Guide to the Human Genome
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Name: SESN1 Sequence: fasta or formatted (551aa) NCBI GI: 7657437
Description:

sestrin 1

Referenced in:

Oxygen Sensing and Hemoglobin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         30           3
 C cysteine            2.0         11           1
 D aspartate           5.6         31           2
 E glutamate           8.5         47           3
 F phenylalanine       4.4         24           2
 G glycine             4.9         27           2
 H histidine           5.1         28           1
 I isoleucine          4.9         27           1
 K lysine              4.5         25           1
 L leucine            10.3         57           3
 M methionine          3.4         19           1
 N asparagine          4.0         22           1
 P proline             3.8         21           2
 Q glutamine           3.4         19           1
 R arginine            6.4         35           2
 S serine              7.3         40           2
 T threonine           4.5         25           2
 V valine              6.0         33           2
 W tryptophan          1.3          7           1
 Y tyrosine            4.2         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sestrin 1 
SESN3                 0.531   sestrin 3 
SESN2                 0.454   sestrin 2 
PDE9A                 0.014   phosphodiesterase 9A isoform l 
PDE9A                 0.013   phosphodiesterase 9A isoform o 
PDE9A                 0.013   phosphodiesterase 9A isoform n 
PDE9A                 0.013   phosphodiesterase 9A isoform m 
PDE9A                 0.013   phosphodiesterase 9A isoform k 
PDE9A                 0.013   phosphodiesterase 9A isoform i 
PDE9A                 0.013   phosphodiesterase 9A isoform h 
PDE9A                 0.013   phosphodiesterase 9A isoform f 
PDE9A                 0.013   phosphodiesterase 9A isoform e 
PDE9A                 0.013   phosphodiesterase 9A isoform d 
PDE9A                 0.013   phosphodiesterase 9A isoform c 
PDE9A                 0.013   phosphodiesterase 9A isoform b 
PDE9A                 0.013   phosphodiesterase 9A isoform a 
EHMT2                 0.006   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.006   euchromatic histone-lysine N-methyltransferase 2 is...
BAZ1B                 0.006   bromodomain adjacent to zinc finger domain, 1B [Homo...
USP8                  0.006   ubiquitin specific peptidase 8 
USP8                  0.006   ubiquitin specific peptidase 8 
USP8                  0.006   ubiquitin specific peptidase 8 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform b 
MAP1S                 0.005   BPY2 interacting protein 1 
GON4L                 0.005   gon-4-like isoform a 
METTL14               0.005   methyltransferase like 14 
SF3B2                 0.005   splicing factor 3B subunit 2 
SLC9A3R1              0.005   sodium/hydrogen exchanger regulatory factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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