Guide to the Human Genome
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Name: KAAG1 Sequence: fasta or formatted (84aa) NCBI GI: 31044434
Description:

kidney associated antigen 1

Referenced in:

Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.5         13           4
 C cysteine            0.0          0           0
 D aspartate           4.8          4           3
 E glutamate           6.0          5           1
 F phenylalanine       0.0          0           0
 G glycine             7.1          6           1
 H histidine           6.0          5           1
 I isoleucine          0.0          0           0
 K lysine              4.8          4           1
 L leucine             7.1          6           1
 M methionine          1.2          1           1
 N asparagine          2.4          2           1
 P proline            15.5         13           3
 Q glutamine           6.0          5           1
 R arginine            8.3          7           2
 S serine              3.6          3           1
 T threonine           3.6          3           1
 V valine              7.1          6           1
 W tryptophan          1.2          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kidney associated antigen 1 
CASKIN1               0.085   CASK interacting protein 1 
LOC100127930          0.072   PREDICTED: hypothetical protein 
LOC100127930          0.072   PREDICTED: hypothetical protein 
LOC100127930          0.072   PREDICTED: hypothetical protein 
NDUFV3                0.052   NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...
GLCCI1                0.052   glucocorticoid induced transcript 1 
C11orf35              0.039   hypothetical protein LOC256329 
NACC1                 0.033   transcriptional repressor NAC1 
SYN1                  0.033   synapsin I isoform Ia 
SYN1                  0.033   synapsin I isoform Ib 
LOC100293036          0.033   PREDICTED: hypothetical protein 
LOC100292916          0.033   PREDICTED: hypothetical protein 
LOC100289065          0.033   PREDICTED: hypothetical protein 
LOC100290781          0.033   PREDICTED: hypothetical protein XP_002347101 
LOC100289065          0.033   PREDICTED: hypothetical protein XP_002343789 
LOC100289368          0.033   PREDICTED: hypothetical protein XP_002343360 
LOC100286938          0.033   PREDICTED: hypothetical protein XP_002342984 
PELP1                 0.033   proline, glutamic acid and leucine rich protein 1 [...
IP6K3                 0.033   inositol hexakisphosphate kinase 3 
IP6K3                 0.033   inositol hexakisphosphate kinase 3 
SPEG                  0.033   SPEG complex locus 
SYNJ1                 0.026   synaptojanin 1 isoform c 
HS3ST4                0.026   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
UAP1L1                0.026   UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 ...
C9orf66               0.026   hypothetical protein LOC157983 
LOC100292927          0.026   PREDICTED: hypothetical protein 
LOC100128074          0.026   PREDICTED: hypothetical protein 
LOC100289003          0.026   PREDICTED: hypothetical protein XP_002342618 
FLJ22184              0.020   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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