LOC644504 21203

Name: LOC644504	Sequence: fasta or formatted (142aa)		NCBI GI: 239752388
Description: PREDICTED: novel protein similar to chondroitin sulfate GalNAcT-2 (GALNACT-2)		Not currently referenced in the text
Other entries for this name: alt mRNA {142aa} PREDICTED: novel protein similar to chondroitin sulfate GalNAcT-2... alt mRNA {142aa} PREDICTED: novel protein similar to chondroitin sulfate GalNAcT-2...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 8 1 C cysteine 2.1 3 1 D aspartate 4.9 7 1 E glutamate 8.5 12 2 F phenylalanine 3.5 5 1 G glycine 7.7 11 2 H histidine 6.3 9 1 I isoleucine 3.5 5 1 K lysine 6.3 9 1 L leucine 8.5 12 1 M methionine 6.3 9 1 N asparagine 2.1 3 1 P proline 3.5 5 2 Q glutamine 2.8 4 1 R arginine 5.6 8 1 S serine 5.6 8 1 T threonine 4.2 6 1 V valine 6.3 9 1 W tryptophan 2.8 4 1 Y tyrosine 3.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: novel protein similar to chondroitin sul... LOC644504 1.000 PREDICTED: novel protein similar to chondroitin sul... LOC644504 1.000 PREDICTED: novel protein similar to chondroitin sul... CSGALNACT2 0.612 chondroitin sulfate N-acetylgalactosaminyltransferas... CSGALNACT1 0.464 chondroitin sulfate N-acetylgalactosaminyltransfera... CSGALNACT1 0.464 chondroitin sulfate N-acetylgalactosaminyltransfera... CHSY3 0.158 chondroitin sulfate synthase 3 CHSY1 0.133 chondroitin sulfate synthase 1 CHPF 0.047 chondroitin polymerizing factor GPAT2 0.014 glycerol-3-phosphate acyltransferase 2, mitochondri... B4GALNT3 0.014 beta 1,4-N-acetylgalactosaminyltransferase-transfera... GALNT14 0.014 N-acetylgalactosaminyltransferase 14 A2ML1 0.014 alpha-2-macroglobulin-like 1 B4GALNT4 0.011 beta 1,4-N-acetylgalactosaminyltransferase-transfera... DEPDC5 0.011 DEP domain containing 5 isoform 3 DEPDC5 0.011 DEP domain containing 5 isoform 2 DEPDC5 0.011 DEP domain containing 5 isoform 1 B4GALT3 0.011 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... B4GALT1 0.007 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... MUC16 0.004 mucin 16 GALNT3 0.004 polypeptide N-acetylgalactosaminyltransferase 3 [Ho... DMXL2 0.004 Dmx-like 2 B4GALT4 0.004 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4... B4GALT4 0.004 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.