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Search of human proteins with 31543535
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543535 R3H domain containing 1 [Homo sapiens]
(1099 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543535 R3H domain containing 1 [Homo sapiens] 2238 0.0
gi|162951884 R3H domain containing 2 [Homo sapiens] 879 0.0
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 737 0.0
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 74 6e-13
gi|50345997 E1A binding protein p300 [Homo sapiens] 70 8e-12
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 70 8e-12
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 70 8e-12
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 70 8e-12
gi|55750053 atrophin-1 [Homo sapiens] 69 2e-11
gi|55750041 atrophin-1 [Homo sapiens] 69 2e-11
gi|47132519 Ras association and pleckstrin homology domains 1 is... 68 5e-11
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 68 5e-11
gi|146134388 YLP motif containing 1 [Homo sapiens] 67 9e-11
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens] 67 9e-11
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 66 2e-10
gi|119943102 CREB binding protein isoform b [Homo sapiens] 65 3e-10
gi|119943104 CREB binding protein isoform a [Homo sapiens] 65 3e-10
gi|60460889 Myb protein P42POP [Homo sapiens] 65 3e-10
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 65 5e-10
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 65 5e-10
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 65 5e-10
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 65 5e-10
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 64 6e-10
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 64 6e-10
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 64 6e-10
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 64 6e-10
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 64 8e-10
gi|238859557 regulatory factor X1 [Homo sapiens] 64 1e-09
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 63 1e-09
gi|40807465 zinc finger protein 341 [Homo sapiens] 63 1e-09
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 2238 bits (5799), Expect = 0.0
Identities = 1099/1099 (100%), Positives = 1099/1099 (100%)
Query: 1 MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPL 60
MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPL
Sbjct: 1 MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPL 60
Query: 61 QSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSK 120
QSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSK
Sbjct: 61 QSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLTQSFEKEEKPSK 120
Query: 121 DEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILD 180
DEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILD
Sbjct: 121 DEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILD 180
Query: 181 FIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNE 240
FIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNE
Sbjct: 181 FIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNE 240
Query: 241 HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQ 300
HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQ
Sbjct: 241 HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQ 300
Query: 301 DSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPW 360
DSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPW
Sbjct: 301 DSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPW 360
Query: 361 SSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGS 420
SSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGS
Sbjct: 361 SSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGS 420
Query: 421 LSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGI 480
LSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGI
Sbjct: 421 LSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGI 480
Query: 481 PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFS 540
PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFS
Sbjct: 481 PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFS 540
Query: 541 QDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPP 600
QDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPP
Sbjct: 541 QDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPP 600
Query: 601 PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYR 660
PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYR
Sbjct: 601 PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYR 660
Query: 661 PVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQI 720
PVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQI
Sbjct: 661 PVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQI 720
Query: 721 QGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQ 780
QGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQ
Sbjct: 721 QGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQ 780
Query: 781 QNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNN 840
QNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNN
Sbjct: 781 QNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNN 840
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLST 900
PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLST
Sbjct: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLST 900
Query: 901 LKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH 960
LKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH
Sbjct: 901 LKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH 960
Query: 961 GNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRD 1020
GNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRD
Sbjct: 961 GNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRD 1020
Query: 1021 PQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFK 1080
PQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFK
Sbjct: 1021 PQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFK 1080
Query: 1081 LRTSKKHYDFHILERASSQ 1099
LRTSKKHYDFHILERASSQ
Sbjct: 1081 LRTSKKHYDFHILERASSQ 1099
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 879 bits (2272), Expect = 0.0
Identities = 532/1116 (47%), Positives = 684/1116 (61%), Gaps = 159/1116 (14%)
Query: 3 MSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPLQS 62
MS++ T ++ MK+ E ++ + + +N S+ K +EK + QR +
Sbjct: 1 MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTPSKEEIEKECEDTSLRQETQRRTSN 60
Query: 63 FGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLT-QSFEKEEKPSKD 121
G KR+KS+SKLKLVRSLAVCEES P A + E Q+ IQ+ ++ S ++EEK +KD
Sbjct: 61 HGHARKRAKSNSKLKLVRSLAVCEESSTPFA-DGPLETQDIIQLHISCPSDKEEEKSTKD 119
Query: 122 EAEKE---KASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEI 178
+EKE K +K+PRKMLSRDSSQEYTDSTGIDLHEFLVNTLK NPRDRMMLLKLEQEI
Sbjct: 120 VSEKEDKDKNKEKIPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEI 179
Query: 179 LDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKF 238
L+FI +N + KKFP MTSYHRMLLHRVAAYFG+DHNVDQ+GK+VI+NKTSNTRIP+Q+F
Sbjct: 180 LEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRF 239
Query: 239 NEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIF 298
+EHIKD+K +FQ+R+ILKRD++S D+DDNQ
Sbjct: 240 SEHIKDEKNTEFQQRFILKRDDASMDRDDNQT---------------------------- 271
Query: 299 SQDSLCSQENYIIDKRLQDED-ASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEP 357
Q Y+ D RL E +SS+ +RRQIFR N++ R+++S QSST++ELK EP
Sbjct: 272 ------GQNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEP 325
Query: 358 RPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSS 417
RPWSSTDSD S+R+++P VTKASSFSGIS+LTRGDS GSSK G S
Sbjct: 326 RPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGDSIGSSK----------------GGS 369
Query: 418 TGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEA 477
G +S PG AL GAP V QV S + LLP A
Sbjct: 370 AGRISR-----PGMAL-----GAPEVC----------------NQVTSSQSVRGLLPCTA 403
Query: 478 AGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAAN- 536
QQ + Q+P P P P QQP N
Sbjct: 404 Q------------------------------QQQQQQQQQLPALP----PTPQQQPPLNN 429
Query: 537 HIFSQ-DNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPP 595
H+ SQ D+L + F MSL+RQ S + +DP AA+FQ+ ++ Q PQQ+ +IM +
Sbjct: 430 HMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMAST------- 482
Query: 596 PPPPPPPPPPLPPGQPVPTAGYPASGH-PVSQPVLQQQGYIQQPSPQMPACYCAPGHYHS 654
GQP+PT+ Y S H P +Q VL QGY+Q P Q+ Y PG Y +
Sbjct: 483 -------------GQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQ-QIQVSYYPPGQYPN 528
Query: 655 SQPQYRPVPS-VHYNSHLNQPLPQPAQQTGYQ-VIPNQQQN-YQGIVGVQQPQSQSLVSG 711
S QYRP+ V Y+ Q LPQP+QQ G Q ++PNQQQ YQG++GVQQPQ+Q L+S
Sbjct: 529 SNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSS 588
Query: 712 QPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFP-NQSNQGSMPTTGMP 770
Q +S+G Q+QG+V+ YT +P+YQV + SQ + +QQP++ P +QS QG +P G+P
Sbjct: 589 QRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVP 648
Query: 771 VYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGM 830
VYYS+IPP QQN S SVG+LQ PGSEQ Q P++ SPCS Q+ P P G+
Sbjct: 649 VYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGP---GV 705
Query: 831 VMMQLSVPNNPQSCAH-SPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSS-PIIS 888
V+MQL+VPN PQ + S QW KYY QRGQK + S D+ Q + Q+SS P+ S
Sbjct: 706 VVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTS 765
Query: 889 PAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP---PAVL 945
P QSPAP+ +++L +V PL ++ QF RP P QGD RY LLGQPLQYN P +L
Sbjct: 766 PTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLL 825
Query: 946 HGHIPN--QQGQPGSRHGNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEK 1003
HG QGQ G +HGNRG+RQA K+ASTDLG + V+G+VLE+T+LP+GITR EA+K
Sbjct: 826 HGQSTYTVHQGQSGLKHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEGITRTEADK 885
Query: 1004 LFGELFKIGAKIRWLRDPQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSIS 1063
LF +L GAKI+WL+D Q P G GDN+ E + SDLA+ YT++A FPS
Sbjct: 886 LFTQLAMSGAKIQWLKDAQGLPGG-----GGGDNSGTAENGRHSDLAALYTIVAVFPSPL 940
Query: 1064 AAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ 1099
AAQNA + NSV++FKLR +KK+YD ILERASSQ
Sbjct: 941 AAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 976
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 737 bits (1903), Expect = 0.0
Identities = 418/804 (51%), Positives = 547/804 (68%), Gaps = 88/804 (10%)
Query: 24 KDTTRVEN-LIKSENYGKILVEKNEHCIENNIDLQRPLQSFGQTGKRSKSSS-KLKLVRS 81
++T EN ++KSE+ + E ++LQR L++ Q ++SKS + K KL RS
Sbjct: 19 QETATPENGIVKSESLDE----------EEKLELQRRLEAQNQERRKSKSGAGKGKLTRS 68
Query: 82 LAVCEESPPPPAPEISQENQEKIQIQLTQ--SFEKEEKPSKDEAEKEKASDKLPRK---- 135
LAVCEES P E S ++QE I +QL+ S ++E+K KD++E+EK DK K
Sbjct: 69 LAVCEESSARPGGE-SLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEK 127
Query: 136 ----MLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKK 191
MLS+D SQEYTDSTGIDLHEFL+NTLKNN RDRM+LLK+EQEI+DFI +N + KK
Sbjct: 128 PKIRMLSKDCSQEYTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKK 187
Query: 192 FPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQ 251
FP M+SY RML+HRVAAYFGLDHNVDQ+GKSVI+NKTS+TRIP+Q+F EH+KD+KGE+ Q
Sbjct: 188 FPQMSSYQRMLVHRVAAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQ 247
Query: 252 KRYILKRDNSSFDKDDNQMRIR--LKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENY 309
KR+ILKRDNSS DK+DNQ +DDRRSKSIEEREEEYQR R+RIF+ DS+CSQE+
Sbjct: 248 KRFILKRDNSSIDKEDNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESL 307
Query: 310 IIDKRLQDEDA---SSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSE-PRPWSSTDS 365
++ ED+ + T ++RQ+FR N+D SGR++ S QSS+ENELK+S+ R WSSTDS
Sbjct: 308 FVENSRLLEDSNICNETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDS 367
Query: 366 DSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQ 425
DSS RNLKPA+TK +SF GI+VLTRGDS+ S++S G+LSK GSESS S GSS GSLS
Sbjct: 368 DSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSS-GSLSRTH 426
Query: 426 QPLPGTAL-SQSSHGAP--VVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAA-GIP 481
PL T L S + G+P V YP + G+ GQVA STS+ LLPLEAA GIP
Sbjct: 427 PPLQSTPLVSGVAAGSPGCVPYP----------ENGIGGQVAPSSTSYILLPLEAATGIP 476
Query: 482 PGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG------PPQPPLPAPPQ---- 531
PGSIL+NP TGQPF+NPDG+P +YNPP +QQP+RS + G P Q P P P Q
Sbjct: 477 PGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQP 536
Query: 532 ---QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAA-MFQSTVVLQSPQQSGYIMTA 587
Q A + +D++ +QF M+L+RQ S + +P + ++ S+++ Q QQ Y++ +
Sbjct: 537 PQPQMAGPLVTQRDDVATQFGQMTLSRQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIAS 596
Query: 588 APPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQ----QQGYIQQPSP-QM 642
GQ +PT G+ SG P+SQ VLQ QG++QQP P QM
Sbjct: 597 T--------------------GQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQM 636
Query: 643 PACYCAPGHY-HSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQ 701
P Y G Y S+ QYRP+ V YN+ +Q +PQ AQQ GYQ + + QQ +QG++GVQ
Sbjct: 637 PVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQ 696
Query: 702 Q-PQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSN 760
Q PQSQ++++ Q G +Q V++ Y ++ +YQV + QGSQG+P Q+YQQP+M PNQ+
Sbjct: 697 QPPQSQNVINNQQ---GTPVQSVMVSYPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAG 753
Query: 761 QGSMPTTGMPVYYSVIPPGQQNNL 784
QGS+P TGMPVY +V PP QNNL
Sbjct: 754 QGSLPATGMPVYCNVTPPTPQNNL 777
Score = 33.5 bits (75), Expect = 1.1
Identities = 81/322 (25%), Positives = 110/322 (34%), Gaps = 54/322 (16%)
Query: 675 LPQPAQQTGYQVIPNQQQNY----QGIVGVQQPQSQSLVS---GQPNSIGNQIQGVVIPY 727
+P P G QV P+ + G+ P L++ GQP + + P
Sbjct: 446 VPYPENGIGGQVAPSSTSYILLPLEAATGI--PPGSILLNPHTGQPFVNPDGTPAIYNPP 503
Query: 728 TSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYS----VIPPGQQNN 783
TS + ++ SQ P Q QQP P Q Q P P+ GQ
Sbjct: 504 TSQQPLRSAMVGQSQQQPPQ--QQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTL 561
Query: 784 LSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGG----GMVMMQ--LSV 837
S G P S V +P + P +QQ + G P GG G + Q L
Sbjct: 562 SRQSSGETPEPPSGPV-YPSSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQP 620
Query: 838 PNNPQSCAHSPPQWKQNKYYCDH-----QRGQKCVEFSSVDNIVQHSPQLS--------S 884
P +PQ PP + YY Q+ + V Q S Q+
Sbjct: 621 PPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQ 680
Query: 885 PIISPAQS-------PAPAQLSTLKTVRPSGPPLSIM---PQFSRPFVPGQGDSRYPLLG 934
P++S Q P Q + + P S+M P S VP S+ G
Sbjct: 681 PVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVSYPTMSSYQVPMTQGSQ----G 736
Query: 935 QPLQ-YNPPAVLHGHIPNQQGQ 955
P Q Y P +L PNQ GQ
Sbjct: 737 LPQQSYQQPIML----PNQAGQ 754
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 74.3 bits (181), Expect = 6e-13
Identities = 100/393 (25%), Positives = 130/393 (33%), Gaps = 99/393 (25%)
Query: 421 LSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGI 480
L+ IQQ GT L + + P + + + +GG + ST L L A G
Sbjct: 50 LADIQQ---GTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGF 106
Query: 481 P------------------PGSILINPQTGQPFIN----PDGSPVVYNPPMTQ-----QP 513
P PGS +P+ I+ P SP + N P
Sbjct: 107 PVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAP 166
Query: 514 VRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTV 573
R VP PP PP P PP P P S P S
Sbjct: 167 PRPNVPAPP-PPTPPPPPPPLP---------------------PPLPSSSPIKTPLVSP- 203
Query: 574 VLQSPQQSGYIMTAAPPPHPPPPPPPPPPP--------------------------PPLP 607
P G + APP PPPPPPPPP PP+P
Sbjct: 204 --PGPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIP 261
Query: 608 PGQP-VPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVH 666
P P +P GYP + P Q P P P C+P +S P P+P V+
Sbjct: 262 PPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSP---RASLPA-PPLPGVN 317
Query: 667 YNSHLNQPLP-------QPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQ 719
+S PLP P Q+ G Q +P QP Q G+P + G +
Sbjct: 318 SSSETPPPLPPKSPSFQAPPQKAGAQALPAPP-----APPGSQPFLQKKRHGRPGAGGGK 372
Query: 720 IQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQP 752
+ P PT ++S + Q QQP
Sbjct: 373 LNPPPAPPARSPTTELS-SKSQQATAWTPTQQP 404
Score = 53.5 bits (127), Expect = 1e-06
Identities = 68/267 (25%), Positives = 96/267 (35%), Gaps = 35/267 (13%)
Query: 582 GYIMTAAPPPHPPPPPPP--PPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPS 639
G TA P P+ P PPPP PPPPPPLPP P+P++ P VS P +G + +
Sbjct: 160 GAARTAPPRPNVPAPPPPTPPPPPPPLPP--PLPSSS-PIKTPLVSPPGPLTKGNLPVVA 216
Query: 640 PQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPA----QQTGYQVIPNQQQNYQ 695
P +P CAP P P P+ PLP + + Q+ P
Sbjct: 217 PPVP---CAP-----PPPPPPPPPT-------PPPLPPASVLSDKAVKPQLAPLHLPPIP 261
Query: 696 GIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIP-----HQTYQ 750
+ + P + +P S Q P +P Y P+ S P + + +
Sbjct: 262 PPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSE 321
Query: 751 QPVMFPNQSNQGSMP---TTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQ---FPRT 804
P P +S P + PPG Q L G ++ P
Sbjct: 322 TPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPA 381
Query: 805 TSPCSSQQLQGHQCTAGPPPPPGGGMV 831
SP + + Q TA P GG +
Sbjct: 382 RSPTTELSSKSQQATAWTPTQQPGGQL 408
Score = 48.5 bits (114), Expect = 3e-05
Identities = 58/248 (23%), Positives = 84/248 (33%), Gaps = 31/248 (12%)
Query: 590 PPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAP 649
P PPPPPP PPPPPPL P P P + PV +++ P+ + A
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPP---------PSAPPVSTDTSSLRRADPKGRSALLAD 52
Query: 650 GHYHS-----SQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQ 704
+ +Q R P + + N+ A G P + G V +P
Sbjct: 53 IQQGTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPA 112
Query: 705 SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVS---LPQGSQ--GIPHQTYQQPVMFPNQS 759
Q V+G G G P +P +S +P S G + + P +
Sbjct: 113 GQRDVAGGKTGQG---PGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRP 169
Query: 760 NQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGS-EQVQFPRTTSPCSSQQLQGHQC 818
N + P P +PP ++ + PG + P P C
Sbjct: 170 NVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPV--------PC 221
Query: 819 TAGPPPPP 826
PPPPP
Sbjct: 222 APPPPPPP 229
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 70.5 bits (171), Expect = 8e-12
Identities = 143/574 (24%), Positives = 203/574 (35%), Gaps = 114/574 (19%)
Query: 481 PPGSILINPQTGQPFINPDGSPVVYNPP----------MTQQPVRSQV--PGPPQ---PP 525
P G PQT QP P +P PP ++Q QV P PPQ PP
Sbjct: 1858 PTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPP 1917
Query: 526 LPAPPQQPAANHIFSQDNLGS----QFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQ- 580
LP PP PAA + Q + Q +H+ + ++P P M + + + P
Sbjct: 1918 LPGPP--PAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPM--APMGMNPPPMT 1973
Query: 581 ---SGYIMTAAPPPHPPPPPP------PPP-------PPPPLPP----GQPVPTAGYPAS 620
SG++ P PP P P P P + GQP+ A P
Sbjct: 1974 RGPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQLQSGMPRPAMMSVAQHGQPLNMAPQPGL 2033
Query: 621 GH------------------------PVSQPVLQQQGY-IQQPSPQMPACYCAP--GHYH 653
G S P+ QQQ I +PQ+ A + Y
Sbjct: 2034 GQVGISPLKPGTVSQQALQNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYA 2093
Query: 654 SSQPQYRP-VPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQ---PQSQSLV 709
+S PQ P P + QP P QQ G P Q GVQ+ PQ Q
Sbjct: 2094 NSNPQPIPGQPGMPQGQPGLQPPTMPGQQ-GVHSNPAMQNMNPMQAGVQRAGLPQQQPQQ 2152
Query: 710 SGQP--NSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQ--PVMFPNQSNQGSMP 765
QP + Q Q + + + ++P+ + + Q + Q Q P + P +N
Sbjct: 2153 QLQPPMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQ 2212
Query: 766 TTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQV-QFPRTTSPCSSQQLQGHQCTAGPPP 824
Y PP QQ + + +Q Q+ Q P+ + LQ +Q
Sbjct: 2213 QPQGVGY----PPQQQQRMQHHMQQMQQGNMGQIGQLPQALGAEAGASLQAYQQR----- 2263
Query: 825 PPGGGMVMMQLSVPNNPQSCAHSPPQWK-QNKYYCDHQRGQKCVEFSSVDNIVQHSPQLS 883
++ Q+ P P SP Q N+ H +GQ+ +S+ N V+ SPQ
Sbjct: 2264 -----LLQQQMGSPVQPNPM--SPQQHMLPNQAQSPHLQGQQIP--NSLSNQVR-SPQ-- 2311
Query: 884 SPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPA 943
P+ SP P S ++P P + PQ S P PG + Q NP
Sbjct: 2312 -PVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPH-PGLVAA---------QANPME 2360
Query: 944 VLHGHIPNQQGQPGSRHGNRGRRQAKKAASTDLG 977
H P+Q N G A++TDLG
Sbjct: 2361 QGHFASPDQNSMLSQLASNPGMANLHGASATDLG 2394
Score = 56.2 bits (134), Expect = 2e-07
Identities = 118/465 (25%), Positives = 171/465 (36%), Gaps = 82/465 (17%)
Query: 472 LLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQ 531
+LP AAG+ P S+ P GQP + + +P M +R VP P
Sbjct: 657 MLP-NAAGMVPVSMNPGPNMGQPQPGMTSNGPLPDPSM----IRGSVPNQMMP------- 704
Query: 532 QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPP 591
I Q L +QF MS+A+ P V Q+P + A P
Sbjct: 705 -----RITPQSGL-NQFGQMSMAQPP--------------IVPRQTPPLQHHGQLAQPGA 744
Query: 592 HPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQ-PVLQQQGYIQQPSPQMPACYCAPG 650
PP P P GQ +P +P+ G V+ P+ G QM + C
Sbjct: 745 LNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAPVSQAQMSSSSC--- 801
Query: 651 HYHSSQPQYRPV-PSVHYNSHLNQP-LPQPA-QQTGYQVIPNQ---QQNYQGIVGVQQPQ 704
P P+ P SH++ P LPQPA Q +P++ + +G QQP
Sbjct: 802 ------PVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPP 855
Query: 705 SQSLVSGQPN----SIGNQIQGVVIPYTSVPTYQVS-LPQGSQ-GIP-----HQTYQQPV 753
+ ++ + P G Q Q + P PT + LPQ Q +P Q QQP
Sbjct: 856 ATTIPAPVPTPPAMPPGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAPSADQPQQQP- 914
Query: 754 MFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTS--PCSSQ 811
QS S+PT P ++PP LS ++ QV P +TS +SQ
Sbjct: 915 -RSQQSTAASVPTPTAP----LLPPQPATPLSQPAVSIE----GQVSNPPSTSSTEVNSQ 965
Query: 812 QLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSS 871
+ Q P + M + P+ P ++K D + E S
Sbjct: 966 AIAEKQ--------PSQEVKMEAKMEVDQPEPADTQPEDISESKVE-DCKMESTETEERS 1016
Query: 872 VDNIVQHSPQLSSPIISPAQ-SPAPAQLSTLKTVRPSGPPLSIMP 915
+ + + P S Q SPAP Q S K +P ++MP
Sbjct: 1017 TELKTEIKEEEDQPSTSATQSSPAPGQ-SKKKIFKPEELRQALMP 1060
Score = 50.8 bits (120), Expect = 7e-06
Identities = 66/288 (22%), Positives = 95/288 (32%), Gaps = 58/288 (20%)
Query: 445 PTVSTHSSLSFDGGLNG------QVASPSTSFFLLP---LEAAGIPPGSILINPQTGQPF 495
P + H L+ G LN ++ PS LP + G+ +I + P +GQ
Sbjct: 731 PPLQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAP 790
Query: 496 IN---------PDGSPVVYNPPMTQQPVRSQVPGPPQP------PLPAPPQQPAANHIFS 540
++ P SP++ P Q P PQP P P P + P +H
Sbjct: 791 VSQAQMSSSSCPVNSPIM---PPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHT-- 845
Query: 541 QDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPP 600
PS P A + V G A HPPP P
Sbjct: 846 ---------------PPSIGAQQPPATTIPAPVPTPPAMPPGPQSQAL---HPPPRQTPT 887
Query: 601 PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYR 660
PP LP P++ P QP QQ P+P P P S
Sbjct: 888 PPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQ----- 942
Query: 661 PVPSVHYNSHLNQPLPQPAQQTGYQVI----PNQQQNYQGIVGVQQPQ 704
P+V ++ P + + Q I P+Q+ + + V QP+
Sbjct: 943 --PAVSIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPE 988
Score = 40.0 bits (92), Expect = 0.012
Identities = 80/369 (21%), Positives = 125/369 (33%), Gaps = 62/369 (16%)
Query: 661 PVPSVHYNSHLNQPLPQPAQQTGYQ-----------VIPNQQQNYQGIVGVQQPQSQSLV 709
P PS+ S NQ +P+ Q+G ++P Q Q + QP + +
Sbjct: 689 PDPSMIRGSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPLQHHGQLAQPGALNPP 748
Query: 710 SGQ-PNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTG 768
G P QG +P T P+ +++ + + + Q PV +Q M ++
Sbjct: 749 MGYGPRMQQPSNQGQFLPQTQFPSQGMNVT--NIPLAPSSGQAPV------SQAQMSSSS 800
Query: 769 MPVYYSVIPPGQQNNLSSSVGYLQ---HPGSEQVQFPRTTSP------CSSQQLQGHQCT 819
PV ++PPG Q + Q H S RT +P +QQ
Sbjct: 801 CPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIP 860
Query: 820 AGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHS 879
A P PP ++P PQS A PP R + + VQ S
Sbjct: 861 APVPTPP---------AMPPGPQSQALHPP-----------PRQTPTPPTTQLPQQVQPS 900
Query: 880 PQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMP--QFSRPFVPGQGDSRYPLLGQPL 937
+ P Q P Q + P+ P L P S+P V +G P
Sbjct: 901 LPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQVSNPPSTSST 960
Query: 938 QYNPPAVLHGHIPNQQGQPGSRHGNRGRRQAKKAASTDLGAGETVVGKV----LEITELP 993
+ N A+ + QP + + + D + KV +E TE
Sbjct: 961 EVNSQAI-------AEKQPSQEVKMEAKMEVDQPEPADTQPEDISESKVEDCKMESTETE 1013
Query: 994 DGITRMEAE 1002
+ T ++ E
Sbjct: 1014 ERSTELKTE 1022
Score = 33.9 bits (76), Expect = 0.87
Identities = 59/253 (23%), Positives = 76/253 (30%), Gaps = 36/253 (14%)
Query: 575 LQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGY 634
L SP + P P P P P P PP P + PVSQ + G
Sbjct: 1847 LPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQG--KAAGQ 1904
Query: 635 IQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNY 694
+ P+P A PG P +V + + Q Q+ Q+
Sbjct: 1905 VTPPTPPQTAQPPLPG---------PPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQ 1955
Query: 695 QGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVM 754
+ P + P + G + P Q P G+P QP
Sbjct: 1956 MPPMTPMAPMGMN-----PPPMTRGPSGHLEPGMGPTGMQQQPPWSQGGLP-----QP-- 2003
Query: 755 FPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQF-PRTTSPCSSQQL 813
Q Q MP P SV GQ N++ PG QV P S Q L
Sbjct: 2004 ---QQLQSGMP---RPAMMSVAQHGQPLNMA------PQPGLGQVGISPLKPGTVSQQAL 2051
Query: 814 QGHQCTAGPPPPP 826
Q T P P
Sbjct: 2052 QNLLRTLRSPSSP 2064
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 70.5 bits (171), Expect = 8e-12
Identities = 101/371 (27%), Positives = 128/371 (34%), Gaps = 83/371 (22%)
Query: 576 QSPQQSGYIMTAAPPPHPPPPPPPP-------PPPPPLPPGQPVPTAGYPASGHP----V 624
Q QQ+ + PPP P PPPPP PPPPP PP P A S P
Sbjct: 744 QQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIAT 803
Query: 625 SQPVLQQQ---------GYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSH----- 670
PVL+ Q G+ QP +P P H QP P H N H
Sbjct: 804 QVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPP---HLPQPPEHSTPP-HLNQHAVVSP 859
Query: 671 --LNQPLPQ---------------PAQ---------QTGYQVIPNQQQNYQGIVGVQQPQ 704
L+ LPQ PA+ QT P Q Q ++ ++P
Sbjct: 860 PALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPP 919
Query: 705 SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSL--PQGSQGIPHQTYQQPVMFPNQSNQG 762
+ L S Q Q+Q V P +P+ +V P PH + QQ + Q
Sbjct: 920 APPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQL---QQQPPP 976
Query: 763 SMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGP 822
P P PP QQ+ +LQ P + P QG Q P
Sbjct: 977 PPPPQPQP------PPQQQHQPPPRPVHLQ-PMQFSTHIQQPPPP------QGQQ---PP 1020
Query: 823 PPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQL 882
PPPG Q + P HSP K + Y H R + ++ HSPQ+
Sbjct: 1021 HPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLR-------EAPSPLMIHSPQM 1073
Query: 883 SSPIISPAQSP 893
S QSP
Sbjct: 1074 SQFQSLTHQSP 1084
Score = 53.9 bits (128), Expect = 8e-07
Identities = 83/298 (27%), Positives = 105/298 (35%), Gaps = 44/298 (14%)
Query: 414 VGSSTGSLSHIQQP-LPGTALSQSSHGAPVVYPTVSTHSSLS---FDGGLNGQVASPSTS 469
+G T + H+ QP LP H P P ++ H+ +S L Q + PS
Sbjct: 820 IGHFTQPILHLPQPELPPHLPQPPEHSTP---PHLNQHAVVSPPALHNALPQQPSRPSNR 876
Query: 470 FFLLPLEAAGIPPGS-------ILINPQTGQP--FINPDGSPVVYNPPMTQQPVRS---- 516
LP + A P S +L P QP + D P PP+T ++
Sbjct: 877 AAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPA--PPLTSMQMQLYLQQ 934
Query: 517 -QVPGPPQPPLPA-------PPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAM 568
Q PP P LP+ PP P H Q L Q QP H
Sbjct: 935 LQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQ-PPPPPPPQPQPPPQQQHQPP 993
Query: 569 FQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPP----PPPPPLPPGQPVPTAGYPASGHPV 624
V LQ Q S +I PP PP PPP PPP P P Q + P H
Sbjct: 994 -PRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPR--HHK 1050
Query: 625 SQPVLQQQGYIQQ-PSPQM---PACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQP 678
S P G++++ PSP M P H S PQ P + PQP
Sbjct: 1051 SDP--YSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQP 1106
Score = 47.8 bits (112), Expect = 6e-05
Identities = 51/208 (24%), Positives = 73/208 (35%), Gaps = 47/208 (22%)
Query: 507 PPMTQQPVRSQVPGPPQP--PLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDP 564
P ++ P +Q PPQ P P PP A H F A P
Sbjct: 191 PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFP-------------AVTPD------ 231
Query: 565 HAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPV 624
+++Q+P +MT PP PPP PP P P P P P +P
Sbjct: 232 --------LIVQTP-----VMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAAT 278
Query: 625 SQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
QPV ++G ++ P P H S P + ++P+ P +
Sbjct: 279 PQPVKTKKGVKRKADTTTPTT-IDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKD--- 334
Query: 685 QVIPNQQQNYQGIVGVQQPQSQSLVSGQ 712
+P+ QQ+ P+ S VS Q
Sbjct: 335 --VPDSQQH-------PAPEKSSKVSEQ 353
Score = 38.9 bits (89), Expect = 0.027
Identities = 41/170 (24%), Positives = 58/170 (34%), Gaps = 34/170 (20%)
Query: 494 PFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSL 553
P + PD +V P MT P + PP PP P PP PA + S
Sbjct: 226 PAVTPD--LIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQS------------- 270
Query: 554 ARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPP---------- 603
P + P + V ++ + T P H PP PP P
Sbjct: 271 --HPPIIAATPQPVKTKKGVKRKADTTT---PTTIDPIHEPPSLPPEPKTTKLGQRRESS 325
Query: 604 -PPLPPGQPVPTAGY---PASGHPVSQPVLQQQGYIQQPSPQMPACYCAP 649
P PP + VP + P VS+ + G +++ + A Y P
Sbjct: 326 RPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWP 375
Score = 38.9 bits (89), Expect = 0.027
Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 30/180 (16%)
Query: 507 PPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHA 566
PP QQP P PP PA PQQ +H + + +S L P
Sbjct: 1013 PPQGQQPPHPPPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAP--------- 1063
Query: 567 AMFQSTVVLQSPQQSGY--IMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPV 624
S +++ SPQ S + + +PP P + QP+ +
Sbjct: 1064 ----SPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVV----VKEEKI 1115
Query: 625 SQPVLQQQGY---IQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQ 681
P+++ + + ++ P+ P AP H +P+ +PV + +P+ +P +Q
Sbjct: 1116 HSPIIRSEPFSPSLRPEPPKHPESIKAPVHL-PQRPEMKPV-------DVGRPVIRPPEQ 1167
Score = 32.7 bits (73), Expect = 1.9
Identities = 46/184 (25%), Positives = 63/184 (34%), Gaps = 32/184 (17%)
Query: 793 HPGSEQV--------QFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSC 844
HPG EQ Q + +P Q Q PPPP P+ PQ
Sbjct: 730 HPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQA 789
Query: 845 A----HSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQ---HSPQLSSP--IISPAQSPAP 895
A SPP + + + V F + + Q H PQ P + P + P
Sbjct: 790 APAMKSSPPPFIATQVPVLEPQLPGSV-FDPIGHFTQPILHLPQPELPPHLPQPPEHSTP 848
Query: 896 AQLSTLKTV--------------RPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
L+ V RPS ++ P+ +RP ++ PLL QP P
Sbjct: 849 PHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQP 908
Query: 942 PAVL 945
P VL
Sbjct: 909 PQVL 912
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 70.5 bits (171), Expect = 8e-12
Identities = 150/631 (23%), Positives = 208/631 (32%), Gaps = 99/631 (15%)
Query: 363 TDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESS---------GS 413
T ++ L +T SS G GD SG + G +S +
Sbjct: 286 TPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAA 345
Query: 414 VGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLL 473
+++G P + S G P+ T S + G + Q + +
Sbjct: 346 AAAASGGAQQRSHHAPMSPGSSGGGGQPLAR-TPQPSSPMDQMGKMRPQPYGGTNPYS-- 402
Query: 474 PLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPP--- 530
+ G P G + GQP+ GS PMT Q G PP
Sbjct: 403 --QQQGPPSGPQQGHGYPGQPY----GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQ 456
Query: 531 QQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPP 590
Q P+ Q +Q S +QP P Q PQ + ++ P
Sbjct: 457 QGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQP 516
Query: 591 PHPPPPPPPPPPPPPLP-PGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAP 649
P+ P PP P P P Q T +P S P SQP Q Q QQ PQ PA
Sbjct: 517 PYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQP--QAQSPYQQQQPQQPA----- 569
Query: 650 GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY--QVIPNQQQNYQGIVGVQQPQSQS 707
S+ Q P QP Q +QQT Y Q P Q+ Q G Q + S
Sbjct: 570 ---PSTLSQQAAYP---------QPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPS 617
Query: 708 LVSGQPNSIGNQIQGVVIPYTSVPTYQVS---LPQGSQGIPHQTYQQPVMFPNQSNQGSM 764
+ S + + P +S+P S LP G++G + +Q Q +
Sbjct: 618 MTSSKGGQEDMNLSLQSRP-SSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNP 676
Query: 765 PTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP 824
+ + S PG + S V GS + P S + G+Q PP
Sbjct: 677 AQSPFSPHTSPHLPGIRGPSPSPV------GSPASVAQSRSGPLSPAAVPGNQM---PPR 727
Query: 825 PPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDH---QRGQKCVEFSSVDNIVQHSPQ 881
PP G QS + P Q+ D QR + ++S SPQ
Sbjct: 728 PPSG-------------QSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYS--------SPQ 766
Query: 882 LSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
S +SP Q P+ Q+ T + Q S QG P G P Q N
Sbjct: 767 PGS-ALSPRQ-PSGGQIHT---------GMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNY 815
Query: 942 PAVLHGHIP--------NQQGQPGSRHGNRG 964
A+ + + P N G G HG G
Sbjct: 816 NALPNANYPSAGMAGGINPMGAGGQMHGQPG 846
Score = 40.8 bits (94), Expect = 0.007
Identities = 114/557 (20%), Positives = 191/557 (34%), Gaps = 72/557 (12%)
Query: 319 DASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTK 378
D+ +Q + Q S + + QS++ + + + +P + + S P +++
Sbjct: 1122 DSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSR 1181
Query: 379 ASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSH 438
++S G S K G + S + G +S+ P ++ ++
Sbjct: 1182 SNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241
Query: 439 GAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINP 498
P +S G NG + P + AAG G++ + P+ P+ P
Sbjct: 1242 SDPF----------MSSGQGPNGGMGDPYS-------RAAGPGLGNVAMGPRQHYPYGGP 1284
Query: 499 DGSPVVYNPPMTQQ---PVRSQVPGPPQPPL-PAPPQQP--AANHIFSQDNLGSQFSHMS 552
Y+ T+ P + G PQP L P+ P + + Q Q H S
Sbjct: 1285 ------YDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDS 1338
Query: 553 LARQPSADGSDPHAAMFQSTVVLQSPQQSGYIM----TAAPPPH---------PPPPPPP 599
Q S G+ + + QQ Y T PP P
Sbjct: 1339 YGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQG 1398
Query: 600 PPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQY 659
P LPP QP PAS +QP QQ Y Q + A + PQ
Sbjct: 1399 QPQQQQLPPAQP-----QPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQN 1453
Query: 660 RPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQ 719
+ P ++ P AQQ +P Q + Q ++ G+ + N
Sbjct: 1454 Q-FPFQFGRDRVSAPPGTNAQQN----MPPQMMGGPIQASAEVAQQGTMWQGRNDMTYN- 1507
Query: 720 IQGVVIPYTSVPTYQVSLPQGS--QGIPHQTYQQPVMFPNQSNQGSMPTTG--MPVY--Y 773
Y + + S PQG G+ ++T + +++GS P+ G P Y
Sbjct: 1508 -------YANRQSTG-SAPQGPAYHGV-NRTDEMLHTDQRANHEGSWPSHGTRQPPYGPS 1558
Query: 774 SVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMM 833
+ +PP + S+ Q P S Q P+ +SP + ++ + P GM M
Sbjct: 1559 APVPPMTRPPPSN----YQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQ 1614
Query: 834 QLSVPNNPQSCAHSPPQ 850
+ P A +P Q
Sbjct: 1615 KAGPPVPASHIAPAPVQ 1631
Score = 32.0 bits (71), Expect = 3.3
Identities = 33/123 (26%), Positives = 46/123 (37%), Gaps = 16/123 (13%)
Query: 510 TQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMF 569
T+QP P P PP+ PP Q+++ S L R P + + P + F
Sbjct: 1550 TRQPPYG--PSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPR-PMENRTSPSKSPF 1606
Query: 570 QSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVL 629
SG M A PP P P P PP+ +P +QPVL
Sbjct: 1607 L---------HSGMKMQKAGPPVPASHIAPAPVQPPMIRRDIT----FPPGSVEATQPVL 1653
Query: 630 QQQ 632
+Q+
Sbjct: 1654 KQR 1656
Score = 31.2 bits (69), Expect = 5.6
Identities = 110/531 (20%), Positives = 169/531 (31%), Gaps = 101/531 (19%)
Query: 471 FLLPLEAAGIPPGSILI--NPQTGQPFINPD---GSPVVYNPPMTQQPVRSQVPG----P 521
F +E PP I + + QP I P GS + P Q S G P
Sbjct: 1103 FECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKP 1162
Query: 522 PQPP------LPAPPQQPAANHIFSQD--NLGSQFSHMSL-------ARQPSADGSDPHA 566
P P +P P +N + QD N GS + QPS + SD
Sbjct: 1163 PTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMG 1222
Query: 567 AMFQST------VVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPAS 620
M + ++P ++ + P P P L P YP
Sbjct: 1223 RMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYG 1282
Query: 621 G---HPVSQPVLQQQGYIQQPSPQMPACYCAP--GHYHSSQ--PQYRPVPSVHYNSHLNQ 673
G ++P + +G + +PQ P G Y S+ PQ + ++S+ NQ
Sbjct: 1283 GPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQ 1342
Query: 674 --------PLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVI 725
P P+QQT + QQQNY+ +P + P + ++ + +
Sbjct: 1343 FSTQGTPSGSPFPSQQT--TMYQQQQQNYK------RPMDGTY---GPPAKRHEGEMYSV 1391
Query: 726 PYTSVPTYQVSLPQGSQGIPHQTYQQPVM-FPNQSNQGSMPTTGMPVYYSVIPPGQQNNL 784
PY++ QG P Q P P Q + P+ VY G
Sbjct: 1392 PYST-----------GQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQY---GNAYPA 1437
Query: 785 SSSVGYLQHP-GSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQS 843
+++ + P G Q QFP G PP GG + V
Sbjct: 1438 TATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEV------ 1491
Query: 844 CAHSPPQWKQNK----YYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLS 899
A W+ Y + Q + + + + L + + + P+ +
Sbjct: 1492 -AQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGT 1550
Query: 900 TLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIP 950
PS P +P +RP P Y PP + HIP
Sbjct: 1551 RQPPYGPSAP----VPPMTRP--------------PPSNYQPPPSMQNHIP 1583
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 70.5 bits (171), Expect = 8e-12
Identities = 150/631 (23%), Positives = 208/631 (32%), Gaps = 99/631 (15%)
Query: 363 TDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESS---------GS 413
T ++ L +T SS G GD SG + G +S +
Sbjct: 286 TPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCWGAAAAAAA 345
Query: 414 VGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLL 473
+++G P + S G P+ T S + G + Q + +
Sbjct: 346 AAAASGGAQQRSHHAPMSPGSSGGGGQPLAR-TPQPSSPMDQMGKMRPQPYGGTNPYS-- 402
Query: 474 PLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPP--- 530
+ G P G + GQP+ GS PMT Q G PP
Sbjct: 403 --QQQGPPSGPQQGHGYPGQPY----GSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQ 456
Query: 531 QQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPP 590
Q P+ Q +Q S +QP P Q PQ + ++ P
Sbjct: 457 QGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQP 516
Query: 591 PHPPPPPPPPPPPPPLP-PGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAP 649
P+ P PP P P P Q T +P S P SQP Q Q QQ PQ PA
Sbjct: 517 PYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQP--QAQSPYQQQQPQQPA----- 569
Query: 650 GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY--QVIPNQQQNYQGIVGVQQPQSQS 707
S+ Q P QP Q +QQT Y Q P Q+ Q G Q + S
Sbjct: 570 ---PSTLSQQAAYP---------QPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPS 617
Query: 708 LVSGQPNSIGNQIQGVVIPYTSVPTYQVS---LPQGSQGIPHQTYQQPVMFPNQSNQGSM 764
+ S + + P +S+P S LP G++G + +Q Q +
Sbjct: 618 MTSSKGGQEDMNLSLQSRP-SSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNP 676
Query: 765 PTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP 824
+ + S PG + S V GS + P S + G+Q PP
Sbjct: 677 AQSPFSPHTSPHLPGIRGPSPSPV------GSPASVAQSRSGPLSPAAVPGNQM---PPR 727
Query: 825 PPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDH---QRGQKCVEFSSVDNIVQHSPQ 881
PP G QS + P Q+ D QR + ++S SPQ
Sbjct: 728 PPSG-------------QSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYS--------SPQ 766
Query: 882 LSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
S +SP Q P+ Q+ T + Q S QG P G P Q N
Sbjct: 767 PGS-ALSPRQ-PSGGQIHT---------GMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNY 815
Query: 942 PAVLHGHIP--------NQQGQPGSRHGNRG 964
A+ + + P N G G HG G
Sbjct: 816 NALPNANYPSAGMAGGINPMGAGGQMHGQPG 846
Score = 38.9 bits (89), Expect = 0.027
Identities = 71/345 (20%), Positives = 121/345 (35%), Gaps = 58/345 (16%)
Query: 319 DASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTK 378
D+ +Q + Q S + + QS++ + + + +P + + S P +++
Sbjct: 1122 DSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSR 1181
Query: 379 ASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSH 438
++S G S K G + S + G +S+ P ++ ++
Sbjct: 1182 SNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241
Query: 439 GAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINP 498
P +S G NG + P + AAG G++ + P+ P+ P
Sbjct: 1242 SDPF----------MSSGQGPNGGMGDPYS-------RAAGPGLGNVAMGPRQHYPYGGP 1284
Query: 499 DGSPVVYNPPMTQQ---PVRSQVPGPPQPPL-PAPPQQP--AANHIFSQDNLGSQFSHMS 552
Y+ T+ P + G PQP L P+ P + + Q Q H S
Sbjct: 1285 ------YDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDS 1338
Query: 553 LARQPSADGSDPHAAMF--QSTVVLQSPQQSGYIMTAAPPPHP----------------- 593
Q S G+ P + F Q T + Q QQ + + AP P P
Sbjct: 1339 YGNQFSTQGT-PSGSPFPSQQTTMYQQQQQ---VSSPAPLPRPMENRTSPSKSPFLHSGM 1394
Query: 594 ------PPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ 632
PP P P P+ P +P +QPVL+Q+
Sbjct: 1395 KMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQR 1439
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 69.3 bits (168), Expect = 2e-11
Identities = 179/772 (23%), Positives = 260/772 (33%), Gaps = 187/772 (24%)
Query: 268 NQMRIRLKDDRRSKSIEEREEEYQRARDR-----IFSQDSLCSQENYIIDK-RLQDEDAS 321
N+ + ++ R+ ++ REE R R S D + K R+++
Sbjct: 6 NKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTP 65
Query: 322 STQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASS 381
++ + +++ S + ++ TE EL PRP S +D DS
Sbjct: 66 KVNKQGRSEEISESESEETNAPKKTKTEQEL----PRPQSPSDLDS-------------- 107
Query: 382 FSGISVLTRGDSSGSSKSIGRLSKTGSES---SGSVGSSTGSLSHIQQPLPGTALSQSSH 438
G S+ D S + I + +++ S S GSV + + S S + Q ++ H
Sbjct: 108 LDGRSL--NDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQ-----GPARPYH 160
Query: 439 GAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPG-SILINPQTGQPFIN 497
P+ P+ S P SF P + P G + P T + F
Sbjct: 161 PPPLFPPSPQPPDSTP---------RQPEASFEPHP---SVTPTGYHAPMEPPTSRMFQA 208
Query: 498 PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQ---DNLGSQFSHMSLA 554
P G+P PP Q PG L PP P S N G Q +
Sbjct: 209 PPGAP----PPHPQL-----YPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 555 RQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPL-------- 606
S+ G A+ T +P G + +A PP + P P PPPP L
Sbjct: 260 ISVSSSG----ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 607 -PPG---QPVPTAGYPASGHPVSQ-----PVLQQQGYIQQPSPQM--PACYCAPG----H 651
PPG QP+P G+ S H + Q P ++G PSP PA AP
Sbjct: 316 SPPGLGAQPLP--GHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF 373
Query: 652 YHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSG 711
+SS S +S + P PA Q +P+ ++ P + VS
Sbjct: 374 PYSSSSSSSAAASSSSSSSSSSASPFPAS----QALPSYPHSF-------PPPTSLSVSN 422
Query: 712 QPNSIGNQIQGVVIPYTSVPTY-QVSLPQ---GSQGIPHQTYQQPVMFPNQSNQGSMPTT 767
QP P Y Q SLP SQG P ++ + ++ G P +
Sbjct: 423 QP-----------------PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Query: 768 GMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--- 824
G Q+ V H +Q Q + QQ Q H +GPPP
Sbjct: 466 ----------TGAQSTAHPPVS-THHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 825 -----------------------------------PPGGGMVMMQLSVPNNP--QSCAHS 847
PP V + PN P S ++S
Sbjct: 515 FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNS 574
Query: 848 PPQWKQNKYYCDHQRGQKCVE-----FSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLK 902
Q Y C H + + F V + S LS+ I + A SPA K
Sbjct: 575 SSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPA-----GYK 629
Query: 903 TVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQG 954
T P GPP P R PG + P +P +PP+ G P +G
Sbjct: 630 TASPPGPP----PYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRG 675
Score = 68.9 bits (167), Expect = 2e-11
Identities = 126/518 (24%), Positives = 170/518 (32%), Gaps = 109/518 (21%)
Query: 407 GSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASP 466
G ++ SVG G H P P T +S SS GA PT + + GG N A P
Sbjct: 237 GGGAASSVGGPNGGKQH---PPPTTPISVSSSGASGAPPTKPPTTPV---GGGNLPSAPP 290
Query: 467 STSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGP----- 521
+F P +PP P +P N SP P + QP+ +P P
Sbjct: 291 PANF---PHVTPNLPP------PPALRPLNNASASP----PGLGAQPLPGHLPSPHAMGQ 337
Query: 522 -----PQPPLPAPPQQPAANHIFSQDNLG---------SQFSHMSLARQPSADGSDPHAA 567
P P P P+ + + + S S S A S+ S A+
Sbjct: 338 GMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS 397
Query: 568 MFQSTVVLQS-----PQQSGYIMTAAPPPHPPPPPPP-------PPPPPP---------L 606
F ++ L S P + ++ PP + P P PPPPPP
Sbjct: 398 PFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNA 457
Query: 607 PPGQPVPTAGYPASGHP------------------VSQPVLQQQGYIQQPSPQMPACYCA 648
PG P+ G ++ HP Q QQQ + P P +
Sbjct: 458 HPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPH 517
Query: 649 P---GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQS 705
P G H + P Y PS+ L P PA + P+ Q +Y P S
Sbjct: 518 PLEGGSSHHAHP-YAMSPSL---GSLRPYPPGPA----HLPPPHSQVSYSQAGPNGPPVS 569
Query: 706 QSLVSGQPNSIGNQ----------IQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMF 755
S S S G+ QG P+ VPT S S I P +
Sbjct: 570 SSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIA-TVASSPAGY 628
Query: 756 PNQSNQGSMP----TTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQ 811
S G P Y + PPG + S PG + T+ P
Sbjct: 629 KTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPG-----YRGTSPPAGPG 683
Query: 812 QLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPP 849
+ T GP P P G + S+P P + A PP
Sbjct: 684 TFKPGSPTVGPGPLPPAGPSGLP-SLPPPPAAPASGPP 720
Score = 46.2 bits (108), Expect = 2e-04
Identities = 59/246 (23%), Positives = 86/246 (34%), Gaps = 43/246 (17%)
Query: 481 PPGSILINP---QTGQPFINPDGSPVVYNPPMTQQPVRSQVP----GPPQPPLPAP-PQQ 532
PPG + P Q P+G PV + + + P P Q P AP P
Sbjct: 543 PPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 533 PAANHIFSQDNLGSQFSHMSLA----RQPSADGSDPHAAMFQSTVVLQSPQQSGY----- 583
P S L + + ++ + + S G P+ S ++ GY
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSP 662
Query: 584 --IMTAAPPPHPPPPPPPPPP----------PPPLPPGQPV------PTAGYPASGHPVS 625
T PP + PP P P PLPP P P PASG P+S
Sbjct: 663 PSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS 722
Query: 626 QPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVP-----SVHYNSHLNQPLPQPAQ 680
++Q+ + +P+ P P S P+ VP S +N HL++ A+
Sbjct: 723 ATQIKQEPAEEYETPESPV---PPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCAR 779
Query: 681 QTGYQV 686
Y V
Sbjct: 780 SDLYFV 785
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 69.3 bits (168), Expect = 2e-11
Identities = 179/772 (23%), Positives = 260/772 (33%), Gaps = 187/772 (24%)
Query: 268 NQMRIRLKDDRRSKSIEEREEEYQRARDR-----IFSQDSLCSQENYIIDK-RLQDEDAS 321
N+ + ++ R+ ++ REE R R S D + K R+++
Sbjct: 6 NKDSMSMRSGRKKEAPGPREELRSRGRASPGGVSTSSSDGKAEKSRQTAKKARVEEASTP 65
Query: 322 STQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASS 381
++ + +++ S + ++ TE EL PRP S +D DS
Sbjct: 66 KVNKQGRSEEISESESEETNAPKKTKTEQEL----PRPQSPSDLDS-------------- 107
Query: 382 FSGISVLTRGDSSGSSKSIGRLSKTGSES---SGSVGSSTGSLSHIQQPLPGTALSQSSH 438
G S+ D S + I + +++ S S GSV + + S S + Q ++ H
Sbjct: 108 LDGRSL--NDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQ-----GPARPYH 160
Query: 439 GAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPG-SILINPQTGQPFIN 497
P+ P+ S P SF P + P G + P T + F
Sbjct: 161 PPPLFPPSPQPPDSTP---------RQPEASFEPHP---SVTPTGYHAPMEPPTSRMFQA 208
Query: 498 PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQ---DNLGSQFSHMSLA 554
P G+P PP Q PG L PP P S N G Q +
Sbjct: 209 PPGAP----PPHPQL-----YPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 555 RQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPL-------- 606
S+ G A+ T +P G + +A PP + P P PPPP L
Sbjct: 260 ISVSSSG----ASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 607 -PPG---QPVPTAGYPASGHPVSQ-----PVLQQQGYIQQPSPQM--PACYCAPG----H 651
PPG QP+P G+ S H + Q P ++G PSP PA AP
Sbjct: 316 SPPGLGAQPLP--GHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRF 373
Query: 652 YHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSG 711
+SS S +S + P PA Q +P+ ++ P + VS
Sbjct: 374 PYSSSSSSSAAASSSSSSSSSSASPFPAS----QALPSYPHSF-------PPPTSLSVSN 422
Query: 712 QPNSIGNQIQGVVIPYTSVPTY-QVSLPQ---GSQGIPHQTYQQPVMFPNQSNQGSMPTT 767
QP P Y Q SLP SQG P ++ + ++ G P +
Sbjct: 423 QP-----------------PKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPS 465
Query: 768 GMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--- 824
G Q+ V H +Q Q + QQ Q H +GPPP
Sbjct: 466 ----------TGAQSTAHPPVS-THHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA 514
Query: 825 -----------------------------------PPGGGMVMMQLSVPNNP--QSCAHS 847
PP V + PN P S ++S
Sbjct: 515 FPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNS 574
Query: 848 PPQWKQNKYYCDHQRGQKCVE-----FSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLK 902
Q Y C H + + F V + S LS+ I + A SPA K
Sbjct: 575 SSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPA-----GYK 629
Query: 903 TVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQG 954
T P GPP P R PG + P +P +PP+ G P +G
Sbjct: 630 TASPPGPP----PYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRG 675
Score = 68.9 bits (167), Expect = 2e-11
Identities = 126/518 (24%), Positives = 170/518 (32%), Gaps = 109/518 (21%)
Query: 407 GSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASP 466
G ++ SVG G H P P T +S SS GA PT + + GG N A P
Sbjct: 237 GGGAASSVGGPNGGKQH---PPPTTPISVSSSGASGAPPTKPPTTPV---GGGNLPSAPP 290
Query: 467 STSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGP----- 521
+F P +PP P +P N SP P + QP+ +P P
Sbjct: 291 PANF---PHVTPNLPP------PPALRPLNNASASP----PGLGAQPLPGHLPSPHAMGQ 337
Query: 522 -----PQPPLPAPPQQPAANHIFSQDNLG---------SQFSHMSLARQPSADGSDPHAA 567
P P P P+ + + + S S S A S+ S A+
Sbjct: 338 GMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS 397
Query: 568 MFQSTVVLQS-----PQQSGYIMTAAPPPHPPPPPPP-------PPPPPP---------L 606
F ++ L S P + ++ PP + P P PPPPPP
Sbjct: 398 PFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNA 457
Query: 607 PPGQPVPTAGYPASGHP------------------VSQPVLQQQGYIQQPSPQMPACYCA 648
PG P+ G ++ HP Q QQQ + P P +
Sbjct: 458 HPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPH 517
Query: 649 P---GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQS 705
P G H + P Y PS+ L P PA + P+ Q +Y P S
Sbjct: 518 PLEGGSSHHAHP-YAMSPSL---GSLRPYPPGPA----HLPPPHSQVSYSQAGPNGPPVS 569
Query: 706 QSLVSGQPNSIGNQ----------IQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMF 755
S S S G+ QG P+ VPT S S I P +
Sbjct: 570 SSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIA-TVASSPAGY 628
Query: 756 PNQSNQGSMP----TTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQ 811
S G P Y + PPG + S PG + T+ P
Sbjct: 629 KTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPG-----YRGTSPPAGPG 683
Query: 812 QLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPP 849
+ T GP P P G + S+P P + A PP
Sbjct: 684 TFKPGSPTVGPGPLPPAGPSGLP-SLPPPPAAPASGPP 720
Score = 46.2 bits (108), Expect = 2e-04
Identities = 59/246 (23%), Positives = 86/246 (34%), Gaps = 43/246 (17%)
Query: 481 PPGSILINP---QTGQPFINPDGSPVVYNPPMTQQPVRSQVP----GPPQPPLPAP-PQQ 532
PPG + P Q P+G PV + + + P P Q P AP P
Sbjct: 543 PPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFP 602
Query: 533 PAANHIFSQDNLGSQFSHMSLA----RQPSADGSDPHAAMFQSTVVLQSPQQSGY----- 583
P S L + + ++ + + S G P+ S ++ GY
Sbjct: 603 PVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSP 662
Query: 584 --IMTAAPPPHPPPPPPPPPP----------PPPLPPGQPV------PTAGYPASGHPVS 625
T PP + PP P P PLPP P P PASG P+S
Sbjct: 663 PSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLS 722
Query: 626 QPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVP-----SVHYNSHLNQPLPQPAQ 680
++Q+ + +P+ P P S P+ VP S +N HL++ A+
Sbjct: 723 ATQIKQEPAEEYETPESPV---PPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCAR 779
Query: 681 QTGYQV 686
Y V
Sbjct: 780 SDLYFV 785
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 67.8 bits (164), Expect = 5e-11
Identities = 113/470 (24%), Positives = 155/470 (32%), Gaps = 92/470 (19%)
Query: 532 QPAANHIFSQD-NLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTA--- 587
Q + +FS+ G+Q S AR S + + S V SPQ I+T
Sbjct: 570 QSIVSSVFSEAWKRGTQLEESSKARMESMNRP------YTSLVPPLSPQPK--IVTPYTA 621
Query: 588 ---APPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYI---QQPSPQ 641
+PP PPPPPPPPPPPPP PP P+P+ P++G + P+ + I Q S
Sbjct: 622 SQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGS--AAPMFVKYSTITRLQNASQH 679
Query: 642 MPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQ 701
A + P +P V N + P P P T + +
Sbjct: 680 SGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKP------APC 733
Query: 702 QPQSQSLVSGQPNSIGNQIQGV--VIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQS 759
P + P +Q+Q + V P T P + P Q P P P +
Sbjct: 734 APSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPA--PTST 791
Query: 760 NQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCT 819
T PV PP + P +Q FP + P S
Sbjct: 792 K------TVAPVVTQAAPPTPTPPVP--------PAKKQPAFPASYIPPS---------- 827
Query: 820 AGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIV-QH 878
PP PP + + ++P CA PP S V ++V Q
Sbjct: 828 --PPTPP---VPVPPPTLPKQQSFCAKPPPS-----------------PLSPVPSVVKQI 865
Query: 879 SPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPL---------SIMPQFSRPFVPGQGDSR 929
+ Q P PA P + V P PP S +P S F P +S
Sbjct: 866 ASQFPPPPTPPAMESQPLK-PVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESS 924
Query: 930 Y-----PLLGQPLQYNPPAVLHGHIPNQQGQPGSRHGNRGRRQAKKAAST 974
P P PP P++ G PG + KK T
Sbjct: 925 LVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPT 974
Score = 62.4 bits (150), Expect = 2e-09
Identities = 175/798 (21%), Positives = 266/798 (33%), Gaps = 187/798 (23%)
Query: 154 HEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLD 213
HE LV L N RD L + I +K+ + LL + D
Sbjct: 330 HENLVENLLNWTRDSQNKLIFMERI-----------EKYALFKNPQNYLLGKKETAEMAD 378
Query: 214 HNVDQSGKSVIVNKT---SNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKDDNQM 270
N K V++ + S+ +P+ + +KDD + ++KRY L R + + +
Sbjct: 379 RN-----KEVLLEECFCGSSVTVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKA 433
Query: 271 RIRLK-------DDRRSKSIEEREEEYQRARDR--IFSQDSLCSQENYIIDKRLQDEDAS 321
++ D ++ +Y+ D + + + YI K L +D
Sbjct: 434 KVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYI--KYLCCDDVR 491
Query: 322 STQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASS 381
+ Q R+ K N ++ E Y W+S S S + SS
Sbjct: 492 TLHQWVNGIRIAKYGKQLYMNYQEALKRTESAYD----WTSLSSSS--------IKSGSS 539
Query: 382 FSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAP 441
S I S+ S + G S S+ SS S + + GT L +SS
Sbjct: 540 SSSIPESQSNHSNQSDSGVSDTQPAGHVRSQSIVSSVFSEAWKR----GTQLEESSKAR- 594
Query: 442 VVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGS 501
+E+ P S L+ P + QP I +
Sbjct: 595 ---------------------------------MESMNRPYTS-LVPPLSPQPKIVTPYT 620
Query: 502 PVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADG 561
+PP+ P P PP PP P P +A S + ++S ++ + +
Sbjct: 621 ASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQ----NA 676
Query: 562 SDPHAAMFQ--STVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPA 619
S A+F+ + V+QS I+ PP+ PPPPPPPPPP P
Sbjct: 677 SQHSGALFKPPTPPVMQSQSVKPQILV---PPNGVVPPPPPPPPPPTP------------ 721
Query: 620 SGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQ---PLP 676
G ++Q +P+P CAP S P P +H H+ Q P P
Sbjct: 722 -GSAMAQ---------LKPAP------CAPSLPQFSAPP--PPLKIHQVQHITQVAPPTP 763
Query: 677 QPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVS 736
P + P Q + +V + P S V+ V+ + PT
Sbjct: 764 PPPPPIPAPLPP--QAPPKPLVTIPAPTSTKTVA------------PVVTQAAPPTPTPP 809
Query: 737 LPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGS 796
+P +QP FP S PT +PV +P Q + P S
Sbjct: 810 VPPAK--------KQPA-FPASYIPPSPPTPPVPVPPPTLPKQQS-------FCAKPPPS 853
Query: 797 EQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLS-VPNN--PQS--CAHSPPQW 851
P +SQ PPPP M L VP N PQS + P+W
Sbjct: 854 PLSPVPSVVKQIASQ---------FPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKW 904
Query: 852 KQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPL 911
+ + + S D P+ S P SP PA P PP
Sbjct: 905 QPSS-----------IPVPSPD-FPPPPPESSLVFPPPPPSPVPAP--------PPPPPP 944
Query: 912 SIMPQFSRPFVPGQGDSR 929
+ P + PG+ S+
Sbjct: 945 TASPTPDKSGSPGKKTSK 962
Score = 55.5 bits (132), Expect = 3e-07
Identities = 97/393 (24%), Positives = 136/393 (34%), Gaps = 63/393 (16%)
Query: 474 PLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPV--RSQVP-GPPQPPLPAPP 530
PL P + + P Q P +P V PP +QP S +P PP PP+P PP
Sbjct: 781 PLVTIPAPTSTKTVAPVVTQA-APPTPTPPV--PPAKKQPAFPASYIPPSPPTPPVPVPP 837
Query: 531 QQPAANHIFSQDNLGSQFSHM-SLARQ----------PSADGSDPHAAMFQSTVVLQSPQ 579
F S S + S+ +Q P A S P + + V QSP
Sbjct: 838 PTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPV-PANVAPQSPP 896
Query: 580 --------QSGYIMTAAPPPHPPPP------PPPPPPPPPLPPGQPVPTAG--YPASGHP 623
Q I +P PPPP PPPPP P P PP P PTA SG P
Sbjct: 897 AVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSP 956
Query: 624 --VSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRP---------VPSVHYNSHLN 672
+ G P+PQ + + +P+ RP P S
Sbjct: 957 GKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPK-RPSVDSLVSKFTPPAESGSPSK 1015
Query: 673 QPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPT 732
+ LP PA + N G++ Q VS + + + + V+ + S P+
Sbjct: 1016 ETLPPPAAPPKPGKLNLSGVNLPGVL------QQGCVSAKAPVLSGRGKDSVVEFPSPPS 1069
Query: 733 -YQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVI-----PPGQQNNLSS 786
P +P + P +F ++ P +S + PP + +
Sbjct: 1070 DSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQWSKMSVKKAPPPTRPKRND 1129
Query: 787 SVGYLQHPGSEQVQFPRT-----TSPCSSQQLQ 814
S Q SEQ TSP SS +Q
Sbjct: 1130 STRLTQAEISEQPTMATVVPQVPTSPKSSLSVQ 1162
Score = 49.3 bits (116), Expect = 2e-05
Identities = 106/476 (22%), Positives = 155/476 (32%), Gaps = 97/476 (20%)
Query: 427 PLPGTALSQSSHGAP--VVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGS 484
PLP + + AP V Y T++ + S G + +P +PP
Sbjct: 648 PLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNG 707
Query: 485 ILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQP-------------------- 524
++ P P P GS + P P Q PP P
Sbjct: 708 VVPPPPPPPPPPTP-GSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPP 766
Query: 525 ---PLPAPPQQPAAN--HIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
P P PPQ P I + + + ++ A P+ P A Q
Sbjct: 767 PPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKK-------QPAF 819
Query: 580 QSGYIMTAAPPPHPPPPPPPPPPP-----------PPLPPGQPVPTAGYPASGH---PVS 625
+ YI PP PP PP P PPP PP P PVP+ + P +
Sbjct: 820 PASYI-----PPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPT 874
Query: 626 QPVLQQQGYIQQP---SPQMPACYCAPGHYHSSQPQYRPVPSVHY-----NSHLNQPLPQ 677
P ++ Q P +PQ P A + QP PVPS + S L P P
Sbjct: 875 PPAMESQPLKPVPANVAPQSPPAVKAKPKW---QPSSIPVPSPDFPPPPPESSLVFPPPP 931
Query: 678 PAQQTGYQVIP----NQQQNYQGIVGVQQPQSQSLVSGQP------NSIGNQIQGVVIPY 727
P+ P + + G G + ++ S +P NS G P
Sbjct: 932 PSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPE 991
Query: 728 TSVPTYQVSL----PQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNN 783
P+ + P G P + P P + + ++ +P QQ
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVL------QQGC 1045
Query: 784 LSSSVGYLQHPGSEQ-VQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVP 838
+S+ L G + V+FP SP S PPPPP + + + +P
Sbjct: 1046 VSAKAPVLSGRGKDSVVEFP---SPPSDSDF--------PPPPPETELPLPPIEIP 1090
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 67.8 bits (164), Expect = 5e-11
Identities = 67/212 (31%), Positives = 79/212 (37%), Gaps = 21/212 (9%)
Query: 479 GIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHI 538
G+PP L P P G P+ PP P S PGPPQ P PAP P A +
Sbjct: 240 GLPPRPPLPESLPPPP---PGGLPLPPMPPTGPAP--SGPPGPPQLPPPAPGVHPPAPVV 294
Query: 539 FSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPP-- 596
S + P A G P A P G + AP HPP P
Sbjct: 295 HPP---ASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPG-VHPPAPGVHPPAPGV 350
Query: 597 -PPPPPPPPPLPPGQPVPTAGYPASG---HPVSQPVLQQQGYIQQPS----PQMPACYCA 648
PP P PP P P P+AG HP + V Q + P+ PQ P +
Sbjct: 351 HPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ 410
Query: 649 PGHYHSSQPQYRP-VPSVH-YNSHLNQPLPQP 678
P H S P P P VH N ++ P P P
Sbjct: 411 PPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMP 442
Score = 46.2 bits (108), Expect = 2e-04
Identities = 69/258 (26%), Positives = 86/258 (33%), Gaps = 47/258 (18%)
Query: 527 PAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMT 586
PAPP PA + P +G P + +S L P G +
Sbjct: 218 PAPPSLPAGP------------PGVKRPPPPLMNGLPPRPPLPES---LPPPPPGGLPLP 262
Query: 587 AAPPPHPPPPPPPPPP--PPPLP-PGQPVPTAGYPASG-HPVSQPVLQQQGYIQQPSPQM 642
PP P P PP PP PPP P P P PASG HP + V + P
Sbjct: 263 PMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPP---- 318
Query: 643 PACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQ 702
APG + + + P P VH + P P P V P + GV
Sbjct: 319 -----APGVHPPTSGVHPPAPGVHPPAPGVHP-PAPG------VHPPAPGVHPPAPGVHP 366
Query: 703 PQSQSLVSGQPN------SIGNQIQGVVIP----YTSVPTYQVSLPQGSQGIPHQTYQQP 752
P S + P ++ Q GV P + P P P Q P
Sbjct: 367 PPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP 426
Query: 753 VMFPNQSNQGSMPTTGMP 770
+ P SN G P T MP
Sbjct: 427 GVHP--SNPGVHPPTPMP 442
Score = 37.7 bits (86), Expect = 0.060
Identities = 49/176 (27%), Positives = 63/176 (35%), Gaps = 38/176 (21%)
Query: 473 LPLEAAGI-PPGSILINPQTG----QPFINPDG------SPVVYNPPMTQQP----VRSQ 517
LP A G+ PP ++ P +G P ++P +P V+ P P V
Sbjct: 280 LPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPP 339
Query: 518 VPG--PPQPPL--PAPPQQPAANHIFSQDNLGSQFSHMSL-----ARQPSADGSDPHAAM 568
PG PP P + PAP P A + + G + A P A G P A
Sbjct: 340 APGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG 399
Query: 569 FQSTVVLQSPQQSGYIMTAAPPPHPPPP-------------PPPPPPPPPLPPGQP 611
PQ G + +AP HP PP P PP PPLP P
Sbjct: 400 MHPQAPGVHPQPPG-VHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGP 454
Score = 31.2 bits (69), Expect = 5.6
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 479 GIPPGSILINPQT-GQPFINPDGSPVVYNPPMTQQPVRSQVPG--PPQPP 525
G+ P + ++PQ G NP P PPM + P+ S+ PG PP PP
Sbjct: 413 GVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 67.0 bits (162), Expect = 9e-11
Identities = 124/520 (23%), Positives = 178/520 (34%), Gaps = 116/520 (22%)
Query: 507 PPMTQQPVRSQVPG-------PPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSA 559
PP+ PV +PG PP PP+P PP PA ++ Q Q+ H L Q
Sbjct: 84 PPLPPPPV---MPGGGYGDWQPPPPPMP-PPPGPALSYQKQQ-----QYKHQMLHHQ--R 132
Query: 560 DGSDPHAAMFQSTVVLQSPQQSGYIMTAA----PPPHPPPP-PPPPPPPPPLPPGQPVPT 614
DG M + P G M + PPP PPP PP P LPP QP P+
Sbjct: 133 DGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPS 192
Query: 615 AGYPASGHPVSQPVL-----QQQGYIQQPSPQMPACYCAP-----GHYHS--------SQ 656
P+ + P Q Y+ +P+ +P GH S S
Sbjct: 193 QSPPSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSA 252
Query: 657 P-------QYRPVPSVHYNSHLNQ----PLPQPAQQTGYQVIPNQQQNY---QGIVGVQQ 702
P Q P+ S N Q P P P+ T P +QQ Y Q ++ +QQ
Sbjct: 253 PPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMT-----PQEQQQYWYRQHLLSLQQ 307
Query: 703 PQSQSLVSGQPNSIGNQIQGVVIPYTSVPT-YQVSLPQGSQGIPH--QTYQQPVMFPNQS 759
L G++ VV T P +V++P SQ +P + + P+ PN+
Sbjct: 308 RTKVHLP-------GHKKGPVVAKDTPEPVKEEVTVPATSQ-VPESPSSEEPPLPPPNEE 359
Query: 760 NQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFP----RTTSPCSSQQLQG 815
+P P + L ++ + Q +V F Q LQ
Sbjct: 360 VPPPLPPE-EPQSEDPEEDARLKQLQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQ 418
Query: 816 HQCTAGPPPPPGGGMVMMQL-SVPNNPQSCAHSPPQW----------------------- 851
+Q PPP V MQL Q H +W
Sbjct: 419 YQQIIQPPPHIQTMSVDMQLRHYEMQQQQFQHLYQEWEREFQLWEEQLHSYPHKDQLQEY 478
Query: 852 -KQNKYYCDHQRG------QKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTV 904
KQ K + H + +K F ++ N + + P + +Q P P
Sbjct: 479 EKQWKTWQGHMKATQSYLQEKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPL-------- 530
Query: 905 RPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAV 944
P+ PP + P P +P + P G P PP++
Sbjct: 531 -PTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSL 569
Score = 66.6 bits (161), Expect = 1e-10
Identities = 80/311 (25%), Positives = 111/311 (35%), Gaps = 64/311 (20%)
Query: 592 HPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVS----------QPVLQQQGYIQQPSPQ 641
H PPPP PPPPP LP P P GY +S P + + L Q +QQ +
Sbjct: 13 HYPPPPVPPPPPVALPEASPGP--GYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQK 70
Query: 642 MPACYCAPGHYHSSQPQYRP---VPSVHYNSHLNQPLPQP-----------AQQTGYQVI 687
C P +H P P +P Y P P P QQ +Q++
Sbjct: 71 QMQCVLQP--HHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQML 128
Query: 688 PNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQ 747
+Q+ G+V ++ P S Q + P P+Y
Sbjct: 129 HHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYY-----------PP 177
Query: 748 TYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSP 807
T QP + P Q + P + Y P ++ SSS YL H S + ++
Sbjct: 178 TSSQPYLPPAQPSPSQSPPSQS---YLAPTPSYSSSSSSSQSYLSHSQS----YLPSSQA 230
Query: 808 CSSQQLQGH---QCTAGPPP--PPGGGMVMMQLSVPN-------NPQSCAHSP------P 849
S+ QGH Q A PPP PPG + Q + + Q A P P
Sbjct: 231 SPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTP 290
Query: 850 QWKQNKYYCDH 860
Q +Q +Y H
Sbjct: 291 QEQQQYWYRQH 301
Score = 59.3 bits (142), Expect = 2e-08
Identities = 57/194 (29%), Positives = 73/194 (37%), Gaps = 37/194 (19%)
Query: 524 PPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADG----SDPHAAMFQSTVVLQSPQ 579
PP P PP P A + + G +S + PS+ G + H A Q LQ
Sbjct: 15 PPPPVPPPPPVA---LPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQ---LQQMH 68
Query: 580 QSGYIMTAAPPPHPPPPPPPP------------PPPPPLPPGQPVPTAGYPASGHPVSQP 627
Q P PPPP PPP PPPPP+PP P P Y Q
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPP-PPGPALSYQKQQQYKHQM 127
Query: 628 VLQQQ----GYI-------QQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLP 676
+ Q+ G + + P P Y P + PQ P PS +Y +QP
Sbjct: 128 LHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQ--PPPS-YYPPTSSQPYL 184
Query: 677 QPAQQTGYQVIPNQ 690
PAQ + Q P+Q
Sbjct: 185 PPAQPSPSQSPPSQ 198
Score = 51.6 bits (122), Expect = 4e-06
Identities = 57/218 (26%), Positives = 70/218 (32%), Gaps = 20/218 (9%)
Query: 502 PVVYNPPMTQQPVRSQVPGPPQPP-LPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSAD 560
P + P P +P P PP LP P PA + SL
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPP 576
Query: 561 GSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPP------PPPPPPPPPL-----PPG 609
G P + VL P S +A PPP PPP PPP P PPL PPG
Sbjct: 577 GMPPSLSSAGPPPVLPPPSLS----SAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPG 632
Query: 610 QPVP--TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQP--QYRPVPSV 665
P P G P P Q P PA P + S+ P + P+ S
Sbjct: 633 IPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSA 692
Query: 666 HYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQP 703
+ +N P Y + Q + QP
Sbjct: 693 GPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQP 730
Score = 50.1 bits (118), Expect = 1e-05
Identities = 77/304 (25%), Positives = 109/304 (35%), Gaps = 52/304 (17%)
Query: 474 PLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLP--APPQ 531
P E+ +PPGS + Q+ P P P Y PP + QP PP P P +PP
Sbjct: 146 PPESPPVPPGSYMPPSQSYMP---PPQPPPSYYPPTSSQPYL-----PPAQPSPSQSPPS 197
Query: 532 Q----PAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTA 587
Q P ++ S + S SH S + PS+ S + S L +P
Sbjct: 198 QSYLAPTPSYSSSSSSSQSYLSH-SQSYLPSSQASPSRPSQGHSKSQLLAP--------- 247
Query: 588 APPPHPPPPPPPPPPPPPLPPG-QPVPTAGYPASGHP---VSQPVLQQQGYIQQP--SPQ 641
PPP PP PL G + T A+ P P QQQ + +Q S Q
Sbjct: 248 -PPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQ 306
Query: 642 MPACYCAPGHYHS---------------SQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQV 686
PGH + P VP S PLP P ++ +
Sbjct: 307 QRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQVP--ESPSSEEPPLPPPNEEVPPPL 364
Query: 687 IPNQQQNYQGIVGVQQPQSQSLVS----GQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQ 742
P + Q+ + Q Q+ + Q + +G Q QG++ +T + Q Q
Sbjct: 365 PPEEPQSEDPEEDARLKQLQAAAAHWQQHQQHRVGFQYQGIMQKHTQLQQILQQYQQIIQ 424
Query: 743 GIPH 746
PH
Sbjct: 425 PPPH 428
Score = 48.5 bits (114), Expect = 3e-05
Identities = 48/155 (30%), Positives = 60/155 (38%), Gaps = 29/155 (18%)
Query: 481 PPGSILINPQTGQP---FINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANH 537
PPGS P G+P + P P + P+T+ PV P PP P P PP
Sbjct: 1508 PPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTS 1567
Query: 538 IFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPP 597
Q+ + S L G + + F+S TAA P P PP
Sbjct: 1568 AVEQER-WDEDSFYGLWDTNDEQGLN---SEFKSE-------------TAAIPSAPVLPP 1610
Query: 598 PPP----PPPPPLPPGQPVPTAGYPASGHPVSQPV 628
PP PPP P+P G P P + P PV Q V
Sbjct: 1611 PPVHSSIPPPGPVPMGMP-PMSKPP----PVQQTV 1640
Score = 47.0 bits (110), Expect = 1e-04
Identities = 49/171 (28%), Positives = 64/171 (37%), Gaps = 24/171 (14%)
Query: 522 PQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQS 581
PQ PPQ+ + S+ + + R P G P + + S P +S
Sbjct: 1483 PQMADHLPPQESRLQNTSSRPGM---YPPPGSYRPPPPMGKPPGSIVRPSA----PPARS 1535
Query: 582 GYIMTAAPPPHPPPPPPPP-PPPPPL--PPGQPVPTAGYPASGHPVSQPVLQQQGYIQQP 638
+T P P PPPPPPPP PPPPP+ P V + +QG +
Sbjct: 1536 SVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEF 1595
Query: 639 SPQMPACYCA----PGHYHSSQPQYRPVPSVHYNSHLNQP---LPQPAQQT 682
+ A A P HSS P PVP + P P P QQT
Sbjct: 1596 KSETAAIPSAPVLPPPPVHSSIPPPGPVP-------MGMPPMSKPPPVQQT 1639
Score = 43.1 bits (100), Expect = 0.001
Identities = 99/393 (25%), Positives = 137/393 (34%), Gaps = 81/393 (20%)
Query: 427 PLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSIL 486
P PG S SS G P V P S S+ G + PS S P +PP
Sbjct: 574 PPPGMPPSLSSAGPPPVLPPPSLSSA-----GPPPVLPPPSLS-STAPPPVMPLPP---- 623
Query: 487 INPQTGQPFINPDGSPVVYNPPMTQQPV-------RSQVPGPPQP---PLPA-------- 528
++ T P I P G P P +T PV SQVP P+P P P
Sbjct: 624 LSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPT 683
Query: 529 ---PPQQPA--ANHIFSQDNLG------SQFSHMSLARQPSADGSDPHAAM----FQSTV 573
PP Q A + + S+ L S FS + SA S P A+ +S
Sbjct: 684 TYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAVKDMPVRSGG 743
Query: 574 VLQSPQQSGYIMTAAPPPHPPP------------PPPPPPPPPPLPPGQPVPT-AGYPAS 620
+L P +S Y+ + P P P P P P P P G+PA
Sbjct: 744 LLPDPPRSSYLESPRGPRFDGPRRFEDLGSRCEGPRPKGPRFEGNRPDGPRPRYEGHPAE 803
Query: 621 GHPVSQPVLQQ----QGYI--------QQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYN 668
G ++ + Q YI +Q PQ A G H QP+ + P
Sbjct: 804 GTKSKWGMIPRGPASQFYITPSTSLSPRQSGPQWKGPKPAFGQQHQQQPKSQAEPLSGNK 863
Query: 669 SHL-----NQPLPQPAQQTGYQVIPNQQ-----QNYQGIVGVQQPQSQSLVSGQPNSIGN 718
L NQ Q + + + + Q+ + + QQ +S VS P N
Sbjct: 864 EPLADTSSNQQKNFKMQSAAFSIAADVKDVKAAQSNENLSDSQQEPPKSEVSEGPVEPSN 923
Query: 719 QIQGVVIPYTSVPTYQV---SLPQGSQGIPHQT 748
Q V T + Q +P ++ +P Q+
Sbjct: 924 WDQNVQSMETQIDKAQAVTQPVPLANKPVPAQS 956
>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
Length = 1044
Score = 67.0 bits (162), Expect = 9e-11
Identities = 116/474 (24%), Positives = 156/474 (32%), Gaps = 94/474 (19%)
Query: 520 GPPQPPLPAPPQ--QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQS 577
GP QPP P P Q P I +D +A Q +P+A F T L S
Sbjct: 620 GPEQPPPPCPSQTGSPPVGLIKGEDK-----DEGPVAEQVKKSTLNPNAKEFNPTKPLLS 674
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
+S P P P P PV TAG P Q YI Q
Sbjct: 675 VNKS------------TSTPTSPGPRTHSTPSIPVLTAGQSGLYSP------QYISYIPQ 716
Query: 638 ----PSPQMPACYCAP---------GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
P+ Q P Y P G Y ++ P S + P+ Q A G
Sbjct: 717 IHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGP 776
Query: 685 QV---------IPNQQQNYQGIVGVQQPQSQ--------SLVSGQPNSI--GNQIQGVVI 725
+ IP Q + G + QP + ++ P + G+ Q +V
Sbjct: 777 PLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVS 836
Query: 726 PYT-SVPTYQVSLPQGSQGIPHQTYQQPV--MFPNQSNQGSMPTTGMPVYYSVIPPGQQN 782
T P+ + PQ HQ+Y + +Q + PT P P Q+
Sbjct: 837 SSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQH 896
Query: 783 NLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--PPGGGMVMMQLSVPNN 840
G H GS Q Q Q L G PP PPG +
Sbjct: 897 Q----AGQAPHLGSGQPQ----------QNLYHPGALTGTPPSLPPGPSA--------QS 934
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQ--SPAPAQL 898
PQS P Y HQ Q F+++ ++ Q Q P +P P Q+
Sbjct: 935 PQSSFPQPAA----VYAIHHQ--QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQV 988
Query: 899 STLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQP-LQYNPPAVLHGHIP 950
L + GPP +PQ P + S YP +G P +Q +P L H P
Sbjct: 989 MLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQVQSHPSQQLPFHPP 1042
Score = 53.9 bits (128), Expect = 8e-07
Identities = 68/252 (26%), Positives = 94/252 (37%), Gaps = 46/252 (18%)
Query: 402 RLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNG 461
R+ +GS V SST +QP P AL + H + YP +T L+
Sbjct: 823 RMLTSGSHPQAIVSSSTPQYPSAEQPTP-QALYATVHQS---YPHHATQ--------LHA 870
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPV--VYNPPMTQQPVRSQVP 519
P+T+ ++ P + Q GQ G P +Y+P S P
Sbjct: 871 HQPQPATTPTGSQPQSQHAAPSPV--QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPP 928
Query: 520 GPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
GP + QPAA + L F++M+ V Q+
Sbjct: 929 GPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAH--------------------VTQAHV 968
Query: 580 QSGYIMTAAPPPHPPPPPPP------PPPPPPLPPGQPVPTAGYPA--SGHPVSQPVLQQ 631
Q+G +TAAPPPHP P PP PP PP VP +G PA + P P +
Sbjct: 969 QTG--ITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGH 1026
Query: 632 QGYIQQPSPQMP 643
PS Q+P
Sbjct: 1027 PQVQSHPSQQLP 1038
Score = 44.3 bits (103), Expect = 6e-04
Identities = 98/412 (23%), Positives = 135/412 (32%), Gaps = 76/412 (18%)
Query: 404 SKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQV 463
S+TGS G + + + + + L+ ++ P +S + S S +
Sbjct: 630 SQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRT 689
Query: 464 ASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG--- 520
S + +P+ AG S L +PQ P V P M PV + VPG
Sbjct: 690 HSTPS----IPVLTAG---QSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQG 742
Query: 521 ---------PPQ-----PPLPAPPQQPAA----NHIFSQDNLGS-------QFSHMSLAR 555
PPQ P APP AA + + S QF
Sbjct: 743 KYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMM 802
Query: 556 QPSAD-GSDP-HAAMFQSTV-VLQSPQQSGYIMTAAPPPHPPPPPPPPPP---------- 602
QP A S P A M QS +L S I++++ P +P P P
Sbjct: 803 QPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYP 862
Query: 603 --PPPLPPGQP----VPTAGYPASGHPVSQPVLQQQG---YIQQPSPQMPACYCAPGHYH 653
L QP PT P S H PV Q G ++ PQ + PG
Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT 920
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPN---------QQQNYQGIVGVQQPQ 704
+ P P PS + + P P +Q +P+ Q GI P
Sbjct: 921 GTPPSLPPGPSAQ-SPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPH 979
Query: 705 ------SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQ 750
Q ++ P S G QG V P + VP S P I H Q
Sbjct: 980 PGAPHPPQVMLLHPPQSHGGPPQGAV-PQSGVPALSASTPSPYPYIGHPQVQ 1030
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 66.2 bits (160), Expect = 2e-10
Identities = 113/465 (24%), Positives = 151/465 (32%), Gaps = 93/465 (20%)
Query: 520 GPPQPPLPAPPQ--QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQS 577
GP QPP P P Q P I +D +A Q +P+A F T L S
Sbjct: 620 GPEQPPPPCPSQTGSPPVGLIKGEDK-----DEGPVAEQVKKSTLNPNAKEFNPTKPLLS 674
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
+S P P P P PV TAG P Q YI Q
Sbjct: 675 VNKS------------TSTPTSPGPRTHSTPSIPVLTAGQSGLYSP------QYISYIPQ 716
Query: 638 ----PSPQMPACYCAP---------GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
P+ Q P Y P G Y ++ P S + P+ Q A G
Sbjct: 717 IHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGP 776
Query: 685 QV---------IPNQQQNYQGIVGVQQPQSQ--------SLVSGQPNSI--GNQIQGVVI 725
+ IP Q + G + QP + ++ P + G+ Q +V
Sbjct: 777 PLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVS 836
Query: 726 PYT-SVPTYQVSLPQGSQGIPHQTYQQPV--MFPNQSNQGSMPTTGMPVYYSVIPPGQQN 782
T P+ + PQ HQ+Y + +Q + PT P P Q+
Sbjct: 837 SSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQH 896
Query: 783 NLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--PPGGGMVMMQLSVPNN 840
G H GS Q Q Q L G PP PPG +
Sbjct: 897 Q----AGQAPHLGSGQPQ----------QNLYHPGALTGTPPSLPPGPSA--------QS 934
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQ--SPAPAQL 898
PQS P Y HQ Q F+++ ++ Q Q P +P P Q+
Sbjct: 935 PQSSFPQPAA----VYAIHHQ--QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQV 988
Query: 899 STLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPP 942
L + GPP +PQ P + S YP +G P PP
Sbjct: 989 MLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQAPLPP 1033
Score = 51.6 bits (122), Expect = 4e-06
Identities = 67/250 (26%), Positives = 91/250 (36%), Gaps = 48/250 (19%)
Query: 402 RLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNG 461
R+ +GS V SST +QP P AL + H + YP +T L+
Sbjct: 823 RMLTSGSHPQAIVSSSTPQYPSAEQPTP-QALYATVHQS---YPHHATQ--------LHA 870
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPV--VYNPPMTQQPVRSQVP 519
P+T+ ++ P + Q GQ G P +Y+P S P
Sbjct: 871 HQPQPATTPTGSQPQSQHAAPSPV--QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPP 928
Query: 520 GPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
GP + QPAA + L F++M+ V Q+
Sbjct: 929 GPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAH--------------------VTQAHV 968
Query: 580 QSGYIMTAAPPPHPPPPPPP------PPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQG 633
Q+G +TAAPPPHP P PP PP PP VP +G PA P
Sbjct: 969 QTG--ITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSP----YP 1022
Query: 634 YIQQPSPQMP 643
YI P +P
Sbjct: 1023 YIGHPQAPLP 1032
Score = 43.9 bits (102), Expect = 8e-04
Identities = 100/420 (23%), Positives = 139/420 (33%), Gaps = 78/420 (18%)
Query: 404 SKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQV 463
S+TGS G + + + + + L+ ++ P +S + S S +
Sbjct: 630 SQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRT 689
Query: 464 ASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG--- 520
S + +P+ AG S L +PQ P V P M PV + VPG
Sbjct: 690 HSTPS----IPVLTAG---QSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQG 742
Query: 521 ---------PPQ-----PPLPAPPQQPAA----NHIFSQDNLGS-------QFSHMSLAR 555
PPQ P APP AA + + S QF
Sbjct: 743 KYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMM 802
Query: 556 QPSAD-GSDP-HAAMFQSTV-VLQSPQQSGYIMTAAPPPHPPPPPPPPPP---------- 602
QP A S P A M QS +L S I++++ P +P P P
Sbjct: 803 QPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYP 862
Query: 603 --PPPLPPGQP----VPTAGYPASGHPVSQPVLQQQG---YIQQPSPQMPACYCAPGHYH 653
L QP PT P S H PV Q G ++ PQ + PG
Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT 920
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPN---------QQQNYQGIVGVQQPQ 704
+ P P PS + + P P +Q +P+ Q GI P
Sbjct: 921 GTPPSLPPGPSAQ-SPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPH 979
Query: 705 ------SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQ 758
Q ++ P S G QG V P + VP S P I H Q P+ P +
Sbjct: 980 PGAPHPPQVMLLHPPQSHGGPPQGAV-PQSGVPALSASTPSPYPYIGHP--QAPLPPPGE 1036
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 65.5 bits (158), Expect = 3e-10
Identities = 136/544 (25%), Positives = 190/544 (34%), Gaps = 99/544 (18%)
Query: 481 PPGSIL---INPQTGQPFINPDGSPVVYNP------PMTQQPV-------RSQVPGPPQP 524
PPG+ PQT QP P SPV +P TQ P SQVP PP P
Sbjct: 1851 PPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPP 1910
Query: 525 PLPAPPQQPAANHIFSQDNLGSQFSHMSL--ARQPSADG-SDPHAAMFQSTVVLQSPQQ- 580
P P AA I + +++ + P G P + M ++ + P Q
Sbjct: 1911 AQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQV 1970
Query: 581 SGYIMTAAPP------PHPPPPPPPPPPPPPLP-------PGQPVPTAGYPASGHP---- 623
SG +M + PP P P P P P P + G +P+ P S P
Sbjct: 1971 SGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQ 2030
Query: 624 --------VSQPVLQQQGY-IQQPSPQMPACYC--APGHYHSSQPQYRPVPSVHYNSHLN 672
S P QQQ I + +PQ+ A + Y ++QP +P P + +
Sbjct: 2031 DLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGM- 2089
Query: 673 QPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPT 732
QP P QQ Q + N Q GV PQ Q++ P Q ++ P + P
Sbjct: 2090 QPQPGMHQQPSLQNL-NAMQAGVPRPGV-PPQQQAMGGLNPQ---GQALNIMNPGHN-PN 2143
Query: 733 YQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQ 792
PQ + + Q QQ Q Q QQ + + G
Sbjct: 2144 MASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQ--------------QQGSAGMAGGMAG 2189
Query: 793 HPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMM-----QLSVPNNPQSCAHS 847
H +Q Q P P QQ + Q P G M M QL P A S
Sbjct: 2190 HGQFQQPQGPGGYPPAMQQQQRMQQHL----PLQGSSMGQMAAQMGQLGQMGQPGLGADS 2245
Query: 848 PPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSP-----------------QLSSPIISPA 890
P +Q Q+ Q + S SP Q+++ + +
Sbjct: 2246 TPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQV 2305
Query: 891 QSPAPAQLSTLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHI 949
+SPAP Q ++ P S P I PQ S V Q S +P L + ++ GH+
Sbjct: 2306 RSPAPVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTM---ASSIDQGHL 2362
Query: 950 PNQQ 953
N +
Sbjct: 2363 GNPE 2366
Score = 48.1 bits (113), Expect = 4e-05
Identities = 82/377 (21%), Positives = 125/377 (33%), Gaps = 54/377 (14%)
Query: 410 SSGSVGSSTGSLSHIQQP--LPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPS 467
S GSV S S + QP + G + AP + + S G ++ + P
Sbjct: 717 SMGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPP 776
Query: 468 TSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG------- 520
+ + G PG+ L NP + P S + PP+TQ P+ P
Sbjct: 777 AQTGV----SQGQVPGAALPNPLN---MLGPQASQLPC-PPVTQSPLHPTPPPASTAAGM 828
Query: 521 -------PP--QPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQS 571
PP PP PA P QP+ + S P+ GS P A QS
Sbjct: 829 PSLQHTTPPGMTPPQPAAPTQPS-----------TPVSSSGQTPTPTP-GSVPSATQTQS 876
Query: 572 TVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQ 631
T +Q+ Q+ P P P PP + Q P P P+ Q
Sbjct: 877 TPTVQAAAQA----------QVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQA 926
Query: 632 QGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQ 691
I P + A + P PV + + P P + G +
Sbjct: 927 AASIDNRVPTPSSVASAETNSQQPGPDV-PVLEMKTETQAEDTEPDPGESKGEPRSEMME 985
Query: 692 QNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQG--SQGIPHQTY 749
++ QG V++ + +P + + V + V + S G SQ
Sbjct: 986 EDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKV---EVKEEEESSSNGTASQSTSPSQP 1042
Query: 750 QQPVMFPNQSNQGSMPT 766
++ + P + Q MPT
Sbjct: 1043 RKKIFKPEELRQALMPT 1059
Score = 45.4 bits (106), Expect = 3e-04
Identities = 92/389 (23%), Positives = 129/389 (33%), Gaps = 56/389 (14%)
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
PQQS T+APP P P P P P QP P + PA V++ +
Sbjct: 1840 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGK 1899
Query: 638 PSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGI 697
P+ Q+PA P P +V + + Q QQ Y+V N G
Sbjct: 1900 PTSQVPA---------PPPPAQPPPAAVEAARQIEREAQQ--QQHLYRVNINNSMP-PGR 1947
Query: 698 VGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPN 757
G+ P SQ NQ+ G V+P S+P P Q Q P+ P
Sbjct: 1948 TGMGTPGSQMAPVSLNVPRPNQVSGPVMP---------SMP------PGQWQQAPL--PQ 1990
Query: 758 QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQ 817
Q +P + + G P VQ PR+ SP + Q L
Sbjct: 1991 QQPMPGLPRPVISMQAQAAVAG--------------PRMPSVQPPRSISPSALQDLLR-- 2034
Query: 818 CTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNI-- 875
T P P ++ + + +NPQ A Q + KY + Q S +
Sbjct: 2035 -TLKSPSSPQQQQQVLNI-LKSNPQLMAAFIKQ-RTAKYVANQPGMQPQPGLQSQPGMQP 2091
Query: 876 ---VQHSPQLSSPIISPAQSP---APAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSR 929
+ P L + A P P Q + + P G L+IM P +
Sbjct: 2092 QPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQY 2151
Query: 930 YPLLGQPLQYNPPAVLHGHIPNQQGQPGS 958
+L + L QQ Q GS
Sbjct: 2152 REMLRRQLLQQQQQQQQQQQQQQQQQQGS 2180
Score = 44.7 bits (104), Expect = 5e-04
Identities = 117/538 (21%), Positives = 170/538 (31%), Gaps = 129/538 (23%)
Query: 507 PPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHA 566
P T P + P P P PP QP QPS P
Sbjct: 1845 PSPTSAPPGTPTQQPSTPQTPQPPAQP----------------------QPSPVSMSP-- 1880
Query: 567 AMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPP---------------------- 604
A F S Q P + T P P PPPP PPP
Sbjct: 1881 AGFPSVARTQPPTT---VSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRV 1937
Query: 605 ----PLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQ-PQY 659
+PPG+ G G ++ L Q P MP+ PG + + PQ
Sbjct: 1938 NINNSMPPGR----TGMGTPGSQMAPVSLNVPRPNQVSGPVMPS--MPPGQWQQAPLPQQ 1991
Query: 660 RPVP-------SVHYNSHLNQPLPQPAQQTGYQVIPNQQQN-YQGIVGVQQPQSQ----S 707
+P+P S+ + + P P+ Q + P+ Q+ + + PQ Q +
Sbjct: 1992 QPMPGLPRPVISMQAQAAVAGP-RMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLN 2050
Query: 708 LVSGQPNSIGNQIQGVVIPYTSVPTYQVSLP--QGSQGIPHQ--TYQQPVMFPNQSNQGS 763
++ P + I+ Y + P Q G+ Q +QQP + + Q
Sbjct: 2051 ILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAG 2110
Query: 764 MPTTGMPVY-------------YSVIPPGQQNNLSS-SVGYLQHPGSEQVQFPRTTSPCS 809
+P G+P +++ PG N++S + Y + + +Q +
Sbjct: 2111 VPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQ 2170
Query: 810 SQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDH--------- 860
QQ Q Q +AG G Q PQ PP +Q + H
Sbjct: 2171 QQQQQQQQGSAGMAGGMAGHGQFQQ------PQGPGGYPPAMQQQQRMQQHLPLQGSSMG 2224
Query: 861 ----------QRGQKCVEFSSVDNIVQ-------HSPQLSSPIISPAQSPAPAQLSTLKT 903
Q GQ + S NI Q Q+ I SP Q P +S +
Sbjct: 2225 QMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQ---PNPMSPQQH 2281
Query: 904 VRPSGPPLSIMP-QFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH 960
+ P S +P Q + Q S P+ Q PP P Q QP H
Sbjct: 2282 MLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPH--SSPSPRIQPQPSPHH 2337
Score = 41.2 bits (95), Expect = 0.005
Identities = 88/320 (27%), Positives = 118/320 (36%), Gaps = 75/320 (23%)
Query: 594 PPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ-------------GYIQQPSP 640
P P P PP +P QPV P +G P+S PV + Q G +Q P
Sbjct: 645 PALPAPGAQPPVIPQAQPV----RPPNG-PLSLPVNRMQVSQGMNSFNPMSLGNVQLPQA 699
Query: 641 QMPACYCAPGHYHSSQ-------------PQYRPVPSVHYNSHLNQPLPQ-PAQQTGYQV 686
M +P + HS Q P P P +H N + Q PAQ Q
Sbjct: 700 PMGPRAASPMN-HSVQMNSMGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQS---QF 755
Query: 687 IP-NQQQNYQGI--VGVQQPQSQSLVS-GQP---------NSIGNQIQGVVI-PYTSVPT 732
+P NQ + G VG+ QP +Q+ VS GQ N +G Q + P T P
Sbjct: 756 LPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPL 815
Query: 733 YQVSLPQG-SQGIPH-QTYQQPVMFPNQSNQGSMPTTGMPVYYS---------VIPPGQQ 781
+ P + G+P Q P M P Q + P+T PV S +P Q
Sbjct: 816 HPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPST--PVSSSGQTPTPTPGSVPSATQ 873
Query: 782 NNLSSSV-----GYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLS 836
+ +V + VQ P +P SSQQ Q T PPG + S
Sbjct: 874 TQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQ----QPTPVHAQPPGTPLSQAAAS 929
Query: 837 VPN---NPQSCAHSPPQWKQ 853
+ N P S A + +Q
Sbjct: 930 IDNRVPTPSSVASAETNSQQ 949
Score = 41.2 bits (95), Expect = 0.005
Identities = 106/478 (22%), Positives = 148/478 (30%), Gaps = 88/478 (18%)
Query: 522 PQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQS 581
PQ LP+P P +QPS + A Q + V SP
Sbjct: 1840 PQQSLPSPTSAPPGTP----------------TQQPSTPQTPQPPAQPQPSPVSMSPAGF 1883
Query: 582 GYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGY----IQQ 637
+ PP P P P PP QP P A + + + QQQ I
Sbjct: 1884 PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAA--VEAARQIEREAQQQQHLYRVNINN 1941
Query: 638 PSPQ------MPACYCAPGHYHSSQPQY--RPV-PSVHYNSHLNQPLPQPAQQTGYQVIP 688
P P AP + +P PV PS+ PLPQ G
Sbjct: 1942 SMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPV 2001
Query: 689 NQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQV-----SLPQ---- 739
Q + G + P Q S P+++ + ++ + P + QV S PQ
Sbjct: 2002 ISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAA 2061
Query: 740 -GSQGIPHQTYQQPVMFPN---QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPG 795
Q QP M P QS G P GM S LQ+
Sbjct: 2062 FIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPS----------------LQNLN 2105
Query: 796 SEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSP------- 848
+ Q PR P Q + G P G + +M + +NP + +P
Sbjct: 2106 AMQAGVPRPGVPPQQQAMGGLN-------PQGQALNIM--NPGHNPNMASMNPQYREMLR 2156
Query: 849 ----PQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTV 904
Q +Q + Q+ Q+ + H Q P PA Q ++
Sbjct: 2157 RQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHG-QFQQPQGPGGYPPAMQQQQRMQQH 2215
Query: 905 RP-----SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPG 957
P G + M Q + PG G P + Q LQ + + Q G PG
Sbjct: 2216 LPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQR--ILQQQQMKQQIGSPG 2271
Score = 40.8 bits (94), Expect = 0.007
Identities = 68/269 (25%), Positives = 91/269 (33%), Gaps = 61/269 (22%)
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINP------QTGQPFINPDG-SPVVYNPPMTQQPV 514
Q P LP+ + G NP Q Q + P SP+ ++ M
Sbjct: 661 QPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSM-- 718
Query: 515 RSQVPGPPQPP--LPAPP------------QQPAANHIFSQDNLGSQFSHMSLAR-QPSA 559
VPG P +P PP Q PA + Q+ S MS+ QP A
Sbjct: 719 -GSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPA 777
Query: 560 D-----GSDPHAAMFQSTVVLQSPQQSGYIM--TAAPPPHPPPPPP-------------- 598
G P AA+ + + + PQ S P HP PPP
Sbjct: 778 QTGVSQGQVPGAAL-PNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTP 836
Query: 599 ----PPPPPPPLPPGQPVPTAG---------YPASGHPVSQPVLQQQGYIQ-QPSPQMPA 644
PP P P P PV ++G P++ S P +Q Q P PQ P
Sbjct: 837 PGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPV 896
Query: 645 CYCAPGHYHSSQPQYRPVPSVHYNSHLNQ 673
+ SSQ Q PV + + L+Q
Sbjct: 897 QPPSVATPQSSQQQPTPVHAQPPGTPLSQ 925
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 65.5 bits (158), Expect = 3e-10
Identities = 136/544 (25%), Positives = 190/544 (34%), Gaps = 99/544 (18%)
Query: 481 PPGSIL---INPQTGQPFINPDGSPVVYNP------PMTQQPV-------RSQVPGPPQP 524
PPG+ PQT QP P SPV +P TQ P SQVP PP P
Sbjct: 1889 PPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPP 1948
Query: 525 PLPAPPQQPAANHIFSQDNLGSQFSHMSL--ARQPSADG-SDPHAAMFQSTVVLQSPQQ- 580
P P AA I + +++ + P G P + M ++ + P Q
Sbjct: 1949 AQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQV 2008
Query: 581 SGYIMTAAPP------PHPPPPPPPPPPPPPLP-------PGQPVPTAGYPASGHP---- 623
SG +M + PP P P P P P P + G +P+ P S P
Sbjct: 2009 SGPVMPSMPPGQWQQAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQ 2068
Query: 624 --------VSQPVLQQQGY-IQQPSPQMPACYC--APGHYHSSQPQYRPVPSVHYNSHLN 672
S P QQQ I + +PQ+ A + Y ++QP +P P + +
Sbjct: 2069 DLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGM- 2127
Query: 673 QPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPT 732
QP P QQ Q + N Q GV PQ Q++ P Q ++ P + P
Sbjct: 2128 QPQPGMHQQPSLQNL-NAMQAGVPRPGV-PPQQQAMGGLNPQ---GQALNIMNPGHN-PN 2181
Query: 733 YQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQ 792
PQ + + Q QQ Q Q QQ + + G
Sbjct: 2182 MASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQ--------------QQGSAGMAGGMAG 2227
Query: 793 HPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMM-----QLSVPNNPQSCAHS 847
H +Q Q P P QQ + Q P G M M QL P A S
Sbjct: 2228 HGQFQQPQGPGGYPPAMQQQQRMQQHL----PLQGSSMGQMAAQMGQLGQMGQPGLGADS 2283
Query: 848 PPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSP-----------------QLSSPIISPA 890
P +Q Q+ Q + S SP Q+++ + +
Sbjct: 2284 TPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQV 2343
Query: 891 QSPAPAQLSTLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHI 949
+SPAP Q ++ P S P I PQ S V Q S +P L + ++ GH+
Sbjct: 2344 RSPAPVQSPRPQSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTM---ASSIDQGHL 2400
Query: 950 PNQQ 953
N +
Sbjct: 2401 GNPE 2404
Score = 48.1 bits (113), Expect = 4e-05
Identities = 82/377 (21%), Positives = 125/377 (33%), Gaps = 54/377 (14%)
Query: 410 SSGSVGSSTGSLSHIQQP--LPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPS 467
S GSV S S + QP + G + AP + + S G ++ + P
Sbjct: 755 SMGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPP 814
Query: 468 TSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG------- 520
+ + G PG+ L NP + P S + PP+TQ P+ P
Sbjct: 815 AQTGV----SQGQVPGAALPNPLN---MLGPQASQLPC-PPVTQSPLHPTPPPASTAAGM 866
Query: 521 -------PP--QPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQS 571
PP PP PA P QP+ + S P+ GS P A QS
Sbjct: 867 PSLQHTTPPGMTPPQPAAPTQPS-----------TPVSSSGQTPTPTP-GSVPSATQTQS 914
Query: 572 TVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQ 631
T +Q+ Q+ P P P PP + Q P P P+ Q
Sbjct: 915 TPTVQAAAQA----------QVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQA 964
Query: 632 QGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQ 691
I P + A + P PV + + P P + G +
Sbjct: 965 AASIDNRVPTPSSVASAETNSQQPGPDV-PVLEMKTETQAEDTEPDPGESKGEPRSEMME 1023
Query: 692 QNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQG--SQGIPHQTY 749
++ QG V++ + +P + + V + V + S G SQ
Sbjct: 1024 EDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKV---EVKEEEESSSNGTASQSTSPSQP 1080
Query: 750 QQPVMFPNQSNQGSMPT 766
++ + P + Q MPT
Sbjct: 1081 RKKIFKPEELRQALMPT 1097
Score = 45.4 bits (106), Expect = 3e-04
Identities = 92/389 (23%), Positives = 129/389 (33%), Gaps = 56/389 (14%)
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
PQQS T+APP P P P P P QP P + PA V++ +
Sbjct: 1878 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGK 1937
Query: 638 PSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGI 697
P+ Q+PA P P +V + + Q QQ Y+V N G
Sbjct: 1938 PTSQVPA---------PPPPAQPPPAAVEAARQIEREAQQ--QQHLYRVNINNSMP-PGR 1985
Query: 698 VGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPN 757
G+ P SQ NQ+ G V+P S+P P Q Q P+ P
Sbjct: 1986 TGMGTPGSQMAPVSLNVPRPNQVSGPVMP---------SMP------PGQWQQAPL--PQ 2028
Query: 758 QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQ 817
Q +P + + G P VQ PR+ SP + Q L
Sbjct: 2029 QQPMPGLPRPVISMQAQAAVAG--------------PRMPSVQPPRSISPSALQDLLR-- 2072
Query: 818 CTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNI-- 875
T P P ++ + + +NPQ A Q + KY + Q S +
Sbjct: 2073 -TLKSPSSPQQQQQVLNI-LKSNPQLMAAFIKQ-RTAKYVANQPGMQPQPGLQSQPGMQP 2129
Query: 876 ---VQHSPQLSSPIISPAQSP---APAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSR 929
+ P L + A P P Q + + P G L+IM P +
Sbjct: 2130 QPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQY 2189
Query: 930 YPLLGQPLQYNPPAVLHGHIPNQQGQPGS 958
+L + L QQ Q GS
Sbjct: 2190 REMLRRQLLQQQQQQQQQQQQQQQQQQGS 2218
Score = 44.7 bits (104), Expect = 5e-04
Identities = 117/538 (21%), Positives = 170/538 (31%), Gaps = 129/538 (23%)
Query: 507 PPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHA 566
P T P + P P P PP QP QPS P
Sbjct: 1883 PSPTSAPPGTPTQQPSTPQTPQPPAQP----------------------QPSPVSMSP-- 1918
Query: 567 AMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPP---------------------- 604
A F S Q P + T P P PPPP PPP
Sbjct: 1919 AGFPSVARTQPPTT---VSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRV 1975
Query: 605 ----PLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQ-PQY 659
+PPG+ G G ++ L Q P MP+ PG + + PQ
Sbjct: 1976 NINNSMPPGR----TGMGTPGSQMAPVSLNVPRPNQVSGPVMPS--MPPGQWQQAPLPQQ 2029
Query: 660 RPVP-------SVHYNSHLNQPLPQPAQQTGYQVIPNQQQN-YQGIVGVQQPQSQ----S 707
+P+P S+ + + P P+ Q + P+ Q+ + + PQ Q +
Sbjct: 2030 QPMPGLPRPVISMQAQAAVAGP-RMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLN 2088
Query: 708 LVSGQPNSIGNQIQGVVIPYTSVPTYQVSLP--QGSQGIPHQ--TYQQPVMFPNQSNQGS 763
++ P + I+ Y + P Q G+ Q +QQP + + Q
Sbjct: 2089 ILKSNPQLMAAFIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAG 2148
Query: 764 MPTTGMPVY-------------YSVIPPGQQNNLSS-SVGYLQHPGSEQVQFPRTTSPCS 809
+P G+P +++ PG N++S + Y + + +Q +
Sbjct: 2149 VPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQ 2208
Query: 810 SQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDH--------- 860
QQ Q Q +AG G Q PQ PP +Q + H
Sbjct: 2209 QQQQQQQQGSAGMAGGMAGHGQFQQ------PQGPGGYPPAMQQQQRMQQHLPLQGSSMG 2262
Query: 861 ----------QRGQKCVEFSSVDNIVQ-------HSPQLSSPIISPAQSPAPAQLSTLKT 903
Q GQ + S NI Q Q+ I SP Q P +S +
Sbjct: 2263 QMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQ---PNPMSPQQH 2319
Query: 904 VRPSGPPLSIMP-QFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRH 960
+ P S +P Q + Q S P+ Q PP P Q QP H
Sbjct: 2320 MLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPH--SSPSPRIQPQPSPHH 2375
Score = 41.2 bits (95), Expect = 0.005
Identities = 88/320 (27%), Positives = 118/320 (36%), Gaps = 75/320 (23%)
Query: 594 PPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ-------------GYIQQPSP 640
P P P PP +P QPV P +G P+S PV + Q G +Q P
Sbjct: 683 PALPAPGAQPPVIPQAQPV----RPPNG-PLSLPVNRMQVSQGMNSFNPMSLGNVQLPQA 737
Query: 641 QMPACYCAPGHYHSSQ-------------PQYRPVPSVHYNSHLNQPLPQ-PAQQTGYQV 686
M +P + HS Q P P P +H N + Q PAQ Q
Sbjct: 738 PMGPRAASPMN-HSVQMNSMGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQS---QF 793
Query: 687 IP-NQQQNYQGI--VGVQQPQSQSLVS-GQP---------NSIGNQIQGVVI-PYTSVPT 732
+P NQ + G VG+ QP +Q+ VS GQ N +G Q + P T P
Sbjct: 794 LPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPL 853
Query: 733 YQVSLPQG-SQGIPH-QTYQQPVMFPNQSNQGSMPTTGMPVYYS---------VIPPGQQ 781
+ P + G+P Q P M P Q + P+T PV S +P Q
Sbjct: 854 HPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPST--PVSSSGQTPTPTPGSVPSATQ 911
Query: 782 NNLSSSV-----GYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLS 836
+ +V + VQ P +P SSQQ Q T PPG + S
Sbjct: 912 TQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQ----QPTPVHAQPPGTPLSQAAAS 967
Query: 837 VPN---NPQSCAHSPPQWKQ 853
+ N P S A + +Q
Sbjct: 968 IDNRVPTPSSVASAETNSQQ 987
Score = 41.2 bits (95), Expect = 0.005
Identities = 106/478 (22%), Positives = 148/478 (30%), Gaps = 88/478 (18%)
Query: 522 PQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQS 581
PQ LP+P P +QPS + A Q + V SP
Sbjct: 1878 PQQSLPSPTSAPPGTP----------------TQQPSTPQTPQPPAQPQPSPVSMSPAGF 1921
Query: 582 GYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGY----IQQ 637
+ PP P P P PP QP P A + + + QQQ I
Sbjct: 1922 PSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAA--VEAARQIEREAQQQQHLYRVNINN 1979
Query: 638 PSPQ------MPACYCAPGHYHSSQPQY--RPV-PSVHYNSHLNQPLPQPAQQTGYQVIP 688
P P AP + +P PV PS+ PLPQ G
Sbjct: 1980 SMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPRPV 2039
Query: 689 NQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQV-----SLPQ---- 739
Q + G + P Q S P+++ + ++ + P + QV S PQ
Sbjct: 2040 ISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAA 2099
Query: 740 -GSQGIPHQTYQQPVMFPN---QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPG 795
Q QP M P QS G P GM S LQ+
Sbjct: 2100 FIKQRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPS----------------LQNLN 2143
Query: 796 SEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSP------- 848
+ Q PR P Q + G P G + +M + +NP + +P
Sbjct: 2144 AMQAGVPRPGVPPQQQAMGGLN-------PQGQALNIM--NPGHNPNMASMNPQYREMLR 2194
Query: 849 ----PQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTV 904
Q +Q + Q+ Q+ + H Q P PA Q ++
Sbjct: 2195 RQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHG-QFQQPQGPGGYPPAMQQQQRMQQH 2253
Query: 905 RP-----SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPG 957
P G + M Q + PG G P + Q LQ + + Q G PG
Sbjct: 2254 LPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQR--ILQQQQMKQQIGSPG 2309
Score = 40.8 bits (94), Expect = 0.007
Identities = 68/269 (25%), Positives = 91/269 (33%), Gaps = 61/269 (22%)
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINP------QTGQPFINPDG-SPVVYNPPMTQQPV 514
Q P LP+ + G NP Q Q + P SP+ ++ M
Sbjct: 699 QPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNSM-- 756
Query: 515 RSQVPGPPQPP--LPAPP------------QQPAANHIFSQDNLGSQFSHMSLAR-QPSA 559
VPG P +P PP Q PA + Q+ S MS+ QP A
Sbjct: 757 -GSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPA 815
Query: 560 D-----GSDPHAAMFQSTVVLQSPQQSGYIM--TAAPPPHPPPPPP-------------- 598
G P AA+ + + + PQ S P HP PPP
Sbjct: 816 QTGVSQGQVPGAAL-PNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTP 874
Query: 599 ----PPPPPPPLPPGQPVPTAG---------YPASGHPVSQPVLQQQGYIQ-QPSPQMPA 644
PP P P P PV ++G P++ S P +Q Q P PQ P
Sbjct: 875 PGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPV 934
Query: 645 CYCAPGHYHSSQPQYRPVPSVHYNSHLNQ 673
+ SSQ Q PV + + L+Q
Sbjct: 935 QPPSVATPQSSQQQPTPVHAQPPGTPLSQ 963
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 65.5 bits (158), Expect = 3e-10
Identities = 58/189 (30%), Positives = 76/189 (40%), Gaps = 17/189 (8%)
Query: 481 PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAP---PQQPAANH 537
PP S L Q + ++P PP V P PP PP P P P+ +
Sbjct: 203 PPPSALQPVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSASDPSLDF 262
Query: 538 IFSQDNLGSQFSHMS-LARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPP 596
+ +Q + ++ RQ A S+ +A+ P G + + PPP PPPP
Sbjct: 263 LRAQQETANAIRELAGTLRQGLAKLSEALSALL--------PLLPGTPVDSLPPPLPPPP 314
Query: 597 PPPPPPPPPLPPGQP-VPTAGYPAS--GHPVSQPVLQQQGYIQQPSPQ--MPACYCAPGH 651
PPPPPP P LPP P V P S V V+ +G I P + P AP
Sbjct: 315 PPPPPPRPVLPPPAPKVEITPEPVSVVAAVVDGAVVAARGVIIAPRSEEGAPRPPPAPLP 374
Query: 652 YHSSQPQYR 660
H S P R
Sbjct: 375 PHDSPPHKR 383
Score = 32.7 bits (73), Expect = 1.9
Identities = 29/106 (27%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 507 PPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQP-SADGSDPH 565
P + PV S P P PP P PP +P L + + +P S +
Sbjct: 296 PLLPGTPVDSLPPPLPPPPPPPPPPRPV---------LPPPAPKVEITPEPVSVVAAVVD 346
Query: 566 AAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQP 611
A+ + V+ +P+ AP P P P PP PP G P
Sbjct: 347 GAVVAARGVIIAPRSE----EGAPRPPPAPLPPHDSPPHKRRKGFP 388
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 64.7 bits (156), Expect = 5e-10
Identities = 47/136 (34%), Positives = 53/136 (38%), Gaps = 39/136 (28%)
Query: 513 PVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQST 572
P+ P P PP P PP PA QPS+ G P +
Sbjct: 1949 PISPSSPETPPPPPPPPPLPPA-------------------PPQPSSMG--PVKIPNTVS 1987
Query: 573 VVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPAS----------GH 622
LQ+P + PPP PPPPPPPPPPPPP PP P P P S
Sbjct: 1988 TPLQAPPPT-------PPPPPPPPPPPPPPPPPPPPSAP-PQVQLPVSLDLPLFPSIMMQ 2039
Query: 623 PVSQPVLQQQGYIQQP 638
PV P L Q +Q P
Sbjct: 2040 PVQHPALPPQLALQLP 2055
Score = 64.3 bits (155), Expect = 6e-10
Identities = 47/133 (35%), Positives = 55/133 (41%), Gaps = 39/133 (29%)
Query: 513 PVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQST 572
P + P PP PP P PP P QPS+ G +T
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPP----------------------QPSSMGP----VKIPNT 1985
Query: 573 VVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ 632
V +P Q APPP PPPPPPPPPPPPP PP P P + P PVS +
Sbjct: 1986 V--STPLQ-------APPPTPPPPPPPPPPPPPPPP--PPPPSAPPQVQLPVSLDLPLFP 2034
Query: 633 GYIQQP--SPQMP 643
+ QP P +P
Sbjct: 2035 SIMMQPVQHPALP 2047
Score = 43.5 bits (101), Expect = 0.001
Identities = 58/215 (26%), Positives = 81/215 (37%), Gaps = 22/215 (10%)
Query: 748 TYQQPVMFPNQSNQG-SMPTT--GMPVYYSVIPPGQQNNLSSSVGYLQH------PGSEQ 798
T QQP M + S G S+PT G+P V+ PG N SS G+ Q+ PG+
Sbjct: 3032 TVQQPGMMDSSSLHGISLPTAYPGLPGLPPVLLPGM-NGPSSLPGFPQNSNTLTPPGAGM 3090
Query: 799 VQFPR--TTSPCSSQQ-------LQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPP 849
+ FP T+SP S LQ PPPPP + Q + N +S
Sbjct: 3091 LGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPPSSSLSGQQTEQQNKESEKKQTK 3150
Query: 850 QWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGP 909
K K + K + + + + + ++ P QL L+ P
Sbjct: 3151 PNKVKKIKEEELEATKPEKHPKKEEKISSALSVLGKVVGETHVD-PIQLQALQNAIAGDP 3209
Query: 910 PLSIMPQFSRPFVPGQGDSRYPLLGQPLQ--YNPP 942
I QF F+PG P L +Q Y PP
Sbjct: 3210 ASFIGGQFLPYFIPGFASYFTPQLPGTVQGGYFPP 3244
Score = 42.7 bits (99), Expect = 0.002
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 564 PHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPP-PPPPLPPGQPVP-----TAGY 617
P+AA+ + + Y ++ + P PPPPPPPPP PP P P P T
Sbjct: 1929 PYAALEKFARQYREAYDKLYPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVST 1988
Query: 618 PASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVH---YNSHLNQP 674
P P + P P P P P S+ PQ + S+ + S + QP
Sbjct: 1989 PLQAPPPTPP--------PPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFPSIMMQP 2040
Query: 675 LPQPA 679
+ PA
Sbjct: 2041 VQHPA 2045
Score = 38.1 bits (87), Expect = 0.046
Identities = 17/34 (50%), Positives = 17/34 (50%)
Query: 572 TVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPP 605
T SP S P PPPPPPPPPPPP
Sbjct: 3095 TSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPP 3128
Score = 35.4 bits (80), Expect = 0.30
Identities = 13/18 (72%), Positives = 13/18 (72%)
Query: 593 PPPPPPPPPPPPPLPPGQ 610
PPPPPPPPPPP GQ
Sbjct: 3118 PPPPPPPPPPPSSSLSGQ 3135
Score = 34.3 bits (77), Expect = 0.67
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 585 MTAAPPPHPPPPPPPPPPPPPLPP 608
+++AP PPPPPPPPP PP
Sbjct: 3105 LSSAPTKPLLQTPPPPPPPPPPPP 3128
Score = 33.9 bits (76), Expect = 0.87
Identities = 12/16 (75%), Positives = 12/16 (75%)
Query: 591 PHPPPPPPPPPPPPPL 606
P PPPPPPPPPP L
Sbjct: 3117 PPPPPPPPPPPPSSSL 3132
Score = 33.1 bits (74), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 577 SPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPP 608
S S + ++ P P PPPPPPPP PP
Sbjct: 3096 SATSSPALSLSSAPTKPLLQTPPPPPPPPPPP 3127
Score = 32.7 bits (73), Expect = 1.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 564 PHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPP 598
P +A + L S + T PPP PPPPPP
Sbjct: 3094 PTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPP 3128
Score = 32.3 bits (72), Expect = 2.5
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 429 PGTALSQSSHGA--PVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEAAGI-PPGSI 485
PG S S HG P YP + + G +NG + P P + + PPG+
Sbjct: 3036 PGMMDSSSLHGISLPTAYPGLPGLPPVLLPG-MNGPSSLPG-----FPQNSNTLTPPGAG 3089
Query: 486 LINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLG 545
++ T + SP + +P+ Q P PP PP P PP + Q N
Sbjct: 3090 MLGFPT-----SATSSPALSLSSAPTKPLL-QTPPPPPPPPPPPPSSSLSGQQTEQQNKE 3143
Query: 546 SQ 547
S+
Sbjct: 3144 SE 3145
Score = 31.6 bits (70), Expect = 4.3
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 481 PPGSILINPQTGQPF-INPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQP 533
PP + P QP + P P + P+ P P PP PP P PP P
Sbjct: 1961 PPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPP 2014
Score = 31.2 bits (69), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 507 PPMTQQPVRSQVPGPPQPPLPAPPQQP 533
PP T P P PP PP P PP P
Sbjct: 1993 PPPTPPPPPPPPPPPPPPPPPPPPSAP 2019
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 64.7 bits (156), Expect = 5e-10
Identities = 112/464 (24%), Positives = 150/464 (32%), Gaps = 93/464 (20%)
Query: 520 GPPQPPLPAPPQ--QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQS 577
GP QPP P P Q P I +D +A Q +P+A F T L S
Sbjct: 620 GPEQPPPPCPSQTGSPPVGLIKGEDK-----DEGPVAEQVKKSTLNPNAKEFNPTKPLLS 674
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
+S P P P P PV TAG P Q YI Q
Sbjct: 675 VNKS------------TSTPTSPGPRTHSTPSIPVLTAGQSGLYSP------QYISYIPQ 716
Query: 638 ----PSPQMPACYCAP---------GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
P+ Q P Y P G Y ++ P S + P+ Q A G
Sbjct: 717 IHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGP 776
Query: 685 QV---------IPNQQQNYQGIVGVQQPQSQ--------SLVSGQPNSI--GNQIQGVVI 725
+ IP Q + G + QP + ++ P + G+ Q +V
Sbjct: 777 PLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVS 836
Query: 726 PYT-SVPTYQVSLPQGSQGIPHQTYQQPV--MFPNQSNQGSMPTTGMPVYYSVIPPGQQN 782
T P+ + PQ HQ+Y + +Q + PT P P Q+
Sbjct: 837 SSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQH 896
Query: 783 NLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--PPGGGMVMMQLSVPNN 840
G H GS Q Q Q L G PP PPG +
Sbjct: 897 Q----AGQAPHLGSGQPQ----------QNLYHPGALTGTPPSLPPGPSA--------QS 934
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQ--SPAPAQL 898
PQS P Y HQ Q F+++ ++ Q Q P +P P Q+
Sbjct: 935 PQSSFPQPAA----VYAIHHQ--QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQV 988
Query: 899 STLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
L + GPP +PQ P + S YP +G P P
Sbjct: 989 MLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQP 1032
Score = 54.7 bits (130), Expect = 5e-07
Identities = 72/270 (26%), Positives = 99/270 (36%), Gaps = 50/270 (18%)
Query: 402 RLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNG 461
R+ +GS V SST +QP P AL + H + YP +T L+
Sbjct: 823 RMLTSGSHPQAIVSSSTPQYPSAEQPTP-QALYATVHQS---YPHHATQ--------LHA 870
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPV--VYNPPMTQQPVRSQVP 519
P+T+ ++ P + Q GQ G P +Y+P S P
Sbjct: 871 HQPQPATTPTGSQPQSQHAAPSPV--QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPP 928
Query: 520 GPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
GP + QPAA + L F++M+ V Q+
Sbjct: 929 GPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAH--------------------VTQAHV 968
Query: 580 QSGYIMTAAPPPHPPPPPPP------PPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQG 633
Q+G +TAAPPPHP P PP PP PP VP +G PA P
Sbjct: 969 QTG--ITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSP----YP 1022
Query: 634 YIQQPSPQMPACYCAPGHYHSSQPQYRPVP 663
YI P + P APG + + P+P
Sbjct: 1023 YIGHPQGEQPG--QAPGFPGGADDRIPPLP 1050
Score = 47.8 bits (112), Expect = 6e-05
Identities = 100/418 (23%), Positives = 138/418 (33%), Gaps = 76/418 (18%)
Query: 404 SKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQV 463
S+TGS G + + + + + L+ ++ P +S + S S +
Sbjct: 630 SQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRT 689
Query: 464 ASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG--- 520
S + +P+ AG S L +PQ P V P M PV + VPG
Sbjct: 690 HSTPS----IPVLTAG---QSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQG 742
Query: 521 ---------PPQ-----PPLPAPPQQPAA----NHIFSQDNLGS-------QFSHMSLAR 555
PPQ P APP AA + + S QF
Sbjct: 743 KYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMM 802
Query: 556 QPSAD-GSDP-HAAMFQSTV-VLQSPQQSGYIMTAAPPPHPPPPPPPPPP---------- 602
QP A S P A M QS +L S I++++ P +P P P
Sbjct: 803 QPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYP 862
Query: 603 --PPPLPPGQP----VPTAGYPASGHPVSQPVLQQQG---YIQQPSPQMPACYCAPGHYH 653
L QP PT P S H PV Q G ++ PQ + PG
Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT 920
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPN---------QQQNYQGIVGVQQPQ 704
+ P P PS + + P P +Q +P+ Q GI P
Sbjct: 921 GTPPSLPPGPSAQ-SPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPH 979
Query: 705 ------SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFP 756
Q ++ P S G QG V P + VP S P I H +QP P
Sbjct: 980 PGAPHPPQVMLLHPPQSHGGPPQGAV-PQSGVPALSASTPSPYPYIGHPQGEQPGQAP 1036
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 64.7 bits (156), Expect = 5e-10
Identities = 112/464 (24%), Positives = 150/464 (32%), Gaps = 93/464 (20%)
Query: 520 GPPQPPLPAPPQ--QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQS 577
GP QPP P P Q P I +D +A Q +P+A F T L S
Sbjct: 620 GPEQPPPPCPSQTGSPPVGLIKGEDK-----DEGPVAEQVKKSTLNPNAKEFNPTKPLLS 674
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
+S P P P P PV TAG P Q YI Q
Sbjct: 675 VNKS------------TSTPTSPGPRTHSTPSIPVLTAGQSGLYSP------QYISYIPQ 716
Query: 638 ----PSPQMPACYCAP---------GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
P+ Q P Y P G Y ++ P S + P+ Q A G
Sbjct: 717 IHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGP 776
Query: 685 QV---------IPNQQQNYQGIVGVQQPQSQ--------SLVSGQPNSI--GNQIQGVVI 725
+ IP Q + G + QP + ++ P + G+ Q +V
Sbjct: 777 PLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVS 836
Query: 726 PYT-SVPTYQVSLPQGSQGIPHQTYQQPV--MFPNQSNQGSMPTTGMPVYYSVIPPGQQN 782
T P+ + PQ HQ+Y + +Q + PT P P Q+
Sbjct: 837 SSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQH 896
Query: 783 NLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--PPGGGMVMMQLSVPNN 840
G H GS Q Q Q L G PP PPG +
Sbjct: 897 Q----AGQAPHLGSGQPQ----------QNLYHPGALTGTPPSLPPGPSA--------QS 934
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQ--SPAPAQL 898
PQS P Y HQ Q F+++ ++ Q Q P +P P Q+
Sbjct: 935 PQSSFPQPAA----VYAIHHQ--QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQV 988
Query: 899 STLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
L + GPP +PQ P + S YP +G P P
Sbjct: 989 MLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQP 1032
Score = 53.9 bits (128), Expect = 8e-07
Identities = 73/276 (26%), Positives = 99/276 (35%), Gaps = 58/276 (21%)
Query: 402 RLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNG 461
R+ +GS V SST +QP P AL + H + YP +T L+
Sbjct: 823 RMLTSGSHPQAIVSSSTPQYPSAEQPTP-QALYATVHQS---YPHHATQ--------LHA 870
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPV--VYNPPMTQQPVRSQVP 519
P+T+ ++ P + Q GQ G P +Y+P S P
Sbjct: 871 HQPQPATTPTGSQPQSQHAAPSPV--QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPP 928
Query: 520 GPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
GP + QPAA + L F++M+ V Q+
Sbjct: 929 GPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAH--------------------VTQAHV 968
Query: 580 QSGYIMTAAPPPHPPPPPPP------PPPPPPLPPGQPVPTAG-----------YPASGH 622
Q+G +TAAPPPHP P PP PP PP VP +G YP GH
Sbjct: 969 QTG--ITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGH 1026
Query: 623 PVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQ 658
P + Q G+ P C G HS + Q
Sbjct: 1027 PQGEQPGQAPGF---PGGADDRILCRVGRSHSRRRQ 1059
Score = 47.8 bits (112), Expect = 6e-05
Identities = 100/418 (23%), Positives = 138/418 (33%), Gaps = 76/418 (18%)
Query: 404 SKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQV 463
S+TGS G + + + + + L+ ++ P +S + S S +
Sbjct: 630 SQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRT 689
Query: 464 ASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG--- 520
S + +P+ AG S L +PQ P V P M PV + VPG
Sbjct: 690 HSTPS----IPVLTAG---QSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQG 742
Query: 521 ---------PPQ-----PPLPAPPQQPAA----NHIFSQDNLGS-------QFSHMSLAR 555
PPQ P APP AA + + S QF
Sbjct: 743 KYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMM 802
Query: 556 QPSAD-GSDP-HAAMFQSTV-VLQSPQQSGYIMTAAPPPHPPPPPPPPPP---------- 602
QP A S P A M QS +L S I++++ P +P P P
Sbjct: 803 QPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYP 862
Query: 603 --PPPLPPGQP----VPTAGYPASGHPVSQPVLQQQG---YIQQPSPQMPACYCAPGHYH 653
L QP PT P S H PV Q G ++ PQ + PG
Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT 920
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPN---------QQQNYQGIVGVQQPQ 704
+ P P PS + + P P +Q +P+ Q GI P
Sbjct: 921 GTPPSLPPGPSAQ-SPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPH 979
Query: 705 ------SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFP 756
Q ++ P S G QG V P + VP S P I H +QP P
Sbjct: 980 PGAPHPPQVMLLHPPQSHGGPPQGAV-PQSGVPALSASTPSPYPYIGHPQGEQPGQAP 1036
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 64.7 bits (156), Expect = 5e-10
Identities = 112/464 (24%), Positives = 150/464 (32%), Gaps = 93/464 (20%)
Query: 520 GPPQPPLPAPPQ--QPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQS 577
GP QPP P P Q P I +D +A Q +P+A F T L S
Sbjct: 620 GPEQPPPPCPSQTGSPPVGLIKGEDK-----DEGPVAEQVKKSTLNPNAKEFNPTKPLLS 674
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQ 637
+S P P P P PV TAG P Q YI Q
Sbjct: 675 VNKS------------TSTPTSPGPRTHSTPSIPVLTAGQSGLYSP------QYISYIPQ 716
Query: 638 ----PSPQMPACYCAP---------GHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGY 684
P+ Q P Y P G Y ++ P S + P+ Q A G
Sbjct: 717 IHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGP 776
Query: 685 QV---------IPNQQQNYQGIVGVQQPQSQ--------SLVSGQPNSI--GNQIQGVVI 725
+ IP Q + G + QP + ++ P + G+ Q +V
Sbjct: 777 PLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVS 836
Query: 726 PYT-SVPTYQVSLPQGSQGIPHQTYQQPV--MFPNQSNQGSMPTTGMPVYYSVIPPGQQN 782
T P+ + PQ HQ+Y + +Q + PT P P Q+
Sbjct: 837 SSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQH 896
Query: 783 NLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPP--PPGGGMVMMQLSVPNN 840
G H GS Q Q Q L G PP PPG +
Sbjct: 897 Q----AGQAPHLGSGQPQ----------QNLYHPGALTGTPPSLPPGPSA--------QS 934
Query: 841 PQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQ--SPAPAQL 898
PQS P Y HQ Q F+++ ++ Q Q P +P P Q+
Sbjct: 935 PQSSFPQPAA----VYAIHHQ--QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQV 988
Query: 899 STLKTVRP-SGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP 941
L + GPP +PQ P + S YP +G P P
Sbjct: 989 MLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQP 1032
Score = 52.0 bits (123), Expect = 3e-06
Identities = 70/257 (27%), Positives = 94/257 (36%), Gaps = 50/257 (19%)
Query: 402 RLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNG 461
R+ +GS V SST +QP P AL + H + YP +T L+
Sbjct: 823 RMLTSGSHPQAIVSSSTPQYPSAEQPTP-QALYATVHQS---YPHHATQ--------LHA 870
Query: 462 QVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPV--VYNPPMTQQPVRSQVP 519
P+T+ ++ P + Q GQ G P +Y+P S P
Sbjct: 871 HQPQPATTPTGSQPQSQHAAPSPV--QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPP 928
Query: 520 GPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQ 579
GP + QPAA + L F++M+ V Q+
Sbjct: 929 GPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMAH--------------------VTQAHV 968
Query: 580 QSGYIMTAAPPPHPPPPPPP------PPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQG 633
Q+G +TAAPPPHP P PP PP PP VP +G PA P
Sbjct: 969 QTG--ITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSP----YP 1022
Query: 634 YIQQPSPQMPACYCAPG 650
YI P + P APG
Sbjct: 1023 YIGHPQGEQPG--QAPG 1037
Score = 47.8 bits (112), Expect = 6e-05
Identities = 100/418 (23%), Positives = 138/418 (33%), Gaps = 76/418 (18%)
Query: 404 SKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQV 463
S+TGS G + + + + + L+ ++ P +S + S S +
Sbjct: 630 SQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRT 689
Query: 464 ASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPG--- 520
S + +P+ AG S L +PQ P V P M PV + VPG
Sbjct: 690 HSTPS----IPVLTAG---QSGLYSPQYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQG 742
Query: 521 ---------PPQ-----PPLPAPPQQPAA----NHIFSQDNLGS-------QFSHMSLAR 555
PPQ P APP AA + + S QF
Sbjct: 743 KYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMM 802
Query: 556 QPSAD-GSDP-HAAMFQSTV-VLQSPQQSGYIMTAAPPPHPPPPPPPPPP---------- 602
QP A S P A M QS +L S I++++ P +P P P
Sbjct: 803 QPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYP 862
Query: 603 --PPPLPPGQP----VPTAGYPASGHPVSQPVLQQQG---YIQQPSPQMPACYCAPGHYH 653
L QP PT P S H PV Q G ++ PQ + PG
Sbjct: 863 HHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT 920
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPN---------QQQNYQGIVGVQQPQ 704
+ P P PS + + P P +Q +P+ Q GI P
Sbjct: 921 GTPPSLPPGPSAQ-SPQSSFPQPAAVYAIHHQQLPHGFTNMAHVTQAHVQTGITAAPPPH 979
Query: 705 ------SQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFP 756
Q ++ P S G QG V P + VP S P I H +QP P
Sbjct: 980 PGAPHPPQVMLLHPPQSHGGPPQGAV-PQSGVPALSASTPSPYPYIGHPQGEQPGQAP 1036
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 64.3 bits (155), Expect = 6e-10
Identities = 56/171 (32%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 473 LPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQ 532
L A +PP P P + D ++ PP P S P PP PP P PP
Sbjct: 556 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPA---PGDSTTPPPPPPPPPPPPPL 612
Query: 533 PAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQ--SGYIMTAAPP 590
P I S +L + +S S D + P V + SP G TA PP
Sbjct: 613 PGGVCISSPPSLPGGTA-ISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGG---TAIPP 668
Query: 591 PHP-------PPPPPP-------PPPPPPLPPGQPVPTAGYPASGHPVSQP 627
P P PPPPPP PPPPPPLP +P P G P P
Sbjct: 669 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPP 719
Score = 53.5 bits (127), Expect = 1e-06
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 6/130 (4%)
Query: 578 PQQSGYIMTAAPPPH----PPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQG 633
P SG I+ P P PPPPPPPPPPPPPLP G + + G +S P
Sbjct: 580 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 639
Query: 634 YIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQN 693
P P +P P SS P +P + P P G IP
Sbjct: 640 ATIPPPPPLPEGVGIPS--PSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP 697
Query: 694 YQGIVGVQQP 703
G G+ P
Sbjct: 698 LPGEAGMPPP 707
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 64.3 bits (155), Expect = 6e-10
Identities = 56/171 (32%), Positives = 66/171 (38%), Gaps = 23/171 (13%)
Query: 473 LPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQ 532
L A +PP P P + D ++ PP P S P PP PP P PP
Sbjct: 565 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPA---PGDSTTPPPPPPPPPPPPPL 621
Query: 533 PAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQ--SGYIMTAAPP 590
P I S +L + +S S D + P V + SP G TA PP
Sbjct: 622 PGGVCISSPPSLPGGTA-ISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGG---TAIPP 677
Query: 591 PHP-------PPPPPP-------PPPPPPLPPGQPVPTAGYPASGHPVSQP 627
P P PPPPPP PPPPPPLP +P P G P P
Sbjct: 678 PPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPP 728
Score = 53.5 bits (127), Expect = 1e-06
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 6/130 (4%)
Query: 578 PQQSGYIMTAAPPPH----PPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQG 633
P SG I+ P P PPPPPPPPPPPPPLP G + + G +S P
Sbjct: 589 PGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGD 648
Query: 634 YIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQN 693
P P +P P SS P +P + P P G IP
Sbjct: 649 ATIPPPPPLPEGVGIPS--PSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPP 706
Query: 694 YQGIVGVQQP 703
G G+ P
Sbjct: 707 LPGEAGMPPP 716
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 64.3 bits (155), Expect = 6e-10
Identities = 91/349 (26%), Positives = 120/349 (34%), Gaps = 70/349 (20%)
Query: 498 PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPP----QQPAANHIFSQDNLGSQFSHMSL 553
P G QQ + S P PP PP P+ QQP+AN GS
Sbjct: 1523 PSGQSSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGS------- 1575
Query: 554 ARQPSADGSDPHAAM----FQSTV---------VLQSPQQSGYIMTAAPPPHPPPPPPPP 600
Q + S P+ A+ Q TV L S + + TAA PPPPPPP
Sbjct: 1576 LSQQTVFTSGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPA 1635
Query: 601 PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ-------GYIQQPSPQMPACYCAPGHYH 653
P P H V QP QQ G + +P GH H
Sbjct: 1636 PGP------------------HLVQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGH-H 1676
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQ---NYQGIVGVQQPQSQSLVS 710
P P P+ H++ P P TG Q + Q Q N P S L S
Sbjct: 1677 LPPPPPPPGPAPHHH-------PPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLAS 1729
Query: 711 GQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQ--GSMPTTG 768
G + + P+ P + S P Q + P +Q G+ P
Sbjct: 1730 GHHTTSAQALHHP--PHQGPPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGTGPHCP 1787
Query: 769 MPVYYSVIPPGQQNNL--SSSVGYLQHPGS----EQVQFPRTTSPCSSQ 811
+PV + P N++ ++ G+ HPGS VQ P+ SP Q
Sbjct: 1788 LPVTGPHLQPQGPNSIPTPTASGFCPHPGSVALPHGVQGPQQASPVPGQ 1836
Score = 63.9 bits (154), Expect = 8e-10
Identities = 80/297 (26%), Positives = 110/297 (37%), Gaps = 70/297 (23%)
Query: 506 NPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFS--HMSLARQPSADGSD 563
NP + Q + VP PP PP PAP H+ Q N Q S H+ GS
Sbjct: 1614 NPTIHHQTAAAVVPPPPPPP-PAP-----GPHLVQQPNSHQQHSVAHVVGPVHAVTPGSH 1667
Query: 564 PHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHP 623
H+ Q +G+ + PPPPPPP P P PP P P+ G
Sbjct: 1668 IHS------------QTAGHHL-------PPPPPPPGPAPHHHPP--PHPSTGL------ 1700
Query: 624 VSQPVLQQQGYI-----QQPSPQMPACYCAPGHYHSS-----QPQYRPVPSVHYNSHLNQ 673
Q + Q ++ P P P+ A GH+ +S P ++ P ++H
Sbjct: 1701 --QGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTV 1758
Query: 674 PLPQPAQQTGYQVIPNQQQNYQGIVGVQQP---QSQSLVSGQPNSIGNQIQGVVIPYTSV 730
P P P+Q T + + Q+ G P L PNSI P+
Sbjct: 1759 P-PYPSQATHHTTLGPGPQHQPSGTGPHCPLPVTGPHLQPQGPNSIPTPTASGFCPHPG- 1816
Query: 731 PTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSS 787
V+LP G QG QQ P Q +P++ + +PP QNN S
Sbjct: 1817 ---SVALPHGVQG-----PQQASPVPGQ----------IPIHRAQVPPTFQNNYHGS 1855
Score = 42.4 bits (98), Expect = 0.002
Identities = 60/257 (23%), Positives = 79/257 (30%), Gaps = 43/257 (16%)
Query: 619 ASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQP 678
+ HP V + Q P +P P H P P P P P
Sbjct: 1412 SKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSPKP-P 1470
Query: 679 AQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLP 738
+QQ G P+ Q+ Q ++PQ + Q Q +T P+ Q S
Sbjct: 1471 SQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSSA- 1529
Query: 739 QGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQ 798
TY Q F QS + P P S Q ++ Y Q GS
Sbjct: 1530 ---------TYSQ---FNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLS 1577
Query: 799 VQFPRTTSP-------CSSQQLQGHQCTAG----------------------PPPPPGGG 829
Q T+ P S Q + GH T G PPPPP G
Sbjct: 1578 QQTVFTSGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPG 1637
Query: 830 MVMMQLSVPNNPQSCAH 846
++Q + S AH
Sbjct: 1638 PHLVQQPNSHQQHSVAH 1654
Score = 40.0 bits (92), Expect = 0.012
Identities = 149/692 (21%), Positives = 220/692 (31%), Gaps = 191/692 (27%)
Query: 331 RVNKDASGRS---------TNSHQSSTEN---ELKYSEPRP-WSSTDSDSSLRNLKPAVT 377
R +KD+ G S S SS N +L+ P P +S D N +P T
Sbjct: 1276 RKDKDSGGESPCVSCSPSHVQSSPSSHSNHIPQLQAKGPVPSFSELMEDPDPENPEPTTT 1335
Query: 378 KASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLS--------------- 422
+ S + KS ++SK GS S + G +
Sbjct: 1336 NECP-------SPDTSQNTCKSPPKMSKPGSPGSVIPAQAHGKIFTKPDPQWDSTVSASE 1388
Query: 423 -----HIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEA 477
H++ L LS ++ +P TH S + L+ ++ S T P
Sbjct: 1389 AENGVHLKTELQQKQLSNNNQALSKNHPP-QTHVRNSSEQ-LSQKLPSVPTKLHCPPSPH 1446
Query: 478 AGIPPGSILINPQTGQPFINPD------GSPVVYNPPMTQQPVRSQVPGPPQPP------ 525
PP S + +++P GSP Y P +Q P QV P + P
Sbjct: 1447 LENPPKSSTPHTPVQHGYLSPKPPSQQLGSP--YRPHHSQSP---QVGTPQREPQRNFYP 1501
Query: 526 ----LPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQS 581
LPA QQ + +F+Q G + S Q S + +
Sbjct: 1502 AAQNLPANTQQATSGTLFTQTPSGQSSATYSQFNQQSLNST------------------- 1542
Query: 582 GYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQ 641
PPPPPPPPP
Sbjct: 1543 --------------APPPPPPPPP------------------------------------ 1552
Query: 642 MPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQ----QNYQGI 697
+ +Y + QP S ++ ++ NQ +QQT + PNQ + Q +
Sbjct: 1553 ------SSSYYQNQQP------SANFQNY-NQLKGSLSQQTVFTSGPNQALPGTTSQQTV 1599
Query: 698 VGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPN 757
G L S P +I +Q V+P P PH Q PN
Sbjct: 1600 PGHHVTPGHFLPSQNP-TIHHQTAAAVVPPPPPPPPAPG--------PHLVQQ-----PN 1645
Query: 758 QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRT-TSPCSSQQLQGH 816
Q S+ PV+ + PG + ++ +L P P P S LQG
Sbjct: 1646 SHQQHSVAHVVGPVH--AVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGL 1703
Query: 817 QC--------TAGPPPPPGGGMVMMQLSVPNNPQSCAH----SPPQWKQNKYYCDHQRGQ 864
Q PPPPP V+ + Q+ H PP + + +
Sbjct: 1704 QAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTVPPYPS 1763
Query: 865 KCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPG 924
+ +++ QH P + P P P T ++P GP SI + F P
Sbjct: 1764 QATHHTTLGPGPQHQPSGTGP-----HCPLPV---TGPHLQPQGPN-SIPTPTASGFCPH 1814
Query: 925 QGDSRYPLLGQ-PLQYNPPAVLHGHIPNQQGQ 955
G P Q P Q +P + G IP + Q
Sbjct: 1815 PGSVALPHGVQGPQQASP---VPGQIPIHRAQ 1843
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 64.3 bits (155), Expect = 6e-10
Identities = 91/349 (26%), Positives = 120/349 (34%), Gaps = 70/349 (20%)
Query: 498 PDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPP----QQPAANHIFSQDNLGSQFSHMSL 553
P G QQ + S P PP PP P+ QQP+AN GS
Sbjct: 1523 PSGQSSATYSQFNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGS------- 1575
Query: 554 ARQPSADGSDPHAAM----FQSTV---------VLQSPQQSGYIMTAAPPPHPPPPPPPP 600
Q + S P+ A+ Q TV L S + + TAA PPPPPPP
Sbjct: 1576 LSQQTVFTSGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPA 1635
Query: 601 PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQ-------GYIQQPSPQMPACYCAPGHYH 653
P P H V QP QQ G + +P GH H
Sbjct: 1636 PGP------------------HLVQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGH-H 1676
Query: 654 SSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQ---NYQGIVGVQQPQSQSLVS 710
P P P+ H++ P P TG Q + Q Q N P S L S
Sbjct: 1677 LPPPPPPPGPAPHHH-------PPPHPSTGLQGLQAQHQHVVNSAPPPPPPPPPSSVLAS 1729
Query: 711 GQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQ--GSMPTTG 768
G + + P+ P + S P Q + P +Q G+ P
Sbjct: 1730 GHHTTSAQALHHP--PHQGPPLFPSSAHPTVPPYPSQATHHTTLGPGPQHQPSGTGPHCP 1787
Query: 769 MPVYYSVIPPGQQNNL--SSSVGYLQHPGS----EQVQFPRTTSPCSSQ 811
+PV + P N++ ++ G+ HPGS VQ P+ SP Q
Sbjct: 1788 LPVTGPHLQPQGPNSIPTPTASGFCPHPGSVALPHGVQGPQQASPVPGQ 1836
Score = 63.9 bits (154), Expect = 8e-10
Identities = 80/297 (26%), Positives = 110/297 (37%), Gaps = 70/297 (23%)
Query: 506 NPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFS--HMSLARQPSADGSD 563
NP + Q + VP PP PP PAP H+ Q N Q S H+ GS
Sbjct: 1614 NPTIHHQTAAAVVPPPPPPP-PAP-----GPHLVQQPNSHQQHSVAHVVGPVHAVTPGSH 1667
Query: 564 PHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHP 623
H+ Q +G+ + PPPPPPP P P PP P P+ G
Sbjct: 1668 IHS------------QTAGHHL-------PPPPPPPGPAPHHHPP--PHPSTGL------ 1700
Query: 624 VSQPVLQQQGYI-----QQPSPQMPACYCAPGHYHSS-----QPQYRPVPSVHYNSHLNQ 673
Q + Q ++ P P P+ A GH+ +S P ++ P ++H
Sbjct: 1701 --QGLQAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTV 1758
Query: 674 PLPQPAQQTGYQVIPNQQQNYQGIVGVQQP---QSQSLVSGQPNSIGNQIQGVVIPYTSV 730
P P P+Q T + + Q+ G P L PNSI P+
Sbjct: 1759 P-PYPSQATHHTTLGPGPQHQPSGTGPHCPLPVTGPHLQPQGPNSIPTPTASGFCPHPG- 1816
Query: 731 PTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSS 787
V+LP G QG QQ P Q +P++ + +PP QNN S
Sbjct: 1817 ---SVALPHGVQG-----PQQASPVPGQ----------IPIHRAQVPPTFQNNYHGS 1855
Score = 42.4 bits (98), Expect = 0.002
Identities = 60/257 (23%), Positives = 79/257 (30%), Gaps = 43/257 (16%)
Query: 619 ASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQP 678
+ HP V + Q P +P P H P P P P P
Sbjct: 1412 SKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPKSSTPHTPVQHGYLSPKP-P 1470
Query: 679 AQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLP 738
+QQ G P+ Q+ Q ++PQ + Q Q +T P+ Q S
Sbjct: 1471 SQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSSA- 1529
Query: 739 QGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQ 798
TY Q F QS + P P S Q ++ Y Q GS
Sbjct: 1530 ---------TYSQ---FNQQSLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLS 1577
Query: 799 VQFPRTTSP-------CSSQQLQGHQCTAG----------------------PPPPPGGG 829
Q T+ P S Q + GH T G PPPPP G
Sbjct: 1578 QQTVFTSGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPG 1637
Query: 830 MVMMQLSVPNNPQSCAH 846
++Q + S AH
Sbjct: 1638 PHLVQQPNSHQQHSVAH 1654
Score = 40.0 bits (92), Expect = 0.012
Identities = 149/692 (21%), Positives = 220/692 (31%), Gaps = 191/692 (27%)
Query: 331 RVNKDASGRS---------TNSHQSSTEN---ELKYSEPRP-WSSTDSDSSLRNLKPAVT 377
R +KD+ G S S SS N +L+ P P +S D N +P T
Sbjct: 1276 RKDKDSGGESPCVSCSPSHVQSSPSSHSNHIPQLQAKGPVPSFSELMEDPDPENPEPTTT 1335
Query: 378 KASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLS--------------- 422
+ S + KS ++SK GS S + G +
Sbjct: 1336 NECP-------SPDTSQNTCKSPPKMSKPGSPGSVIPAQAHGKIFTKPDPQWDSTVSASE 1388
Query: 423 -----HIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEA 477
H++ L LS ++ +P TH S + L+ ++ S T P
Sbjct: 1389 AENGVHLKTELQQKQLSNNNQALSKNHPP-QTHVRNSSEQ-LSQKLPSVPTKLHCPPSPH 1446
Query: 478 AGIPPGSILINPQTGQPFINPD------GSPVVYNPPMTQQPVRSQVPGPPQPP------ 525
PP S + +++P GSP Y P +Q P QV P + P
Sbjct: 1447 LENPPKSSTPHTPVQHGYLSPKPPSQQLGSP--YRPHHSQSP---QVGTPQREPQRNFYP 1501
Query: 526 ----LPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQS 581
LPA QQ + +F+Q G + S Q S + +
Sbjct: 1502 AAQNLPANTQQATSGTLFTQTPSGQSSATYSQFNQQSLNST------------------- 1542
Query: 582 GYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQ 641
PPPPPPPPP
Sbjct: 1543 --------------APPPPPPPPP------------------------------------ 1552
Query: 642 MPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQ----QNYQGI 697
+ +Y + QP S ++ ++ NQ +QQT + PNQ + Q +
Sbjct: 1553 ------SSSYYQNQQP------SANFQNY-NQLKGSLSQQTVFTSGPNQALPGTTSQQTV 1599
Query: 698 VGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPN 757
G L S P +I +Q V+P P PH Q PN
Sbjct: 1600 PGHHVTPGHFLPSQNP-TIHHQTAAAVVPPPPPPPPAPG--------PHLVQQ-----PN 1645
Query: 758 QSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRT-TSPCSSQQLQGH 816
Q S+ PV+ + PG + ++ +L P P P S LQG
Sbjct: 1646 SHQQHSVAHVVGPVH--AVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGL 1703
Query: 817 QC--------TAGPPPPPGGGMVMMQLSVPNNPQSCAH----SPPQWKQNKYYCDHQRGQ 864
Q PPPPP V+ + Q+ H PP + + +
Sbjct: 1704 QAQHQHVVNSAPPPPPPPPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTVPPYPS 1763
Query: 865 KCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPG 924
+ +++ QH P + P P P T ++P GP SI + F P
Sbjct: 1764 QATHHTTLGPGPQHQPSGTGP-----HCPLPV---TGPHLQPQGPN-SIPTPTASGFCPH 1814
Query: 925 QGDSRYPLLGQ-PLQYNPPAVLHGHIPNQQGQ 955
G P Q P Q +P + G IP + Q
Sbjct: 1815 PGSVALPHGVQGPQQASP---VPGQIPIHRAQ 1843
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 63.9 bits (154), Expect = 8e-10
Identities = 101/380 (26%), Positives = 114/380 (30%), Gaps = 80/380 (21%)
Query: 489 PQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQF 548
PQ G P P P Q + Q P PP P PPQ
Sbjct: 62 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG---------------- 105
Query: 549 SHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPP-----PP 603
+R P + P Q P G PPP P P PPP P
Sbjct: 106 ---DKSRSPRSPPGKP-----------QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 151
Query: 604 PPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVP 663
P PPG+P G P G S+ G Q P PQ +QPQ P P
Sbjct: 152 GPPPPGKP---QGPPPQGDNKSRSSRSPPGKPQGPPPQ-----------GGNQPQGPPPP 197
Query: 664 SVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQSLVS------GQPNSIG 717
+P P Q P QG +SQS S G P G
Sbjct: 198 P-------GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGG 250
Query: 718 NQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSN-QGSMPTTGMPVYYSVI 776
NQ QG P P QG P Q +P P QG P G S
Sbjct: 251 NQPQGPPPP-----------PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRS 299
Query: 777 PPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGP--PPPPGGGMVMMQ 834
PPG+ G P+ P + QG P PPP GG
Sbjct: 300 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSA 359
Query: 835 LSVPNNPQSCAHSPPQWKQN 854
S P PQ PPQ + N
Sbjct: 360 RSPPGKPQ----GPPQQEGN 375
Score = 57.8 bits (138), Expect = 6e-08
Identities = 105/390 (26%), Positives = 119/390 (30%), Gaps = 71/390 (18%)
Query: 576 QSPQQSGYIMTAAPPPHPPPPPPPPP--------PPPPLPPGQPVPTAGYPAS-----GH 622
Q P G PPP P P PPP PPPP P P P S G
Sbjct: 58 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGK 117
Query: 623 PVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQT 682
P P Q G Q P P P ++PQ P P P PQ ++
Sbjct: 118 PQGPP--PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG-----PPPQGDNKS 170
Query: 683 GYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSI----GNQIQGVVIP--YTSVPTYQVS 736
P + G QPQ G+P GN+ QG P P +
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDN 230
Query: 737 LPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGS 796
Q ++ P + P NQ QG P G P PP Q N PG
Sbjct: 231 KSQSARSPPGKPQGPPPQGGNQP-QGPPPPPGKPQG----PPPQGGNKPQGP---PPPGK 282
Query: 797 EQVQFPRTTSPCSSQQL----------QGHQCTAGPPPPPG--------GGMVMMQLSVP 838
Q P+ S S + QG GPPPPPG GG P
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 342
Query: 839 NNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPA---P 895
PQ PP Q G K S Q PQ PA P
Sbjct: 343 GKPQG---PPP-----------QGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 388
Query: 896 AQLSTLKTVRPSGPPLSIMPQFSRPFVPGQ 925
Q +P GPP PQ RP P Q
Sbjct: 389 QQPQAPPAGQPQGPPRP--PQGGRPSRPPQ 416
Score = 57.4 bits (137), Expect = 7e-08
Identities = 102/404 (25%), Positives = 124/404 (30%), Gaps = 51/404 (12%)
Query: 577 SPQQSGYIMTAAP-PPHPPPPPPP--------PPPPPPLPPGQPV----PTAGYPASGHP 623
+P Q G P PP P PPP PPPPP P G P G P G P
Sbjct: 39 APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 98
Query: 624 VSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTG 683
P + + P P P +QPQ P P +P P Q
Sbjct: 99 QGPPPQGDKSRSPRSPPGKPQ---GPPPQGGNQPQGPPPPP-------GKPQGPPPQGGN 148
Query: 684 YQVIPNQQQNYQGIVGVQQPQSQSLVS------GQPNSIGNQIQGVVIPYTSVPTYQVSL 737
P QG +S+S S G P GNQ QG P
Sbjct: 149 KPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPP----------- 197
Query: 738 PQGSQGIPHQTYQQPVMFPNQSN-QGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGS 796
P QG P Q +P P QG P + PPG+ G
Sbjct: 198 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPP 257
Query: 797 EQVQFPRTTSPCSSQQLQGHQCTAGP--PPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQN 854
P+ P + QG P PPP GG S P PQ PPQ
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG---PPPQGGNQ 314
Query: 855 KYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIM 914
G+ N Q P P P Q + ++ + +P GPP
Sbjct: 315 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEG 374
Query: 915 PQFSRPFVPGQGDSRYPL---LGQPLQYNPPAVLHGHIPNQQGQ 955
P P G+ + P GQP PP G P++ Q
Sbjct: 375 NNPQGPPPPAGGNPQQPQAPPAGQP--QGPPRPPQGGRPSRPPQ 416
Score = 57.0 bits (136), Expect = 1e-07
Identities = 95/363 (26%), Positives = 113/363 (31%), Gaps = 61/363 (16%)
Query: 481 PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFS 540
PPG P G +P P P Q + Q P PP P P P N
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGNKPQG 152
Query: 541 QDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHP--PPPPP 598
G + P G + + Q P G PPP P P PP
Sbjct: 153 PPPPGKP-------QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 205
Query: 599 PP---PPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSS 655
P P P PPG+P G P G SQ G Q P PQ +
Sbjct: 206 PQGGNKPQGPPPPGKP---QGPPPQGDNKSQSARSPPGKPQGPPPQ-----------GGN 251
Query: 656 QPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQPQSQS---LVSGQ 712
QPQ P P P PQ + P + Q G + S+S G
Sbjct: 252 QPQGPPPPP----GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGP 307
Query: 713 PNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSN-QGSMPTTGMPV 771
P GNQ QG P P QG P Q +P P QG P G
Sbjct: 308 PPQGGNQPQGPPPP-----------PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Query: 772 YYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQC-----TAGPPPPP 826
+ PPG+ Q P ++ P+ P + Q Q GPP PP
Sbjct: 357 RSARSPPGKP----------QGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPP 406
Query: 827 GGG 829
GG
Sbjct: 407 QGG 409
Score = 34.7 bits (78), Expect = 0.51
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 477 AAGIPPGSILINPQTGQPFINPDGSPVVY--NPPMTQQPVRSQVPGPPQPPLPAPPQQP 533
+A PPG PQ Q NP G P NP Q P Q GPP+PP P +P
Sbjct: 358 SARSPPGKPQGPPQ--QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 63.5 bits (153), Expect = 1e-09
Identities = 92/333 (27%), Positives = 123/333 (36%), Gaps = 80/333 (24%)
Query: 585 MTAAPPP-HPP--PPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQ 641
+ AAPPP PP PP P PPPP PP P P A+ P Q V + +Q P PQ
Sbjct: 9 LQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTE----LQSPQPQ 64
Query: 642 MPACYCAPGHYHSSQPQY-RPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGV 700
PG Q QY +P+V P P+Q TG Q Y +V V
Sbjct: 65 AQ----PPG----GQKQYVTELPAV----------PAPSQPTGAPTPSPAPQQYI-VVTV 105
Query: 701 QQ---PQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGS-QGIPHQTYQQPV--- 753
+ S+++ P S +Q T VPT V QG+ Q + QT Q
Sbjct: 106 SEGAMRASETVSEASPGSTASQ--------TGVPTQVVQQVQGTQQRLLVQTSVQAKPGH 157
Query: 754 MFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQL 813
+ P Q +P +P V+ + V H G++QV P SP +
Sbjct: 158 VSPLQLTNIQVPQQALPTQRLVVQSAAPGSKGGQVSLTVH-GTQQVHSPPEQSPVQANSS 216
Query: 814 QGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVD 873
TAG P G V QL V QS V +
Sbjct: 217 SSK--TAGAPT----GTVPQQLQVHGVQQS-----------------------VPVTQER 247
Query: 874 NIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRP 906
++VQ +PQ A P P Q T++ ++P
Sbjct: 248 SVVQATPQ--------APKPGPVQPLTVQGLQP 272
Score = 58.9 bits (141), Expect = 3e-08
Identities = 70/269 (26%), Positives = 101/269 (37%), Gaps = 44/269 (16%)
Query: 578 PQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPA---SGHPVSQPVLQQQGY 634
P Q A P PPPPPP P PP P P Y S P +QP Q+ Y
Sbjct: 15 PSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGGQKQY 74
Query: 635 IQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQ---PAQQTGYQVIPNQQ 691
+ + P +PA SQP P PS ++ + + A +T + P
Sbjct: 75 VTE-LPAVPA---------PSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEASPGST 124
Query: 692 QNYQGIVG--VQQPQS-------QSLVSGQPNSIGN-QIQGVVIPYTSVPTYQV---SLP 738
+ G+ VQQ Q Q+ V +P + Q+ + +P ++PT ++ S
Sbjct: 125 ASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVVQSAA 184
Query: 739 QGSQG--------IPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPG-QQNNLSSSVG 789
GS+G Q + P P Q+N S T G P +P Q + + SV
Sbjct: 185 PGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPT--GTVPQQLQVHGVQQSVP 242
Query: 790 YLQH----PGSEQVQFPRTTSPCSSQQLQ 814
Q + Q P P + Q LQ
Sbjct: 243 VTQERSVVQATPQAPKPGPVQPLTVQGLQ 271
Score = 35.0 bits (79), Expect = 0.39
Identities = 62/252 (24%), Positives = 80/252 (31%), Gaps = 58/252 (23%)
Query: 474 PLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQ-- 531
P AA P + Q+ QP P G Y + P SQ G P P PAP Q
Sbjct: 43 PPTAAATPQPQYVTELQSPQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPS-PAPQQYI 101
Query: 532 -------QPAANHIFSQDNLGS---------------QFSHMSLARQPSADGSDPHAAMF 569
A+ S+ + GS Q + L Q S H +
Sbjct: 102 VVTVSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPL 161
Query: 570 QSTVVLQSPQQS-----GYIMTAAP---------PPHPPPPPPPPPPPPPL--------P 607
Q T + Q PQQ+ + +AAP H PP P+
Sbjct: 162 QLTNI-QVPQQALPTQRLVVQSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKT 220
Query: 608 PGQPVPTAGYPASGHPVSQ--PVLQQQGYIQ------QPSPQMPACY--CAPGHYHSSQP 657
G P T H V Q PV Q++ +Q +P P P P H
Sbjct: 221 AGAPTGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQ 280
Query: 658 QYRPVPSVHYNS 669
Q + VP H S
Sbjct: 281 QLQQVPVPHVYS 292
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 63.2 bits (152), Expect = 1e-09
Identities = 105/439 (23%), Positives = 151/439 (34%), Gaps = 87/439 (19%)
Query: 481 PPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGP------PQPPL-PAP---- 529
PP + G +++ P Y+ P Q ++ + PGP P P L PAP
Sbjct: 772 PPSPFPSSTGPGPHYLSGPLPPGTYSGPT--QLIQPRAPGPHAMPVAPGPALYPAPAYTP 829
Query: 530 -----PQQPAANHIFSQDNLG----SQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQ 580
P+ + + S +G + + A P G + A+ +T + S Q
Sbjct: 830 ELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPPQFSGPELAMAVRPATTTVDSIQA 889
Query: 581 SGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTA-GYPASGHPVSQPVLQQQGYIQQPS 639
TA P P P P PPPP P+PP QP+PT YPA QP+ Q + S
Sbjct: 890 PIPSHTA---PRPNPTPAPPPPCFPVPPPQPLPTPYTYPAG---AKQPIPAQHHF----S 939
Query: 640 PQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVG 699
+PA + AP QP +P PS + QP QP + P Q G
Sbjct: 940 SGIPAGFPAPRIGPQPQPHPQPHPSQAFGP---QPPQQPLPLQHPHLFPPQAP------G 990
Query: 700 VQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQS 759
+ PQS + QP +G P L G P + + FP
Sbjct: 991 LLPPQSPYPYAPQPGVLGQ----------PPPPLHTQLYPGPAQDPLPAHSGALPFP--- 1037
Query: 760 NQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCT 819
+ G P+ Y P + ++ ++ P S + Q
Sbjct: 1038 SPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSS------------AGQSTPSPHLV 1085
Query: 820 AGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQH- 878
P P PG G P P+ A PP +RG + S QH
Sbjct: 1086 PSPAPSPGPG--------PVPPRPPAAEPPPCL--------RRGAAAADLLSSSPESQHG 1129
Query: 879 ---SPQLSSPIISPAQSPA 894
SP P++ P + A
Sbjct: 1130 GTQSPGGGQPLLQPTKVDA 1148
Score = 41.2 bits (95), Expect = 0.005
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 529 PPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAA 588
PP +P A+ SQ N H+ Q G D + Q+T+ S + G + +
Sbjct: 1464 PPCKPLASASISQKN------HLPQDSQDLVLGGDVPISSIQATIAKLSIRPPGGLESPV 1517
Query: 589 PPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQ-QQGYIQQPSPQMPA 644
P P PP PP LP P+P++ P P+S P+ + Q + P P+ P+
Sbjct: 1518 ASL-PGPAEPPGLPPASLPESTPIPSSSPP----PLSSPLPEAPQPKEEPPVPEAPS 1569
Score = 35.0 bits (79), Expect = 0.39
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 24/118 (20%)
Query: 426 QPLPGTALSQSSH----------GAPVVYPTV-STHSSLSF--DGGLNGQVASPSTSFFL 472
+PL ++SQ +H G V ++ +T + LS GGL VAS
Sbjct: 1467 KPLASASISQKNHLPQDSQDLVLGGDVPISSIQATIAKLSIRPPGGLESPVASLPG---- 1522
Query: 473 LPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPP 530
P E G+PP S+ P++ P P SP + P+ + P + P P+ P PP
Sbjct: 1523 -PAEPPGLPPASL---PES-TPI--PSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPP 1573
Score = 33.9 bits (76), Expect = 0.87
Identities = 95/371 (25%), Positives = 128/371 (34%), Gaps = 69/371 (18%)
Query: 583 YIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQPSPQM 642
++ +A P PP P P P P P+P Y S P IQ +P
Sbjct: 762 FLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTY-------SGPT----QLIQPRAPGP 810
Query: 643 PACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQVIPNQQQNYQGIVGVQQ 702
A APG P Y P + +P+ + Q G P Y G VG
Sbjct: 811 HAMPVAPGPALYPAPAYTPELGL---------VPRSSPQHGVVSSP-----YVG-VGPAP 855
Query: 703 PQSQSLVSGQPNSIGNQIQGVVIP-YTSVPTYQVSLPQGSQGIPHQT-YQQPVMFPNQSN 760
P + + P G ++ V P T+V + Q +P + P+ T P FP
Sbjct: 856 PVAGLPSAPPPQFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFP---- 911
Query: 761 QGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQ--FPR-TTSPCSSQQLQGHQ 817
P +P Y+ P G + + + QH S + FP P Q H
Sbjct: 912 --VPPPQPLPTPYT-YPAGAKQPIPA-----QHHFSSGIPAGFPAPRIGPQPQPHPQPHP 963
Query: 818 CTAGPPPPPGGGMVMMQLSVPN--NPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNI 875
A P PP + L P+ PQ+ PP Q+ Y Q G +
Sbjct: 964 SQAFGPQPP---QQPLPLQHPHLFPPQAPGLLPP---QSPYPYAPQPGV----------L 1007
Query: 876 VQHSPQLSSPII-SPAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLG 934
Q P L + + PAQ P PA L P GPP P P G S P+
Sbjct: 1008 GQPPPPLHTQLYPGPAQDPLPAHSGALPFPSP-GPPQPPHP----PLAYGPAPSTRPMGP 1062
Query: 935 Q--PLQYNPPA 943
Q PL P+
Sbjct: 1063 QAAPLTIRGPS 1073
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 63.2 bits (152), Expect = 1e-09
Identities = 43/133 (32%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 507 PPMTQQPVRSQVPGPPQ---------PPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQP 557
PP Q P P PP P N + S D L S S + QP
Sbjct: 95 PPSAAPTAVQQAPTPANRQISTYITVPPSPLIQTLVQGNILVSDDVLMSAMSAFTSLDQP 154
Query: 558 SADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGY 617
G P QS++ + S PPP PPPPPP PPPPPP PP P + G
Sbjct: 155 MPQGPPP----VQSSLNMHSVPS----YLTQPPPPPPPPPPLPPPPPPQPPPPPPQSLGP 206
Query: 618 PASGHPVSQPVLQ 630
P +P V++
Sbjct: 207 PGRPNPGGNGVVE 219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,427,014
Number of Sequences: 37866
Number of extensions: 3590570
Number of successful extensions: 81273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 1275
Number of HSP's that attempted gapping in prelim test: 26869
Number of HSP's gapped (non-prelim): 20655
length of query: 1099
length of database: 18,247,518
effective HSP length: 113
effective length of query: 986
effective length of database: 13,968,660
effective search space: 13773098760
effective search space used: 13773098760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.