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Search of human proteins with 31377591
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31377591 sestrin 3 [Homo sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31377591 sestrin 3 [Homo sapiens] 1003 0.0
gi|7657437 sestrin 1 [Homo sapiens] 613 e-175
gi|13899299 sestrin 2 [Homo sapiens] 518 e-147
gi|156142199 euchromatic histone-lysine N-methyltransferase 2 is... 37 0.031
gi|156142197 euchromatic histone-lysine N-methyltransferase 2 is... 37 0.031
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 36 0.091
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 36 0.091
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 36 0.091
gi|6631095 minichromosome maintenance complex component 3 [Homo ... 34 0.27
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 33 0.45
gi|131889097 cancer susceptibility candidate 1 isoform b [Homo s... 33 0.45
gi|131889447 cancer susceptibility candidate 1 isoform c [Homo s... 33 0.45
gi|131888105 cancer susceptibility candidate 1 isoform a [Homo s... 33 0.45
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 33 0.59
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 33 0.59
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] 33 0.59
gi|147903302 MAP7 domain containing 3 [Homo sapiens] 33 0.77
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 32 1.0
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 32 1.0
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 32 1.0
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 32 1.0
gi|18490978 intermediate filament family orphan isoform 2 [Homo ... 32 1.0
gi|89213250 intermediate filament family orphan isoform 4 [Homo ... 32 1.0
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 32 1.3
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 32 1.3
gi|82830424 gon-4-like isoform a [Homo sapiens] 32 1.3
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 32 1.3
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 32 1.3
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 32 1.3
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 32 1.3
>gi|31377591 sestrin 3 [Homo sapiens]
Length = 492
Score = 1003 bits (2592), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MNRGGGSPSAAANYLLCTNCRKVLRKDKRIRVSQPLTRGPSAFIPEKEVVQANTVDERTN 60
MNRGGGSPSAAANYLLCTNCRKVLRKDKRIRVSQPLTRGPSAFIPEKEVVQANTVDERTN
Sbjct: 1 MNRGGGSPSAAANYLLCTNCRKVLRKDKRIRVSQPLTRGPSAFIPEKEVVQANTVDERTN 60
Query: 61 FLVEEYSTSGRLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQ 120
FLVEEYSTSGRLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQ
Sbjct: 61 FLVEEYSTSGRLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQ 120
Query: 121 CSYLINMHVDEFLKTGGIAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKT 180
CSYLINMHVDEFLKTGGIAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKT
Sbjct: 121 CSYLINMHVDEFLKTGGIAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKT 180
Query: 181 GENNWSLPELVHAVVLLAHYHALASFVFGSGINPERDPEISNGFRLISVNNFCVCDLAND 240
GENNWSLPELVHAVVLLAHYHALASFVFGSGINPERDPEISNGFRLISVNNFCVCDLAND
Sbjct: 181 GENNWSLPELVHAVVLLAHYHALASFVFGSGINPERDPEISNGFRLISVNNFCVCDLAND 240
Query: 241 NNIENASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV 300
NNIENASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV
Sbjct: 241 NNIENASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV 300
Query: 301 VSGDTFHSFPHSDFEDDMIITSDVSRYIEDPGFGYEDFARRGEEHLPTFRAQDYTWENHG 360
VSGDTFHSFPHSDFEDDMIITSDVSRYIEDPGFGYEDFARRGEEHLPTFRAQDYTWENHG
Sbjct: 301 VSGDTFHSFPHSDFEDDMIITSDVSRYIEDPGFGYEDFARRGEEHLPTFRAQDYTWENHG 360
Query: 361 FSLVNRLYSDIGHLLDEKFRMVYNLTYNTMATHEDVDTTMLRRALFNYVHCMFGIRYDDY 420
FSLVNRLYSDIGHLLDEKFRMVYNLTYNTMATHEDVDTTMLRRALFNYVHCMFGIRYDDY
Sbjct: 361 FSLVNRLYSDIGHLLDEKFRMVYNLTYNTMATHEDVDTTMLRRALFNYVHCMFGIRYDDY 420
Query: 421 DYGEVNQLLERSLKVYIKTVTCYPERTTKRMYDSYWRQFKHSEKVHVNLLLMEARMQAEL 480
DYGEVNQLLERSLKVYIKTVTCYPERTTKRMYDSYWRQFKHSEKVHVNLLLMEARMQAEL
Sbjct: 421 DYGEVNQLLERSLKVYIKTVTCYPERTTKRMYDSYWRQFKHSEKVHVNLLLMEARMQAEL 480
Query: 481 LYALRAITRHLT 492
LYALRAITRHLT
Sbjct: 481 LYALRAITRHLT 492
>gi|7657437 sestrin 1 [Homo sapiens]
Length = 551
Score = 613 bits (1580), Expect = e-175
Identities = 297/466 (63%), Positives = 371/466 (79%), Gaps = 14/466 (3%)
Query: 30 IRVSQPLTRGPSAFIPEKEVVQANTVDERTNFL-VEEYSTSGRLDNITQVMSLHTQYLES 88
IR+ +PL +GPS FIPEKE++Q + D + + L + ++ GRLDNIT VM H QYLES
Sbjct: 97 IRIPRPLGQGPSRFIPEKEILQVGSEDAQMHALFADSFAALGRLDNITLVMVFHPQYLES 156
Query: 89 FLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQCSYLINMHVDEFLKTGGIAEWLNGLEYV 148
FL++Q Y+L+MDGPLPL YRHYI IMAAARHQCSYL+N+HV++FL GG +WLNGLE
Sbjct: 157 FLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENA 216
Query: 149 PQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAHYHALASFVF 208
PQ+L+NL E+NK+LAHRPWLITKEHI+ L+K E++WSL ELVHAVVLL HYH+LASF F
Sbjct: 217 PQKLQNLGELNKVLAHRPWLITKEHIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTF 276
Query: 209 GSGINPERDPEISNGFRLISVNNFCVCDLANDNNI--ENASLSGSNFGIVDSLSELEALM 266
G GI+PE + + FR SV+N+C+CD+ N N+ E S N + DS E+EALM
Sbjct: 277 GCGISPEIHCDGGHTFRPPSVSNYCICDITNGNHSVDEMPVNSAENVSVSDSFFEVEALM 336
Query: 267 ERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITSDVSR 326
E+M++LQE R++EEASQEEM++RFE EK+ES+FV S D ++++ VSR
Sbjct: 337 EKMRQLQECRDEEEASQEEMASRFEIEKRESMFVFSSD----------DEEVTPARAVSR 386
Query: 327 YIEDPGFGYEDFARRGEEHLPTFRAQDYTWENHGFSLVNRLYSDIGHLLDEKFRMVYNLT 386
+ ED +GY+DF+R G H+PTFR QDY WE+HG+SLVNRLY D+G L+DEKF + YNLT
Sbjct: 387 HFEDTSYGYKDFSRHGM-HVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLT 445
Query: 387 YNTMATHEDVDTTMLRRALFNYVHCMFGIRYDDYDYGEVNQLLERSLKVYIKTVTCYPER 446
YNTMA H+DVDT+MLRRA++NY+HCMFGIRYDDYDYGE+NQLL+RS KVYIKTV C PE+
Sbjct: 446 YNTMAMHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEK 505
Query: 447 TTKRMYDSYWRQFKHSEKVHVNLLLMEARMQAELLYALRAITRHLT 492
TKRMYDS+WRQFKHSEKVHVNLLL+EARMQAELLYALRAITR++T
Sbjct: 506 VTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYMT 551
>gi|13899299 sestrin 2 [Homo sapiens]
Length = 480
Score = 518 bits (1333), Expect = e-147
Identities = 265/457 (57%), Positives = 329/457 (71%), Gaps = 20/457 (4%)
Query: 38 RGPSAFIPEKEVVQANTVDERTNFLVEEYSTSGRLDNITQVMSLHTQYLESFLRSQFYML 97
RGPSAFIP +EV++ + +E +SGR+DN+ VM LH Y SF R + +L
Sbjct: 42 RGPSAFIPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLL 101
Query: 98 RMDGPLPLPYRHYIAIMAAARHQCSYLINMHVDEFLKTGGIAEWLNGLEYVPQRLKNLNE 157
DGPL +RHYIAIMAAARHQCSYL+ H+ EFL+TGG EWL GL P++L+ L+E
Sbjct: 102 HTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSE 161
Query: 158 INKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAHYHALASFVFGSGINPERD 217
INKLLAHRPWLITKEHIQ L+KTGE+ WSL EL+ A+VLL H H+L+SFVFG GI PE D
Sbjct: 162 INKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGD 221
Query: 218 PEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEALMERMKRLQEE-R 276
+ S + + ++ + + +N G +S ++EALMERM++LQE
Sbjct: 222 ADGSPAPQAPTP--------PSEQSSPPSRDPLNNSGGFESARDVEALMERMQQLQESLL 273
Query: 277 EDEEASQEEMSTRFEKEKKESLFVV-SGDTFHSFPHSDFEDDMIITSDVSRYIEDPGFGY 335
DE SQEEM +RFE EK ESL V S D PH D+ ++EDP FGY
Sbjct: 274 RDEGTSQEEMESRFELEKSESLLVTPSADILEPSPH----------PDMLCFVEDPTFGY 323
Query: 336 EDFARRGEEHLPTFRAQDYTWENHGFSLVNRLYSDIGHLLDEKFRMVYNLTYNTMATHED 395
EDF RRG + PTFRAQDYTWE+HG+SL+ RLY + G LLDEKF+ Y+LTYNT+A H
Sbjct: 324 EDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGGQLLDEKFQAAYSLTYNTIAMHSG 383
Query: 396 VDTTMLRRALFNYVHCMFGIRYDDYDYGEVNQLLERSLKVYIKTVTCYPERTTKRMYDSY 455
VDT++LRRA++NY+HC+FGIRYDDYDYGEVNQLLER+LKVYIKTV CYPE+TT+RMY+ +
Sbjct: 384 VDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERNLKVYIKTVACYPEKTTRRMYNLF 443
Query: 456 WRQFKHSEKVHVNLLLMEARMQAELLYALRAITRHLT 492
WR F+HSEKVHVNLLL+EARMQA LLYALRAITR++T
Sbjct: 444 WRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT 480
>gi|156142199 euchromatic histone-lysine N-methyltransferase 2
isoform b [Homo sapiens]
Length = 1176
Score = 37.4 bits (85), Expect = 0.031
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKE 296
DS SE+EAL E++ +EE E+EE +EE E+E+ E
Sbjct: 286 DSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDE 325
>gi|156142197 euchromatic histone-lysine N-methyltransferase 2
isoform a [Homo sapiens]
Length = 1210
Score = 37.4 bits (85), Expect = 0.031
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKE 296
DS SE+EAL E++ +EE E+EE +EE E+E+ E
Sbjct: 286 DSKSEVEALTEQLSEEEEEEEEEEEEEEEEEEEEEEEEDE 325
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 35.8 bits (81), Expect = 0.091
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 145 LEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAHY-HAL 203
L+Y +N E +LA R + K I + + WS E A LA+Y H
Sbjct: 339 LKYTVPGYRNSLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWS--EWTGAS--LAYYCHPP 394
Query: 204 ASFVFGSGINPERDPEISNGFRL--ISVNNFCVCDLANDNNIENASL---SGSNFGIVDS 258
S+ N ++ +GF L + NN ++ N+ L SG GI++
Sbjct: 395 TSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEE 454
Query: 259 LSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLF 299
E L +R +R QEERED++ S +E E +F
Sbjct: 455 KDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMF 495
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 35.8 bits (81), Expect = 0.091
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 145 LEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAHY-HAL 203
L+Y +N E +LA R + K I + + WS E A LA+Y H
Sbjct: 339 LKYTVPGYRNSLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWS--EWTGAS--LAYYCHPP 394
Query: 204 ASFVFGSGINPERDPEISNGFRL--ISVNNFCVCDLANDNNIENASL---SGSNFGIVDS 258
S+ N ++ +GF L + NN ++ N+ L SG GI++
Sbjct: 395 TSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEE 454
Query: 259 LSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLF 299
E L +R +R QEERED++ S +E E +F
Sbjct: 455 KDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMF 495
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 35.8 bits (81), Expect = 0.091
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 145 LEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAHY-HAL 203
L+Y +N E +LA R + K I + + WS E A LA+Y H
Sbjct: 351 LKYTVPGYRNSLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWS--EWTGAS--LAYYCHPP 406
Query: 204 ASFVFGSGINPERDPEISNGFRL--ISVNNFCVCDLANDNNIENASL---SGSNFGIVDS 258
S+ N ++ +GF L + NN ++ N+ L SG GI++
Sbjct: 407 TSWTPPPYFNESIVVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEE 466
Query: 259 LSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLF 299
E L +R +R QEERED++ S +E E +F
Sbjct: 467 KDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMF 507
>gi|6631095 minichromosome maintenance complex component 3 [Homo
sapiens]
Length = 808
Score = 34.3 bits (77), Expect = 0.27
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 262 LEALMERMKRLQEERE---DEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDM 318
LE +R KR ++E E +EE SQE+ + ++ K GD++ + SD E++M
Sbjct: 658 LEKEKKRKKRSEDESETEDEEEKSQEDQEQKRKRRKTRQPDAKDGDSYDPYDFSDTEEEM 717
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 33.5 bits (75), Expect = 0.45
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 215 ERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEALMERMKRLQE 274
+ D + ++ + + +L D+N ENA G N + E + L E
Sbjct: 1415 DEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDN--------DFSPSDEELANLLE 1466
Query: 275 EREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIIT 321
E ED E + + E + ++ GDT S +SD EDD+I++
Sbjct: 1467 EGEDGEDE--------DSDADEEVELILGDT-DSSDNSDLEDDIILS 1504
>gi|131889097 cancer susceptibility candidate 1 isoform b [Homo
sapiens]
Length = 716
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 267 ERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV--VSGDTFHSFPHSDFE 315
ER+K LQEE E +EE ++EKE+ E L + + + +H D E
Sbjct: 13 ERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLE 63
>gi|131889447 cancer susceptibility candidate 1 isoform c [Homo
sapiens]
Length = 690
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 267 ERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV--VSGDTFHSFPHSDFE 315
ER+K LQEE E +EE ++EKE+ E L + + + +H D E
Sbjct: 77 ERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLE 127
>gi|131888105 cancer susceptibility candidate 1 isoform a [Homo
sapiens]
Length = 722
Score = 33.5 bits (75), Expect = 0.45
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 267 ERMKRLQEEREDEEASQEEMSTRFEKEKKESLFV--VSGDTFHSFPHSDFE 315
ER+K LQEE E +EE ++EKE+ E L + + + +H D E
Sbjct: 19 ERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLE 69
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 33.1 bits (74), Expect = 0.59
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 259 LSELEALMERMKRLQEEREDEEASQEEMSTRFE----KEKKESLF----VVSGDTFHSFP 310
LSE+EA +E +++ +EER+D+ +EE FE E + LF + SG + +
Sbjct: 207 LSEMEAYLENIEK-EEERKDDNDEEEEDIDFFEDIDSDEDEGGLFGSKKLKSGKSSRNLK 265
Query: 311 HSDFEDDMIITSDVSRYIED 330
+ DF D + D++ +D
Sbjct: 266 YKDFFDPVESDEDITNVHDD 285
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 33.1 bits (74), Expect = 0.59
Identities = 25/84 (29%), Positives = 36/84 (42%)
Query: 240 DNNIENASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLF 299
+ + + SGSN DS E E E + QE+ E EE +++ E E E
Sbjct: 2413 EEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYP 2472
Query: 300 VVSGDTFHSFPHSDFEDDMIITSD 323
++ F D EDD+II D
Sbjct: 2473 DMNASPLVRFERFDREDDLIIEFD 2496
>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
Length = 2229
Score = 33.1 bits (74), Expect = 0.59
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 265 LMERMKRLQEEREDEEASQE--EMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
+++ +K +E+E E+ QE E STR KEK++S + D E+D + +
Sbjct: 946 VLKALKVEDKEKELEKIKQELGEESTRLAKEKEQSPTAEKDE--------DEENDASLAN 997
Query: 323 DVSRYIEDPGFGYEDFARRG----EEHLPTFRAQDYTWE 357
+ +ED G G+ F R EE P D WE
Sbjct: 998 SSTTTLEDKGPGHATFGREATKFEEEEKP-----DKAWE 1031
>gi|147903302 MAP7 domain containing 3 [Homo sapiens]
Length = 876
Score = 32.7 bits (73), Expect = 0.77
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 237 LANDNNIENASLSGSNFGIVDSLSELEALME--RMKRLQEEREDEEASQEEMSTRFEKEK 294
L+ + I S + S GI+++ + + L E R+ R Q E+E+EE +EEM R K+
Sbjct: 575 LSQRHMIYEESGNKSTAGIMNAEAATKILTELRRLAREQREKEEEERQREEMQQRVIKKS 634
Query: 295 KE 296
K+
Sbjct: 635 KD 636
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 32.3 bits (72), Expect = 1.0
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 246 ASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKES 297
+SLSG N + D LEA R+ +L+EE E+E+ + E MS R K +++
Sbjct: 1719 SSLSGRN-ALQDEKRRLEA---RIAQLEEELEEEQGNMEAMSDRVRKATQQA 1766
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 245 NASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKK 295
N LS S + D S +EAL E KR Q+E E+ EE + ++K +K
Sbjct: 1370 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEK 1420
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 32.3 bits (72), Expect = 1.0
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 246 ASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKES 297
+SLSG N + D LEA R+ +L+EE E+E+ + E MS R K +++
Sbjct: 1726 SSLSGRN-ALQDEKRRLEA---RIAQLEEELEEEQGNMEAMSDRVRKATQQA 1773
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 245 NASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKK 295
N LS S + D S +EAL E KR Q+E E+ EE + ++K +K
Sbjct: 1377 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEK 1427
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 32.3 bits (72), Expect = 1.0
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 246 ASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKES 297
+SLSG N + D LEA R+ +L+EE E+E+ + E MS R K +++
Sbjct: 1726 SSLSGRN-ALQDEKRRLEA---RIAQLEEELEEEQGNMEAMSDRVRKATQQA 1773
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 245 NASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKK 295
N LS S + D S +EAL E KR Q+E E+ EE + ++K +K
Sbjct: 1377 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEK 1427
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 32.3 bits (72), Expect = 1.0
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 246 ASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKES 297
+SLSG N + D LEA R+ +L+EE E+E+ + E MS R K +++
Sbjct: 1719 SSLSGRN-ALQDEKRRLEA---RIAQLEEELEEEQGNMEAMSDRVRKATQQA 1766
Score = 32.0 bits (71), Expect = 1.3
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 245 NASLSGSNFGIVDSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKK 295
N LS S + D S +EAL E KR Q+E E+ EE + ++K +K
Sbjct: 1370 NIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEK 1420
>gi|18490978 intermediate filament family orphan isoform 2 [Homo
sapiens]
Length = 559
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 265 LMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDF---EDDMIIT 321
L +R+ LQEE ++ +A QEE++ + E+ K E L V G ++ D E M +
Sbjct: 269 LQDRVNELQEEAQEADACQEELALKVEQLKAE-LVVFKGLMSNNLSELDTKIQEKAMKVD 327
Query: 322 SDVSRYIE 329
D+ R I+
Sbjct: 328 MDICRRID 335
>gi|89213250 intermediate filament family orphan isoform 4 [Homo
sapiens]
Length = 563
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 265 LMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDF---EDDMIIT 321
L +R+ LQEE ++ +A QEE++ + E+ K E L V G ++ D E M +
Sbjct: 269 LQDRVNELQEEAQEADACQEELALKVEQLKAE-LVVFKGLMSNNLSELDTKIQEKAMKVD 327
Query: 322 SDVSRYIE 329
D+ R I+
Sbjct: 328 MDICRRID 335
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 231 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 288
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 289 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 348
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 349 E-SRFDRDSGESEEAEEEVGE 368
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 154 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 212
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 241 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 298
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 299 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 358
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 359 E-SRFDRDSGESEEAEEEVGE 378
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 164 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 222
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 32.0 bits (71), Expect = 1.3
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 236 DLANDNNIENASLSGSNFGIVDSLSELEALMERMKRLQEERE-------DEEASQEEMST 288
DL D E +S S + V S+ EL+ ME++ L ER +EE SQEE S
Sbjct: 1467 DLTQDEEDEMSSASEES---VLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSE 1523
Query: 289 RFEKEKKES 297
E+E++E+
Sbjct: 1524 PEEEEEEEA 1532
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 232 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 289
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 290 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 349
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 350 E-SRFDRDSGESEEAEEEVGE 369
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 155 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 213
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 241 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 298
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 299 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 358
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 359 E-SRFDRDSGESEEAEEEVGE 378
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 164 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 222
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 209 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 266
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 267 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 326
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 327 E-SRFDRDSGESEEAEEEVGE 346
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 132 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 190
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 32.0 bits (71), Expect = 1.3
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 6/141 (4%)
Query: 206 FVFGSGINPERDPEISNGFRLISVNNFCVCDLANDNNIENASLSGSNFGIVDSLSELEAL 265
F G G P ++ ++ L + + + D + +S + S G + E E
Sbjct: 198 FELGDGRKPVKEEKMEERDLLSDLQD--ISDSERKTSSAESSSAESGSGSEEEEEEEEEE 255
Query: 266 MER---MKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFEDDMIITS 322
E + +EE E+EE +EE + E+ ++S VS + + E+ +++
Sbjct: 256 EEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVP 315
Query: 323 DVSRYIEDPGFGYEDFARRGE 343
+ SR+ D G E GE
Sbjct: 316 E-SRFDRDSGESEEAEEEVGE 335
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 257 DSLSELEALMERMKRLQEEREDEEASQEEMSTRFEKEKKESLFVVSGDTFHSFPHSDFED 316
D L +LE ER ++++E+++ E+ Q+E R E+ +KE H D+ D
Sbjct: 121 DRLEQLERKRERERKMREQQK-EQREQKERERRAEERRKEREARREVSAHHRTMREDYSD 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,203,670
Number of Sequences: 37866
Number of extensions: 806604
Number of successful extensions: 5630
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 5295
Number of HSP's gapped (non-prelim): 291
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.