++G P+ + P P P
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP-P 392
Query: 400 IQNIKRPYPGEPNYGNQQYGPNSQFPTQPG-QYPAPNP--------PRPLTSPNYPGQRM 450
Q + G QQ G QY A +P P SP PG M
Sbjct: 393 SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
Query: 451 PSQPSSGQYP-----PPTVNMGQYYKPEQFNGQNNTFSGSSY-----SNYSQGNVNRPPR 500
S P P MG P Q++ + G SY Y G R P
Sbjct: 453 GRSQGSPMDPMVMKRPQLYGMGS--NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPG 510
Query: 501 PVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQD---VKPPFPPDIKPNMSALP 552
+ YP + PP + Y Q + P PP + P LP
Sbjct: 511 AMAGMQYPQQQM-----PPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLP 560
Score = 56.6 bits (135), Expect = 1e-07
Identities = 100/393 (25%), Positives = 142/393 (36%), Gaps = 76/393 (19%)
Query: 194 NPGGNPMAS----GMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGG 249
NP P S G + PG Q + A AG P QQ M P Y G
Sbjct: 476 NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP--QQQM--PPQYGQQGV 531
Query: 250 FGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQET 309
G G + PPH P A + + + T + A +
Sbjct: 532 SGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKP 591
Query: 310 QNKDINQYGPMGP----------------TQAYNSQFMNQPGPRGPASMGGSMNPA---- 349
++D+N P T+A S ++ G +S G NPA
Sbjct: 592 NHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG--STSSQGDQSNPAQSPF 649
Query: 350 ---------SMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPI 400
S+ G +PS + G P+G NQ R ISP G +MP Q PG + +S
Sbjct: 650 SPHASPHLSSIPGGPSPSPV-GSPVGSNQSRSGPISPASIPGSQMPPQP-PGSQSESSSH 707
Query: 401 QNIKR-PYPGEPNY--GNQ------QYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMP 451
+ + P P E + G Q QYGP T P P P+P + + Q+
Sbjct: 708 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQ---TGPSMSPHPSPGGQMHAGISSFQQSN 764
Query: 452 SQ----PSSGQYPPPTVNMGQYYKPEQFNG-QNNTFSGS------SYSNYSQG-NVNRPP 499
S P QY P G Y +P ++G + ++SG S +N G ++P
Sbjct: 765 SSGTYGPQMSQYGP----QGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 820
Query: 500 RPVPVANYP-----HSPVPGNPT--PPMTPGSS 525
VP+ P + P PGN + P +PG S
Sbjct: 821 GAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMS 853
Score = 45.8 bits (107), Expect = 2e-04
Identities = 77/311 (24%), Positives = 103/311 (33%), Gaps = 77/311 (24%)
Query: 120 PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQS 179
P P+ P+ S S +S + S+P Q QPPGS S ++ ++ +
Sbjct: 664 PSPSPVGSPVGSNQSRSGPISPA-------SIPGSQMPPQPPGSQSESSSHPALSQSPMP 716
Query: 180 QVLGNPMANANNPMNPGGNPMASGMTTS-NPGLNSPQFAG----QQQQFSAKAGP-AQPY 233
Q G NP P +G + S +P AG QQ S GP Y
Sbjct: 717 QERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 776
Query: 234 IQQSMYGRP---------NYPGSG-GFGAS-----YPGGPNAPAGMGIP----------- 267
Q Y RP +Y G G G G S + GP+ P G +P
Sbjct: 777 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCG-AVPLGRMPSAGMQN 835
Query: 268 ----------------------PHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAA 305
P PP A AAAAV AAA + + +
Sbjct: 836 RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 895
Query: 306 LQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPM 365
+ NQ G M + Y +QP + M P SMA M S S +
Sbjct: 896 M--------NQSGLMASSSPY-----SQPMNNSSSLMNTQAPPYSMAPAMVNS--SAASV 940
Query: 366 GMNQPRPPGIS 376
G+ PG S
Sbjct: 941 GLADMMSPGES 951
Score = 45.4 bits (106), Expect = 3e-04
Identities = 77/321 (23%), Positives = 121/321 (37%), Gaps = 32/321 (9%)
Query: 160 PPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQ 219
P G+ + +++ + ++ SQ + +NP +P AS +S PG SP G
Sbjct: 618 PTGTEATLSSAVSASGSTSSQ------GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGS 671
Query: 220 QQQFS-AKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGM--GIPPHTRPPADF 276
+ +++GP P P PGS +S+P +P G T+
Sbjct: 672 PVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQM 731
Query: 277 TQPAAAAAAAAVAAAAATATATATATVAALQE-----TQNKDINQYGPMGPTQ---AYN- 327
Q +++ + A +++ Q+ T ++QYGP G AY+
Sbjct: 732 AQYGPQQTGPSMSPHPSPG-GQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG 790
Query: 328 --SQFMNQPGPRGPASMGGSMNPA--SMAAGMTPSGMSGPPMGM-NQPRPPGISPFGTHG 382
S + PGP S M+ S G P G P GM N+P P +S
Sbjct: 791 VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRM-PSAGMQNRPFPGNMSSMTPSS 849
Query: 383 QRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTS 442
M QQ PG P P+ + R E Q NS ++ G +P N + S
Sbjct: 850 PGMSQQGGPGMGP---PMPTVNRK-AQEAAAAVMQAAANSA-QSRQGSFPGMNQSGLMAS 904
Query: 443 PNYPGQRMPSQPS--SGQYPP 461
+ Q M + S + Q PP
Sbjct: 905 SSPYSQPMNNSSSLMNTQAPP 925
Score = 37.7 bits (86), Expect = 0.058
Identities = 51/215 (23%), Positives = 77/215 (35%), Gaps = 19/215 (8%)
Query: 824 PVPIKSDLHIKDDPDGIPSKRFKTMSPSQM-IMPNVMEMIAALGPGPSPYPLPPPPGGTN 882
P ++ L G S + +P+Q P+ ++++ GPSP P+ P G
Sbjct: 618 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ 677
Query: 883 SNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPM 942
S + G P PG S + P LS P MP + +P
Sbjct: 678 SRSGPISPASIPGS---QMPPQPPGSQSESS---SHPALSQSP-MPQERGFMAGTQRNPQ 730
Query: 943 --QETMPHAGSSDQPHPSIQQGLHVPHPSSQS-------GPPLHHSGAPPPPPSQPPR-Q 992
Q G S PHPS +H S Q GP + G P S+PP
Sbjct: 731 MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYG-PQGNYSRPPAYS 789
Query: 993 PPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMP 1027
+A S P + + ++ + GQ +Q +P
Sbjct: 790 GVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVP 824
Score = 36.6 bits (83), Expect = 0.13
Identities = 47/192 (24%), Positives = 66/192 (34%), Gaps = 42/192 (21%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPD 926
PG P PP GG Y Q N Y+ H D M+GPP H D
Sbjct: 1276 PGQGPPSGQPPYGGHQPGLYPQQPN-YKRH---------------MDGMYGPPAKRHEGD 1319
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSS-----------DQPHPSIQQGLHVPHPSSQSGPP 975
M N S QE G S P+P ++ + P G P
Sbjct: 1320 MYN------MQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIP 1373
Query: 976 LHHSGAP-PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLL 1034
G P S+ P+Q AA + P+ P +G G A P P ++
Sbjct: 1374 PQMMGGPLQSSSSEGPQQNMWAARNDMPY------PYQNRQGPGGPTQAP--PYPGMNRT 1425
Query: 1035 PELTNPDELLSY 1046
++ PD+ +++
Sbjct: 1426 DDMMVPDQRINH 1437
Score = 34.3 bits (77), Expect = 0.64
Identities = 97/419 (23%), Positives = 133/419 (31%), Gaps = 98/419 (23%)
Query: 117 SDPPGKL-PMQPPLSSMSSMKPTLSH-SDGSFPY-----DSVPWQQNTNQP--------- 160
S P G++ PMQ SS S+ S SD SFP + P+QQ + P
Sbjct: 1146 STPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYE 1205
Query: 161 ------------PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGN---------- 198
PGS T + N+S + + A + + G
Sbjct: 1206 PNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYD 1265
Query: 199 ----PMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQ---SMYGRPNYPGSGG-- 249
P P P + G Q P QP ++ MYG P G
Sbjct: 1266 RRHEPYGQQYPGQGPPSGQPPYGGHQPGLY----PQQPNYKRHMDGMYGPPAKRHEGDMY 1321
Query: 250 --------------FGASYPGGPNAPAGMGIP-PHTRP----PADFTQPAAAAAAAAVAA 290
+G SY G P P P++R P
Sbjct: 1322 NMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPL 1381
Query: 291 AAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQ------PGPR------G 338
++++ AA + N+ GP GPTQA MN+ P R
Sbjct: 1382 QSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQW 1441
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
P+ + S +A M P ++ PP Q PP + H R P P +SL
Sbjct: 1442 PSHVSQRQPYMSSSASMQP--ITRPPQPSYQ-TPPSLP---NHISRAPS---PASFQRSL 1492
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPP---RPLTSPNYPGQRMPSQP 454
+ P P+ Q+ P PT P P PP R +T P PG SQP
Sbjct: 1493 ENRMSPSKSPFLPSMKMQKVMPT--VPTSQVTGPPPQPPPIRREITFP--PGSVEASQP 1547
Score = 33.1 bits (74), Expect = 1.4
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 949 AGSSDQPH---PSIQQGLHVPHPSSQSG----PPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
AG + P P++ Q L P P +S P APPPPPSQP Q A ++
Sbjct: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA 406
Score = 32.0 bits (71), Expect = 3.2
Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 33/155 (21%)
Query: 866 GPGP-SPYPLPPPPGGTNSNDYSSQG---NNYQGHGNFDFPHGN-------------PGG 908
GPG + +PP G SS+G N + + +P+ N PG
Sbjct: 1363 GPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGM 1422
Query: 909 TSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHP 968
+D M +++H P++++ + P+ SS S+Q P P
Sbjct: 1423 NRTDDMMVPDQRINHESQWPSHVS-----------QRQPYMSSS----ASMQPITRPPQP 1467
Query: 969 SSQSGPPL-HHSGAPPPPPSQPPRQPPQAAPSSHP 1002
S Q+ P L +H P P S + +PS P
Sbjct: 1468 SYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP 1502
Score = 31.6 bits (70), Expect = 4.2
Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 28/155 (18%)
Query: 886 YSSQGNNYQG------HGNFDFPHGN-----PGGTSMN----DFMHGPPQLSHPPDMPNN 930
Y+ G +Y G G + +P+ PG + M GP Q S N
Sbjct: 1333 YNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQN 1392
Query: 931 MAALEKPLSHPMQETMPHAGSSDQP-HPSIQQ--GLHVPH---------PSSQSG-PPLH 977
M A + +P Q G + P +P + + + VP PS S P
Sbjct: 1393 MWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYM 1452
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSS 1012
S A P ++PP+ Q PS H +P+S
Sbjct: 1453 SSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 65.9 bits (159), Expect = 2e-10
Identities = 85/344 (24%), Positives = 117/344 (34%), Gaps = 34/344 (9%)
Query: 224 SAKAGPAQPYIQQSMYGRPNYPGSG----GFGASYPGGPNAPAGMGIPPHTRPPADFTQP 279
+A AGPA P + + P P +G G G GP +P +P PPA +P
Sbjct: 70 AAGAGPAAP-AEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRP 128
Query: 280 ---AAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGP 336
+A + A V AAAA A A + + GP PGP
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG--PGPGP 186
Query: 337 RGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQ 396
PA G + AA + + P + + P + P +P+ PG Q
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP-------LPKPAAPGTVIQ 239
Query: 397 SLPIQNIKRP-YPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPS 455
+ P P P P+ P + P P P P PP P T PG +
Sbjct: 240 TPPFVGAAAPPAPAAPS------PPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTA 293
Query: 456 SGQYPPPTV-----NMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHS 510
+ PPP + G P G SG G P P A P
Sbjct: 294 APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP----GPGAAAAAPAPGVKAESPKR 349
Query: 511 PVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
V P T +S P + S + P + P+ +A+PPP
Sbjct: 350 VVQAAPPAAQTLAASGPASTAASMVIGPTMQGAL-PSPAAVPPP 392
Score = 52.0 bits (123), Expect = 3e-06
Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 43/214 (20%)
Query: 826 PIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSND 885
P+ + + P+ P+ P++ P + A GPGP P P P P G +
Sbjct: 139 PVPAAAAVAAGPEPAPA------GPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGP 192
Query: 886 YSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSH-PMQE 944
++Q N +N P +S + P + L KP + + +
Sbjct: 193 GAAQTLN-------------GSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239
Query: 945 TMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQP--------PRQPPQA 996
T P G++ P P+ P P + P + PPPPP+ P PP A
Sbjct: 240 TPPFVGAAAPPAPA------APSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTA 293
Query: 997 APSSHPHSDLTFNPSSALEGQAGAQGASDMPEPS 1030
AP+ P P++A G G+ GA+ P P+
Sbjct: 294 APAVPP-------PAAAQNG--GSAGAAPAPAPA 318
Score = 46.6 bits (109), Expect = 1e-04
Identities = 62/243 (25%), Positives = 84/243 (34%), Gaps = 33/243 (13%)
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
PA G+ PA+ A G + PP G +P G G R P GP P +
Sbjct: 67 PAGAAGA-GPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVP-AGPAPPAA 124
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQ 458
+ RP P E + G+ P + G PAP P P R P G
Sbjct: 125 KL----RP-PPEGSAGSCAPVPAAA-AVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP 178
Query: 459 YPPPTVNMGQYYKP---EQFNGQNNTFSGSSYSNYSQGNVNRPPR---PVPVANYPHS-- 510
P P G+ P + NG + + + VN P P+P P +
Sbjct: 179 GPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVI 238
Query: 511 -----------PVPGNPTPPMTPGSSIP------PYLSPSQDVKPPFPPDIKPNMSALPP 553
P P P+PP P + P P +P+ +PP P P + P
Sbjct: 239 QTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVP 298
Query: 554 PPA 556
PPA
Sbjct: 299 PPA 301
Score = 36.6 bits (83), Expect = 0.13
Identities = 62/262 (23%), Positives = 81/262 (30%), Gaps = 12/262 (4%)
Query: 120 PGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQS 179
PG + PP ++ + S + P + P PP ++ +
Sbjct: 234 PGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTA 293
Query: 180 QVLGNPMANANNPMNPGGNPM---ASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQ 236
P A A N + G P A+G G P A KA + +Q
Sbjct: 294 APAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA 353
Query: 237 SMYGRPNYPGSG--GFGASYPGGPNAPAGMGIPPHTRPPADFTQPA--AAAAAAAVAAAA 292
+ SG AS GP + P PPA T AA A + +
Sbjct: 354 APPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLS 413
Query: 293 ATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGS--MNPAS 350
T TAT + A L T P PT N F PG S G M P
Sbjct: 414 RTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQN--FQLPPGMVLVRSENGQLLMIPQQ 471
Query: 351 MAAGMTPSGMSGPPMGMNQPRP 372
A M + P M PRP
Sbjct: 472 ALAQMQAQAHAQPQTTM-APRP 492
Score = 32.0 bits (71), Expect = 3.2
Identities = 62/254 (24%), Positives = 75/254 (29%), Gaps = 37/254 (14%)
Query: 225 AKAGPAQPYIQQSMYGRPNY---PGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAA 281
A AGPA+P ++ R PG G PG PAG G A +
Sbjct: 153 APAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPG---KPAGPGAAQTLNGSAALLN-SH 208
Query: 282 AAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPAS 341
AAA AV+ A A T + G P P P PA+
Sbjct: 209 HAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268
Query: 342 MGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGIS------------------PFGTHGQ 383
PA P +GPP PP + P G GQ
Sbjct: 269 APPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQ 328
Query: 384 RMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGN--QQYGPNSQF------PTQPGQYPAP- 434
P P P + ++ KR P GP S PT G P+P
Sbjct: 329 PGPGAAAAAPAP-GVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPA 387
Query: 435 --NPPRPLTSPNYP 446
PP P T P
Sbjct: 388 AVPPPAPGTPTGLP 401
Score = 30.8 bits (68), Expect = 7.1
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 15/120 (12%)
Query: 924 PPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHV---PHPSSQSGPPLHHSG 980
PP P A L +P HP P A + P + Q G P P+ +G P SG
Sbjct: 270 PPPPPPAPATLARPPGHPAGP--PTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 981 APPPPPS----------QPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPS 1030
P P + + P++ QAAP + + S+A G +P P+
Sbjct: 328 QPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPA 387
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.9 bits (159), Expect = 2e-10
Identities = 106/426 (24%), Positives = 158/426 (37%), Gaps = 83/426 (19%)
Query: 124 PMQPPLSSMSSMKPTLSHSDGS-------FPYD-SVPWQQNTNQPPGSLSVVTTVWGVTN 175
PM+ P SS SS S S S FP ++P ++ PP SLSV T
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 176 TS-QSQVL-----------GNPMANANNPMNPGGNPMASG-MTTSNPGLNSPQFAGQQQQ 222
S SQ + G +AN+N +PG P ++G +T++P +++ QQQQ
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSN--AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQ 487
Query: 223 FSAKAGPAQPYIQQSMYGRPNYPGSGGF------GASYPGGPNA--PAGMGIPPHTRPPA 274
+ Q QQ +G P G F G+S+ P A P+ + P+ PA
Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPA 547
Query: 275 DFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP 334
P + + + ++++ ++ + Q Y P+ + Q P
Sbjct: 548 HLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ-------GSYPCSHPSPSQGPQGAPYP 600
Query: 335 GPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQ------Q 388
P P S +++ A + S P G PPG P+ G+R P
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASS-----PAGYKTASPPGPPPY---GKRAPSPGAYKTA 652
Query: 389 TYPGPRPQSLPIQNIKRPYPGEPNY--GNQQYGPNSQFPTQPGQYPAPNPPR-PLTSPNY 445
T PG +P S P P P Y + GP + P P P P PP P P+
Sbjct: 653 TPPGYKPGSPPSFRTGTP----PGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSL 708
Query: 446 PGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVA 505
P P+ P+SG PP + + E++ P PVP A
Sbjct: 709 PPP--PAAPASG--PPLSATQIKQEPAEEY--------------------ETPESPVPPA 744
Query: 506 NYPHSP 511
P P
Sbjct: 745 RSPSPP 750
Score = 61.2 bits (147), Expect = 5e-09
Identities = 94/423 (22%), Positives = 141/423 (33%), Gaps = 72/423 (17%)
Query: 161 PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQ 220
P + T V G S P N P P P+ + + S PGL + G
Sbjct: 271 PPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPL-NNASASPPGLGAQPLPGHL 329
Query: 221 QQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPA 280
P+ G G G P GP + PH+ PPA + PA
Sbjct: 330 PS-------------------PHAMGQGMGGL--PPGPEKGPTLAPSPHSLPPASSSAPA 368
Query: 281 --------AAAAAAAVAAAAATATATATATVAALQ---------------ETQNKDINQY 317
++++++A A++++++++++ + A Q N+
Sbjct: 369 PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYT 428
Query: 318 GPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISP 377
P P+QA SQ P P G + +P G P G P +S
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHP----------GPFPPSTGAQSTAHPPVST 478
Query: 378 FGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPP 437
H Q+ QQ Q ++ + ++GN P FP P + + +
Sbjct: 479 HHHHHQQQQQQQQ----------QQQQQQQQQQQHHGNSGPPPPGAFP-HPLEGGSSHHA 527
Query: 438 RPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNV-- 495
P G P P PPP + Y NG + S +S S+ SQG+
Sbjct: 528 HPYAMSPSLGSLRPYPPGPAHLPPPHSQVS--YSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 496 --NRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPP 553
P + A YP PVP T T + I S K PP P P
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645
Query: 554 PPA 556
P A
Sbjct: 646 PGA 648
Score = 57.0 bits (136), Expect = 9e-08
Identities = 115/459 (25%), Positives = 142/459 (30%), Gaps = 100/459 (21%)
Query: 119 PPGKLPMQPPLS--SMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNT 176
PP P QP S S+ PT H+ P S +Q PP + G
Sbjct: 171 PPDSTPRQPEASFEPHPSVTPTGYHAPME-PPTSRMFQAPPGAPPPHPQLYPGGTG---- 225
Query: 177 SQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQ 236
VL P PM P G AS + N G P P P
Sbjct: 226 ---GVLSGP------PMGPKGGGAASSVGGPNGGKQHPP-------------PTTPISVS 263
Query: 237 SMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATAT 296
S SG GA P P G G P PPA+F P A
Sbjct: 264 S---------SGASGAPPTKPPTTPVGGGNLPSAPPPANF--PHVTPNLPPPPALRPLNN 312
Query: 297 ATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMT 356
A+A+ Q P + M Q MGG +
Sbjct: 313 ASASPPGLGAQPL------------PGHLPSPHAMGQ-------GMGGLPPGPEKGPTLA 353
Query: 357 PSGMSGPPMGMNQPRPPGISPF----------GTHGQRMPQQTYPGPRPQSLPIQNIKRP 406
PS S PP + P PP P+ + P P Q+LP P
Sbjct: 354 PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP 413
Query: 407 YPGEPNYGNQQYGPNSQFPTQPGQY-----PAPNPP--RPLTSPN-YPGQRMPSQPSSGQ 458
P + NQ P P+ P Q P P PP R L + N +PG PS +
Sbjct: 414 PPTSLSVSNQP--PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST 471
Query: 459 YPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTP 518
PP V+ ++ +Q Q GN PP PG
Sbjct: 472 AHPP-VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP-------------PGAFPH 517
Query: 519 PMTPGSS--IPPY-LSPSQDVKPPFPPDIKPNMSALPPP 554
P+ GSS PY +SPS P+P P + LPPP
Sbjct: 518 PLEGGSSHHAHPYAMSPSLGSLRPYP----PGPAHLPPP 552
Score = 53.1 bits (126), Expect = 1e-06
Identities = 86/413 (20%), Positives = 135/413 (32%), Gaps = 75/413 (18%)
Query: 192 PMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFG 251
P +P G + ++ G + P+ Q + ++ S+Y +
Sbjct: 99 PQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSP----------SIYSPGSVENDSDSS 148
Query: 252 ASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQN 311
+ GP P PP PP+ QP + A+ + T T A ++ +
Sbjct: 149 SGLSQGPARPYH---PPPLFPPSP--QPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 312 KDIN----------QYGPMGPTQAYNSQFMNQPGPRGPASMGGSMN-----PASMAAGMT 356
+ Q P G + M G +S+GG P + ++
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVS 263
Query: 357 PSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQ 416
SG SG P P P +P G G +P P P P N+ P P
Sbjct: 264 SSGASGAP-----PTKPPTTPVG--GGNLPSAPPPANFPHVTP--NLPPPPALRPLNNAS 314
Query: 417 QYGPNSQFPTQPGQYPAPN---------PPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMG 467
P PG P+P+ PP P P P+S P P +
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF- 373
Query: 468 QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNP----------T 517
+ +++ + SS S+ S + + P + +YPHS P T
Sbjct: 374 -----PYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYT 428
Query: 518 PPMTPGSSI--------PPY---LSPSQDVKPPFPPDIKPNMSALPPPPANHN 559
P P ++ PPY L+ S PFPP +A PP +H+
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Score = 41.2 bits (95), Expect = 0.005
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 906 PGGTSMNDFMHGPPQLSHPPDMP--NNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGL 963
P +F H P L PP + NN +A S P P G PH ++ QG+
Sbjct: 286 PSAPPPANFPHVTPNLPPPPALRPLNNASA-----SPPGLGAQPLPGHLPSPH-AMGQGM 339
Query: 964 HVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGA 1023
P + GP L S PP S PP P S S S+A + + +
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSS-----SAAASSSSSSSSS 394
Query: 1024 SDMPEPSLDLLP 1035
S P P+ LP
Sbjct: 395 SASPFPASQALP 406
Score = 38.1 bits (87), Expect = 0.045
Identities = 42/177 (23%), Positives = 59/177 (33%), Gaps = 25/177 (14%)
Query: 869 PSPYPLPPP-------PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQL 921
P P LPPP G N SS N+ +P +P + GP
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ------GPQGA 597
Query: 922 SHP----PDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLH 977
+P P + + A L ++ + +S P + P + PP +
Sbjct: 598 PYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGY 657
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG-----QAGAQGASDMPEP 1029
G+PP S PP +S P TF P S G AG G +P P
Sbjct: 658 KPGSPP---SFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPP 711
Score = 37.7 bits (86), Expect = 0.058
Identities = 66/272 (24%), Positives = 91/272 (33%), Gaps = 40/272 (14%)
Query: 321 GPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGT 380
GP + S+ PG +S G + A + P Q R IS +
Sbjct: 22 GPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESES 81
Query: 381 HGQRMPQQTYPG---PRPQS------LPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPG-- 429
P++T PRPQS L +++ +P +Q S PG
Sbjct: 82 EETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSV 141
Query: 430 -----------QYPA-PNPPRPLTSPN-YPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFN 476
Q PA P P PL P+ P P QP + P P+V Y+ P +
Sbjct: 142 ENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPME-P 200
Query: 477 GQNNTFSGSS---------YSNYSQGNVNRPPRPVPVANYPHSPVPG-----NPTPPMTP 522
+ F Y + G ++ PP P S V G PP TP
Sbjct: 201 PTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG-PKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 523 GSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
S S + KPP P N+ + PPP
Sbjct: 260 ISVSSSGASGAPPTKPPTTPVGGGNLPSAPPP 291
Score = 37.4 bits (85), Expect = 0.076
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 870 SPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPN 929
SP L G + ++D SS + P G+ ND LS P P
Sbjct: 101 SPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVEND-SDSSSGLSQGPARPY 159
Query: 930 NMAALEKPLSHPMQETMPHAGSSDQPHPSI-QQGLHVP--HPSSQ--SGPPLHHSGAPPP 984
+ L P P T +S +PHPS+ G H P P+S+ PP GAPPP
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP----GAPPP 215
Query: 985 PPSQPP 990
P P
Sbjct: 216 HPQLYP 221
Score = 37.0 bits (84), Expect = 0.099
Identities = 48/206 (23%), Positives = 69/206 (33%), Gaps = 55/206 (26%)
Query: 850 PSQMIMPNVM-EMIAALGPGP--------SPYPLPP-------PP--------------G 879
P + P+ M + + L PGP SP+ LPP PP
Sbjct: 326 PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAA 385
Query: 880 GTNSNDYSSQGNNYQGHGNF-DFPHGNPGGTSMNDFMHGPPQLSHP------------PD 926
++S+ SS + + +PH P TS++ + PP+ + P P
Sbjct: 386 SSSSSSSSSSASPFPASQALPSYPHSFPPPTSLS-VSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSSDQPHPSI---------QQGLHVPHPSSQSGPPLH 977
P L +HP P G+ HP + QQ Q H
Sbjct: 445 PPPYGRLLANSNAHP-GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH 503
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPH 1003
H + PPPP P P + S H H
Sbjct: 504 HGNSGPPPPGAFP-HPLEGGSSHHAH 528
Score = 34.7 bits (78), Expect = 0.49
Identities = 39/139 (28%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
GP +PYP PP P T S+ S + +P G PP P
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGP--------PPYGKRAP 644
Query: 926 DMPNNMAALE---KPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSG--PPLHHSG 980
A KP S P T G P+ P+ G PP SG
Sbjct: 645 SPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Query: 981 AP--PPPPSQPPRQPPQAA 997
P PPPP+ P PP +A
Sbjct: 705 LPSLPPPPAAPASGPPLSA 723
Score = 32.7 bits (73), Expect = 1.9
Identities = 39/170 (22%), Positives = 52/170 (30%), Gaps = 34/170 (20%)
Query: 873 PLPPPPGG---TNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPN 929
P PPPP G NSN + P P T H P H
Sbjct: 442 PPPPPPYGRLLANSNAH---------------PGPFPPSTGAQSTAHPPVSTHHHHHQQQ 486
Query: 930 NMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQP 989
++ Q+ H G+S P P PHP H A P
Sbjct: 487 QQQQQQQ--QQQQQQQQQHHGNSGPPPPGA-----FPHPLEGGSSHHAHPYAMSPSLGSL 539
Query: 990 PRQPPQAAPSSHPHSDLTFN---------PSSALEGQAGAQGASDMPEPS 1030
PP A PHS ++++ SS+ + +QG+ PS
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPS 589
Score = 31.6 bits (70), Expect = 4.2
Identities = 41/189 (21%), Positives = 56/189 (29%), Gaps = 37/189 (19%)
Query: 878 PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKP 937
PG ++ SS G + + P P D P+ S P P
Sbjct: 138 PGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAP 197
Query: 938 LSHPMQETMPHAGSSDQPHPSIQQG---------------------LHVPHPSSQSGPP- 975
+ P + PHP + G + P+ Q PP
Sbjct: 198 MEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257
Query: 976 ----LHHSGAPPPPPSQPPRQP------PQA-APSSHPHSDLTFNPSSAL----EGQAGA 1020
+ SGA PP++PP P P A P++ PH P AL A
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 1021 QGASDMPEP 1029
G P P
Sbjct: 318 PGLGAQPLP 326
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 65.9 bits (159), Expect = 2e-10
Identities = 106/426 (24%), Positives = 158/426 (37%), Gaps = 83/426 (19%)
Query: 124 PMQPPLSSMSSMKPTLSHSDGS-------FPYD-SVPWQQNTNQPPGSLSVVTTVWGVTN 175
PM+ P SS SS S S S FP ++P ++ PP SLSV T
Sbjct: 370 PMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 176 TS-QSQVL-----------GNPMANANNPMNPGGNPMASG-MTTSNPGLNSPQFAGQQQQ 222
S SQ + G +AN+N +PG P ++G +T++P +++ QQQQ
Sbjct: 430 PSLPSQAVWSQGPPPPPPYGRLLANSN--AHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQ 487
Query: 223 FSAKAGPAQPYIQQSMYGRPNYPGSGGF------GASYPGGPNA--PAGMGIPPHTRPPA 274
+ Q QQ +G P G F G+S+ P A P+ + P+ PA
Sbjct: 488 QQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPA 547
Query: 275 DFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP 334
P + + + ++++ ++ + Q Y P+ + Q P
Sbjct: 548 HLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQ-------GSYPCSHPSPSQGPQGAPYP 600
Query: 335 GPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQ------Q 388
P P S +++ A + S P G PPG P+ G+R P
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASS-----PAGYKTASPPGPPPY---GKRAPSPGAYKTA 652
Query: 389 TYPGPRPQSLPIQNIKRPYPGEPNY--GNQQYGPNSQFPTQPGQYPAPNPPR-PLTSPNY 445
T PG +P S P P P Y + GP + P P P P PP P P+
Sbjct: 653 TPPGYKPGSPPSFRTGTP----PGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSL 708
Query: 446 PGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVA 505
P P+ P+SG PP + + E++ P PVP A
Sbjct: 709 PPP--PAAPASG--PPLSATQIKQEPAEEY--------------------ETPESPVPPA 744
Query: 506 NYPHSP 511
P P
Sbjct: 745 RSPSPP 750
Score = 61.2 bits (147), Expect = 5e-09
Identities = 94/423 (22%), Positives = 141/423 (33%), Gaps = 72/423 (17%)
Query: 161 PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQ 220
P + T V G S P N P P P+ + + S PGL + G
Sbjct: 271 PPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPL-NNASASPPGLGAQPLPGHL 329
Query: 221 QQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPA 280
P+ G G G P GP + PH+ PPA + PA
Sbjct: 330 PS-------------------PHAMGQGMGGL--PPGPEKGPTLAPSPHSLPPASSSAPA 368
Query: 281 --------AAAAAAAVAAAAATATATATATVAALQ---------------ETQNKDINQY 317
++++++A A++++++++++ + A Q N+
Sbjct: 369 PPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYT 428
Query: 318 GPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISP 377
P P+QA SQ P P G + +P G P G P +S
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHP----------GPFPPSTGAQSTAHPPVST 478
Query: 378 FGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPP 437
H Q+ QQ Q ++ + ++GN P FP P + + +
Sbjct: 479 HHHHHQQQQQQQQ----------QQQQQQQQQQQHHGNSGPPPPGAFP-HPLEGGSSHHA 527
Query: 438 RPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNV-- 495
P G P P PPP + Y NG + S +S S+ SQG+
Sbjct: 528 HPYAMSPSLGSLRPYPPGPAHLPPPHSQVS--YSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 496 --NRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPP 553
P + A YP PVP T T + I S K PP P P
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645
Query: 554 PPA 556
P A
Sbjct: 646 PGA 648
Score = 57.0 bits (136), Expect = 9e-08
Identities = 115/459 (25%), Positives = 142/459 (30%), Gaps = 100/459 (21%)
Query: 119 PPGKLPMQPPLS--SMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNT 176
PP P QP S S+ PT H+ P S +Q PP + G
Sbjct: 171 PPDSTPRQPEASFEPHPSVTPTGYHAPME-PPTSRMFQAPPGAPPPHPQLYPGGTG---- 225
Query: 177 SQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQ 236
VL P PM P G AS + N G P P P
Sbjct: 226 ---GVLSGP------PMGPKGGGAASSVGGPNGGKQHPP-------------PTTPISVS 263
Query: 237 SMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATAT 296
S SG GA P P G G P PPA+F P A
Sbjct: 264 S---------SGASGAPPTKPPTTPVGGGNLPSAPPPANF--PHVTPNLPPPPALRPLNN 312
Query: 297 ATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMT 356
A+A+ Q P + M Q MGG +
Sbjct: 313 ASASPPGLGAQPL------------PGHLPSPHAMGQ-------GMGGLPPGPEKGPTLA 353
Query: 357 PSGMSGPPMGMNQPRPPGISPF----------GTHGQRMPQQTYPGPRPQSLPIQNIKRP 406
PS S PP + P PP P+ + P P Q+LP P
Sbjct: 354 PSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFP 413
Query: 407 YPGEPNYGNQQYGPNSQFPTQPGQY-----PAPNPP--RPLTSPN-YPGQRMPSQPSSGQ 458
P + NQ P P+ P Q P P PP R L + N +PG PS +
Sbjct: 414 PPTSLSVSNQP--PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQST 471
Query: 459 YPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTP 518
PP V+ ++ +Q Q GN PP PG
Sbjct: 472 AHPP-VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP-------------PGAFPH 517
Query: 519 PMTPGSS--IPPY-LSPSQDVKPPFPPDIKPNMSALPPP 554
P+ GSS PY +SPS P+P P + LPPP
Sbjct: 518 PLEGGSSHHAHPYAMSPSLGSLRPYP----PGPAHLPPP 552
Score = 53.1 bits (126), Expect = 1e-06
Identities = 86/413 (20%), Positives = 135/413 (32%), Gaps = 75/413 (18%)
Query: 192 PMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFG 251
P +P G + ++ G + P+ Q + ++ S+Y +
Sbjct: 99 PQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSP----------SIYSPGSVENDSDSS 148
Query: 252 ASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQN 311
+ GP P PP PP+ QP + A+ + T T A ++ +
Sbjct: 149 SGLSQGPARPYH---PPPLFPPSP--QPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 312 KDIN----------QYGPMGPTQAYNSQFMNQPGPRGPASMGGSMN-----PASMAAGMT 356
+ Q P G + M G +S+GG P + ++
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVS 263
Query: 357 PSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQ 416
SG SG P P P +P G G +P P P P N+ P P
Sbjct: 264 SSGASGAP-----PTKPPTTPVG--GGNLPSAPPPANFPHVTP--NLPPPPALRPLNNAS 314
Query: 417 QYGPNSQFPTQPGQYPAPN---------PPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMG 467
P PG P+P+ PP P P P+S P P +
Sbjct: 315 ASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF- 373
Query: 468 QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNP----------T 517
+ +++ + SS S+ S + + P + +YPHS P T
Sbjct: 374 -----PYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYT 428
Query: 518 PPMTPGSSI--------PPY---LSPSQDVKPPFPPDIKPNMSALPPPPANHN 559
P P ++ PPY L+ S PFPP +A PP +H+
Sbjct: 429 QPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Score = 41.2 bits (95), Expect = 0.005
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 906 PGGTSMNDFMHGPPQLSHPPDMP--NNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGL 963
P +F H P L PP + NN +A S P P G PH ++ QG+
Sbjct: 286 PSAPPPANFPHVTPNLPPPPALRPLNNASA-----SPPGLGAQPLPGHLPSPH-AMGQGM 339
Query: 964 HVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGA 1023
P + GP L S PP S PP P S S S+A + + +
Sbjct: 340 GGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSS-----SAAASSSSSSSSS 394
Query: 1024 SDMPEPSLDLLP 1035
S P P+ LP
Sbjct: 395 SASPFPASQALP 406
Score = 38.1 bits (87), Expect = 0.045
Identities = 42/177 (23%), Positives = 59/177 (33%), Gaps = 25/177 (14%)
Query: 869 PSPYPLPPP-------PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQL 921
P P LPPP G N SS N+ +P +P + GP
Sbjct: 544 PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQ------GPQGA 597
Query: 922 SHP----PDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLH 977
+P P + + A L ++ + +S P + P + PP +
Sbjct: 598 PYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGY 657
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEG-----QAGAQGASDMPEP 1029
G+PP S PP +S P TF P S G AG G +P P
Sbjct: 658 KPGSPP---SFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPP 711
Score = 37.7 bits (86), Expect = 0.058
Identities = 66/272 (24%), Positives = 91/272 (33%), Gaps = 40/272 (14%)
Query: 321 GPTQAYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGT 380
GP + S+ PG +S G + A + P Q R IS +
Sbjct: 22 GPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTPKVNKQGRSEEISESES 81
Query: 381 HGQRMPQQTYPG---PRPQS------LPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPG-- 429
P++T PRPQS L +++ +P +Q S PG
Sbjct: 82 EETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSV 141
Query: 430 -----------QYPA-PNPPRPLTSPN-YPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFN 476
Q PA P P PL P+ P P QP + P P+V Y+ P +
Sbjct: 142 ENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPME-P 200
Query: 477 GQNNTFSGSS---------YSNYSQGNVNRPPRPVPVANYPHSPVPG-----NPTPPMTP 522
+ F Y + G ++ PP P S V G PP TP
Sbjct: 201 PTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMG-PKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 523 GSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
S S + KPP P N+ + PPP
Sbjct: 260 ISVSSSGASGAPPTKPPTTPVGGGNLPSAPPP 291
Score = 37.4 bits (85), Expect = 0.076
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 870 SPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPN 929
SP L G + ++D SS + P G+ ND LS P P
Sbjct: 101 SPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSPSIYSPGSVEND-SDSSSGLSQGPARPY 159
Query: 930 NMAALEKPLSHPMQETMPHAGSSDQPHPSI-QQGLHVP--HPSSQ--SGPPLHHSGAPPP 984
+ L P P T +S +PHPS+ G H P P+S+ PP GAPPP
Sbjct: 160 HPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP----GAPPP 215
Query: 985 PPSQPP 990
P P
Sbjct: 216 HPQLYP 221
Score = 37.0 bits (84), Expect = 0.099
Identities = 48/206 (23%), Positives = 69/206 (33%), Gaps = 55/206 (26%)
Query: 850 PSQMIMPNVM-EMIAALGPGP--------SPYPLPP-------PP--------------G 879
P + P+ M + + L PGP SP+ LPP PP
Sbjct: 326 PGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAA 385
Query: 880 GTNSNDYSSQGNNYQGHGNF-DFPHGNPGGTSMNDFMHGPPQLSHP------------PD 926
++S+ SS + + +PH P TS++ + PP+ + P P
Sbjct: 386 SSSSSSSSSSASPFPASQALPSYPHSFPPPTSLS-VSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSSDQPHPSI---------QQGLHVPHPSSQSGPPLH 977
P L +HP P G+ HP + QQ Q H
Sbjct: 445 PPPYGRLLANSNAHP-GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQH 503
Query: 978 HSGAPPPPPSQPPRQPPQAAPSSHPH 1003
H + PPPP P P + S H H
Sbjct: 504 HGNSGPPPPGAFP-HPLEGGSSHHAH 528
Score = 34.7 bits (78), Expect = 0.49
Identities = 39/139 (28%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
GP +PYP PP P T S+ S + +P G PP P
Sbjct: 593 GPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGP--------PPYGKRAP 644
Query: 926 DMPNNMAALE---KPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSG--PPLHHSG 980
A KP S P T G P+ P+ G PP SG
Sbjct: 645 SPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Query: 981 AP--PPPPSQPPRQPPQAA 997
P PPPP+ P PP +A
Sbjct: 705 LPSLPPPPAAPASGPPLSA 723
Score = 32.7 bits (73), Expect = 1.9
Identities = 39/170 (22%), Positives = 52/170 (30%), Gaps = 34/170 (20%)
Query: 873 PLPPPPGG---TNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPN 929
P PPPP G NSN + P P T H P H
Sbjct: 442 PPPPPPYGRLLANSNAH---------------PGPFPPSTGAQSTAHPPVSTHHHHHQQQ 486
Query: 930 NMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQP 989
++ Q+ H G+S P P PHP H A P
Sbjct: 487 QQQQQQQ--QQQQQQQQQHHGNSGPPPPGA-----FPHPLEGGSSHHAHPYAMSPSLGSL 539
Query: 990 PRQPPQAAPSSHPHSDLTFN---------PSSALEGQAGAQGASDMPEPS 1030
PP A PHS ++++ SS+ + +QG+ PS
Sbjct: 540 RPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPS 589
Score = 31.6 bits (70), Expect = 4.2
Identities = 41/189 (21%), Positives = 56/189 (29%), Gaps = 37/189 (19%)
Query: 878 PGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKP 937
PG ++ SS G + + P P D P+ S P P
Sbjct: 138 PGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAP 197
Query: 938 LSHPMQETMPHAGSSDQPHPSIQQG---------------------LHVPHPSSQSGPP- 975
+ P + PHP + G + P+ Q PP
Sbjct: 198 MEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPT 257
Query: 976 ----LHHSGAPPPPPSQPPRQP------PQA-APSSHPHSDLTFNPSSAL----EGQAGA 1020
+ SGA PP++PP P P A P++ PH P AL A
Sbjct: 258 TPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 1021 QGASDMPEP 1029
G P P
Sbjct: 318 PGLGAQPLP 326
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 65.9 bits (159), Expect = 2e-10
Identities = 62/224 (27%), Positives = 83/224 (37%), Gaps = 32/224 (14%)
Query: 339 PASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSL 398
PAS+G + PA+ P P N P PP + + Q P GP +S
Sbjct: 326 PASVGSTSGPATTPLASAPR----PAAPANNPPPPSLM---STTQSRPPWMNSGPS-ESR 377
Query: 399 PIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSG- 457
P + PG P G P +P P P +P Q P+ P
Sbjct: 378 PYHGMHGGGPGGPGGG-------------PHSFPHPLPSLTGGHGGHPMQHNPNGPPPPW 424
Query: 458 -QYPPPTVNMG-----QYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSP 511
Q PPP +N G + P +T GS QG PP P+ + P P
Sbjct: 425 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPP 484
Query: 512 VPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPP 555
G P PP P +PP+ Q +PP PP +M++ P P
Sbjct: 485 PSGQPPPP--PSGPLPPW--QQQQQQPPPPPPPSSSMASSTPLP 524
Score = 43.5 bits (101), Expect = 0.001
Identities = 51/178 (28%), Positives = 59/178 (33%), Gaps = 45/178 (25%)
Query: 864 ALGPGPS-PYPLPPPP---------------GGTNSNDYSSQ---GNNYQGHGNFDFPH- 903
A P P+ P PPPP G + S Y G G G FPH
Sbjct: 341 ASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHP 400
Query: 904 -----GNPGGTSMNDFMHGPPQ-LSHPPDMPNNMAALEKPLSH----PMQETMP------ 947
G GG M +GPP PP P N P H PM + +
Sbjct: 401 LPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGP--HPPGHHGPPPMDQYLGSTPVGS 458
Query: 948 -----HAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSS 1000
H G P P + G+ P P SG P P PP Q +QPP P S
Sbjct: 459 GVYRLHQGKGMMPPPPM--GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPS 514
Score = 38.9 bits (89), Expect = 0.026
Identities = 51/207 (24%), Positives = 71/207 (34%), Gaps = 26/207 (12%)
Query: 273 PADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMN 332
PA + A +A A A + + TQ++ + GP+++ M+
Sbjct: 326 PASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRP--PWMNSGPSESRPYHGMH 383
Query: 333 QPGPRGPASMGGSM-NPA-SMAAGMTPSGM----SGPPMGMNQPRPP----GISPFGTHG 382
GP GP S +P S+ G M +GPP QP PP G P G HG
Sbjct: 384 GGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHG 443
Query: 383 QRMPQQTYPGPRPQSLPIQNIKR-------------PYPGEPNYGNQQYGPNSQFPTQPG 429
P Y G P + + + P P P G P+ P
Sbjct: 444 PP-PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQ 502
Query: 430 QYPAPNPPRPLTSPNYPGQRMPSQPSS 456
Q P PP P +S +P Q S
Sbjct: 503 QQQQPPPPPPPSSSMASSTPLPWQQRS 529
Score = 38.5 bits (88), Expect = 0.034
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 428 PGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSY 487
P P + PRP N P PS S+ Q PP +N G + ++G + G
Sbjct: 335 PATTPLASAPRPAAPANNPPP--PSLMSTTQSRPPWMNSGPS-ESRPYHGMHGGGPGGP- 390
Query: 488 SNYSQGNVNRPPRPVPVANYPHS--PVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIK 545
G + P P+P H P+ NP P PP++ P PP
Sbjct: 391 ----GGGPHSFPHPLPSLTGGHGGHPMQHNPNGPP------PPWMQP--------PP--- 429
Query: 546 PNMSALPPPPANHN----DELRLTFPVRDGV 572
P M+ P PP +H D+ + PV GV
Sbjct: 430 PPMNQGPHPPGHHGPPPMDQYLGSTPVGSGV 460
Score = 36.2 bits (82), Expect = 0.17
Identities = 35/137 (25%), Positives = 41/137 (29%), Gaps = 11/137 (8%)
Query: 866 GPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPP 925
GP P+PLP GG + N P P MN H PP PP
Sbjct: 393 GPHSFPHPLPSLTGGHGGHPMQHNPNGPPP------PWMQPPPPPMNQGPH-PPGHHGPP 445
Query: 926 DMPNNMAALEKPLS----HPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGA 981
M + + H + MP P P P P S PP
Sbjct: 446 PMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQ 505
Query: 982 PPPPPSQPPRQPPQAAP 998
PPPP P + P
Sbjct: 506 QPPPPPPPSSSMASSTP 522
Score = 35.8 bits (81), Expect = 0.22
Identities = 34/117 (29%), Positives = 38/117 (32%), Gaps = 21/117 (17%)
Query: 947 PHAGSSDQPHPSIQ-QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSD 1005
P G PHP G H HP H+ PPPP QPP PP HP
Sbjct: 390 PGGGPHSFPHPLPSLTGGHGGHPMQ------HNPNGPPPPWMQPP--PPPMNQGPHPPGH 441
Query: 1006 LTFNPSSALEGQAGA--------QGASDMPEPSLDLLPELTNPDELLSYLDPPDLPS 1054
P G QG MP P + ++P P PP PS
Sbjct: 442 HGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS----GQPPPPPS 494
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 64.3 bits (155), Expect = 6e-10
Identities = 107/444 (24%), Positives = 139/444 (31%), Gaps = 118/444 (26%)
Query: 192 PMNPGGNPMASGMTT-SNPGLNSPQFAGQQQQFSAKAG-PAQPYIQ----QSMYGRPNYP 245
P P G P +G++ PG P A + F + G P P + + YG P P
Sbjct: 140 PPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRP 199
Query: 246 GSGGF-GASYPGGPNAPAGMGI--------------------------------PPHTRP 272
G G G P GP+ P G+G PP R
Sbjct: 200 GERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG 259
Query: 273 PADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMN 332
P +P AA A A GP GP
Sbjct: 260 PEGIGKPGAAGAPGQPGIPGTKGLPGAPGIA--------------GPPGPPGFGKPGLPG 305
Query: 333 QPGPRGPASMGGS------MNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMP 386
G RGPA + G PA + G++GPP M P GI G+HG P
Sbjct: 306 LKGERGPAGLPGGPGAKGEQGPAGLPG---KPGLTGPPGNMGPQGPKGIP--GSHGLPGP 360
Query: 387 QQT--------YPGPRPQ-SLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQP----GQYPA 433
+ YPG + + P + K YPG+P + P P G
Sbjct: 361 KGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGL 420
Query: 434 PNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQG 493
P P P + PG + P P T P G F GS S G
Sbjct: 421 PGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGP---IGPPGIPG----FPGSKGDPGSPG 473
Query: 494 NVNRPPRPVPVA----NYPHSP--------------VPGNPTPPMTPGSSIPP--YLSPS 533
PP P +A N P P +PG P PP PG ++ P ++
Sbjct: 474 ----PPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAG 529
Query: 534 QDVKPPFPPDIKPNMSALPPPPAN 557
Q +P++S P AN
Sbjct: 530 Q----------RPSLSGTPLVSAN 543
Score = 51.2 bits (121), Expect = 5e-06
Identities = 75/281 (26%), Positives = 94/281 (33%), Gaps = 54/281 (19%)
Query: 318 GPMGPT--QAYNSQFMNQ----PGPRGPASMG-----------GSMNPASMAAGMTPSGM 360
GP GP Y S + PGP GP+++G G P + P+G+
Sbjct: 75 GPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGL 134
Query: 361 ---SGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPR-------PQSLPIQNIKRPYPGE 410
GPP P P GIS G GQ+ P PGPR +P N ++ GE
Sbjct: 135 PGPRGPPGPPGIPGPAGISVPGKPGQQGPTGA-PGPRGFPGEKGAPGVPGMNGQK---GE 190
Query: 411 PNYG-----NQQYGPNSQFPTQP---------GQYPAPNPPRPLTSPNYPGQRMPSQPSS 456
YG ++ P Q PT P G+ P P +PG+ P P
Sbjct: 191 MGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPPG 250
Query: 457 GQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNP 516
Q PP KP +G+ G P P +A P P G P
Sbjct: 251 PQGPPGERGPEGIGKPGA--------AGAPGQPGIPGTKGLPGAP-GIAGPPGPPGFGKP 301
Query: 517 TPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPAN 557
P G P L K P P L PP N
Sbjct: 302 GLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGN 342
Score = 42.0 bits (97), Expect = 0.003
Identities = 59/227 (25%), Positives = 77/227 (33%), Gaps = 39/227 (17%)
Query: 837 PDGIPSKRFKTMSPSQMIMPNVMEMIAALG-PGPSPYPLPPPPGGTNS--NDYSSQGNN- 892
P G+P K T P M + + G PGP P P G + S G++
Sbjct: 327 PAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDG 386
Query: 893 ---YQGHGNFDFPHGNPG--GTSMNDFMHGPPQLSHP---------------------PD 926
Y G D P GNPG G + + GPP L P P
Sbjct: 387 KPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPG 446
Query: 927 MPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGP--PLHHSGAPP- 983
+P + P + GS P P+ + P+ GP P HSG P
Sbjct: 447 IPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGL 506
Query: 984 PPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQ---AGAQGASDMP 1027
P P PP P QA P + +L G + QG + MP
Sbjct: 507 PGPPGPPGPPGQAV---MPEGFIKAGQRPSLSGTPLVSANQGVTGMP 550
Score = 38.9 bits (89), Expect = 0.026
Identities = 66/256 (25%), Positives = 88/256 (34%), Gaps = 49/256 (19%)
Query: 334 PGPRGPASMGGSMNPASM-------AAGMT-PSGMSGP--PMGMNQPRPPGI-------S 376
PGP GPA G P+ + G+ G+ GP P + +P PG+
Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERG 121
Query: 377 PFGTHGQRMPQQTYPGPRPQSLPIQNIKRP----YPGEPNYGNQQYGPNSQFPTQ--PGQ 430
P+G G P PGPR P I P PG+P Q GP + PG+
Sbjct: 122 PYGPKGDVGP-AGLPGPRGPPGP-PGIPGPAGISVPGKPG----QQGPTGAPGPRGFPGE 175
Query: 431 YPAPNPP--------RPLTSPNYPGQR---MPSQPSSGQYPPPTVNMGQYYKPEQFNGQN 479
AP P +P PG+R P P+ PP G+ P Q +
Sbjct: 176 KGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGENGVPGQPGIKG 235
Query: 480 NTFSGSSYSNYSQGNVNRPP---RPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDV 536
+ PP P + + PG P P T G P ++
Sbjct: 236 DRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIA----- 290
Query: 537 KPPFPPDI-KPNMSAL 551
PP PP KP + L
Sbjct: 291 GPPGPPGFGKPGLPGL 306
Score = 33.5 bits (75), Expect = 1.1
Identities = 45/180 (25%), Positives = 58/180 (32%), Gaps = 39/180 (21%)
Query: 851 SQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTS 910
+Q +P ++ G P PP P G +GH P G PG S
Sbjct: 40 TQFFIPYTIKSKGIAVRGEQGTPGPPGPAGP------------RGHPGPSGPPGKPGYGS 87
Query: 911 MNDFMHGPPQLSHPPDMPNNMAALEKP----LSHPMQETMPHAGSSDQPHPSIQQGLHVP 966
+ G P L PP +A+ KP L E P+ D + P
Sbjct: 88 PG--LQGEPGLPGPP----GPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGL------P 135
Query: 967 HPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDM 1026
P GPP G P P P +P Q P+ P G+ GA G M
Sbjct: 136 GPRGPPGPP----GIPGPAGISVPGKPGQQGPTGAP-------GPRGFPGEKGAPGVPGM 184
Score = 30.4 bits (67), Expect = 9.3
Identities = 19/73 (26%), Positives = 26/73 (35%)
Query: 955 PHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSAL 1014
P+ +G+ V GPP P PS PP +P +P L P +
Sbjct: 45 PYTIKSKGIAVRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSA 104
Query: 1015 EGQAGAQGASDMP 1027
G+ G G P
Sbjct: 105 VGKPGVPGLPGKP 117
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 63.9 bits (154), Expect = 8e-10
Identities = 97/418 (23%), Positives = 138/418 (33%), Gaps = 43/418 (10%)
Query: 173 VTNTSQSQVLGNPMANANNPMNPGG--NPMASGMTTSNPGLNSPQFAGQQQQFS--AKAG 228
V++ S+ A P GG P + +++S L+SP +G + + A A
Sbjct: 200 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 259
Query: 229 PAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTRPPADFTQPAAAAAAAAV 288
P+QP + RP A+ GP + + + P + PP+ P+ +
Sbjct: 260 PSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPP 319
Query: 289 AAAAATATA-----TATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQPGPRGPASMG 343
A + AT T AT + L + P P P P +
Sbjct: 320 ATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLS 379
Query: 344 GSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQR--MPQQTYPGPRPQSLPIQ 401
P+ A + P P PP +PF P T P P SL
Sbjct: 380 PLATPSPQAPNALAVHLLQAPFSP-PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438
Query: 402 NIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPP 461
++ P P + P P P P P PL +P + P Q P
Sbjct: 439 PLQVPP-----------SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP 487
Query: 462 PTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMT 521
P + P F GQ FS S+ S PP+ PV P VP P+PP +
Sbjct: 488 PLQALPS--PPASFPGQ-APFSPSASLPMSP-LATPPPQAPPVLAAPLLQVP--PSPPAS 541
Query: 522 P---GSSIPPYLSPSQDVK-----------PPFPPDIKPNMSALPPPPANHNDELRLT 565
P PP P V PP PP P+ + P A H+ T
Sbjct: 542 PTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 599
Score = 58.2 bits (139), Expect = 4e-08
Identities = 71/285 (24%), Positives = 91/285 (31%), Gaps = 63/285 (22%)
Query: 318 GPMGPTQAYNSQFMNQPGP---RGPASMGGSMNPASMAAGMTPSGMSGP----------- 363
GP + + +P P R P++ GG PAS + + + +S P
Sbjct: 195 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP 254
Query: 364 --PMGMNQPRPPGI------------------------SPFGTHGQRMPQQTYPGPRPQS 397
P +QP+P G+ SP T P P Q+
Sbjct: 255 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQT 314
Query: 398 LPIQNIKRPYPGEPNYGNQQYGPNSQF----PTQPGQYPAPNPPRPLTSPNYPGQRMPSQ 453
LP P + G+ F P P P P P L P P Q PS
Sbjct: 315 LPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP--PLQAPPSP 372
Query: 454 PSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVP 513
P+S P Q + FS P P P P SP
Sbjct: 373 PASPPLSPLATPSPQAPNALAVHLLQAPFS---------------PPPSPPVQAPFSPPA 417
Query: 514 GNP-TPPMTPGSSIPPYLSPSQDVKPPFPPDIKP-NMSALPPPPA 556
P +P TP S PP L+ PP PP P + SA PPP A
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Score = 43.1 bits (100), Expect = 0.001
Identities = 60/216 (27%), Positives = 77/216 (35%), Gaps = 37/216 (17%)
Query: 840 IPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNF 899
+ S T SPS P+ + L PSP P PP T S
Sbjct: 290 LSSSPLATPSPSAPPSPSAPPSLQTL---PSP-PATPPSQATTSL--------------- 330
Query: 900 DFPHGNPGGTSMNDFMHGPP--QLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHP 957
G+P + + F+ PP L+ PP P AL P P+Q A S P
Sbjct: 331 ----GSPTLQATHSFLPSPPLSPLATPP--PQAPPALALP---PLQ-----APPSPPASP 376
Query: 958 SIQQGLHVPHPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQ 1017
+ L P P + + +H AP PP PP Q P + P+S P S PS A
Sbjct: 377 PLSP-LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL 435
Query: 1018 AGAQ-GASDMPEPSLDLLPELTNPDELLSYLDPPDL 1052
A P S + P T P + L P L
Sbjct: 436 AAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 471
Score = 37.4 bits (85), Expect = 0.076
Identities = 58/234 (24%), Positives = 71/234 (30%), Gaps = 25/234 (10%)
Query: 837 PDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSP---YPLPPP--PGGTNSNDYSSQGN 891
P P T SP V + A P PSP P PP P + S SQ
Sbjct: 373 PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 432
Query: 892 NYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGS 951
P P M+ PPQ P P A P + P T P
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 492
Query: 952 SDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPP--------PPSQPPRQPPQAAPSSHPH 1003
P Q P S P+ PPP P Q P PP + P
Sbjct: 493 PSPPASFPGQAPFSPSASL----PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Query: 1004 SDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNSN 1057
T P +++ G + P P P +P LS PDL +S+
Sbjct: 549 RPPTPGPDTSVSGPRLTLALAPGPPP-----PPSRSPSSTLS---GPDLAGHSS 594
Score = 37.0 bits (84), Expect = 0.099
Identities = 71/317 (22%), Positives = 99/317 (31%), Gaps = 53/317 (16%)
Query: 267 PPHTRPPADFTQPAAAAAAAAVAAAAATATATATATV--AALQETQNKDINQYGPMGPTQ 324
P RPP T PAA A A A + A + E+ + GPT+
Sbjct: 30 PGSPRPPPPVT-PAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPR-------AGPTR 81
Query: 325 AYNSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQR 384
R PAS G P + P G G +P P G G R
Sbjct: 82 T----------SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP-----GPLGQKGLR 126
Query: 385 MPQQ-------TYPGPRPQSLPI---QNIKRPYPGEPNYG----NQQYGPNSQFPTQPGQ 430
+ + P+ +L ++ P PG P+ ++ G P +P
Sbjct: 127 ISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLP-RPAP 185
Query: 431 YPAPNPPR--PLTSPNYPGQRMPSQPSSGQYPPPTVNMG-QYYKPEQFNGQNNTFSGSSY 487
P PP P S + + ++PS P+ G Q + S +
Sbjct: 186 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245
Query: 488 SNYSQGNVNR----PPRPVP----VANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPP 539
S S R P +P P P P P S P +PS P
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPP- 304
Query: 540 FPPDIKPNMSALPPPPA 556
P P++ LP PPA
Sbjct: 305 -SPSAPPSLQTLPSPPA 320
Score = 36.6 bits (83), Expect = 0.13
Identities = 35/120 (29%), Positives = 47/120 (39%), Gaps = 15/120 (12%)
Query: 919 PQLSHPPDMPNNMAA--LEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPL 976
P + PP P +AA L+ P S P T+ P P +S SGP L
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPD----------TSVSGPRL 564
Query: 977 HHSGAP--PPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQ-GASDMPEPSLDL 1033
+ AP PPPPS+ P + S T P +G + GA+ P P +L
Sbjct: 565 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 624
Score = 33.5 bits (75), Expect = 1.1
Identities = 45/170 (26%), Positives = 60/170 (35%), Gaps = 51/170 (30%)
Query: 864 ALGPGPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSH 923
AL PGP PPPP + S+ S G + GH + TS + + G
Sbjct: 567 ALAPGP-----PPPPSRSPSSTLS--GPDLAGHSS--------SATSTPEELRG------ 605
Query: 924 PPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQS---GPPLHHSG 980
++ P G++ P P + L HP++ S PPL G
Sbjct: 606 -------------------YDSGPEGGAAASPPPDAE--LAACHPAAWSRGPAPPLAFRG 644
Query: 981 APPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPS 1030
AP P PP P +A T + E A GA D P PS
Sbjct: 645 APGAPLPWPPATGPGSADGL-----CTIYETEGPESATPAPGALD-PGPS 688
Score = 32.7 bits (73), Expect = 1.9
Identities = 37/128 (28%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Query: 928 PNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVP-HPSSQSGPPLHHSGAPPPPP 986
P+ L++P S + + S + PS + P HPS L A PP
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ---ALRPPQ 275
Query: 987 SQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPE--LTNPDELL 1044
PPR+ AAP+ P S SS L + + S PSL LP T P +
Sbjct: 276 VTPPRK--DAAPALGPLS------SSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQAT 327
Query: 1045 SYLDPPDL 1052
+ L P L
Sbjct: 328 TSLGSPTL 335
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 63.9 bits (154), Expect = 8e-10
Identities = 135/582 (23%), Positives = 180/582 (30%), Gaps = 148/582 (25%)
Query: 120 PGKLPMQPP----LSSMSSMKPTLSHSDGSFPYDSV-------PWQQNTN----QPPGSL 164
PG LP QP L+ M++ K + FP ++ P T QPPG+L
Sbjct: 384 PGALPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQANVFKQPPATTTGAAPPQPPGAL 443
Query: 165 SVVTTVWGVTNTSQSQVLGNPMANANN-------------------PMNPGGN------P 199
S +V + S + M N P N GG P
Sbjct: 444 SKPMSVHLLNQGSSIVIPAQHMLPGQNQFLLPGAPAVQLPQQLSALPANVGGQILAAAAP 503
Query: 200 MASGMTTSNPGLNSPQFAGQQQQ---FSAKAGPAQPYI---------QQSMYGRPNYPGS 247
G +NP L + AG + +G +I Q +++ P +
Sbjct: 504 HTGGQLIANPILTNQNLAGPLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQMPVSLAA 563
Query: 248 GGFGASYPGGPNAPA------GMGIPPHT----RPPADFTQPAAAAAAAAVAAAAATAT- 296
G P PA G+ +PP P QPA AAA AA T
Sbjct: 564 GSLPTQSQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLVQPATPAAATGEAAPVLTVQP 623
Query: 297 ------ATATATVAALQETQNKDINQYGPMGPT-QAYNSQFMNQPGPRGPASMGGSMNPA 349
A +T LQ+ Q Q P PT QA P P S G + +P
Sbjct: 624 APQAPPAVSTPLPLGLQQPQA----QQPPQAPTPQAAAPPQATTPQP----SPGLASSPE 675
Query: 350 SMAAGMTPSG--------------------------------------MSGPPMGMNQ-P 370
+ G PS +S PP + P
Sbjct: 676 KIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAP 735
Query: 371 RPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGE-PNYGNQQYGPNSQFPTQPG 429
P G Q Q P P PQ +K P P P+ +Q P P P
Sbjct: 736 ATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQ--APLGDSPHLPS 793
Query: 430 QYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSN 489
+P P RP + P R PS+P PPP P F QN SN
Sbjct: 794 PHPTRPPSRPPSRPQSVS-RPPSEPPLHPCPPP---QAPPTLPGIFVIQNQLGVPPPASN 849
Query: 490 YSQGNVNRPPRPV-PVANYPHSPVPGNP-TPPMTPGSSI--------------------- 526
+ P P+ P + P P+P P PP + S++
Sbjct: 850 PAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQ 909
Query: 527 -PPYLSPSQDVKPPFPPDIKPNMSALPPPPANHNDELRLTFP 567
PP P + PP + P +A PPPP + FP
Sbjct: 910 FPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFP 951
Score = 50.8 bits (120), Expect = 7e-06
Identities = 112/493 (22%), Positives = 160/493 (32%), Gaps = 107/493 (21%)
Query: 172 GVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQQQFSAKAGPAQ 231
GV Q+ P A A + G P A P + AG+ Q +G
Sbjct: 357 GVLPPKLYQLTPKPFAPAGATLTIQGEPGALPQQPKAPQNLTFMAAGKAGQNVVLSGFPA 416
Query: 232 PYIQQSMYGRPNYPGSGGFGASYPGGPNAP---------AGMGIPPHTRPPA--DFTQPA 280
P +Q +++ +P +G PG + P + + IP P F P
Sbjct: 417 PALQANVFKQPPATTTGAAPPQPPGALSKPMSVHLLNQGSSIVIPAQHMLPGQNQFLLPG 476
Query: 281 AAAAAAAVAAAAATATATATATVAALQETQNKDI--------NQYGP--MGPTQAYNS-- 328
A A +A A AA T + I N GP +GP A +S
Sbjct: 477 APAVQLPQQLSALPANVGGQILAAAAPHTGGQLIANPILTNQNLAGPLSLGPVLAPHSGA 536
Query: 329 ------------------------------QFMNQPGPRGPAS----MGGSMNPASMAAG 354
+QP P GPA+ G ++ P+++A
Sbjct: 537 HSAHILSAAPIQVGQPALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQGVTLPPSAVAML 596
Query: 355 MTPSGMSGP-----------PMGMNQP---RPPGISPFGTHGQRMPQQTYP--GPRPQSL 398
TP G+ P P+ QP PP +S G + PQ P P PQ+
Sbjct: 597 NTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAA 656
Query: 399 --PIQNIKRPYPGEPN------YGNQQYGPNSQFPTQPGQ---YPAPNPPRPLTSP---- 443
P +P PG + G + TQ P +PL++
Sbjct: 657 APPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHL 716
Query: 444 NYPGQRMPSQPSSGQYPPPT--VNMGQYYKPEQFNGQNNTFSG----SSYSNYSQGNVNR 497
+ P + S P Q P P V G P+ + Q + ++ G +
Sbjct: 717 SVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSS 776
Query: 498 P--PRPVPVANYPHSPVPGNPTPPMTPGS-----SIPPYLSPSQDVKPPFPPDIKP---- 546
P P P+ + PH P P PP P S S PP P PP P P
Sbjct: 777 PSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFV 836
Query: 547 --NMSALPPPPAN 557
N +PPP +N
Sbjct: 837 IQNQLGVPPPASN 849
Score = 45.1 bits (105), Expect = 4e-04
Identities = 51/182 (28%), Positives = 67/182 (36%), Gaps = 36/182 (19%)
Query: 863 AALGP-------GPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFM 915
A LGP P+P P P SS + PH P G D
Sbjct: 743 AGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPS---------LPHQAPLG----DSP 789
Query: 916 HGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPS------IQQGLHVPHPS 969
H P HP P+ + + +S P E H Q P+ IQ L VP P+
Sbjct: 790 HLPSP--HPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPA 847
Query: 970 SQSGPPLHHSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQA-GAQGASDMPE 1028
S P + PP PP +P QPP+ PH PSS A ++ +S +P
Sbjct: 848 SNPAPT---APGPPQPPLRPQSQPPEGPLPPAPH----LPPSSTSSAVASSSETSSRLPA 900
Query: 1029 PS 1030
P+
Sbjct: 901 PT 902
Score = 35.8 bits (81), Expect = 0.22
Identities = 48/159 (30%), Positives = 55/159 (34%), Gaps = 29/159 (18%)
Query: 902 PHGNPGGTSMNDFMHGPPQ-----LSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPH 956
P NP T+ GPPQ S PP+ P A P S SS P
Sbjct: 846 PASNPAPTAP-----GPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPA 900
Query: 957 PSIQ---------QGLHVPHPSSQSGPPLHHSGAPPPPPSQPPR------QPPQAAPSSH 1001
P+ QG PH S P LH P PP PPR P A P
Sbjct: 901 PTPSDFQLQFPPSQG---PHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPK 957
Query: 1002 PHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNP 1040
+ S + Q A GA P+ S L P LT+P
Sbjct: 958 ALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGP-LTSP 995
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 63.2 bits (152), Expect = 1e-09
Identities = 96/392 (24%), Positives = 123/392 (31%), Gaps = 84/392 (21%)
Query: 195 PGGNPMAS---GMTTSNPGLNSPQFAGQ------QQQFSAKAGPAQPYIQQSMYGRPNYP 245
PG PM+ G +P P Q Q QF P P Q G P +
Sbjct: 589 PGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFR----PPGPQGQMGPQGPPLHQ 644
Query: 246 GSGGFGASYPGGPNAPAGMGIPPHTRP-PADFTQPAAAAAAAAVAAAAATATATATATVA 304
G GG P G P G PP P P D P
Sbjct: 645 GGGG-----PQGFMGPQGPQGPPQGLPRPQDMHGP------------------------- 674
Query: 305 ALQETQNKDINQYGPMGPTQAYNSQFMNQP----GPRGPASMGGSMNPASMAAGMTPSGM 360
+ + +GP+GP Q + P GP+GP G + P G
Sbjct: 675 ---QGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGP 731
Query: 361 SGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGP 420
GPP PPG P G G P GP Q I+ P P G G
Sbjct: 732 QGPPGTQGMQGPPG--PRGMQGPPHPHGIQGGPGS-----QGIQGPVSQGPLMGLNPRGM 784
Query: 421 NSQFPTQPGQYPAP------NPPRPLTSPNYPG---------QRMPSQPSSGQYPPPTVN 465
+ Q PAP +PP+ + P+ PG R P + Q PPP +
Sbjct: 785 QGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGS 844
Query: 466 MGQYYKPEQFNGQNNTFS-----GSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPM 520
M P++ G + S S QG + PP P N P P P
Sbjct: 845 M--LGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPF 902
Query: 521 ----TPGSSIPPYLSPSQDVKPPFPPDIKPNM 548
TP P +Q+ + PP + P +
Sbjct: 903 QQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGL 934
Score = 53.5 bits (127), Expect = 1e-06
Identities = 89/364 (24%), Positives = 111/364 (30%), Gaps = 57/364 (15%)
Query: 119 PPGKLPMQPPLSSMSSMKPTLSHSDGSFPYDSVPWQQNTNQPPGSLSVVTTVWGVTNTSQ 178
P G+ P M P L H G P + Q PP L + G +
Sbjct: 622 PQGQFRPPGPQGQMGPQGPPL-HQGGGGPQGFMG-PQGPQGPPQGLPRPQDMHGPQGMQR 679
Query: 179 SQVLGNPMANANNPMNPGGNPMASGMTTSNP-GLNSPQFAGQQQQFSAKAGPAQPYIQQS 237
+ P+ P G P G +S P G PQ Q GP P Q
Sbjct: 680 HP-------GPHGPLGPQGPPGPQG--SSGPQGHMGPQGPPGPQGHIGPQGPPGP---QG 727
Query: 238 MYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHTR-----PPADFTQ------PAAAAAAA 286
G PG+ G GP P GM PPH P + Q P
Sbjct: 728 HLGPQGPPGTQGMQ-----GPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPR 782
Query: 287 AVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQP----GPRGPASM 342
+ A + +++ P G + Q M P G +GP
Sbjct: 783 GMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQ 842
Query: 343 GGSMNPASMAAGMTPS-GMSGPPMGMNQPRPPG--ISPFGTHGQRMPQQTYPGPRPQSLP 399
G + P G S GPP G P P G P G GQ+ P + P P +P
Sbjct: 843 GSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARG-PHPSQGPIP 901
Query: 400 IQNIKRPYPGEP-----NYGNQQYGPNSQFP-------------TQPGQYPAPNPPRPLT 441
Q K P G+ N Q GP P PGQ P PN
Sbjct: 902 FQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRG 961
Query: 442 SPNY 445
PN+
Sbjct: 962 PPNH 965
Score = 45.4 bits (106), Expect = 3e-04
Identities = 52/187 (27%), Positives = 63/187 (33%), Gaps = 30/187 (16%)
Query: 845 FKTMSPSQMIMPNVMEMIAALGPGPSPYPLPPPPGGT---NSNDYSSQGNNYQGHGNFDF 901
F+ PSQ + N+ +M PGP PP P G G QG
Sbjct: 601 FQQPHPSQQMPMNMAQMGP---PGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQG 657
Query: 902 PHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQ 961
P G P G MHGP + P + P H G P P Q
Sbjct: 658 PQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGP---Q 714
Query: 962 GLHVPHPSSQSGP-PLHHSGAPPPPPSQPPRQPP-----QAAPSSHPHSDLTFNPSSALE 1015
G H Q P P H G PP +Q + PP Q P HPH ++
Sbjct: 715 G----HIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPP--HPH---------GIQ 759
Query: 1016 GQAGAQG 1022
G G+QG
Sbjct: 760 GGPGSQG 766
Score = 42.0 bits (97), Expect = 0.003
Identities = 64/233 (27%), Positives = 75/233 (32%), Gaps = 48/233 (20%)
Query: 837 PDGIPSKRFKTMSPSQMIMPNVMEMIAALGPGPSPYPLPP--PPGGTNSNDYSSQGNNYQ 894
P G+P P M P M+ PGP PL P PPG S+ Q
Sbjct: 662 PQGLPR-------PQDMHGPQGMQR----HPGPHG-PLGPQGPPGPQGSS-------GPQ 702
Query: 895 GHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQ 954
GH P G PG H PQ PP ++ P + MQ G
Sbjct: 703 GHMG---PQGPPGPQG-----HIGPQ--GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGP 752
Query: 955 PHP-SIQ-----QGLHVP---------HPSSQSGPPLHHSGAPPPPPSQPPRQPPQAAPS 999
PHP IQ QG+ P +P GPP P P PPQ
Sbjct: 753 PHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRG 812
Query: 1000 SHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLP--ELTNPDELLSYLDPP 1050
HP L + + G +G P L P EL P S PP
Sbjct: 813 PHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPP 865
Score = 37.4 bits (85), Expect = 0.076
Identities = 41/154 (26%), Positives = 48/154 (31%), Gaps = 20/154 (12%)
Query: 867 PGPSPYPLPPPPGGTNSNDYSS-----------QGNNYQGHGNFDFPHGNPGGTSMNDFM 915
PGP PP P G S G N +G P N G M
Sbjct: 744 PGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIM 803
Query: 916 HGPPQLSHPPDMPNNMAA-----LEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSS 970
PPQ P P + + P + P GS P ++ P S
Sbjct: 804 GHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGP---PGSQS 860
Query: 971 QSGPPLHHSGAPPPPPSQ-PPRQPPQAAPSSHPH 1003
Q GPP G PP Q PP Q P+ PH
Sbjct: 861 QQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPH 894
Score = 36.2 bits (82), Expect = 0.17
Identities = 38/136 (27%), Positives = 43/136 (31%), Gaps = 32/136 (23%)
Query: 902 PHGNPGGTSMNDFMHGPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQ 961
P PG M+ G Q MP NMA + P G Q P Q
Sbjct: 585 PQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPP------------GPQGQFRPPGPQ 632
Query: 962 GLHVPHPSSQSGPPLHHSGAPPP--PPSQPPRQPPQAAPSSH-------------PHSDL 1006
G P GPPLH G P Q P+ PPQ P PH L
Sbjct: 633 GQMGP-----QGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRHPGPHGPL 687
Query: 1007 TFNPSSALEGQAGAQG 1022
+G +G QG
Sbjct: 688 GPQGPPGPQGSSGPQG 703
Score = 32.7 bits (73), Expect = 1.9
Identities = 50/190 (26%), Positives = 64/190 (33%), Gaps = 41/190 (21%)
Query: 383 QRMPQQTYPGPRPQSLPIQNIKRPYPGEPNY-----GNQQYGPNSQFPTQPGQYPAPNPP 437
Q+ +Q P P P+ +P+PG+ G QQ P+ Q P Q P P
Sbjct: 566 QKQVEQIQPPPS-SGTPLLG-PQPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQ 623
Query: 438 RPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNR 497
P GQ P Q PP G P+ F G QG
Sbjct: 624 GQFRPPGPQGQMGP------QGPPLHQGGG---GPQGFMGPQG----------PQGPPQG 664
Query: 498 PPRPVPVAN--------YPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMS 549
PRP + PH P+ G PP GSS P + P PP + ++
Sbjct: 665 LPRPQDMHGPQGMQRHPGPHGPL-GPQGPPGPQGSS-----GPQGHMGPQGPPGPQGHIG 718
Query: 550 AL-PPPPANH 558
PP P H
Sbjct: 719 PQGPPGPQGH 728
Score = 32.7 bits (73), Expect = 1.9
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 941 PMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPS---QPPRQPPQAA 997
P+ P G P I QG PHPS Q P++ + PP P +PP Q
Sbjct: 581 PLLGPQPFPGQG--PMSQIPQGFQQPHPSQQM--PMNMAQMGPPGPQGQFRPPGPQGQMG 636
Query: 998 PSSHPHSDLTFNPSSALEGQAGAQGASDMPE 1028
P P P +G G QG P+
Sbjct: 637 PQGPPLHQGGGGP----QGFMGPQGPQGPPQ 663
Score = 32.3 bits (72), Expect = 2.4
Identities = 39/175 (22%), Positives = 50/175 (28%), Gaps = 19/175 (10%)
Query: 868 GPSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDM 927
GP L PPP G QG G PH + G P L P
Sbjct: 863 GPPQGSLGPPPQGGMQGPPGPQGQQNPARG----PHPSQGPIPFQQ--QKTPLLGDGPRA 916
Query: 928 PNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLHHSGAPPPPPS 987
P N + P+ + G+ + P P+ GPP HH G P
Sbjct: 917 PFNQEG-QSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMG-----PM 970
Query: 988 QPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPELTNPDE 1042
R P P G +G D P D + + PD+
Sbjct: 971 SERRHEQSGGPEHGPE-------RGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDD 1018
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 62.8 bits (151), Expect = 2e-09
Identities = 93/383 (24%), Positives = 132/383 (34%), Gaps = 68/383 (17%)
Query: 196 GGNPMASGMTTSN-PGLNSPQFAGQQQQFSAKAGPAQPYIQQSMYGRPNYP--GSGGFGA 252
GG P G+ + P L S A + P P +S +P P G G F
Sbjct: 95 GGPPGLGGLFQAGMPKLRST--ANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPV 152
Query: 253 SYPG---GPNAPAGMGIPPHTRPPADFTQPAAAAAAAAVAAAAATATATATATVAALQET 309
PG GP P +PP P D V + + +T +Q +
Sbjct: 153 PSPGHRSGPPEPQRNRMPP---PRPD------------VGSKPDSIPPPVPSTPRPIQSS 197
Query: 310 QNKDINQYGPMGPTQAYNSQFMNQ-PGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMN 368
+ + P GP Q PG RG A GGS+ + ++ S P
Sbjct: 198 PHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLS--------SSSPFSNR 249
Query: 369 QPRPPGISPFGTHGQRMPQQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQP 428
P PP T + + + P P P + P P N+ P++ P+
Sbjct: 250 PPLPP------TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAS 303
Query: 429 GQYPAPNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYS 488
Q P P PP PS+P PP + + + Q N ++ + S
Sbjct: 304 SQAPPPPPP-------------PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPS 350
Query: 489 NYSQGNVNRPPR---PVPVANYPHSPVPGNPTPPMTPGSSIPPYL-------------SP 532
G + PP P PV + P P P PP++ S L SP
Sbjct: 351 PGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSP 410
Query: 533 SQDVKPPFPPDIKPNMSALPPPP 555
+PP PPD +P+ A PPPP
Sbjct: 411 RSGPRPPLPPD-RPSAGAPPPPP 432
Score = 51.6 bits (122), Expect = 4e-06
Identities = 98/429 (22%), Positives = 139/429 (32%), Gaps = 61/429 (14%)
Query: 109 LRHQKSRQSDPPG-KLPMQPPLSSMSSMKPTLSHSD-GSFPYDSV------PWQQNTNQP 160
LR +R +D G + P+ PP +S KP S G FP S P Q P
Sbjct: 111 LRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMP 170
Query: 161 PGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSPQFAGQQ 220
P V + ++ V P ++P N G P+ G +PG P F G +
Sbjct: 171 PPRPDVGSK----PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNR 226
Query: 221 QQFSAKAGPAQPYIQQS--MYGRPNYPGSGGFGA-SYPGGPNAPAG-------MGIPPHT 270
Q + S RP P + P P P G +PP
Sbjct: 227 GTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPP-- 284
Query: 271 RPPADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQ----AY 326
PP +P + A++ A + + N P P + +
Sbjct: 285 -PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSS 343
Query: 327 NSQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMP 386
++ + PG GP S P P G SGP P PP +S G+ + +P
Sbjct: 344 STPPLPSPGRSGPLPPPPSERPPPPV--RDPPGRSGP-----LPPPPPVSRNGSTSRALP 396
Query: 387 QQTYPGPRPQSLPIQNIKRPYPGEPNYGNQQYGPNSQFPTQPGQYPAPNPPRPLTSPNYP 446
PQ P + + GP P AP PP P TS
Sbjct: 397 ------ATPQ----------LPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
Query: 447 GQRMPSQP--SSGQYPPPTVNMGQYYKPEQFNGQNNTFSGSSYSNYSQGNVNRPPRPVPV 504
Q P + S Y P ++ PE + ++ N S+ NR R P
Sbjct: 441 FQDSPCEDEWESRFYFHPISDLP---PPEPYVQTTKSYPSKLARNESRSGSNRRERGAP- 496
Query: 505 ANYPHSPVP 513
P P+P
Sbjct: 497 ---PLPPIP 502
Score = 44.3 bits (103), Expect = 6e-04
Identities = 77/282 (27%), Positives = 100/282 (35%), Gaps = 61/282 (21%)
Query: 823 RPVPIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEMIAALGPG-PSPYPLPPP-PG- 879
R P + D+ K PD IP T P Q N GP PSP P PPP PG
Sbjct: 168 RMPPPRPDVGSK--PDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGN 225
Query: 880 -GTNSNDYSSQGNNYQGHGNF---------------DFPHGNPGGTSMNDFMHG------ 917
GT S + + F D P P +H
Sbjct: 226 RGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPP 285
Query: 918 PPQLSHPP--DMPNNMAALEKPL-----SHPMQETMPHAGSSDQPHPSI-QQGLHVPHPS 969
PPQ + PP P A+ + P S P +P + S + P + Q+ L +
Sbjct: 286 PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSL---- 341
Query: 970 SQSGPPLH---HSGAPPPPPSQ----PPRQPPQAAPSSHPHSDLTFNPSSA--------L 1014
S S PPL SG PPPPS+ P R PP + P ++ N S++ L
Sbjct: 342 SSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL 401
Query: 1015 EGQAGAQGASDMPEPSLDLLPELTNPDELLSYLDPPDLPSNS 1056
++G P P L PD + PP PS S
Sbjct: 402 PSRSGVDSPRSGPRPPLP-------PDRPSAGAPPPPPPSTS 436
Score = 37.4 bits (85), Expect = 0.076
Identities = 43/153 (28%), Positives = 50/153 (32%), Gaps = 21/153 (13%)
Query: 869 PSPYPLPPPPGGTNSNDYSSQGNNYQGHGNFDFPHGNPGGTSMNDFMHGPPQLSHPPDMP 928
P P PLPP G + Q N P G PP PP
Sbjct: 316 PGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLP------PPPSERPPPPV 369
Query: 929 NNMAALEKPLSHPMQETMPHAGSSDQPH-PSIQQGLHVPHPSSQSGPPLH----HSGAPP 983
+ PL P + + S P P + V P S PPL +GAPP
Sbjct: 370 RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPP 429
Query: 984 PPP-SQPPRQPPQAAPSS---------HPHSDL 1006
PPP S R Q +P HP SDL
Sbjct: 430 PPPPSTSIRNGFQDSPCEDEWESRFYFHPISDL 462
Score = 37.0 bits (84), Expect = 0.099
Identities = 40/155 (25%), Positives = 50/155 (32%), Gaps = 25/155 (16%)
Query: 890 GNNYQGHGNFDFPHGNPGGTSMND---------FMHGPPQLSHPPDMPNNMAALEKPLSH 940
G + G G F G GG S F G P+L + N+ PL
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLP 130
Query: 941 PMQETMPHAGSSDQPH--PSIQQGLHVPHPSSQSGPPLHHSGAPPPP----PSQPPRQPP 994
P + +S +P PS VP P +SGPP PPP S+P PP
Sbjct: 131 PGGRS-----TSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP 185
Query: 995 QAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEP 1029
+ P N G G P P
Sbjct: 186 PVPSTPRPIQSSPHN-----RGSPPVPGGPRQPSP 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,361,640
Number of Sequences: 37866
Number of extensions: 4097133
Number of successful extensions: 49082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 1511
Number of HSP's that attempted gapping in prelim test: 20478
Number of HSP's gapped (non-prelim): 17127
length of query: 1067
length of database: 18,247,518
effective HSP length: 113
effective length of query: 954
effective length of database: 13,968,660
effective search space: 13326101640
effective search space used: 13326101640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.