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Search of human proteins with 31542309
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
(802 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 1632 0.0
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 1084 0.0
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 194 3e-49
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 194 3e-49
gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferas... 182 1e-45
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens] 172 8e-43
gi|27545323 chondroitin polymerizing factor [Homo sapiens] 161 3e-39
gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine 3... 82 3e-15
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 73 9e-13
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 73 9e-13
gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens] 67 5e-11
gi|239757870 PREDICTED: novel protein similar to chondroitin sul... 62 3e-09
gi|239752388 PREDICTED: novel protein similar to chondroitin sul... 62 3e-09
gi|239746905 PREDICTED: novel protein similar to chondroitin sul... 62 3e-09
gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens] 55 3e-07
gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens] 55 3e-07
gi|93141005 lunatic fringe isoform b [Homo sapiens] 49 2e-05
gi|93140999 lunatic fringe isoform a [Homo sapiens] 49 2e-05
gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 48 3e-05
gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ... 48 3e-05
gi|74271816 radical fringe [Homo sapiens] 45 3e-04
gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens] 40 0.009
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 38 0.033
gi|239749709 PREDICTED: hypothetical protein [Homo sapiens] 37 0.073
gi|15451877 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 35 0.28
gi|15451875 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 35 0.28
gi|84452146 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 35 0.28
gi|15451879 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 ... 35 0.28
gi|4502343 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1 [... 35 0.28
gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo sap... 35 0.28
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 1632 bits (4227), Expect = 0.0
Identities = 802/802 (100%), Positives = 802/802 (100%)
Query: 1 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGG 60
MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGG
Sbjct: 1 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGG 60
Query: 61 ARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFF 120
ARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFF
Sbjct: 61 ARGDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFF 120
Query: 121 SSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDR 180
SSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDR
Sbjct: 121 SSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDR 180
Query: 181 LENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIG 240
LENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIG
Sbjct: 181 LENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIG 240
Query: 241 KCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQA 300
KCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQA
Sbjct: 241 KCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQA 300
Query: 301 ITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIPP 360
ITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIPP
Sbjct: 301 ITLHPNKNPPYQYRLHSYMLSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIPP 360
Query: 361 SFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDSAQREALDDIVMQVMEMINANA 420
SFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDSAQREALDDIVMQVMEMINANA
Sbjct: 361 SFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDSAQREALDDIVMQVMEMINANA 420
Query: 421 KTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKI 480
KTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKI
Sbjct: 421 KTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKI 480
Query: 481 QFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPL 540
QFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPL
Sbjct: 481 QFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPL 540
Query: 541 SGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQ 600
SGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQ
Sbjct: 541 SGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQ 600
Query: 601 ILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIF 660
ILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIF
Sbjct: 601 ILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIF 660
Query: 661 SQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED 720
SQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED
Sbjct: 661 SQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED 720
Query: 721 VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEM 780
VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEM
Sbjct: 721 VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEM 780
Query: 781 WLEKNDPSYSKSSNNNGSVRTA 802
WLEKNDPSYSKSSNNNGSVRTA
Sbjct: 781 WLEKNDPSYSKSSNNNGSVRTA 802
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 1084 bits (2803), Expect = 0.0
Identities = 527/766 (68%), Positives = 616/766 (80%), Gaps = 26/766 (3%)
Query: 40 RRRASPEGCRS--GQAAAS-----QAGGARGDARGAQLWPPGSDPDGG---------PRD 83
RR PEG G AA + GGA G R + PGS +G R
Sbjct: 113 RRGREPEGATGLPGAPAAEGEPEEEDGGAAGQRRDGR---PGSSHNGSGDGGAAAPSARP 169
Query: 84 RNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSE----GSDTSVPIPVVPLRGV 139
R+FL+VGVMTAQKYL +RA+AA RTW++ IPG+V+FFSS+ P+PV+ L GV
Sbjct: 170 RDFLYVGVMTAQKYLGSRALAAQRTWARFIPGRVEFFSSQQPPNAGQPPPPLPVIALPGV 229
Query: 140 DDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT 199
DDSYPPQKKSFMM+KYMHDHYLDKYEWFMRADDDVYIKGD+LE FLRSLNSS+PL+LGQT
Sbjct: 230 DDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGDKLEEFLRSLNSSKPLYLGQT 289
Query: 200 GLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCV 259
GLG EE+GKL LEPGENFCMGGPG+I SREVLRRMVPHIG+CLREMYTTHEDVEVGRCV
Sbjct: 290 GLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLREMYTTHEDVEVGRCV 349
Query: 260 RRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQAITLHPNKNPPYQYRLHSYM 319
RRF G QCVWSYEMQQLF+ENYE N+KGYI+DLHNSKIH AITLHPNK P YQYRLH+YM
Sbjct: 350 RRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHAAITLHPNKRPAYQYRLHNYM 409
Query: 320 LSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFL 379
LSRKISELR+RTIQLHRE LMSK SNTE+ KED QLG+ PSF FQPR+R E++EWEFL
Sbjct: 410 LSRKISELRYRTIQLHRESALMSKLSNTEVSKEDQQLGVIPSFNHFQPRERNEVIEWEFL 469
Query: 380 TGKYLYSAVDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRV 439
TGK LYSA + QPPR+ + S R ALDD V+QVMEMIN NAK+RGR+IDFKEIQYGYRRV
Sbjct: 470 TGKLLYSAAENQPPRQSLSSILRTALDDTVLQVMEMINENAKSRGRLIDFKEIQYGYRRV 529
Query: 440 NPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQ 499
NPM+G EYILDLLLLYK+HKG+K+TVPVRRHAYLQQ FSK F E EELD L + IN
Sbjct: 530 NPMHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFRETEELDVNSLVESINS 589
Query: 500 ESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCL 559
E+ S SF+SNSLK L FQ H E KK++IL+PL GR+D+F+RFM NFE CL
Sbjct: 590 ETQSFSFISNSLKILSSFQGAKEMGGHNE---KKVHILVPLIGRYDIFLRFMENFENMCL 646
Query: 560 IPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSS 619
IP QNVKLV++LF+ DS D +K +EL++ Y+ KYPKA+M ++P+ GEFSR L LE+ S+
Sbjct: 647 IPKQNVKLVIILFSRDSGQDSSKHIELIKGYQNKYPKAEMTLIPMKGEFSRGLGLEMASA 706
Query: 620 QFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHF 679
QF+N++LL FCDVDL+F +FLQRCR NT+ GQQ+Y+PIIFSQYDPK+ G P+D++F
Sbjct: 707 QFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQYDPKVTNGGNPPTDDYF 766
Query: 680 AFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQE 739
F++KTGFWR+YG+GITCIYK DL+ GGFD SIQGWGLEDVDL+NKV+ +GL+ FRSQE
Sbjct: 767 IFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQE 826
Query: 740 VGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEKN 785
VGVVH+ HPV CDPNLDPKQYKMCLGSKAST+ ST QLAE+WLEK+
Sbjct: 827 VGVVHIFHPVHCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEKH 872
Score = 52.4 bits (124), Expect = 2e-06
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGG 60
MA R RR W+SV LGLVLGF AS L+ PR +EL +RR S G++AA G
Sbjct: 1 MAVRSRRPWMSVALGLVLGFTAASWLIAPRVAELSER--KRRGSSLCSYYGRSAAGPRAG 58
Query: 61 AR 62
A+
Sbjct: 59 AQ 60
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 194 bits (493), Expect = 3e-49
Identities = 107/297 (36%), Positives = 170/297 (57%), Gaps = 19/297 (6%)
Query: 496 RINQESGSLSFLS------NSLKKLVPFQLPGS----KSEHKEPKDKKINILIPLSGRFD 545
R ++ G+L L+ + K+L+ F+ G K+E + IN+++PL+ R D
Sbjct: 215 RTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVD 274
Query: 546 MFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPK-ADMQILPV 604
F +FM NF + C+ + V L V+ F + + +V+ + + K + + +
Sbjct: 275 KFRQFMQNFREMCIEQDGRVHLTVVYFGKE----EINEVKGILENTSKAANFRNFTFIQL 330
Query: 605 SGEFSRALALEVGSSQFNNES-LLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
+GEFSR L+VG+ + + LLFFCDVD+ FT+EFL CR NT G+++++P++FSQY
Sbjct: 331 NGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQY 390
Query: 664 DPKIVYS---GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED 720
+P I+Y P + ++TGFWR++GFG+TC Y+ D + +GGFD+ I+GWG ED
Sbjct: 391 NPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGED 450
Query: 721 VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQL 777
V L+ K + + L R+ G+ H+ H C L P+QYKMC+ SKA S QL
Sbjct: 451 VHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQL 507
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase
1 [Homo sapiens]
Length = 532
Score = 194 bits (493), Expect = 3e-49
Identities = 107/297 (36%), Positives = 170/297 (57%), Gaps = 19/297 (6%)
Query: 496 RINQESGSLSFLS------NSLKKLVPFQLPGS----KSEHKEPKDKKINILIPLSGRFD 545
R ++ G+L L+ + K+L+ F+ G K+E + IN+++PL+ R D
Sbjct: 215 RTERDKGTLYELTFKGDHKHEFKRLILFRPFGPIMKVKNEKLNMANTLINVIVPLAKRVD 274
Query: 546 MFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPK-ADMQILPV 604
F +FM NF + C+ + V L V+ F + + +V+ + + K + + +
Sbjct: 275 KFRQFMQNFREMCIEQDGRVHLTVVYFGKE----EINEVKGILENTSKAANFRNFTFIQL 330
Query: 605 SGEFSRALALEVGSSQFNNES-LLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQY 663
+GEFSR L+VG+ + + LLFFCDVD+ FT+EFL CR NT G+++++P++FSQY
Sbjct: 331 NGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPGKKVFYPVLFSQY 390
Query: 664 DPKIVYS---GKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLED 720
+P I+Y P + ++TGFWR++GFG+TC Y+ D + +GGFD+ I+GWG ED
Sbjct: 391 NPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIKGWGGED 450
Query: 721 VDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQL 777
V L+ K + + L R+ G+ H+ H C L P+QYKMC+ SKA S QL
Sbjct: 451 VHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCMDELTPEQYKMCMQSKAMNEASHGQL 507
>gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferase 2
[Homo sapiens]
Length = 542
Score = 182 bits (462), Expect = 1e-45
Identities = 91/259 (35%), Positives = 149/259 (57%), Gaps = 7/259 (2%)
Query: 523 KSEHKEPKDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAK 582
KSE + INI++PL+ R + FV+FM NF C+ ++ + L V+ F + +K
Sbjct: 261 KSEMIDITRSIINIIVPLAERTEAFVQFMQNFRDVCIHQDKKIHLTVVYFGKEG---LSK 317
Query: 583 QVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNN-ESLLFFCDVDLVFTTEFL 641
++ + + ++ ++ EF+R L VG+ ++ E L+FFCDVD+ F+ EFL
Sbjct: 318 VKSILESVTSESNFHNYTLVSLNEEFNRGRGLNVGARAWDKGEVLMFFCDVDIYFSAEFL 377
Query: 642 QRCRANTVLGQQIYFPIIFSQYDPKIVYSGKV---PSDNHFAFTQKTGFWRNYGFGITCI 698
CR N G+++++P++FS Y+P IVY+ + P + + +GFWR++GFG+TC
Sbjct: 378 NSCRLNAEPGKKVFYPVVFSLYNPAIVYANQEVPPPVEQQLVHKKDSGFWRDFGFGMTCQ 437
Query: 699 YKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPK 758
Y+ D + +GGFD+ ++GWG EDV L+ K + L R+ G+ H+ H C L P+
Sbjct: 438 YRSDFLTIGGFDMEVKGWGGEDVHLYRKYLHGDLIVIRTPVPGLFHLWHEKRCADELTPE 497
Query: 759 QYKMCLGSKASTYGSTQQL 777
QY+MC+ SKA S L
Sbjct: 498 QYRMCIQSKAMNEASHSHL 516
>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
Length = 772
Score = 172 bits (437), Expect = 8e-43
Identities = 208/836 (24%), Positives = 335/836 (40%), Gaps = 136/836 (16%)
Query: 8 AWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSG-QAAASQAGGARGDAR 66
A L L L+LG L L L R S ++ G G R G Q S+A + D
Sbjct: 8 ALLRPALPLILGLSLGCSLSLLRVSWIQGEGEDPCVEAVGERGGPQNPDSRARLDQSDED 67
Query: 67 -GAQLWPPGSDPDG---------------GPRDRNFLFVGVMTAQKYLQTRAVAAYRTWS 110
++ P DP+ G R+R L V V+T++ L T AVA RT +
Sbjct: 68 FKPRIVPYYRDPNKPYKKVLRTRYIQTELGSRER--LLVAVLTSRATLSTLAVAVNRTVA 125
Query: 111 KTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMM---LKYMHDHYLDKYEWF 167
P + F G+ + VV S+ ++ +++M L+++H H+ Y+WF
Sbjct: 126 HHFPRLLYFTGQRGARAPAGMQVV-------SHGDERPAWLMSETLRHLHTHFGADYDWF 178
Query: 168 MRADDDVYIKGDRLENFLRSLNSSEPLFLGQTG--LGTTEEMGKLALEPGENFCMGGPGV 225
DD Y++ RL L+ ++ L+LG+ +G E+ +C GG G
Sbjct: 179 FIMQDDTYVQAPRLAALAGHLSINQDLYLGRAEEFIGAGEQA---------RYCHGGFGY 229
Query: 226 IMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNK 285
++SR +L R+ PH+ C ++ + D +GRC+ GV CV ++ QQ Y ++E K
Sbjct: 230 LLSRSLLLRLRPHLDGCRGDILSARPDEWLGRCLIDSLGVGCVSQHQGQQ--YRSFELAK 287
Query: 286 KGYIRDLHNSKIHQAITLHPNKNPPYQYRLH----SYMLSRKISELRHRTIQLHREIVLM 341
+S A +HP YRLH + L R SE+ Q+ R + ++
Sbjct: 288 NRDPEKEGSSAFLSAFAVHPVSEGTLMYRLHKRFSALELERAYSEIEQLQAQI-RNLTVL 346
Query: 342 SKYSNTEIHKEDLQLGIPPSFMRFQPRQREEILEWEFLTGKYLYSAVDGQPPRRGMDSAQ 401
+ + +G+P F P R E+L W++ T ++ +S DG P+ + A
Sbjct: 347 TPEGEAGL---SWPVGLPAP---FTPHSRFEVLGWDYFTEQHTFSCADG-APKCPLQGAS 399
Query: 402 REALDDIVMQVMEMINANAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGK 461
R + D + +E +N + R R + + GYRR +P G EY LDLLL +G
Sbjct: 400 RADVGDALETALEQLNRRYQPRLR-FQKQRLLNGYRRFDPARGMEYTLDLLLECVTQRGH 458
Query: 462 KMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPG 521
+ + LA+R++ L L ++ +P
Sbjct: 459 R----------------------------RALARRVS--------LLRPLSRVEILPMP- 481
Query: 522 SKSEHKEPKDKKINILIP-LSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLF-----NSD 575
+ ++ +++P L F+ F L P ++ L +LL
Sbjct: 482 -----YVTEATRVQLVLPLLVAEAAAAPAFLEAFAANVLEPREHALLTLLLVYGPREGGR 536
Query: 576 SNPD-----KAKQVELMRDYRIKYPKADMQILPVSGEF-SRALALEVGSSQFNNESLLFF 629
PD KA EL R +YP + L V E S+ ++V S + ++L F
Sbjct: 537 GAPDPFLGVKAAAAELER----RYPGTRLAWLAVRAEAPSQVRLMDVVSKKHPVDTLFFL 592
Query: 630 CDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKI---------VYSGKVPSDNHFA 680
V E L RCR N + G Q +FP+ F +++P + +G P A
Sbjct: 593 TTVWTRPGPEVLNRCRMNAISGWQAFFPVHFQEFNPALSPQRSPPGPPGAGPDPPSPPGA 652
Query: 681 FTQK----TGFWRNYGFGITCIYKGDLV--------RVGGFDVSIQGWGLEDVDLFNKVV 728
+ G + C Y D + + G + GLE +D+F +
Sbjct: 653 DPSRGAPIGGRFDRQASAEGCFYNADYLAARARLAGELAGQEEEEALEGLEVMDVFLRF- 711
Query: 729 QAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEK 784
+GL FR+ E G+V C P L + Y C S G QLA E+
Sbjct: 712 -SGLHLFRAVEPGLVQKFSLRDCSPRLSEELYHRCRLSNLEGLGGRAQLAMALFEQ 766
>gi|27545323 chondroitin polymerizing factor [Homo sapiens]
Length = 775
Score = 161 bits (407), Expect = 3e-39
Identities = 176/727 (24%), Positives = 290/727 (39%), Gaps = 99/727 (13%)
Query: 84 RNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSY 143
R L V V+T+Q L T VA RT + V + G + VV L
Sbjct: 116 RQRLLVAVLTSQTTLPTLGVAVNRTLGHRLERVVFLTGARGRRAPPGMAVVTL----GEE 171
Query: 144 PPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLR--SLNSSEPLFLG--QT 199
P + L+++ + + D ++WF D Y + L SL S+ L+LG Q
Sbjct: 172 RPIGHLHLALRHLLEQHGDDFDWFFLVPDTTYTEAHGLARLTGHLSLASAAHLYLGRPQD 231
Query: 200 GLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGRCV 259
+G G+ +C GG GV++SR +L+++ PH+ C ++ + D +GRC+
Sbjct: 232 FIGGEPTPGR--------YCHGGFGVLLSRMLLQQLRPHLEGCRNDIVSARPDEWLGRCI 283
Query: 260 RRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHQAITLHPNKNPPYQYRLHSYM 319
GV C +E + Y + E + +++ + A+T HP ++P + Y+LH
Sbjct: 284 LDATGVGCTGDHE--GVHYSHLELSPGEPVQE-GDPHFRSALTAHPVRDPVHMYQLHKAF 340
Query: 320 LSRKISELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIP-PSFMRFQPRQREEILEWEF 378
++ +L EI S + +GIP PS +P R E+L W++
Sbjct: 341 ARAELERTYQEIQELQWEIQNTSHLAVDGDRAAAWPVGIPAPS----RPASRFEVLRWDY 396
Query: 379 LTGKYLYSAVDGQP--PRRGMDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEIQYGY 436
T ++ +S DG P P RG D A + D++ +E +N R + +++ GY
Sbjct: 397 FTEQHAFSCADGSPRCPLRGADRAD---VADVLGTALEELNRRYHPALR-LQKQQLVNGY 452
Query: 437 RRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAQELAKR 496
RR +P G EY LDL L +G + P+ R L + S+++ +
Sbjct: 453 RRFDPARGMEYTLDLQLEALTPQGGRR--PLTRRVQLLRPLSRVEILP------------ 498
Query: 497 INQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKKINILIPL-SGRFDMFVRFMGNFE 555
VP+ S ++ +L+PL + D+ F+ F
Sbjct: 499 ------------------VPYVTEAS----------RLTVLLPLAAAERDLAPGFLEAFA 530
Query: 556 KTCLIPNQNVKLVVLLFNSDSN------------PDKAKQVELMRDYRIKYPKADMQILP 603
L P + LL + P KA EL R ++P A + L
Sbjct: 531 TAALEPGDAAAALTLLLLYEPRQAQRVAHADVFAPVKAHVAELER----RFPGARVPWLS 586
Query: 604 VSGEFSRALAL-EVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQ 662
V L L ++ S + ++L D V T +FL RCR + + G Q +FP+ F
Sbjct: 587 VQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQA 646
Query: 663 YDPKIV-YSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWG---L 718
+ P + G P + + TG + C Y D V G + L
Sbjct: 647 FHPAVAPPQGPGPPE----LGRDTGRFDRQAASEACFYNSDYVAARGRLAAASEQEEELL 702
Query: 719 EDVDLFNKVVQ-AGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQL 777
E +D++ + + L R+ E ++ + C L Y CL S GS QL
Sbjct: 703 ESLDVYELFLHFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCLQSVLEGLGSRTQL 762
Query: 778 AEMWLEK 784
A + E+
Sbjct: 763 AMLLFEQ 769
>gi|9910144 core 1 synthase, glycoprotein-N-acetylgalactosamine
3-beta-galactosyltransferase, 1 [Homo sapiens]
Length = 363
Score = 81.6 bits (200), Expect = 3e-15
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 20/263 (7%)
Query: 1 MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPR-RRASPEGCRSGQAAASQAG 59
MA++ +L+ L G +GF+L S+L E P P S +
Sbjct: 1 MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE 60
Query: 60 GARG-DARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQ 118
G +A +Q +D + + VMT + L+ +A TW++ KV
Sbjct: 61 GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRC-NKVL 119
Query: 119 FFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKG 178
F SSE + + + G D Y K+F +Y+H+HYL+ +WF++ADDD Y+
Sbjct: 120 FMSSEENKDFPAVGLKTKEGRDQLYWKTIKAF---QYVHEHYLEDADWFLKADDDTYVIL 176
Query: 179 DRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVP- 237
D L L + EP++ G+ + + + GG G ++S+E L+R V
Sbjct: 177 DNLRWLLSKYDPEEPIYFGR----------RFKPYVKQGYMSGGAGYVLSKEALKRFVDA 226
Query: 238 -HIGKCLREMYTTHEDVEVGRCV 259
KC ++ ED+ +GRC+
Sbjct: 227 FKTDKCTHS--SSIEDLALGRCM 247
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 73.2 bits (178), Expect = 9e-13
Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 48/340 (14%)
Query: 419 NAKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQ-QTF 477
N ++RGR + I +R + + G Y+L+L LL +G+++ VR Y+ + +
Sbjct: 682 NQRSRGRY-QLQRIVNVEKRQDQLRGGRYLLELELL---EQGQRV---VRLSEYVSARGW 734
Query: 478 SKIQFVEHEELDAQELAKRI----NQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDKK 533
I EE++A+ L + N+ L+ + K P G H+
Sbjct: 735 QGIDPAGGEEVEARNLQGLVWDPHNRRRQVLNTRAQEPKLCWP---QGFSWSHRAV---- 787
Query: 534 INILIPLSGR---FDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDY 590
++ ++P+ + F++ M N + P+ N+ ++ + D + + A + +R Y
Sbjct: 788 VHFVVPVKNQARWVQQFIKDMENLFQVTGDPHFNI-VITDYSSEDMDVEMALKRSKLRSY 846
Query: 591 RIKYPKADMQILPVSGEFSRALALEVGSSQFNN-ESLLFFCDVDLVFTTEFLQRCRANTV 649
Q + +SG F R+ L+ G + S++F CD+ + F + R + V
Sbjct: 847 ---------QYVKLSGNFERSAGLQAGIDLVKDPHSIIFLCDLHIHFPAGVIDAIRKHCV 897
Query: 650 LGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGF 709
G+ + P++ ++ G P G+W GFG+ IYK DL R+GG
Sbjct: 898 EGKMAFAPMVMR------LHCGATPQ-------WPEGYWEVNGFGLLGIYKSDLDRIGGM 944
Query: 710 DVS--IQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHH 747
+ WG ED +L ++++QAGL R H H
Sbjct: 945 NTKEFRDRWGGEDWELLDRILQAGLDVERLSLRNFFHHFH 984
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 73.2 bits (178), Expect = 9e-13
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 530 KDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRD 589
+D ++ ++P+ + +F+ + + VVL+ + D + + R
Sbjct: 820 QDVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARL 879
Query: 590 YRIKYPKADMQILPVSGEFSRALALEVGSSQFNN-ESLLFFCDVDLVFTTEFLQRCRANT 648
R +Y L +G F R+ L+ G + S++F CD+ + F L R +
Sbjct: 880 PRYQY-------LRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHC 932
Query: 649 VLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGG 708
V G+ + P++ + G P D H G+W GFG+ IYK D RVGG
Sbjct: 933 VEGRLAFAPVVMR------LSCGSSPRDPH-------GYWEVNGFGLFGIYKSDFDRVGG 979
Query: 709 FDVS--IQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHH 747
+ WG ED +L ++V+QAGL+ R + H +H
Sbjct: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYH 1020
>gi|154689817 beta 1,3-galactosyltransferase-like [Homo sapiens]
Length = 498
Score = 67.4 bits (163), Expect = 5e-11
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 81 PRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVD 140
P + +FV V T +K+ R +TW ++++S + ++ S+P + + D
Sbjct: 263 PVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQA-SLIEYYS-DYTENSIPTVDLGIPNTD 320
Query: 141 DSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT- 199
+ K+F +L+ + DK W + DDD I RL++ L +S EP+FLG+
Sbjct: 321 RGHCG--KTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERY 378
Query: 200 --GLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
GLGT G ++ GG G++ SRE +RR++ KC +D+ +G
Sbjct: 379 GYGLGT----------GGYSYITGGGGMVFSREAVRRLL--ASKCRCYSNDAPDDMVLGM 426
Query: 258 C 258
C
Sbjct: 427 C 427
>gi|239757870 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 61.6 bits (148), Expect = 3e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 708 GFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSK 767
GFD+ ++GWG EDV L+ K ++ L R+ G+ H+ H C L P+QY+MC+ SK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 768 ASTYGSTQQL 777
A S L
Sbjct: 107 AMDEASRSHL 116
>gi|239752388 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 61.6 bits (148), Expect = 3e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 708 GFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSK 767
GFD+ ++GWG EDV L+ K ++ L R+ G+ H+ H C L P+QY+MC+ SK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 768 ASTYGSTQQL 777
A S L
Sbjct: 107 AMDEASRSHL 116
>gi|239746905 PREDICTED: novel protein similar to chondroitin
sulfate GalNAcT-2 (GALNACT-2) [Homo sapiens]
Length = 142
Score = 61.6 bits (148), Expect = 3e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 708 GFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSK 767
GFD+ ++GWG EDV L+ K ++ L R+ G+ H+ H C L P+QY+MC+ SK
Sbjct: 47 GFDMEVKGWGGEDVHLYRKYLRGDLIVIRNPVPGLFHLWHEKHCADELTPEQYRMCIQSK 106
Query: 768 ASTYGSTQQL 777
A S L
Sbjct: 107 AMDEASRSHL 116
>gi|58532584 C1GALT1-specific chaperone 1 [Homo sapiens]
Length = 318
Score = 54.7 bits (130), Expect = 3e-07
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 51/218 (23%)
Query: 104 AAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDK 163
A TW+K K +FFSSE I + +D + +K++ KY D Y D+
Sbjct: 85 AVKETWTKHCD-KAEFFSSENVKVFESINM----DTNDMWLMMRKAY---KYAFDKYRDQ 136
Query: 164 YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT-GLGTTEEMGKLALEPGENFCMGG 222
Y WF A + + L+ FL + S+P +LG T G E +G M G
Sbjct: 137 YNWFFLARPTTFAIIENLKYFLLKKDPSQPFYLGHTIKSGDLEYVG-----------MEG 185
Query: 223 PGVIMSREVLRRM-----VPHIGKCLRE---MYTTHEDVEVGRCVRRFAGVQCVWSYEMQ 274
G+++S E ++R+ +P KC + ++ ED ++ C+ ++AGV
Sbjct: 186 -GIVLSVESMKRLNSLLNIPE--KCPEQGGMIWKISEDKQLAVCL-KYAGV--------- 232
Query: 275 QLFYENYEQNKKGYIRDLHNSK-----IHQAITLHPNK 307
F EN E +D+ N+K I +A+T HPN+
Sbjct: 233 --FAENAEDADG---KDVFNTKSVGLSIKEAMTYHPNQ 265
>gi|23097329 C1GALT1-specific chaperone 1 [Homo sapiens]
Length = 318
Score = 54.7 bits (130), Expect = 3e-07
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 51/218 (23%)
Query: 104 AAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYPPQKKSFMMLKYMHDHYLDK 163
A TW+K K +FFSSE I + +D + +K++ KY D Y D+
Sbjct: 85 AVKETWTKHCD-KAEFFSSENVKVFESINM----DTNDMWLMMRKAY---KYAFDKYRDQ 136
Query: 164 YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQT-GLGTTEEMGKLALEPGENFCMGG 222
Y WF A + + L+ FL + S+P +LG T G E +G M G
Sbjct: 137 YNWFFLARPTTFAIIENLKYFLLKKDPSQPFYLGHTIKSGDLEYVG-----------MEG 185
Query: 223 PGVIMSREVLRRM-----VPHIGKCLRE---MYTTHEDVEVGRCVRRFAGVQCVWSYEMQ 274
G+++S E ++R+ +P KC + ++ ED ++ C+ ++AGV
Sbjct: 186 -GIVLSVESMKRLNSLLNIPE--KCPEQGGMIWKISEDKQLAVCL-KYAGV--------- 232
Query: 275 QLFYENYEQNKKGYIRDLHNSK-----IHQAITLHPNK 307
F EN E +D+ N+K I +A+T HPN+
Sbjct: 233 --FAENAEDADG---KDVFNTKSVGLSIKEAMTYHPNQ 265
>gi|93141005 lunatic fringe isoform b [Homo sapiens]
Length = 361
Score = 48.9 bits (115), Expect = 2e-05
Identities = 78/335 (23%), Positives = 127/335 (37%), Gaps = 55/335 (16%)
Query: 13 LLGLVLGFVLASRLVL-------PRASELKRAGPRRRASPEGCRSGQ---AAASQAGGAR 62
LL + G +LA LVL P +E R R A P G AAA+ G
Sbjct: 9 LLLALAGALLACLLVLTADPPPPPLPAERGRRALRSLAGPAGAAPAPGLGAAAAAPGALV 68
Query: 63 GDARGAQLW-------------PPGSDP---DGGPRDR------NFLFVGVMTAQKYLQT 100
D + PPG+ P DG PR +F+ V T +K+ +
Sbjct: 69 RDVHSLSEYFSLLTRARRDAGPPPGAAPRPADGHPRPLAEPLAPRDVFIAVKTTKKFHRA 128
Query: 101 RAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPV--VPLRGVDDSYPPQKKSFMMLKYMHD 158
R TW ++ F ++G D ++ V + ++ Q S M +D
Sbjct: 129 RLDLLLETWISRHK-EMTFIFTDGEDEALARHTGNVVITNCSAAHSRQALSCKMA-VEYD 186
Query: 159 HYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLG----TTEEMGKLALE 213
+++ +WF DDD Y+ L L S + +++G+ L E + + +
Sbjct: 187 RFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENKVR 246
Query: 214 PGEN-FCMGGPGVIMSREVLRRMVPHIG----KCLREMYTTHEDVEVGRCVRRFAGVQCV 268
P F GG G +SR + +M P E +D +G V GV +
Sbjct: 247 PVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEALLGVPLI 306
Query: 269 WSYEMQQLFYENYEQNKKGYIRDLHNSKIHQAITL 303
S LF+ + E ++ + S++H+ +TL
Sbjct: 307 RS----GLFHSHLEN-----LQQVPTSELHEQVTL 332
>gi|93140999 lunatic fringe isoform a [Homo sapiens]
Length = 379
Score = 48.9 bits (115), Expect = 2e-05
Identities = 78/335 (23%), Positives = 127/335 (37%), Gaps = 55/335 (16%)
Query: 13 LLGLVLGFVLASRLVL-------PRASELKRAGPRRRASPEGCRSGQ---AAASQAGGAR 62
LL + G +LA LVL P +E R R A P G AAA+ G
Sbjct: 9 LLLALAGALLACLLVLTADPPPPPLPAERGRRALRSLAGPAGAAPAPGLGAAAAAPGALV 68
Query: 63 GDARGAQLW-------------PPGSDP---DGGPRDR------NFLFVGVMTAQKYLQT 100
D + PPG+ P DG PR +F+ V T +K+ +
Sbjct: 69 RDVHSLSEYFSLLTRARRDAGPPPGAAPRPADGHPRPLAEPLAPRDVFIAVKTTKKFHRA 128
Query: 101 RAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPV--VPLRGVDDSYPPQKKSFMMLKYMHD 158
R TW ++ F ++G D ++ V + ++ Q S M +D
Sbjct: 129 RLDLLLETWISRHK-EMTFIFTDGEDEALARHTGNVVITNCSAAHSRQALSCKMA-VEYD 186
Query: 159 HYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLG----TTEEMGKLALE 213
+++ +WF DDD Y+ L L S + +++G+ L E + + +
Sbjct: 187 RFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMERVSENKVR 246
Query: 214 PGEN-FCMGGPGVIMSREVLRRMVPHIG----KCLREMYTTHEDVEVGRCVRRFAGVQCV 268
P F GG G +SR + +M P E +D +G V GV +
Sbjct: 247 PVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEALLGVPLI 306
Query: 269 WSYEMQQLFYENYEQNKKGYIRDLHNSKIHQAITL 303
S LF+ + E ++ + S++H+ +TL
Sbjct: 307 RS----GLFHSHLEN-----LQQVPTSELHEQVTL 332
>gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 48.1 bits (113), Expect = 3e-05
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 34/158 (21%)
Query: 586 LMRDYRIKYPKADMQILPVSGE--FSRALALEVGSSQFNNESLLFFC----DVDLV-FTT 638
++R R++Y + ++ GE F+RA L VG + E + C DVDLV
Sbjct: 168 ILRRQRLRY---GVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDD 224
Query: 639 EFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCI 698
L RC Q +F I ++ ++ Y+G Y G++ +
Sbjct: 225 RNLYRCG-----DQPRHFAIAMDKFGFRLPYAG-------------------YFGGVSGL 260
Query: 699 YKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFR 736
K +R+ GF GWG ED D+FN++ G+K R
Sbjct: 261 SKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISR 298
>gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 48.1 bits (113), Expect = 3e-05
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 34/158 (21%)
Query: 586 LMRDYRIKYPKADMQILPVSGE--FSRALALEVGSSQFNNESLLFFC----DVDLV-FTT 638
++R R++Y + ++ GE F+RA L VG + E + C DVDLV
Sbjct: 168 ILRRQRLRY---GVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDD 224
Query: 639 EFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCI 698
L RC Q +F I ++ ++ Y+G Y G++ +
Sbjct: 225 RNLYRCG-----DQPRHFAIAMDKFGFRLPYAG-------------------YFGGVSGL 260
Query: 699 YKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFR 736
K +R+ GF GWG ED D+FN++ G+K R
Sbjct: 261 SKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISR 298
>gi|74271816 radical fringe [Homo sapiens]
Length = 331
Score = 44.7 bits (104), Expect = 3e-04
Identities = 72/298 (24%), Positives = 113/298 (37%), Gaps = 56/298 (18%)
Query: 3 ARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRSGQAAASQAGGAR 62
ARG + L L +L L LPRA P R +P A +A +R
Sbjct: 4 ARGALCRACLALAAALAALLLLPLPLPRAP-----APARTPAP---------APRAPPSR 49
Query: 63 GDARGAQLWPPGSDPDGGPRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSS 122
A P PD +F+ V T +K R RTW + F +
Sbjct: 50 PAA-------PSLRPDD-------VFIAVKTTRKNHGPRLRLLLRTWISRARQQT-FIFT 94
Query: 123 EGSDTSVPIPVVPLRGVD-------DSYPPQKKSFMMLKYMHDHYLDK-YEWFMRADDDV 174
+G D P + L+G D + ++ + +D +++ +WF DDD
Sbjct: 95 DGDD-----PELELQGGDRVINTNCSAVRTRQALCCKMSVEYDKFIESGRKWFCHVDDDN 149
Query: 175 YIKGDRLENFLRSLNSSEPLFLGQTGLG----TTEEM--GKLALEPGENFCMGGPGVIMS 228
Y+ L + L S + S+ ++LG+ L TE + G+ F GG G +S
Sbjct: 150 YVNARSLLHLLSSFSPSQDVYLGRPSLDHPIEATERVQGGRTVTTVKFWFATGGAGFCLS 209
Query: 229 REVLRRMVP--HIGKCL--REMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYE 282
R + +M P +G + E +D VG V G + + S LF+ + E
Sbjct: 210 RGLALKMSPWASLGSFMSTAEQVRLPDDCTVGYIVEGLLGARLLHS----PLFHSHLE 263
>gi|157412240 C1GALT1-specific chaperone 1-like [Homo sapiens]
Length = 315
Score = 40.0 bits (92), Expect = 0.009
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 154 KYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALE 213
KY+ + Y D Y WF A + + L+ L + ++S+P +LG T + G L
Sbjct: 125 KYVFEKYGDNYNWFFLALPTTFAVIENLKYLLFTRDASQPFYLGHTVI-----FGDLEYV 179
Query: 214 PGENFCMGGPGVIMSREV---LRRMVPHIGKCLRE--MYTTHEDVEVGRCVRRFAGVQC- 267
E G+++SRE+ L R++ + C + ++ ED ++ C+ ++AGV
Sbjct: 180 TVEG------GIVLSRELMKRLNRLLDNSETCADQSVIWKLSEDKQLAICL-KYAGVHAE 232
Query: 268 -VWSYEMQQLF 277
YE + +F
Sbjct: 233 NAEDYEGRDVF 243
>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
membrane-bound form [Homo sapiens]
Length = 398
Score = 38.1 bits (87), Expect = 0.033
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 22/123 (17%)
Query: 633 DLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFT---------- 682
D +F L L Y +FS D +P ++H A+
Sbjct: 219 DTIFNRAKLLNVGFQEALKDYDYTCFVFSDVD-------LIPMNDHNAYRCFSQPRHISV 271
Query: 683 --QKTGF---WRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRS 737
K GF + Y G++ + K + + GF + GWG ED D+FN++V G+ R
Sbjct: 272 AMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRP 331
Query: 738 QEV 740
V
Sbjct: 332 NAV 334
>gi|239749709 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 37.0 bits (84), Expect = 0.073
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 35 KRAGPRRRASPEGCRSGQAAASQAGGARGDARGAQLWPPGSDPDG 79
+RAG R SP+GCR+G A +AGG AR PP P G
Sbjct: 138 RRAGAARTRSPKGCRAGAARLERAGGPAAPAR----VPPARCPAG 178
>gi|15451877 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 148 KSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEM 207
K+ M +++ + + ++ M+ D DV+I L +L +LN SE F G +
Sbjct: 158 KTIMAFRWVTE-FCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYR 216
Query: 208 G----------KLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
G + + +C G G IMSR+++ R+ +G + EDV VG
Sbjct: 217 GFYQKTHISYQEYPFKVFPPYC-SGLGYIMSRDLVPRIYEMMGHVKPIKF---EDVYVGI 272
Query: 258 CV 259
C+
Sbjct: 273 CL 274
>gi|15451875 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 148 KSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEM 207
K+ M +++ + + ++ M+ D DV+I L +L +LN SE F G +
Sbjct: 158 KTIMAFRWVTE-FCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYR 216
Query: 208 G----------KLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
G + + +C G G IMSR+++ R+ +G + EDV VG
Sbjct: 217 GFYQKTHISYQEYPFKVFPPYC-SGLGYIMSRDLVPRIYEMMGHVKPIKF---EDVYVGI 272
Query: 258 CV 259
C+
Sbjct: 273 CL 274
>gi|84452146 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 148 KSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEM 207
K+ M +++ + + ++ M+ D DV+I L +L +LN SE F G +
Sbjct: 158 KTIMAFRWVTE-FCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYR 216
Query: 208 G----------KLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
G + + +C G G IMSR+++ R+ +G + EDV VG
Sbjct: 217 GFYQKTHISYQEYPFKVFPPYC-SGLGYIMSRDLVPRIYEMMGHVKPIKF---EDVYVGI 272
Query: 258 CV 259
C+
Sbjct: 273 CL 274
>gi|15451879 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 148 KSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEM 207
K+ M +++ + + ++ M+ D DV+I L +L +LN SE F G +
Sbjct: 158 KTIMAFRWVTE-FCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYR 216
Query: 208 G----------KLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
G + + +C G G IMSR+++ R+ +G + EDV VG
Sbjct: 217 GFYQKTHISYQEYPFKVFPPYC-SGLGYIMSRDLVPRIYEMMGHVKPIKF---EDVYVGI 272
Query: 258 CV 259
C+
Sbjct: 273 CL 274
>gi|4502343 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 1
[Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.28
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 15/122 (12%)
Query: 148 KSFMMLKYMHDHYLDKYEWFMRADDDVYIKGDRLENFLRSLNSSEPLFLGQTGLGTTEEM 207
K+ M +++ + + ++ M+ D DV+I L +L +LN SE F G +
Sbjct: 158 KTIMAFRWVTE-FCPNAKYVMKTDTDVFINTGNLVKYLLNLNHSEKFFTGYPLIDNYSYR 216
Query: 208 G----------KLALEPGENFCMGGPGVIMSREVLRRMVPHIGKCLREMYTTHEDVEVGR 257
G + + +C G G IMSR+++ R+ +G + EDV VG
Sbjct: 217 GFYQKTHISYQEYPFKVFPPYC-SGLGYIMSRDLVPRIYEMMGHVKPIKF---EDVYVGI 272
Query: 258 CV 259
C+
Sbjct: 273 CL 274
>gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo
sapiens]
Length = 1503
Score = 35.0 bits (79), Expect = 0.28
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 368 RQREEILEWEFLTGKYLYS---AVDGQPPRRGMDSAQREALDDIVMQVMEMINANAKTRG 424
R+ ++ +W K L+ +V P + +S +A+D+I Q + + + G
Sbjct: 17 RKEDKERKWNLTEVKELHETLQSVPDVPVKEDTNSVVEKAMDEIKSQELNLEGQRKISPG 76
Query: 425 RIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKK--HKGKKMT---VPVRRHAYLQQTFSK 479
I D K G + + LD L K H KK + R A Q+ K
Sbjct: 77 SIKDSKTEASGNIAIRKSAKVIFALDETELKSKPEHTWKKNLFERMEARAQAMQQKIIDK 136
Query: 480 IQFVEHEELDAQE------LAKR-INQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKDK 532
+ E A++ LAK N +S +L+ + L KL+P +PG ++ + + K
Sbjct: 137 ENLKKELEKKAEKKLPRDNLAKEWFNTDSMTLNNTAYLLDKLLPTLVPGVENMLTQVEKK 196
Query: 533 KINILIPLSGRFDMFVRFMGNF 554
K+ +FD + ++G +
Sbjct: 197 KVLTEADTPSKFDP-INYLGEY 217
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,090,162
Number of Sequences: 37866
Number of extensions: 1435277
Number of successful extensions: 4220
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 4145
Number of HSP's gapped (non-prelim): 78
length of query: 802
length of database: 18,247,518
effective HSP length: 110
effective length of query: 692
effective length of database: 14,082,258
effective search space: 9744922536
effective search space used: 9744922536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.