EFCAB5 37198

Name: EFCAB5	Sequence: fasta or formatted (1503aa)		NCBI GI: 90652855
Description: EF-hand calcium binding domain 5 isoform a		Not currently referenced in the text
Other entries for this name: alt prot {856aa} EF-hand calcium binding domain 5 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 63 2 C cysteine 1.1 17 1 D aspartate 4.6 69 2 E glutamate 10.9 164 3 F phenylalanine 4.2 63 2 G glycine 4.5 68 1 H histidine 2.9 43 1 I isoleucine 5.7 86 2 K lysine 7.9 118 3 L leucine 9.6 144 3 M methionine 2.5 37 2 N asparagine 4.6 69 2 P proline 4.1 61 2 Q glutamine 6.0 90 3 R arginine 4.8 72 2 S serine 7.8 117 2 T threonine 4.9 74 2 V valine 6.0 90 2 W tryptophan 1.1 16 1 Y tyrosine 2.8 42 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 EF-hand calcium binding domain 5 isoform a EFCAB5 0.529 EF-hand calcium binding domain 5 isoform b WDR87 0.011 NYD-SP11 protein CENPF 0.010 centromere protein F RIF1 0.008 RAP1 interacting factor 1 CENPE 0.008 centromere protein E PLEC1 0.008 plectin 1 isoform 11 PLEC1 0.008 plectin 1 isoform 10 PLEC1 0.008 plectin 1 isoform 8 PLEC1 0.008 plectin 1 isoform 7 PLEC1 0.008 plectin 1 isoform 6 PLEC1 0.008 plectin 1 isoform 3 PLEC1 0.008 plectin 1 isoform 2 PLEC1 0.008 plectin 1 isoform 1 LOC727832 0.008 golgi autoantigen, golgin subfamily a-like TRIP11 0.007 thyroid hormone receptor interactor 11 PALM3 0.007 hypothetical protein LOC342979 ATRX 0.007 transcriptional regulator ATRX isoform 2 ATRX 0.007 transcriptional regulator ATRX isoform 1 MYH11 0.007 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.007 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.007 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.007 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CRNN 0.007 cornulin CALD1 0.007 caldesmon 1 isoform 1 GOLGA4 0.006 golgi autoantigen, golgin subfamily a, 4 MAP7D1 0.006 MAP7 domain containing 1 LIPE 0.006 hormone-sensitive lipase KANK1 0.006 KN motif and ankyrin repeat domains 1 isoform b [Hom... KANK1 0.006 KN motif and ankyrin repeat domains 1 isoform a [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.