Guide to the Human Genome
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Name: TMEM25 Sequence: fasta or formatted (351aa) NCBI GI: 221139838
Description:

transmembrane protein 25 isoform 4

Not currently referenced in the text

Other entries for this name:
alt prot {322aa} transmembrane protein 25 isoform 2
alt prot {218aa} transmembrane protein 25 isoform 3
alt prot {306aa} transmembrane protein 25 isoform 5
alt prot {322aa} transmembrane protein 25 isoform 2
alt prot {366aa} transmembrane protein 25 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         35           2
 C cysteine            1.1          4           1
 D aspartate           4.3         15           1
 E glutamate           4.3         15           1
 F phenylalanine       2.0          7           1
 G glycine             7.7         27           2
 H histidine           2.0          7           1
 I isoleucine          1.7          6           1
 K lysine              2.6          9           2
 L leucine            14.5         51           4
 M methionine          0.9          3           1
 N asparagine          6.0         21           2
 P proline             7.4         26           2
 Q glutamine           5.4         19           1
 R arginine            6.3         22           2
 S serine              7.7         27           2
 T threonine           6.3         22           1
 V valine              7.7         27           2
 W tryptophan          1.4          5           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 25 isoform 4 
TMEM25                0.976   transmembrane protein 25 isoform 1 
TMEM25                0.838   transmembrane protein 25 isoform 5 
TMEM25                0.823   transmembrane protein 25 isoform 2 
TMEM25                0.823   transmembrane protein 25 isoform 2 
TMEM25                0.441   transmembrane protein 25 isoform 3 
HMCN1                 0.033   hemicentin 1 
TTN                   0.025   titin isoform N2-A 
AGER                  0.024   advanced glycosylation end product-specific receptor...
SIGLEC1               0.024   sialoadhesin precursor 
LRIG1                 0.022   leucine-rich repeats and immunoglobulin-like domains...
NPHS1                 0.022   nephrin precursor 
KIRREL2               0.022   kin of IRRE-like 2 isoform c 
KIRREL2               0.022   kin of IRRE-like 2 isoform b 
KIRREL2               0.022   kin of IRRE-like 2 isoform a 
KIRREL                0.021   kin of IRRE like 
LOC147645             0.018   PREDICTED: hypothetical protein 
LOC147645             0.018   PREDICTED: hypothetical protein 
LOC147645             0.018   PREDICTED: hypothetical protein 
IGSF9B                0.018   immunoglobulin superfamily, member 9B 
HMCN2                 0.018   PREDICTED: hemicentin 2 
HMCN2                 0.018   PREDICTED: hemicentin 2 
HMCN2                 0.018   PREDICTED: hemicentin 2 
CEACAM5               0.015   carcinoembryonic antigen-related cell adhesion molec...
NTRK3                 0.015   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.015   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.015   neurotrophic tyrosine kinase, receptor, type 3 isofo...
CEACAM1               0.015   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.015   carcinoembryonic antigen-related cell adhesion molec...
FAM13C                0.013   hypothetical protein LOC220965 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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