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Search of human proteins with 31377650
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens]
(366 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens] 728 0.0
gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens] 683 0.0
gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens] 625 e-179
gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens] 625 e-179
gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens] 573 e-164
gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens] 367 e-102
gi|118572606 hemicentin 1 [Homo sapiens] 47 3e-05
gi|110349719 titin isoform N2-A [Homo sapiens] 42 9e-04
gi|10835203 advanced glycosylation end product-specific receptor... 41 0.002
gi|13489095 sialoadhesin precursor [Homo sapiens] 41 0.002
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 40 0.003
gi|4758822 nephrin precursor [Homo sapiens] 40 0.004
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 40 0.004
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 40 0.004
gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens] 40 0.004
gi|166295173 kin of IRRE like [Homo sapiens] 39 0.010
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens] 37 0.021
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 37 0.028
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.037
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.037
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.037
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 35 0.081
gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.11
gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.11
gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.11
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 35 0.14
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 35 0.14
gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens] 34 0.24
>gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens]
Length = 366
Score = 728 bits (1879), Expect = 0.0
Identities = 366/366 (100%), Positives = 366/366 (100%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
Query: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
Query: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 360
NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS
Sbjct: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 360
Query: 361 SDEIWL 366
SDEIWL
Sbjct: 361 SDEIWL 366
>gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens]
Length = 351
Score = 683 bits (1762), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
Query: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
Query: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 343
NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 343
>gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 625 bits (1611), Expect = e-179
Identities = 322/366 (87%), Positives = 322/366 (87%), Gaps = 44/366 (12%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP---------------- 224
Query: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 225 ----------------------------GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 256
Query: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 360
NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS
Sbjct: 257 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 316
Query: 361 SDEIWL 366
SDEIWL
Sbjct: 317 SDEIWL 322
>gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 625 bits (1611), Expect = e-179
Identities = 322/366 (87%), Positives = 322/366 (87%), Gaps = 44/366 (12%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP---------------- 224
Query: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 225 ----------------------------GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 256
Query: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 360
NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS
Sbjct: 257 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVS 316
Query: 361 SDEIWL 366
SDEIWL
Sbjct: 317 SDEIWL 322
>gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens]
Length = 306
Score = 573 bits (1478), Expect = e-164
Identities = 298/343 (86%), Positives = 298/343 (86%), Gaps = 45/343 (13%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP---------------- 224
Query: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 225 ----------------------------GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 256
Query: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 343
NLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 257 NLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQG 298
>gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens]
Length = 218
Score = 367 bits (942), Expect = e-102
Identities = 194/238 (81%), Positives = 194/238 (81%), Gaps = 44/238 (18%)
Query: 129 KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP 188
KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP
Sbjct: 25 KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP 84
Query: 189 WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVVAAGLALGT 248
WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPG
Sbjct: 85 WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPG----------------------- 121
Query: 249 LVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLT 308
PSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLT
Sbjct: 122 ---------------------PSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLT 160
Query: 309 PDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVSSDEIWL 366
PDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVSSDEIWL
Sbjct: 161 PDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGFIRLPVLGYIYRVSSVSSDEIWL 218
Score = 48.1 bits (113), Expect = 1e-05
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 1 MALPPGPAALRHTLLLLPALLSS 23
MALPPGPAALRHTLLLLPALLSS
Sbjct: 1 MALPPGPAALRHTLLLLPALLSS 23
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 47.0 bits (110), Expect = 3e-05
Identities = 52/193 (26%), Positives = 75/193 (38%), Gaps = 24/193 (12%)
Query: 30 PQIDGQTWAERA-LRENERHAFTCRVAGGPGTPRLAWYLDGQ-LQEASTSRLLSVGGEAF 87
P I G+ E ++E + TC V G P P + W+ DGQ LQE ++S
Sbjct: 2478 PHIVGENTLEDVKVKEKQSVTLTCEVTGNP-VPEITWHKDGQPLQEDEAHHIIS------ 2530
Query: 88 SGGTSTFTVTAHRAQH--ELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGP 145
G +T + H C P +S + S LNV P IA VG+
Sbjct: 2531 --GGRFLQITNVQVPHTGRYTCLASSPAGHKSRSFS--LNVFVSPTIAGVGSDGNPEDVT 2586
Query: 146 GLLVVLFALV---RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSL 202
+L +LV + PPA +TW P+ N + ++ + L
Sbjct: 2587 VILNSPTSLVCEAYSYPPATITWFKDGTPLESNRNIRILPGGRTLQILNAQ------EDN 2640
Query: 203 AHNLSVVATNDVG 215
A S VATN+ G
Sbjct: 2641 AGRYSCVATNEAG 2653
Score = 31.6 bits (70), Expect = 1.2
Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 29/147 (19%)
Query: 45 NERHAFTCRVAGGPGTPRLAWYLDGQ-LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQH 103
N+ C +G P PR +W DGQ L E + LS G R
Sbjct: 2887 NKSALIECLSSGSPA-PRNSWQKDGQPLLEDDHHKFLSNG----------------RILQ 2929
Query: 104 ELNCSLQD--------PRSGRSANASVILNVQFKPEIAQVGAKYQEAQGP-GLLVVLFAL 154
LN + D + SA LNV P + +G K + + L
Sbjct: 2930 ILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSV--IGPKSENLTVVVNNFISLTCE 2987
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLV 181
V PP +++W+ + P+ +NT+ +V
Sbjct: 2988 VSGFPPPDLSWLKNEQPIKLNTNTLIV 3014
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 29/131 (22%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGG------EAFSGGTSTFTV----TAHRA 101
C V G P P + W DGQL + + + G +A T + TA
Sbjct: 1756 CHVTGSP-PPTIMWLKDGQLIDERDGFKILLNGRKLVIAQAQVSNTGLYRCMAANTAGDH 1814
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
+ E ++ P + +S+ S + V++KP V L + P
Sbjct: 1815 KKEFEVTVHVPPTIKSSGLSERVVVKYKP------------------VALQCIANGIPNP 1856
Query: 162 NVTWIDQDGPV 172
++TW+ D PV
Sbjct: 1857 SITWLKDDQPV 1867
Score = 28.9 bits (63), Expect = 7.6
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 10/141 (7%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQD 111
C+ AG P P + WY D +L STS G+ ++ + +N
Sbjct: 1942 CKAAGNP-VPVITWYKDNRLLSGSTSMTFLNRGQIIDIESAQISDAGIYKCVAIN----- 1995
Query: 112 PRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGP 171
S + L V P I+ G+ A V L R P ++TW+ P
Sbjct: 1996 --SAGATELFYSLQVHVAPSIS--GSNNMVAVVVNNPVRLECEARGIPAPSLTWLKDGSP 2051
Query: 172 VTVNTSDFLVLDAQNYPWLTN 192
V+ ++ VL LT+
Sbjct: 2052 VSSFSNGLQVLSGGRILALTS 2072
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 42.0 bits (97), Expect = 9e-04
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 18/130 (13%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
LR + F C++ G P R++WYLDG A + G +F G +TF ++ R
Sbjct: 4873 LRNGQSTTFECQITGTPKI-RVSWYLDGNEITA-----IQKHGISFIDGLATFQISGARV 4926
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKP----EIAQVG-AKYQEAQGPGLLVVLFALVR 156
++ + +A+ S+ L V+ P E+ V KY + V L V
Sbjct: 4927 ENSGTYVCEARNDAGTASCSIELKVKEPPTFIRELKPVEVVKYSD-------VELECEVT 4979
Query: 157 ANPPANVTWI 166
PP VTW+
Sbjct: 4980 GTPPFEVTWL 4989
Score = 32.3 bits (72), Expect = 0.69
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 44 ENERHAFTCRVAGGPGTPRLAWYLDGQL 71
E E F CRV G P P++ WYL+GQL
Sbjct: 1854 EGETARFRCRVTGYP-QPKVNWYLNGQL 1880
Score = 30.8 bits (68), Expect = 2.0
Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 36/191 (18%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYL-DGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHR 100
L++ + C+V G P ++ W+ D +++E+S R+ V A T
Sbjct: 4311 LKKGDATQLACKVTGTPPI-KITWFANDREIKESSKHRMSFVESTA----VLRLTDVGIE 4365
Query: 101 AQHELNCSLQDPRSGRSANASVILNV------QFKPEIAQVGAKYQEAQGPGLLVVLFAL 154
E C Q+ ++ VI+ +FKP +V +Y V+L A
Sbjct: 4366 DSGEYMCEAQNEAGSDHCSSIVIVKESPYFTKEFKP--IEVLKEYD--------VMLLAE 4415
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLVLDAQNY-PWLTNHTVQLQLRSL----AHNLSVV 209
V PP +TW NT ++ + Y ++ +H V LQ+ A
Sbjct: 4416 VAGTPPFEITWFKD------NT---ILRSGRKYKTFIQDHLVSLQILKFVAADAGEYQCR 4466
Query: 210 ATNDVGVTSAS 220
TN+VG + S
Sbjct: 4467 VTNEVGSSICS 4477
Score = 30.4 bits (67), Expect = 2.6
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 23/176 (13%)
Query: 52 CRVAGGPGTPRLAWYL-DGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
C++AG P ++WY D +L+ +T ++ A T F E C +
Sbjct: 7982 CQLAGTPEIG-VSWYKGDTKLRPTTTYKMHFRNNVA----TLVFNQVDINDSGEYICKAE 8036
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGP-GLLVVLFALVRANPPANVTWIDQD 169
+ S +AS L VQ + + ++ Q GL VV + + P +V+W
Sbjct: 8037 N--SVGEVSASTFLTVQEQKLPPSFSRQLRDVQETVGLPVVFDCAISGSEPISVSWYKDG 8094
Query: 170 GPVTVNTSDFLVLDAQNYPW-LTNHTVQLQL----RSLAHNLSVVATNDVGVTSAS 220
P+ D+ N ++T L + RSLA S ATN +G S+S
Sbjct: 8095 KPLK---------DSPNVQTSFLDNTATLNIFKTDRSLAGQYSCTATNPIGSASSS 8141
Score = 30.0 bits (66), Expect = 3.4
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 40 RALRENERHAFTCRVAGGPGTPRLAWYLD-GQLQEASTSRLLSVGGEAFSGGTSTFTVTA 98
R ++++E + C++ G P ++ WY D ++QE+S R+ +F + +
Sbjct: 7315 RIVKQDEFTRYECKIGGSPEI-KVLWYKDETEIQESSKFRM------SFVDSVAVLEMHN 7367
Query: 99 HRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRAN 158
+ + + + + SA++S L V+ P + + +G V L ++
Sbjct: 7368 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPIFRKKPHPIETLKGAD--VHLECELQGT 7425
Query: 159 PPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTN-HTVQLQLRSLAHNLSVVATNDVG-- 215
PP +V+W +D + + ++ ++N+ LT+ H + + + ATNDVG
Sbjct: 7426 PPFHVSWY-KDKRELRSGKKYKIM-SENF--LTSIHILNVDAADIG-EYQCKATNDVGSD 7480
Query: 216 --VTSASLPAP 224
V S +L AP
Sbjct: 7481 TCVGSIALKAP 7491
Score = 29.3 bits (64), Expect = 5.8
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 44 ENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQH 103
E F ++G P P ++W+ DGQ+ ST + + +FS G + T+ A +
Sbjct: 19 EGSTATFEAHISGFP-VPEVSWFRDGQVISTSTLPGVQI---SFSDGRAKLTIPAVTKAN 74
Query: 104 ELNCSLQDPRSGRSANASVILNVQ 127
SL+ A ++ L V+
Sbjct: 75 SGRYSLKATNGSGQATSTAELLVK 98
>gi|10835203 advanced glycosylation end product-specific receptor
isoform 1 precursor [Homo sapiens]
Length = 404
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 142 AQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVL------DAQNYPWLTNHTV 195
A PG V L V A P + W+ P+ + S L+L D Y + H+
Sbjct: 248 AVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSS 307
Query: 196 QLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVVAAGLALGTLV 250
S A ++S++ + G T+ S+ GL + + +LG + A L +G ++
Sbjct: 308 HGPQESRAVSISIIEPGEEGPTAGSVGGSGLGTLALALGILGGLGTAALLIGVIL 362
>gi|13489095 sialoadhesin precursor [Homo sapiens]
Length = 1709
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 42 LRENERHAFTCRV-AGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHR 100
L+E + +C+V G P WY DGQ + STS L + T+T
Sbjct: 906 LQEGQAVVLSCQVHTGVPEGTSYRWYRDGQPLQESTSATLRF---------AAITLTQAG 956
Query: 101 AQHELNCSLQDPRSGRSANASVI-LNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANP 159
A H C Q P S ++ A+ I L+V + P V GPG L +L V ++P
Sbjct: 957 AYH---CQAQAPGSATTSLAAPISLHVSYAPR--HVTLTTLMDTGPGRLGLLLCRVDSDP 1011
Query: 160 PANVTWIDQD 169
PA + + D
Sbjct: 1012 PAQLRLLHGD 1021
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 40.0 bits (92), Expect = 0.003
Identities = 55/225 (24%), Positives = 84/225 (37%), Gaps = 29/225 (12%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQ-EASTSRLLSVGGEAFSGGTSTFTVTAHRAQHE--LNCS 108
C G P P++AW DG A+ R + V + F +T + +C+
Sbjct: 620 CAATGHPN-PQIAWQKDGGTDFPAARERRMHVMPD-----DDVFFITDVKIDDAGVYSCT 673
Query: 109 LQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQ 168
Q+ SANA+ L V P + V G V L NPP +TW
Sbjct: 674 AQNSAGSISANAT--LTVLETPSL--VVPLEDRVVSVGETVALQCKATGNPPPRITWFKG 729
Query: 169 DGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSAS-----LPA 223
D P+++ L D Q VQ + A + +N +G A LPA
Sbjct: 730 DRPLSLTERHHLTPDNQLL------VVQNVVAEDAGRYTCEMSNTLGTERAHSQLSVLPA 783
Query: 224 PGLLATRVEVPLLGIVVAAGLALGTLVGFSTLVACLVCRKEKKTK 268
G V + I V + + L +LV C++ + KK++
Sbjct: 784 AGCRKDGTTVGIFTIAVVSSIVLTSLVW-----VCIIYQTRKKSE 823
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 39.7 bits (91), Expect = 0.004
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEAST----SRLLSVGGEAFSGGTSTFTVT 97
LR R C GG P L WY D + S SR + +G SG T + +
Sbjct: 455 LRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRLPQESRRVHLGSVEKSGSTFSRELV 514
Query: 98 AHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRA 157
+ N + ++G+ +AS L VQF P + A + L + V +
Sbjct: 515 LVTGPSD-NQAKFTCKAGQ-LSASTQLAVQFPPTNVTILANASALRPGDALNLTCVSVSS 572
Query: 158 NPPANVTWIDQDG 170
NPP N++W D++G
Sbjct: 573 NPPVNLSW-DKEG 584
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 145 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 204
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 205 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 262
Query: 167 DQDGPV 172
PV
Sbjct: 263 KGGSPV 268
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 95 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 154
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 155 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 212
Query: 167 DQDGPV 172
PV
Sbjct: 213 KGGSPV 218
>gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens]
Length = 633
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 145 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 204
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 205 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 262
Query: 167 DQDGPV 172
PV
Sbjct: 263 KGGSPV 268
>gi|166295173 kin of IRRE like [Homo sapiens]
Length = 757
Score = 38.5 bits (88), Expect = 0.010
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 40 RALRENERHAFTCRVAGGPGTPRLAWYLDGQL-QEASTSRLLSVGGEAFSGGTSTFTVTA 98
+ ++E ER FTC+ P W G L ++A SR + +F FT
Sbjct: 232 QTVQEGERVVFTCQATANPEILGYRWAKGGFLIEDAHESRYETNVDYSF------FT--- 282
Query: 99 HRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRAN 158
++C + + S N S ++NV F P I V K G V L + N
Sbjct: 283 ----EPVSCEVHNKVG--STNVSTLVNVHFAPRIV-VDPK-PTTTDIGSDVTLTCVWVGN 334
Query: 159 PPANVTWIDQDGPVTVNTSDFLVL 182
PP +TW +D + ++ S+ L+L
Sbjct: 335 PPLTLTWTKKDSNMVLSNSNQLLL 358
Score = 28.9 bits (63), Expect = 7.6
Identities = 54/252 (21%), Positives = 82/252 (32%), Gaps = 27/252 (10%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQE--ASTSRLLSVGGEAFSGGTSTFTVTAH 99
L+ H TCR + W+ DG QE +++ LL G + T
Sbjct: 133 LQAGTPHNLTCRAFNAKPAATIIWFRDGTQQEGAVASTELLKDGKRETTVSQLLINPTDL 192
Query: 100 RAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANP 159
C + S+ L+V P + + + Q Q G VV ANP
Sbjct: 193 DIGRVFTCRSMNEAIPSGKETSIELDVHHPPTVT-LSIEPQTVQ-EGERVVFTCQATANP 250
Query: 160 P-ANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTS 218
W FL+ DA + TN + +S N VG T+
Sbjct: 251 EILGYRWA---------KGGFLIEDAHESRYETN----VDYSFFTEPVSCEVHNKVGSTN 297
Query: 219 ASLPAPGLLATRVEVPLLGIVVAAGLALGTLVGFSTLVACL-VCRKEKKTKGPSRHPSLI 277
S T V V +V T +G + C+ V + +++
Sbjct: 298 VS--------TLVNVHFAPRIVVDPKPTTTDIGSDVTLTCVWVGNPPLTLTWTKKDSNMV 349
Query: 278 SSDSNNLKLNNV 289
S+SN L L +V
Sbjct: 350 LSNSNQLLLKSV 361
>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.021
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 234 PLLGIVVAAGLALGTLVGFSTLVA------CLVCRKEKKTKGPSRHPSLI 277
P L AG+ LG+L+G + L C +CR KT +HPS +
Sbjct: 770 PTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCRFRGKTPEKKKHPSTL 819
>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.021
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 234 PLLGIVVAAGLALGTLVGFSTLVA------CLVCRKEKKTKGPSRHPSLI 277
P L AG+ LG+L+G + L C +CR KT +HPS +
Sbjct: 770 PTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCRFRGKTPEKKKHPSTL 819
>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
Length = 867
Score = 37.4 bits (85), Expect = 0.021
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 234 PLLGIVVAAGLALGTLVGFSTLVA------CLVCRKEKKTKGPSRHPSLI 277
P L AG+ LG+L+G + L C +CR KT +HPS +
Sbjct: 770 PTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCRFRGKTPEKKKHPSTL 819
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 37.0 bits (84), Expect = 0.028
Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 19/165 (11%)
Query: 165 WIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASL-PA 223
W D + +F D W + ++ ++ +L +N GV+S + P
Sbjct: 657 WELLDDGIPGTEGEFFAKDLSQDTWY-----EFRVLAVMQDLISEPSNIAGVSSTDIFPQ 711
Query: 224 PGLLATRVEVPLLGIVVAAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNN 283
P L + P+L +VA L + FSTL AC V ++ K+ + P L
Sbjct: 712 PDLTEDGLARPVLAGIVATICFLAAAILFSTLAACFVNKQRKRKLKRKKDPPL------- 764
Query: 284 LKLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRP 328
+ SL S L ++P+S A + + + +P
Sbjct: 765 ------SITHCRKSLESPLSSGKVSPESIRTLRAPSESSDDQGQP 803
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 36.6 bits (83), Expect = 0.037
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 320 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 378
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 379 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 425
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 426 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 457
Score = 32.0 bits (71), Expect = 0.90
Identities = 36/146 (24%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 2035 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 2093
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 2094 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 2145
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFL 180
VR +PP +V+W+ P+ ++ L
Sbjct: 2146 VRGSPPIHVSWLKDGLPLPLSQRTLL 2171
Score = 32.0 bits (71), Expect = 0.90
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 30/205 (14%)
Query: 55 AGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRS 114
A G P + W+ DGQ + +RL E S T V R C + P
Sbjct: 2328 AQGTPQPNITWHKDGQ----ALTRL-----ENNSRATRVLRV---RDAGLYTCLAESPAG 2375
Query: 115 GRSANASVILNVQFKPEI-AQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVT 173
+ S + VQ P I G ++ PG L VL V A P +TW +DG
Sbjct: 2376 --AIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQL-VLECSVEAEPAPKITW-HRDG--- 2428
Query: 174 VNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEV 233
+VL + LQL++ LS + D T+ + +A RVE+
Sbjct: 2429 ------IVLQEDAHTQFPERGRFLQLQA----LSTADSGDYSCTARNAAGSTSVAFRVEI 2478
Query: 234 PLLGIVVAAGLALGTLVGFSTLVAC 258
+ + + A+ V + L+ C
Sbjct: 2479 HTVPTIRSGPPAVNVSVNQTALLPC 2503
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 1478 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 1537
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 1538 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 1597
Query: 170 GPVT 173
P++
Sbjct: 1598 QPLS 1601
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 1954 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 2007
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 2008 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 2065
Query: 171 PV 172
P+
Sbjct: 2066 PL 2067
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 2237 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 2291
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 2292 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 2338
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 36.6 bits (83), Expect = 0.037
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 1511 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 1569
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 1570 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 1616
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 1617 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 1648
Score = 32.0 bits (71), Expect = 0.90
Identities = 36/146 (24%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 3226 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 3284
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 3285 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 3336
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFL 180
VR +PP +V+W+ P+ ++ L
Sbjct: 3337 VRGSPPIHVSWLKDGLPLPLSQRTLL 3362
Score = 32.0 bits (71), Expect = 0.90
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 30/205 (14%)
Query: 55 AGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRS 114
A G P + W+ DGQ + +RL E S T V R C + P
Sbjct: 3519 AQGTPQPNITWHKDGQ----ALTRL-----ENNSRATRVLRV---RDAGLYTCLAESPAG 3566
Query: 115 GRSANASVILNVQFKPEI-AQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVT 173
+ S + VQ P I G ++ PG L VL V A P +TW +DG
Sbjct: 3567 --AIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQL-VLECSVEAEPAPKITW-HRDG--- 3619
Query: 174 VNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEV 233
+VL + LQL++ LS + D T+ + +A RVE+
Sbjct: 3620 ------IVLQEDAHTQFPERGRFLQLQA----LSTADSGDYSCTARNAAGSTSVAFRVEI 3669
Query: 234 PLLGIVVAAGLALGTLVGFSTLVAC 258
+ + + A+ V + L+ C
Sbjct: 3670 HTVPTIRSGPPAVNVSVNQTALLPC 3694
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 2669 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 2728
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 2729 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 2788
Query: 170 GPVT 173
P++
Sbjct: 2789 QPLS 2792
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 3145 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 3198
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 3199 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 3256
Query: 171 PV 172
P+
Sbjct: 3257 PL 3258
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 3428 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 3482
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 3483 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 3529
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 36.6 bits (83), Expect = 0.037
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 229 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 287
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 288 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 334
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 335 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 366
Score = 32.0 bits (71), Expect = 0.90
Identities = 36/146 (24%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 1944 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 2002
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 2003 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 2054
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFL 180
VR +PP +V+W+ P+ ++ L
Sbjct: 2055 VRGSPPIHVSWLKDGLPLPLSQRTLL 2080
Score = 32.0 bits (71), Expect = 0.90
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 30/205 (14%)
Query: 55 AGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRS 114
A G P + W+ DGQ + +RL E S T V R C + P
Sbjct: 2237 AQGTPQPNITWHKDGQ----ALTRL-----ENNSRATRVLRV---RDAGLYTCLAESPAG 2284
Query: 115 GRSANASVILNVQFKPEI-AQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVT 173
+ S + VQ P I G ++ PG L VL V A P +TW +DG
Sbjct: 2285 --AIEKSFRVRVQAPPNIVGPRGPRFVVGLAPGQL-VLECSVEAEPAPKITW-HRDG--- 2337
Query: 174 VNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEV 233
+VL + LQL++ LS + D T+ + +A RVE+
Sbjct: 2338 ------IVLQEDAHTQFPERGRFLQLQA----LSTADSGDYSCTARNAAGSTSVAFRVEI 2387
Query: 234 PLLGIVVAAGLALGTLVGFSTLVAC 258
+ + + A+ V + L+ C
Sbjct: 2388 HTVPTIRSGPPAVNVSVNQTALLPC 2412
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 1387 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 1446
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 1447 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 1506
Query: 170 GPVT 173
P++
Sbjct: 1507 QPLS 1510
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 1863 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 1916
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 1917 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 1974
Query: 171 PV 172
P+
Sbjct: 1975 PL 1976
Score = 28.5 bits (62), Expect = 9.9
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 2146 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 2200
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 2201 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 2247
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 35.4 bits (80), Expect = 0.081
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 9/121 (7%)
Query: 107 CSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWI 166
C +Q+ S ++ VILNV + P+ + Y + PG+ + L +NPPA +W+
Sbjct: 393 CGIQNKLSVDHSDP-VILNVLYGPDDPTISPSYTYYR-PGVNLSLSCHAASNPPAQYSWL 450
Query: 167 DQDGPVTVNTSDFLVLD-AQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPG 225
DG + +T + + + + L +T Q + H+ + V T V SA LP P
Sbjct: 451 -IDGNIQQHTQELFISNITEKNSGL--YTCQANNSASGHSRTTVKTITV---SAELPKPS 504
Query: 226 L 226
+
Sbjct: 505 I 505
>gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isoform
a precursor [Homo sapiens]
Length = 839
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isoform
b precursor [Homo sapiens]
Length = 825
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isoform
c precursor [Homo sapiens]
Length = 612
Score = 35.0 bits (79), Expect = 0.11
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 34.7 bits (78), Expect = 0.14
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+ + + AFTC T W+++ Q S LS G T T
Sbjct: 157 VEDKDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNR-----TLTLLSVTRND 209
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
C +Q+P S ++ V LNV + P+ + PG + L +NPPA
Sbjct: 210 TGPYECEIQNPVSANRSDP-VTLNVTYGPDTPTISPS-DTYYRPGANLSLSCYAASNPPA 267
Query: 162 NVTWI 166
+W+
Sbjct: 268 QYSWL 272
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 34.7 bits (78), Expect = 0.14
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+ + + AFTC T W+++ Q S LS G T T
Sbjct: 157 VEDKDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNR-----TLTLLSVTRND 209
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
C +Q+P S ++ V LNV + P+ + PG + L +NPPA
Sbjct: 210 TGPYECEIQNPVSANRSDP-VTLNVTYGPDTPTISPS-DTYYRPGANLSLSCYAASNPPA 267
Query: 162 NVTWI 166
+W+
Sbjct: 268 QYSWL 272
>gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens]
Length = 585
Score = 33.9 bits (76), Expect = 0.24
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 251 GFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNL---KLNNVRLPRENMSLPSNLQLNDL 307
G T A L C KE++ + P + S ++ NL + R+ ++ +S PS L
Sbjct: 387 GEETPDAALTCLKERREQLPPQEDSKVTKQDKNLIKPLYDRYRIIKQILSTPS------L 440
Query: 308 TPDSRAVKPADRQMAQNNSRPELLDP 333
P + + +D Q + +P L DP
Sbjct: 441 IPTIQEEEDSDEDRPQGSQQPSLADP 466
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,320,986
Number of Sequences: 37866
Number of extensions: 690616
Number of successful extensions: 2358
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 2186
Number of HSP's gapped (non-prelim): 245
length of query: 366
length of database: 18,247,518
effective HSP length: 104
effective length of query: 262
effective length of database: 14,309,454
effective search space: 3749076948
effective search space used: 3749076948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.