CHPF 24428

Name: CHPF	Sequence: fasta or formatted (775aa)		NCBI GI: 27545323
Description: chondroitin polymerizing factor		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 86 4 C cysteine 1.4 11 1 D aspartate 4.3 33 2 E glutamate 6.8 53 3 F phenylalanine 3.6 28 2 G glycine 7.9 61 2 H histidine 3.9 30 1 I isoleucine 1.5 12 1 K lysine 1.0 8 2 L leucine 13.8 107 4 M methionine 1.2 9 1 N asparagine 1.5 12 1 P proline 8.3 64 2 Q glutamine 4.8 37 2 R arginine 9.2 71 2 S serine 4.9 38 2 T threonine 5.0 39 2 V valine 6.2 48 2 W tryptophan 1.2 9 1 Y tyrosine 2.5 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chondroitin polymerizing factor CHPF2 0.532 chondroitin polymerizing factor 2 CHSY1 0.088 chondroitin sulfate synthase 1 CHSY3 0.087 chondroitin sulfate synthase 3 CSGALNACT2 0.028 chondroitin sulfate N-acetylgalactosaminyltransferas... CSGALNACT1 0.023 chondroitin sulfate N-acetylgalactosaminyltransfera... CSGALNACT1 0.023 chondroitin sulfate N-acetylgalactosaminyltransfera... C1GALT1 0.009 core 1 synthase, glycoprotein-N-acetylgalactosamine 3... LOC644504 0.008 PREDICTED: novel protein similar to chondroitin sul... LOC644504 0.008 PREDICTED: novel protein similar to chondroitin sul... LOC644504 0.008 PREDICTED: novel protein similar to chondroitin sul... B4GALNT4 0.008 beta 1,4-N-acetylgalactosaminyltransferase-transfera... LOC728819 0.008 C1GALT1-specific chaperone 1-like DLEU7 0.006 deleted in lymphocytic leukemia, 7 RADIL 0.006 Rap GTPase interactor COL1A1 0.006 alpha 1 type I collagen preproprotein ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 ZFHX2 0.006 PREDICTED: zinc finger homeobox 2 ATP8B3 0.005 ATPase, class I, type 8B, member 3 ZNF282 0.005 zinc finger protein 282 LOC147646 0.005 PREDICTED: hypothetical protein LOC147646 0.005 PREDICTED: hypothetical protein LOC147646 0.005 PREDICTED: hypothetical protein POLR2A 0.005 DNA-directed RNA polymerase II A C2orf55 0.005 hypothetical protein LOC343990 OCEL1 0.005 occludin/ELL domain containing 1 LOC100131320 0.005 PREDICTED: hypothetical protein isoform 1 FGFRL1 0.005 fibroblast growth factor receptor-like 1 precursor [... FGFRL1 0.005 fibroblast growth factor receptor-like 1 precursor [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.