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Search of human proteins with 30911103
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30911103 pygopus homolog 1 [Homo sapiens]
(419 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30911103 pygopus homolog 1 [Homo sapiens] 897 0.0
gi|23510333 pygopus homolog 2 [Homo sapiens] 240 2e-63
gi|31543543 retinoic acid induced 17 [Homo sapiens] 44 4e-04
gi|20162566 chromosome 7 open reading frame 11 [Homo sapiens] 43 5e-04
gi|241982780 programmed cell death 6 interacting protein isoform... 43 6e-04
gi|22027538 programmed cell death 6 interacting protein isoform ... 43 6e-04
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 42 8e-04
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 42 0.001
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 42 0.001
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 41 0.002
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 41 0.002
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 41 0.002
gi|38373671 SEC24-related protein C [Homo sapiens] 41 0.002
gi|38373669 SEC24-related protein C [Homo sapiens] 41 0.002
gi|11415052 retinoid X receptor, beta [Homo sapiens] 40 0.003
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 40 0.003
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 40 0.003
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 40 0.003
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 40 0.003
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 40 0.004
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 40 0.004
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 40 0.004
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 40 0.004
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 40 0.004
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 40 0.004
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.004
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.004
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 40 0.004
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 40 0.004
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 40 0.004
>gi|30911103 pygopus homolog 1 [Homo sapiens]
Length = 419
Score = 897 bits (2318), Expect = 0.0
Identities = 419/419 (100%), Positives = 419/419 (100%)
Query: 1 MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN 60
MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN
Sbjct: 1 MPAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN 60
Query: 61 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG 120
PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG
Sbjct: 61 PNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG 120
Query: 121 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP 180
PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP
Sbjct: 121 PYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNP 180
Query: 181 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD 240
AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD
Sbjct: 181 AENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD 240
Query: 241 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA 300
FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA
Sbjct: 241 FTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPA 300
Query: 301 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE 360
NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE
Sbjct: 301 NGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCE 360
Query: 361 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA 419
ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA
Sbjct: 361 ASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADKDVQLMRTRETFGPSAVGSDA 419
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 240 bits (613), Expect = 2e-63
Identities = 161/439 (36%), Positives = 214/439 (48%), Gaps = 58/439 (13%)
Query: 3 AENSPAPAYKVSSHGGDSGLDG-------LGGPGVQLGSPDKKKRKANTQGPSFPPLSEY 55
A ++P P K+ GG + G G+Q+ SP+KK+RK+NTQGP++ L+E+
Sbjct: 2 AASAPPPPDKLEGGGGPAPPPAPPSTGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLTEF 61
Query: 56 APPPNPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFR-MPPHVPPRM 114
APPP P DHLVA+NPF+D++ + K ++ P+LG P FGG+ M VPP
Sbjct: 62 APPPTPMVDHLVASNPFEDDFG--APKVGVAAPPFLGSPVP-FGGFRVQGGMAGQVPPGY 118
Query: 115 SSPYCG-PYSLRNQPHPFPQNPLGMGFNRP-HAFNFGPHDNSSFGNPSYNNALSQNVNMP 172
S+ G P LR QP PFP NP+G FN P + P N +F + +N L QN + P
Sbjct: 119 STGGGGGPQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNFSPP 178
Query: 173 NQHFRQNPAENFSQI-------PPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIP- 224
+ P F + PP+ +++ P L+ F SPL+ +P
Sbjct: 179 SGQMMPGPVGGFGPMISPTMGQPPR--AELGPPSLSQRFAQPGAPFGPSPLQRPGQGLPS 236
Query: 225 -PPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVN 283
PPNT +P P D + +PP + A
Sbjct: 237 LPPNT-----SPFPGPDPGFPGPGGEDGGKPLNPP-------------------ASTAFP 272
Query: 284 QENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDP---- 339
QE S A N N + N + G DA + K+ G S P
Sbjct: 273 QEPHSGSPAAAVNGNQPSFPPNSSGRGGGTPDANSLAPPGKAG------GGSGPQPPPGL 326
Query: 340 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMADK 399
VYPCG C +EVNDDQDAILCEASCQKWFHR CTGMTE+AYGLLT EASAVW CD C+ K
Sbjct: 327 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 386
Query: 400 DVQLMRTRETFGPSAVGSD 418
++Q + RE G +D
Sbjct: 387 EIQSVYIREGMGQLVAAND 405
>gi|31543543 retinoic acid induced 17 [Homo sapiens]
Length = 1067
Score = 43.5 bits (101), Expect = 4e-04
Identities = 55/215 (25%), Positives = 81/215 (37%), Gaps = 31/215 (14%)
Query: 24 GLGGPGVQLGSPDKKKRKA-NTQGPSFPPLSEYAPPPNPNS---DHLVAANPFDDNYNTI 79
G+ GP + + P T G P + P P P S ++ P + NY
Sbjct: 359 GMSGPPMGMNQPRPPGISPFGTHGQRMP--QQTYPGPRPQSLPIQNIKRPYPGEPNYGNQ 416
Query: 80 SYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHP--FPQNPLG 137
Y P S P YP P+ P ++SP + +QP +P +
Sbjct: 417 QYGP-NSQFPTQPGQYPA----------PNPPRPLTSPNYPGQRMPSQPSSGQYPPPTVN 465
Query: 138 MG-FNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIP-PQNASQV 195
MG + +P FN N++F SY+N NVN P R P N+ P P N +
Sbjct: 466 MGQYYKPEQFN---GQNNTFSGSSYSNYSQGNVNRPP---RPVPVANYPHSPVPGNPTPP 519
Query: 196 SNP--DLASNFVPGNNSN--FTSPLESNHSFIPPP 226
P + P + F ++ N S +PPP
Sbjct: 520 MTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPP 554
>gi|20162566 chromosome 7 open reading frame 11 [Homo sapiens]
Length = 179
Score = 43.1 bits (100), Expect = 5e-04
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 85 PSSNPYLGPGYPGFGGYSTFR-MPPHVPPRMSSPYCGPYSLRNQPHPFPQN-PLGMGFNR 142
P + PY GPG G+G S+FR P PR SP G S + P P++ P G +
Sbjct: 8 PPTPPYPGPGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGSPHHTPPYGPRSRPYGSSHSP 67
Query: 143 PHAFNFGPHDNSSFGNPS---YNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNP 198
H G FG+PS Y + S++ Q F +P + Q PQ + + S P
Sbjct: 68 RHG---GSFPGGRFGSPSPGGYPGSYSRSPAGSQQQFGYSPGQ--QQTHPQGSPRTSTP 121
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 42.7 bits (99), Expect = 6e-04
Identities = 43/148 (29%), Positives = 53/148 (35%), Gaps = 21/148 (14%)
Query: 3 AENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPP-LSEYAPPPNP 61
A + P PAY+ S GG + P P K + A P P + A P+P
Sbjct: 724 APSIPTPAYQSSPAGGHAPTPPTPAPRTM--PPTKPQPPARPPPPVLPANRAPSATAPSP 781
Query: 62 NSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMP-------------P 108
A P T P P + P YPG+ GY MP P
Sbjct: 782 VGAGTAAPAPSQ----TPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMP 837
Query: 109 HVPPRMSSPYCGPYSLRNQP-HPFPQNP 135
+ P SP PY QP +PFPQ P
Sbjct: 838 YPPVYHQSPGQAPYPGPQQPSYPFPQPP 865
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 42.7 bits (99), Expect = 6e-04
Identities = 43/148 (29%), Positives = 53/148 (35%), Gaps = 21/148 (14%)
Query: 3 AENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPP-LSEYAPPPNP 61
A + P PAY+ S GG + P P K + A P P + A P+P
Sbjct: 719 APSIPTPAYQSSPAGGHAPTPPTPAPRTM--PPTKPQPPARPPPPVLPANRAPSATAPSP 776
Query: 62 NSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMP-------------P 108
A P T P P + P YPG+ GY MP P
Sbjct: 777 VGAGTAAPAPSQ----TPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMP 832
Query: 109 HVPPRMSSPYCGPYSLRNQP-HPFPQNP 135
+ P SP PY QP +PFPQ P
Sbjct: 833 YPPVYHQSPGQAPYPGPQQPSYPFPQPP 860
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 42.4 bits (98), Expect = 8e-04
Identities = 65/249 (26%), Positives = 93/249 (37%), Gaps = 41/249 (16%)
Query: 8 APAYKVSSHGGDSGLDGLGGPGVQLGS------PDKKKRKANTQGPSFPPLSEYAPPPNP 61
APA V + G G GP Q+G P +++ Q + PP PPP P
Sbjct: 989 APASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPP---GVPPPGP 1045
Query: 62 NSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYS----TFRMPPHVPPRMSS- 116
+ +PF + S +P + P G G+PG G + F MPP PP S
Sbjct: 1046 HGP-----SPFPNQQTPPSM--MPGAVP--GSGHPGVAGNAPLGLPFGMPPPPPPPAPSI 1096
Query: 117 -PYCGPYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDN--SSFGNPSYNNALSQNVNMPN 173
P+ + P P N G + P A P N S NP + N L MP+
Sbjct: 1097 IPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPN-LPATTTMPS 1155
Query: 174 QHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPP----PNTF 229
+ P ++ +P + + V GN SPL + +PP P+
Sbjct: 1156 ---------SLPLGPGLGSAAAQSPAIVA-AVQGNLLPSASPLPDPGTPLPPDPTAPSPG 1205
Query: 230 GQAKAPPPK 238
PPP+
Sbjct: 1206 TVTPVPPPQ 1214
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 42.0 bits (97), Expect = 0.001
Identities = 59/269 (21%), Positives = 94/269 (34%), Gaps = 17/269 (6%)
Query: 44 TQGPSFPPLSEYAPPPNPNSDHLVAANPFD-DNYNTISYKPLPSSNPYLGPGYPG--FGG 100
+ G PL+ P P+ D + P N S + P S P G GYPG +G
Sbjct: 366 SSGGGGQPLAR-TPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424
Query: 101 YSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMG--FNRPHAFNFGPHDNSSFGN 158
+ R P + R S G + P Q P G G P+ PH
Sbjct: 425 QTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQ--Q 482
Query: 159 PSYNNALSQNVNMPNQHFRQNPAENFSQI---PPQNASQVSNPDLASNFVPGNNSNFTSP 215
P Y+ ++Q P Q+ P + Q S P + P + T+
Sbjct: 483 PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTT- 541
Query: 216 LESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKN 275
H PP + QA++P +Q Q A +Q ++ P Q+ +
Sbjct: 542 --QQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQS---QQTAYSQQR 596
Query: 276 VNRNNAVNQENSRSSSTEATNNNPANGTQ 304
++Q++ S ++ A + + G Q
Sbjct: 597 FPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Score = 40.8 bits (94), Expect = 0.002
Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 42/283 (14%)
Query: 38 KKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYNTI-SYKPLPSSNPYLGPGYP 96
+KR + T P + P + N+ ++ ++ N + S + P S+P++ G
Sbjct: 1200 QKRNSMTPNPGYQP--------SMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQG 1251
Query: 97 GFGG----YSTFRMPP----HVPPRMSSPYCGPYS-LRNQPHPFPQNPLGMGFNRPHAFN 147
GG YS P + PR PY GPY +R +P P+ + G +P+
Sbjct: 1252 PNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMP 1311
Query: 148 FGPHD---NSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNF 204
P + S P Q + F + S P Q + N+
Sbjct: 1312 SNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQ--QNY 1369
Query: 205 VPGNNSNFTSPLESNHS-FIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMD 263
+ + P + + P + GQ + P +Q + +Q +A P
Sbjct: 1370 KRPMDGTYGPPAKRHEGEMYSVPYSTGQGQ--PQQQQLPPAQPQPASQQQAAQPSP--QQ 1425
Query: 264 DTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNK 306
D NQ NA +++T AT PA G QN+
Sbjct: 1426 DVYNQYG---------NAYP-----ATATAATERRPAGGPQNQ 1454
Score = 40.4 bits (93), Expect = 0.003
Identities = 75/339 (22%), Positives = 106/339 (31%), Gaps = 50/339 (14%)
Query: 21 GLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYNTIS 80
G G G G Q +P ++ + Q PP S+ P P++ P S
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQ-PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQS 513
Query: 81 YKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMGF 140
+P S P P Y + + P+ PY P + PQ P
Sbjct: 514 SQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPA---- 569
Query: 141 NRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQ---IPPQNASQVSN 197
PS LSQ P +Q+ +SQ PPQ SQ S
Sbjct: 570 ------------------PS---TLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSF 608
Query: 198 PDLASN-----FVPGNNSNFTSPLESNHSFIP---------PPNTFGQAKAPPPKQDFTQ 243
AS+ G + L+S S +P P T G +
Sbjct: 609 GSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISS 668
Query: 244 GATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPANGT 303
+ +N S PH + V +V Q S S A G
Sbjct: 669 SQGEQSNPAQSPFSPHTS-PHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA-----VPGN 722
Query: 304 QNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYP 342
Q PR P G +D+ N+SS+ +R G+ +P P
Sbjct: 723 QMPPRPPSGQSDSIMHPSMNQSSIAQDR-GYMQRNPQMP 760
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 42.0 bits (97), Expect = 0.001
Identities = 59/269 (21%), Positives = 94/269 (34%), Gaps = 17/269 (6%)
Query: 44 TQGPSFPPLSEYAPPPNPNSDHLVAANPFD-DNYNTISYKPLPSSNPYLGPGYPG--FGG 100
+ G PL+ P P+ D + P N S + P S P G GYPG +G
Sbjct: 366 SSGGGGQPLAR-TPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424
Query: 101 YSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMG--FNRPHAFNFGPHDNSSFGN 158
+ R P + R S G + P Q P G G P+ PH
Sbjct: 425 QTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQ--Q 482
Query: 159 PSYNNALSQNVNMPNQHFRQNPAENFSQI---PPQNASQVSNPDLASNFVPGNNSNFTSP 215
P Y+ ++Q P Q+ P + Q S P + P + T+
Sbjct: 483 PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTT- 541
Query: 216 LESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKN 275
H PP + QA++P +Q Q A +Q ++ P Q+ +
Sbjct: 542 --QQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQS---QQTAYSQQR 596
Query: 276 VNRNNAVNQENSRSSSTEATNNNPANGTQ 304
++Q++ S ++ A + + G Q
Sbjct: 597 FPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Score = 40.4 bits (93), Expect = 0.003
Identities = 75/339 (22%), Positives = 106/339 (31%), Gaps = 50/339 (14%)
Query: 21 GLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYNTIS 80
G G G G Q +P ++ + Q PP S+ P P++ P S
Sbjct: 455 GQQGPSGYGQQGQTPYYNQQSPHPQQQQ-PPYSQQPPSQTPHAQPSYQQQPQSQPPQLQS 513
Query: 81 YKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMGF 140
+P S P P Y + + P+ PY P + PQ P
Sbjct: 514 SQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPA---- 569
Query: 141 NRPHAFNFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQ---IPPQNASQVSN 197
PS LSQ P +Q+ +SQ PPQ SQ S
Sbjct: 570 ------------------PS---TLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSF 608
Query: 198 PDLASN-----FVPGNNSNFTSPLESNHSFIP---------PPNTFGQAKAPPPKQDFTQ 243
AS+ G + L+S S +P P T G +
Sbjct: 609 GSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISS 668
Query: 244 GATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPANGT 303
+ +N S PH + V +V Q S S A G
Sbjct: 669 SQGEQSNPAQSPFSPHTS-PHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA-----VPGN 722
Query: 304 QNKPRQPRGAADACTTEKSNKSSLHPNRHGHSSSDPVYP 342
Q PR P G +D+ N+SS+ +R G+ +P P
Sbjct: 723 QMPPRPPSGQSDSIMHPSMNQSSIAQDR-GYMQRNPQMP 760
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 40.8 bits (94), Expect = 0.002
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 338 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMT 375
D + P C D+ D + C+ SC +WFH++C G++
Sbjct: 1484 DAICPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVS 1521
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 40.8 bits (94), Expect = 0.002
Identities = 64/262 (24%), Positives = 91/262 (34%), Gaps = 43/262 (16%)
Query: 2 PAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKAN-------TQGPSFPPLSE 54
P P+P + S+ G L G PG G + +A GP+ P
Sbjct: 768 PLHFPPSP-FPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPA 826
Query: 55 YAPP----PNPNSDHLVAANPFDDNYNTISYKPLPSSNP--YLGPGY-----PGFGGYST 103
Y P P + H V ++P+ LPS+ P + GP P +
Sbjct: 827 YTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPPQFSGPELAMAVRPATTTVDS 886
Query: 104 FR--MPPHVPPRMSS-----PYCGPYSLRNQPHPFPQN-PLGMGFNRPHAFNFGPHDNSS 155
+ +P H PR + P C P QP P P P G P +F +
Sbjct: 887 IQAPIPSHTAPRPNPTPAPPPPCFPVP-PPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAG 945
Query: 156 FGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSP 215
F P P H + +P++ F PPQ + +P L PG P
Sbjct: 946 FPAPRIGP-------QPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPG-----LLP 993
Query: 216 LESNHSFIPPPNTFGQAKAPPP 237
+S + + P P GQ PPP
Sbjct: 994 PQSPYPYAPQPGVLGQ---PPP 1012
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo
sapiens]
Length = 1758
Score = 40.8 bits (94), Expect = 0.002
Identities = 63/247 (25%), Positives = 96/247 (38%), Gaps = 40/247 (16%)
Query: 39 KRKANTQGPSFP--PLSEYAPPP--NPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPG 94
+R TQGPS P P+ PPP P H + P P P +P PG
Sbjct: 540 ERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPP---------GVPPPQFSPQFPPG 590
Query: 95 YPGFGGYSTFRMPPHVPP---RMSSPY--CGPYSLRNQPHPFPQNP------LGMGFNRP 143
P GYS PP PP +S+P+ G + + P Q P R
Sbjct: 591 QPPPAGYSV--PPPGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRL 648
Query: 144 HAFNFGPHDNSSFGNPSYNNALSQNVNMP----NQHFRQNPAENFSQIPP---QNASQVS 196
+ P+ SS+ SY + S++ + ++ F ++ + ++S+ PP + +
Sbjct: 649 KEESKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSR 708
Query: 197 NPDLASNFVPGNNSNFTS-PLESNHSFIPPPNTF-GQAKAPPPKQDFTQGATKNT--NQN 252
N S + S S P HS P F GQ+ P K++ QG T+ N+
Sbjct: 709 NYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS---PNKRNVPQGETEREYFNRY 765
Query: 253 SSAHPPH 259
PP+
Sbjct: 766 REVPPPY 772
Score = 32.7 bits (73), Expect = 0.63
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 9/137 (6%)
Query: 206 PGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHL-NMDD 264
P N T P S + N G K+ + + K+ + +S++ N D
Sbjct: 1382 PEKRKNSTQP--EKESNLDRLNEQGNFKSLSQSSKEARTSDKHDSTRASSNKDFTPNRDK 1439
Query: 265 TVNQSNIELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNK 324
+ E + R + N E +R + + N + A+G +NKPR+ R T + S K
Sbjct: 1440 KTDYDTREYSSSKRRDEKN-ELTRRKDSPSRNKDSASGQKNKPREERDLPKKGTGD-SKK 1497
Query: 325 SSLHPNR----HGHSSS 337
S+ P+R H H ++
Sbjct: 1498 SNSSPSRDRKPHDHKAT 1514
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.8 bits (94), Expect = 0.002
Identities = 70/272 (25%), Positives = 93/272 (34%), Gaps = 27/272 (9%)
Query: 9 PAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN----PNSD 64
P Y SS+GG SG P P ++ QG S P S APP + P
Sbjct: 21 PGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQ 80
Query: 65 HLVAANPFDDNYN----TISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG 120
D N T+ + LP S P+ P P G + P+ PP S+
Sbjct: 81 AAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP--VGNQPPVLQPYGPPPTSAQVAT 138
Query: 121 PYS---LRNQPHPFPQNPLGMGFNRPH--AFNFGPHDNSS-FGNPSYNNA--LSQNVNMP 172
S + P P + G+GF P A G NS +G+ A LSQ P
Sbjct: 139 QLSGMQISGAVAPAPPSS-GLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP 197
Query: 173 NQHF--RQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNH-----SFIPP 225
R P++ S PP + P + +PG + S + NH +PP
Sbjct: 198 GIQTPQRSAPSQASSFTPPASGGP-RLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPP 256
Query: 226 PNTFGQAKAPPPKQDFTQGATKNTNQNSSAHP 257
P P Q QN S P
Sbjct: 257 GTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGP 288
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.8 bits (94), Expect = 0.002
Identities = 70/272 (25%), Positives = 93/272 (34%), Gaps = 27/272 (9%)
Query: 9 PAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPN----PNSD 64
P Y SS+GG SG P P ++ QG S P S APP + P
Sbjct: 21 PGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQ 80
Query: 65 HLVAANPFDDNYN----TISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCG 120
D N T+ + LP S P+ P P G + P+ PP S+
Sbjct: 81 AAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP--VGNQPPVLQPYGPPPTSAQVAT 138
Query: 121 PYS---LRNQPHPFPQNPLGMGFNRPH--AFNFGPHDNSS-FGNPSYNNA--LSQNVNMP 172
S + P P + G+GF P A G NS +G+ A LSQ P
Sbjct: 139 QLSGMQISGAVAPAPPSS-GLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP 197
Query: 173 NQHF--RQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNH-----SFIPP 225
R P++ S PP + P + +PG + S + NH +PP
Sbjct: 198 GIQTPQRSAPSQASSFTPPASGGP-RLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPP 256
Query: 226 PNTFGQAKAPPPKQDFTQGATKNTNQNSSAHP 257
P P Q QN S P
Sbjct: 257 GTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGP 288
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 40.4 bits (93), Expect = 0.003
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 38/155 (24%)
Query: 18 GDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYN 77
G++G DG+G G SPD PL + PPP+P
Sbjct: 66 GEAGRDGMGDSGRDSRSPDSSSPN---------PLPQGVPPPSPPGP------------- 103
Query: 78 TISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYCGPYSLRNQPHPFPQNPLG 137
PLP S P GG PP PP + SP+ P + P P
Sbjct: 104 -----PLPPSTA------PSLGGSGAPPPPPMPPPPLGSPF--PVISSSMGSPGLPPPAP 150
Query: 138 MGFNRPHAFNFGPHDNSSFGNPSYNNALSQNVNMP 172
GF+ P + P NS+ P + ++V P
Sbjct: 151 PGFSGPVS---SPQINSTVSLPGGGSGPPEDVKPP 182
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.003
Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 38/234 (16%)
Query: 28 PGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSS 87
PG + G P+ ++ + P + PPP P++ + ++P + + P S
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214
Query: 88 NPYLGPGYPG-----FGGYSTFRMP----------PHVPPRMSSPYCGPYSLRNQPHPFP 132
P +PG GG S + P P +PP S +L ++P P P
Sbjct: 215 PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR------ALDDKPPP-P 267
Query: 133 QNPLGMGFNRP----HAFNFGPHDNSSFGNPS--YNNALSQNVNMPNQHFRQNPAENFSQ 186
P+G NRP A P N+ PS +A SQ P R P
Sbjct: 268 PPPVG---NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PP 320
Query: 187 IPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD 240
+PP ++ P L + ++S P +PPP + + PPP +D
Sbjct: 321 LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS---ERPPPPVRD 371
Score = 30.8 bits (68), Expect = 2.4
Identities = 47/202 (23%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 2 PAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPP-- 59
P + P P S G+ L + L S GP PP SE PPP
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR 370
Query: 60 NPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYC 119
+P P + N + + LP++ P P G + R P P P
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPAT-----PQLPSRSGVDSPRSGPRPPLPPDRPSA 425
Query: 120 GPYSLRNQPHPFPQNPLGMGFNR-------PHAFNFGPHDNSSFGNP------SYNNALS 166
G P P P + GF F F P + P SY + L+
Sbjct: 426 GA-----PPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLA 480
Query: 167 QNVNMPNQHFRQNPAENFSQIP 188
+N + + R+ A IP
Sbjct: 481 RNESRSGSNRRERGAPPLPPIP 502
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.003
Identities = 56/234 (23%), Positives = 88/234 (37%), Gaps = 38/234 (16%)
Query: 28 PGVQLGSPDKKKRKANTQGPSFPPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSS 87
PG + G P+ ++ + P + PPP P++ + ++P + + P S
Sbjct: 155 PGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPS 214
Query: 88 NPYLGPGYPG-----FGGYSTFRMP----------PHVPPRMSSPYCGPYSLRNQPHPFP 132
P +PG GG S + P P +PP S +L ++P P P
Sbjct: 215 PGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSR------ALDDKPPP-P 267
Query: 133 QNPLGMGFNRP----HAFNFGPHDNSSFGNPS--YNNALSQNVNMPNQHFRQNPAENFSQ 186
P+G NRP A P N+ PS +A SQ P R P
Sbjct: 268 PPPVG---NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP----PP 320
Query: 187 IPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQD 240
+PP ++ P L + ++S P +PPP + + PPP +D
Sbjct: 321 LPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPS---ERPPPPVRD 371
Score = 30.8 bits (68), Expect = 2.4
Identities = 47/202 (23%), Positives = 65/202 (32%), Gaps = 25/202 (12%)
Query: 2 PAENSPAPAYKVSSHGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPSFPPLSEYAPPP-- 59
P + P P S G+ L + L S GP PP SE PPP
Sbjct: 311 PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVR 370
Query: 60 NPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMPPHVPPRMSSPYC 119
+P P + N + + LP++ P P G + R P P P
Sbjct: 371 DPPGRSGPLPPPPPVSRNGSTSRALPAT-----PQLPSRSGVDSPRSGPRPPLPPDRPSA 425
Query: 120 GPYSLRNQPHPFPQNPLGMGFNR-------PHAFNFGPHDNSSFGNP------SYNNALS 166
G P P P + GF F F P + P SY + L+
Sbjct: 426 GA-----PPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPSKLA 480
Query: 167 QNVNMPNQHFRQNPAENFSQIP 188
+N + + R+ A IP
Sbjct: 481 RNESRSGSNRRERGAPPLPPIP 502
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 40.4 bits (93), Expect = 0.003
Identities = 67/267 (25%), Positives = 102/267 (38%), Gaps = 45/267 (16%)
Query: 111 PPRMSSPYC--GPYSLRNQPHPFPQNPLGMGFNRPH-AFNFGPHDNS----SFGNPSYNN 163
P + S P G L + P P NP G + P+ P D + G+P +
Sbjct: 872 PDQSSMPMSNVGTTRLSHMPLPPASNPPGTVHSAPNRGLGRRPSDLTISINQMGSPGMGH 931
Query: 164 ALSQNVNMPNQHFRQNPAENFSQIPPQNASQV-----SNPD--LASNFVPGNNSNFTSP- 215
S ++ + +P+ N PQ SQ+ +NP L S V G++ + SP
Sbjct: 932 LKSPTLSQVHSPLVTSPSANLKS--PQTPSQMVPLPSANPPGPLKSPQVLGSSLSVRSPT 989
Query: 216 -----LESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSN 270
L+S +P P K P + G ++N P LNM+ + SN
Sbjct: 990 GSPSRLKSPSMAVPSPGWVASPKTAMP----SPGVSQNKQ-------PPLNMNSSTTLSN 1038
Query: 271 IELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSL--- 327
+E + RSSS+ A NP +G N + D T N SL
Sbjct: 1039 ME------QGTLPPSGPRSSSS-APPANPPSGLMNPSLPFTSSPD--PTPSQNPLSLMMT 1089
Query: 328 HPNRHGHSSSDPVYPCGICTNEVNDDQ 354
+++ SS P+Y I T +DD+
Sbjct: 1090 QMSKYAMPSSTPLYHNAIKTIATSDDE 1116
Score = 32.3 bits (72), Expect = 0.82
Identities = 52/225 (23%), Positives = 76/225 (33%), Gaps = 33/225 (14%)
Query: 44 TQGPSFPPLSEYAPPPNPNS-------------DHLVAANPFDDNYNTISYKPLPSSNPY 90
T PS P S APP NP S D + NP +S +PSS P
Sbjct: 1043 TLPPSGPRSSSSAPPANPPSGLMNPSLPFTSSPDPTPSQNPLSLMMTQMSKYAMPSSTPL 1102
Query: 91 LGPGYPGFGGYSTFRMP--PHVPPRMSSPYCGPYSLRNQPHPF------PQNPLGMGFNR 142
+P P +PP GP +QP Q+P+GM
Sbjct: 1103 YHNAIKTIATSDDELLPDRPLLPPPPPPQGSGPGISNSQPSQMHLNSAAAQSPMGMNLPG 1162
Query: 143 PHAFNFGPHDNSSFGNPSYNNALSQNVNM-PNQHFRQNPAENFSQIPPQNASQVSNPDLA 201
+ P + +P+ L N+ + PN P +N + P ++ P
Sbjct: 1163 QQPLSHEP-PPAMLPSPT---PLGSNIPLHPNAQGTGGPPQNSMMMAPGGPDSLNAP--- 1215
Query: 202 SNFVPGNNSNFTSP--LESNHSFIPPPNTFGQAKAPPPKQDFTQG 244
VP ++ P L+ H + P T G P +Q + G
Sbjct: 1216 CGPVPSSSQMMPFPPRLQQPHGAMAP--TGGGGGGPGLQQHYPSG 1258
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 40.4 bits (93), Expect = 0.003
Identities = 44/167 (26%), Positives = 64/167 (38%), Gaps = 24/167 (14%)
Query: 50 PPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSSNP--YLGPGYPGF-------GG 100
PP Y+ PP P+S + +P +N S PLP+S+P + GP P
Sbjct: 928 PPEPPYSTPPVPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSL 987
Query: 101 YSTFRMPP--HVPPRMSSPYCGP----YSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNS 154
Y + +PP H PP + P + + PHP G + P GP S
Sbjct: 988 YHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQP-S 1046
Query: 155 SFGNPSYNNALSQNVNMPNQH--------FRQNPAENFSQIPPQNAS 193
G + + P+ H Q PA + Q+PP+ AS
Sbjct: 1047 LRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAAS 1093
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 40.0 bits (92), Expect = 0.004
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 273 LKNVNR-----NNAVNQENSRSSSTEATNNNPANGTQNKPRQ-PRGAADACTTEKSNKSS 326
LK NR ++A+ S S S T N ++ ++P + P +AD TE S S
Sbjct: 597 LKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSK 656
Query: 327 LHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAE- 385
+ G ++ Y C +C + +LCE C FH C G++ G T
Sbjct: 657 --KSERGVTAKKE-YVCQLCEKPGS----LLLCEGPCCGAFHLACLGLSRRPEGRFTCSE 709
Query: 386 -ASAVWGCDTCMADK 399
AS + C C K
Sbjct: 710 CASGIHSCFVCKESK 724
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 40.0 bits (92), Expect = 0.004
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 273 LKNVNR-----NNAVNQENSRSSSTEATNNNPANGTQNKPRQ-PRGAADACTTEKSNKSS 326
LK NR ++A+ S S S T N ++ ++P + P +AD TE S S
Sbjct: 597 LKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSK 656
Query: 327 LHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAE- 385
+ G ++ Y C +C + +LCE C FH C G++ G T
Sbjct: 657 --KSERGVTAKKE-YVCQLCEKPGS----LLLCEGPCCGAFHLACLGLSRRPEGRFTCSE 709
Query: 386 -ASAVWGCDTCMADK 399
AS + C C K
Sbjct: 710 CASGIHSCFVCKESK 724
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 40.0 bits (92), Expect = 0.004
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 273 LKNVNR-----NNAVNQENSRSSSTEATNNNPANGTQNKPRQ-PRGAADACTTEKSNKSS 326
LK NR ++A+ S S S T N ++ ++P + P +AD TE S S
Sbjct: 597 LKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSK 656
Query: 327 LHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAE- 385
+ G ++ Y C +C + +LCE C FH C G++ G T
Sbjct: 657 --KSERGVTAKKE-YVCQLCEKPGS----LLLCEGPCCGAFHLACLGLSRRPEGRFTCSE 709
Query: 386 -ASAVWGCDTCMADK 399
AS + C C K
Sbjct: 710 CASGIHSCFVCKESK 724
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 40.0 bits (92), Expect = 0.004
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 273 LKNVNR-----NNAVNQENSRSSSTEATNNNPANGTQNKPRQ-PRGAADACTTEKSNKSS 326
LK NR ++A+ S S S T N ++ ++P + P +AD TE S S
Sbjct: 597 LKKRNRASTAASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSK 656
Query: 327 LHPNRHGHSSSDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAE- 385
+ G ++ Y C +C + +LCE C FH C G++ G T
Sbjct: 657 --KSERGVTAKKE-YVCQLCEKPGS----LLLCEGPCCGAFHLACLGLSRRPEGRFTCSE 709
Query: 386 -ASAVWGCDTCMADK 399
AS + C C K
Sbjct: 710 CASGIHSCFVCKESK 724
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 40.0 bits (92), Expect = 0.004
Identities = 35/188 (18%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 152 DNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSN 211
D+S N S ++ S + + N N +++ N+S SN +SN ++SN
Sbjct: 913 DSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSN 972
Query: 212 FTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNI 271
+ +S++S D + + + + NSS + D+ N S+
Sbjct: 973 SSDSSDSSNS-----------SDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDS 1021
Query: 272 ELKNVNRNNAVNQENSRSS-STEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPN 330
+ + N++ + ++S SS S+++++++ ++ + N + + +++ S+ S +
Sbjct: 1022 SNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDS 1081
Query: 331 RHGHSSSD 338
SSD
Sbjct: 1082 SESSDSSD 1089
Score = 37.4 bits (85), Expect = 0.026
Identities = 34/175 (19%), Positives = 77/175 (44%), Gaps = 5/175 (2%)
Query: 153 NSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNF 212
+SS + S N++ S + + + + + + S N S SN +S+ +NS+
Sbjct: 819 DSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSD 878
Query: 213 TSPL-ESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNI 271
+S +SN S ++ + D + + + + NSS N D N S+
Sbjct: 879 SSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD- 937
Query: 272 ELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSS 326
+ N +++ + +S +SS + +++ +N + + ++D+ + S+ SS
Sbjct: 938 ---SSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSS 989
Score = 34.3 bits (77), Expect = 0.22
Identities = 30/190 (15%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 152 DNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSN 211
D+S + S ++ + + N + N +++ + ++S S+ D +++ N+S+
Sbjct: 772 DSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSD 831
Query: 212 FTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNI 271
+ S+ S ++ G + D + + + + +SS N D+ + S+
Sbjct: 832 SSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSS------NSSDSSDSSDS 885
Query: 272 ELKNVNRNNAVNQENSRSSSTEATNNNPANGTQN---KPRQPRGAADACTTEKSNKSSLH 328
+ + +++ + +S S S++++N++ ++ + N + ++ +++ SN S
Sbjct: 886 NESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSS 945
Query: 329 PNRHGHSSSD 338
+ +SSD
Sbjct: 946 DSSDSSNSSD 955
Score = 33.5 bits (75), Expect = 0.37
Identities = 26/194 (13%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 147 NFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVP 206
N +SS + S +++ S + + + +++ S+ +++ + D + +
Sbjct: 600 NSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDS 659
Query: 207 GNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTV 266
N+SN + +S+ S ++ + + ++++++ + S+ + D+
Sbjct: 660 SNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSS 719
Query: 267 NQSNIELKNVNRNNAVNQENSRSSS--TEATNNNPANGTQNKPRQPRGAADACTTEKSNK 324
N ++ + + N +++ + NS SS ++++N++ ++ + + + + +++ S+
Sbjct: 720 NSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779
Query: 325 SSLHPNRHGHSSSD 338
S+ + +SSD
Sbjct: 780 SNSSDSNDSSNSSD 793
Score = 32.7 bits (73), Expect = 0.63
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 236 PPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENSRSSSTEAT 295
P D + G N + NS + + D S+ N N +++ E+ S ST T
Sbjct: 465 PNSSDESNG---NDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDT 521
Query: 296 NNNPANGTQN-------KPRQPRGAADACTTEKSNKSS 326
NN+ +NG N K +G +D+ ++ S+ S+
Sbjct: 522 NNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSN 559
Score = 32.3 bits (72), Expect = 0.82
Identities = 29/187 (15%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 153 NSSFGNPSYNNA-LSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSN 211
NSS + S N++ S + + N + +++ + ++S S+ +SN N+S+
Sbjct: 730 NSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSS 789
Query: 212 FTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNI 271
+S + + N+ + + + ++ ++N + S+ + + + S+
Sbjct: 790 NSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSD 849
Query: 272 ELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNR 331
+ + N + + +S SS + ++N+ + + + ++D+ + S+ S +
Sbjct: 850 GSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSS 909
Query: 332 HGHSSSD 338
+ SSD
Sbjct: 910 NSSDSSD 916
Score = 30.8 bits (68), Expect = 2.4
Identities = 30/187 (16%), Positives = 82/187 (43%), Gaps = 8/187 (4%)
Query: 152 DNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSN 211
D++S N S +N N N N + + + S ++S SN +S+ ++S+
Sbjct: 516 DSTSDTNNSDSNGNGNNGNDDND--KSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSD 573
Query: 212 FTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNI 271
S +S+ S ++ + + ++ +++ + S+ D + ++S+
Sbjct: 574 SNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESD- 632
Query: 272 ELKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNR 331
+ ++ ++S S+S+++++N+ ++ + N + + +++ S+ S +
Sbjct: 633 -----SSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSS 687
Query: 332 HGHSSSD 338
SSD
Sbjct: 688 DSSDSSD 694
Score = 30.4 bits (67), Expect = 3.1
Identities = 29/153 (18%), Positives = 66/153 (43%), Gaps = 8/153 (5%)
Query: 191 NASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTN 250
N+S SN + +N NNS+ N +K +D +T +TN
Sbjct: 466 NSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGA---EDDDSDSTSDTN 522
Query: 251 QNSSAHPPHLNMDDTVNQSNIELK-----NVNRNNAVNQENSRSSSTEATNNNPANGTQN 305
+ S + DD + + K + + +++ + ++S SS ++++++N ++ + +
Sbjct: 523 NSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDS 582
Query: 306 KPRQPRGAADACTTEKSNKSSLHPNRHGHSSSD 338
++D+ +++ SN S + SSD
Sbjct: 583 SDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSD 615
Score = 30.0 bits (66), Expect = 4.1
Identities = 29/186 (15%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 153 NSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNF 212
+S N S ++ S + + + N +++ N+S S+ +S+ +NS+
Sbjct: 725 DSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSD 784
Query: 213 TSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIE 272
++ ++ N+ + + + ++N + S++ + D+ N S+
Sbjct: 785 SNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSS--DSSDSSNSSDSS 842
Query: 273 LKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNRH 332
+ + + + + ++RS S+ +++++ ++ + N ++D+ + S+ SS N
Sbjct: 843 DSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNS-SDSSDSSDSNESSNSSDSSDSSNSS 901
Query: 333 GHSSSD 338
SSD
Sbjct: 902 DSDSSD 907
Score = 29.6 bits (65), Expect = 5.3
Identities = 32/193 (16%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Query: 147 NFGPHDNSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVP 206
N +SS N S N++ S + + + + + + N+S S +SN
Sbjct: 875 NSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSE---SSNSSD 931
Query: 207 GNNSNFTSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTV 266
+NS+ +S++S ++ + + ++ +++ NSS N D+
Sbjct: 932 NSNSS-----DSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSS 986
Query: 267 NQSNIELKNVNRNNAVNQENSRSS-STEATNNNPANGTQNKPRQPRGAADACTTEKSNKS 325
+ S+ + + +++ + ++S SS S++++N++ ++ + + + + +++ S+ S
Sbjct: 987 DSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSS 1046
Query: 326 SLHPNRHGHSSSD 338
+ +SSD
Sbjct: 1047 DSSDSSDSSNSSD 1059
Score = 28.9 bits (63), Expect = 9.1
Identities = 28/185 (15%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 153 NSSFGNPSYNNALSQNVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNF 212
N+S N + NN N + + + +++ S ++ + D S+ N+S+
Sbjct: 522 NNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSD--SDSSDSNSSSD 579
Query: 213 TSPLESNHSFIPPPNTFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIE 272
+ +S+ S ++ + + + +++ +S + + + S+ +
Sbjct: 580 SDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSK 639
Query: 273 LKNVNRNNAVNQENSRSSSTEATNNNPANGTQNKPRQPRGAADACTTEKSNKSSLHPNRH 332
+ + N++ + +NS SS + ++N+ + + ++D+ + S+ SS N
Sbjct: 640 SDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSS 699
Query: 333 GHSSS 337
S S
Sbjct: 700 ESSDS 704
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 20/76 (26%)
Query: 51 PLSEYAPPPNPNSDHLVAANP--FDDNYNTISYKPLPSSNPY-------------LGPGY 95
P Y P P+P S H VA +P + + ++ SY P PS Y + PG
Sbjct: 894 PQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGA 953
Query: 96 PGFGGYSTFRMPPHVP 111
P GGY+ PH P
Sbjct: 954 PSPGGYN-----PHTP 964
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 20/76 (26%)
Query: 51 PLSEYAPPPNPNSDHLVAANP--FDDNYNTISYKPLPSSNPY-------------LGPGY 95
P Y P P+P S H VA +P + + ++ SY P PS Y + PG
Sbjct: 898 PQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGA 957
Query: 96 PGFGGYSTFRMPPHVP 111
P GGY+ PH P
Sbjct: 958 PSPGGYN-----PHTP 968
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 20/76 (26%)
Query: 51 PLSEYAPPPNPNSDHLVAANP--FDDNYNTISYKPLPSSNPY-------------LGPGY 95
P Y P P+P S H VA +P + + ++ SY P PS Y + PG
Sbjct: 898 PQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGA 957
Query: 96 PGFGGYSTFRMPPHVP 111
P GGY+ PH P
Sbjct: 958 PSPGGYN-----PHTP 968
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 40.0 bits (92), Expect = 0.004
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 20/76 (26%)
Query: 51 PLSEYAPPPNPNSDHLVAANP--FDDNYNTISYKPLPSSNPY-------------LGPGY 95
P Y P P+P S H VA +P + + ++ SY P PS Y + PG
Sbjct: 898 PQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGA 957
Query: 96 PGFGGYSTFRMPPHVP 111
P GGY+ PH P
Sbjct: 958 PSPGGYN-----PHTP 968
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 40.0 bits (92), Expect = 0.004
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 46 GPSFPPLSEYAPPPNPNSDHLVAANPFDDN-YNTISYKPLPSSNPYLGPGYPGFGGYSTF 104
GP PP+ YA PP P + + PF + Y Y PS PY GYP G Y
Sbjct: 24 GPQ-PPMPPYAQPPYPGAPY--PQPPFQPSPYGQPGYPHGPS--PYPQGGYPQ-GPYPQG 77
Query: 105 RMPPHVPPRMSSPYCGPYSLRNQPH-PFPQNPLGMG-FNRPHAFNFGPHDNSSFGN---- 158
P P+ P GPY P P+PQ+P + +P F D+ GN
Sbjct: 78 GYPQGPYPQEGYPQ-GPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEE 136
Query: 159 --PSY 161
PSY
Sbjct: 137 GPPSY 141
Score = 37.4 bits (85), Expect = 0.026
Identities = 47/193 (24%), Positives = 59/193 (30%), Gaps = 45/193 (23%)
Query: 48 SFPPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMP 107
SF + PPPNP P P PY P YPG P
Sbjct: 6 SFLVSGDNYPPPNPGYPG----------------GPQPPMPPYAQPPYPG--------AP 41
Query: 108 PHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQ 167
PP SPY P + P P+PQ G + GP+ + Y
Sbjct: 42 YPQPPFQPSPYGQP-GYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPY------ 94
Query: 168 NVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPN 227
P + Q P S PP NP PG + + SP N+ PP+
Sbjct: 95 ----PQGGYPQGPYPQ-SPFPP-------NPYGQPQVFPGQDPD--SPQHGNYQEEGPPS 140
Query: 228 TFGQAKAPPPKQD 240
+ P D
Sbjct: 141 YYDNQDFPATNWD 153
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 40.0 bits (92), Expect = 0.004
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 46 GPSFPPLSEYAPPPNPNSDHLVAANPFDDN-YNTISYKPLPSSNPYLGPGYPGFGGYSTF 104
GP PP+ YA PP P + + PF + Y Y PS PY GYP G Y
Sbjct: 24 GPQ-PPMPPYAQPPYPGAPY--PQPPFQPSPYGQPGYPHGPS--PYPQGGYPQ-GPYPQG 77
Query: 105 RMPPHVPPRMSSPYCGPYSLRNQPH-PFPQNPLGMG-FNRPHAFNFGPHDNSSFGN---- 158
P P+ P GPY P P+PQ+P + +P F D+ GN
Sbjct: 78 GYPQGPYPQEGYPQ-GPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEE 136
Query: 159 --PSY 161
PSY
Sbjct: 137 GPPSY 141
Score = 37.4 bits (85), Expect = 0.026
Identities = 47/193 (24%), Positives = 59/193 (30%), Gaps = 45/193 (23%)
Query: 48 SFPPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLPSSNPYLGPGYPGFGGYSTFRMP 107
SF + PPPNP P P PY P YPG P
Sbjct: 6 SFLVSGDNYPPPNPGYPG----------------GPQPPMPPYAQPPYPG--------AP 41
Query: 108 PHVPPRMSSPYCGPYSLRNQPHPFPQNPLGMGFNRPHAFNFGPHDNSSFGNPSYNNALSQ 167
PP SPY P + P P+PQ G + GP+ + Y
Sbjct: 42 YPQPPFQPSPYGQP-GYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQEGYPQGPY------ 94
Query: 168 NVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPN 227
P + Q P S PP NP PG + + SP N+ PP+
Sbjct: 95 ----PQGGYPQGPYPQ-SPFPP-------NPYGQPQVFPGQDPD--SPQHGNYQEEGPPS 140
Query: 228 TFGQAKAPPPKQD 240
+ P D
Sbjct: 141 YYDNQDFPATNWD 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,721,283
Number of Sequences: 37866
Number of extensions: 1286534
Number of successful extensions: 5032
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 4414
Number of HSP's gapped (non-prelim): 829
length of query: 419
length of database: 18,247,518
effective HSP length: 105
effective length of query: 314
effective length of database: 14,271,588
effective search space: 4481278632
effective search space used: 4481278632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.