CASC1 3061

Name: CASC1	Sequence: fasta or formatted (716aa)		NCBI GI: 131889097
Description: cancer susceptibility candidate 1 isoform b		Not currently referenced in the text
Other entries for this name: alt prot {722aa} cancer susceptibility candidate 1 isoform a alt prot {690aa} cancer susceptibility candidate 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 33 2 C cysteine 1.5 11 1 D aspartate 3.6 26 2 E glutamate 14.0 100 4 F phenylalanine 3.9 28 2 G glycine 2.5 18 2 H histidine 2.8 20 1 I isoleucine 5.9 42 2 K lysine 8.9 64 4 L leucine 11.0 79 3 M methionine 2.1 15 1 N asparagine 3.8 27 2 P proline 3.8 27 2 Q glutamine 3.9 28 2 R arginine 3.9 28 2 S serine 7.0 50 2 T threonine 5.6 40 2 V valine 7.3 52 3 W tryptophan 1.7 12 1 Y tyrosine 2.2 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cancer susceptibility candidate 1 isoform b CASC1 0.999 cancer susceptibility candidate 1 isoform a CASC1 0.869 cancer susceptibility candidate 1 isoform c GCC2 0.021 GRIP and coiled-coil domain-containing 2 LOC727832 0.021 golgi autoantigen, golgin subfamily a-like LOC283685 0.019 PREDICTED: golgi autoantigen, golgin subfamily a-li... EIF5B 0.019 eukaryotic translation initiation factor 5B CALD1 0.019 caldesmon 1 isoform 1 ENAH 0.018 enabled homolog isoform a ENAH 0.018 enabled homolog isoform b FHAD1 0.018 forkhead-associated (FHA) phosphopeptide binding do... HAP1 0.017 huntingtin-associated protein 1 isoform 2 CSPP1 0.016 centrosome spindle pole associated protein 1 isofor... CSPP1 0.016 centrosome spindle pole associated protein 1 isofor... LOC100133220 0.016 PREDICTED: hypothetical protein ITSN1 0.016 intersectin 1 isoform ITSN-s ITSN1 0.016 intersectin 1 isoform ITSN-l AKAP9 0.016 A-kinase anchor protein 9 isoform 2 CLIP1 0.016 restin isoform b CLIP1 0.016 restin isoform a CCDC18 0.016 sarcoma antigen NY-SAR-41 INCENP 0.016 inner centromere protein antigens 135/155kDa isofor... INCENP 0.016 inner centromere protein antigens 135/155kDa isofor... MYO10 0.016 myosin X DCTN1 0.015 dynactin 1 isoform 4 DCTN1 0.015 dynactin 1 isoform 3 DCTN1 0.015 dynactin 1 isoform 2 DCTN1 0.015 dynactin 1 isoform 1 MYO6 0.015 myosin VI PPL 0.015 periplakin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.