Guide to the Human Genome
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Name: NACC1 Sequence: fasta or formatted (527aa) NCBI GI: 16418383
Description:

transcriptional repressor NAC1

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         53           3
 C cysteine            2.3         12           1
 D aspartate           4.0         21           2
 E glutamate           7.6         40           3
 F phenylalanine       3.2         17           2
 G glycine             7.4         39           4
 H histidine           2.1         11           1
 I isoleucine          2.7         14           1
 K lysine              4.0         21           1
 L leucine             6.8         36           2
 M methionine          3.4         18           2
 N asparagine          4.4         23           2
 P proline             6.5         34           4
 Q glutamine           6.1         32           2
 R arginine            5.3         28           2
 S serine              9.3         49           3
 T threonine           4.9         26           2
 V valine              6.8         36           3
 W tryptophan          0.6          3           1
 Y tyrosine            2.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcriptional repressor NAC1 
NACC2                 0.452   BTB (POZ) domain containing 14A 
ZBTB37                0.089   zinc finger and BTB domain containing 37 isoform a ...
ZBTB37                0.089   zinc finger and BTB domain containing 37 isoform b [...
ZBTB34                0.084   zinc finger and BTB domain containing 34 
ZBTB43                0.073   zinc finger and BTB domain containing 43 
ZBTB43                0.073   zinc finger and BTB domain containing 43 
ZBTB22                0.071   zinc finger and BTB domain containing 22 
ZBTB22                0.071   zinc finger and BTB domain containing 22 
ZBTB9                 0.070   zinc finger and BTB domain containing 9 
ZBTB17                0.062   zinc finger and BTB domain containing 17 
ZBTB20                0.058   zinc finger and BTB domain containing 20 
ZBTB8A                0.055   zinc finger and BTB domain containing 8A 
ZBTB45                0.054   zinc finger and BTB domain containing 45 
ZBTB46                0.053   zinc finger and BTB domain containing 46 
ZNF509                0.051   zinc finger protein 509 
ZFP161                0.049   zinc finger protein 161 homolog 
ZFP161                0.049   zinc finger protein 161 homolog 
ZBTB7C                0.049   zinc finger and BTB domain containing 7C 
ZBTB39                0.047   zinc finger and BTB domain containing 39 
ZBTB26                0.046   zinc finger and BTB domain containing 26 
ZBTB11                0.045   zinc finger protein ZNF-U69274 
ZBTB7B                0.045   zinc finger and BTB domain containing 7B 
LOC100293130          0.045   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.045   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.045   PREDICTED: similar to kruppel-related zinc finger p...
ZBTB16                0.045   promyelocytic leukemia zinc finger protein 
ZBTB16                0.045   promyelocytic leukemia zinc finger protein 
ZBTB8B                0.045   zinc finger and BTB domain containing 8B 
ZBTB10                0.045   zinc finger and BTB domain containing 10 isoform b ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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