WHSC1 11574

Name: WHSC1	Sequence: fasta or formatted (1365aa)		NCBI GI: 19913358
Description: Wolf-Hirschhorn syndrome candidate 1 protein isoform 1		Referenced in: Additional Brain Proteins Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins Small RNAs in RNA Processing
Other entries for this name: alt mRNA [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt mRNA [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt mRNA [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt prot [647aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 3 alt prot [629aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 97 2 C cysteine 5.2 71 2 D aspartate 4.3 59 1 E glutamate 8.0 109 3 F phenylalanine 3.8 52 3 G glycine 7.0 95 2 H histidine 2.8 38 2 I isoleucine 3.4 47 2 K lysine 9.7 132 3 L leucine 5.9 81 3 M methionine 1.6 22 2 N asparagine 3.4 47 1 P proline 5.9 81 3 Q glutamine 3.4 47 1 R arginine 6.4 87 5 S serine 8.9 121 3 T threonine 4.7 64 2 V valine 5.1 69 2 W tryptophan 1.2 17 2 Y tyrosine 2.1 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 1.000 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 1.000 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 1.000 Wolf-Hirschhorn syndrome candidate 1 protein isofor... WHSC1 0.431 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... WHSC1 0.431 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1L1 0.408 WHSC1L1 protein isoform long NSD1 0.363 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.363 nuclear receptor binding SET domain protein 1 isofor... SETD2 0.063 SET domain containing 2 WHSC1L1 0.063 WHSC1L1 protein isoform short ASH1L 0.057 absent, small, or homeotic 1-like SUV39H2 0.027 suppressor of variegation 3-9 homolog 2 EZH1 0.026 enhancer of zeste homolog 1 EZH2 0.025 enhancer of zeste 2 isoform b EZH2 0.025 enhancer of zeste 2 isoform a SETD1B 0.023 SET domain containing 1B MLL 0.023 myeloid/lymphoid or mixed-lineage leukemia protein [... SUV39H1 0.023 suppressor of variegation 3-9 homolog 1 SETMAR 0.021 SET domain and mariner transposase fusion MLL2 0.021 myeloid/lymphoid or mixed-lineage leukemia 2 SETD1A 0.020 SET domain containing 1A EHMT2 0.019 euchromatic histone-lysine N-methyltransferase 2 is... EHMT2 0.019 euchromatic histone-lysine N-methyltransferase 2 is... MLL4 0.019 myeloid/lymphoid or mixed-lineage leukemia 4 MLL3 0.019 myeloid/lymphoid or mixed-lineage leukemia 3 EHMT1 0.019 euchromatic histone-lysine N-methyltransferase 1 is... MSH6 0.017 mutS homolog 6 ZCWPW1 0.014 zinc finger, CW type with PWWP domain 1 CHD5 0.013 chromodomain helicase DNA binding protein 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.