Guide to the Human Genome
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Name: FLJ37396 Sequence: fasta or formatted (1151aa) NCBI GI: 169169865
Description:

PREDICTED: hypothetical protein LOC285754

Not currently referenced in the text

Other entries for this name:
alt prot {1151aa} PREDICTED: hypothetical protein LOC285754
alt prot {1151aa} PREDICTED: hypothetical protein LOC285754
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         78           2
 C cysteine            1.9         22           2
 D aspartate           4.5         52           3
 E glutamate           7.6         88           2
 F phenylalanine       3.9         45           2
 G glycine             4.1         47           2
 H histidine           3.2         37           2
 I isoleucine          4.1         47           1
 K lysine              5.5         63           2
 L leucine            14.2        163           4
 M methionine          2.3         27           1
 N asparagine          3.2         37           2
 P proline             4.5         52           3
 Q glutamine           7.1         82           3
 R arginine            4.8         55           3
 S serine              7.1         82           2
 T threonine           4.7         54           1
 V valine              5.4         62           2
 W tryptophan          1.3         15           1
 Y tyrosine            3.7         43           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC285754 
FLJ37396              0.996   PREDICTED: hypothetical protein LOC285754 
FLJ37396              0.993   PREDICTED: hypothetical protein LOC285754 
GOLGA4                0.006   golgi autoantigen, golgin subfamily a, 4 
ZNF853                0.005   zinc finger protein 853 
PCNT                  0.004   pericentrin 
SMC2                  0.004   structural maintenance of chromosomes 2 
SMC2                  0.004   structural maintenance of chromosomes 2 
SMC2                  0.004   structural maintenance of chromosomes 2 
WDR87                 0.004   NYD-SP11 protein 
KIF3A                 0.004   kinesin family member 3A 
CCDC147               0.004   coiled-coil domain containing 147 
SYCP1                 0.004   synaptonemal complex protein 1 
EXOC3                 0.004   Sec6 protein 
FGA                   0.003   fibrinogen, alpha polypeptide isoform alpha prepropr...
FGA                   0.003   fibrinogen, alpha polypeptide isoform alpha-E preprop...
GCOM1                 0.003   GRINL1A combined protein isoform 8 
AKAP9                 0.003   A-kinase anchor protein 9 isoform 3 
CCDC27                0.003   coiled-coil domain containing 27 
CCDC30                0.003   coiled-coil domain containing 30 
AKAP9                 0.003   A-kinase anchor protein 9 isoform 2 
KIF11                 0.003   kinesin family member 11 
MYH7B                 0.003   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
PIBF1                 0.003   progesterone-induced blocking factor 1 
ITSN1                 0.003   intersectin 1 isoform ITSN-s 
ITSN1                 0.003   intersectin 1 isoform ITSN-l 
CGN                   0.003   cingulin 
CEP120                0.003   coiled-coil domain containing 100 
DHX37                 0.003   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
ITSN2                 0.003   intersectin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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