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Search of human proteins with 30840980
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens]
(498 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens] 1027 0.0
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens] 974 0.0
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens] 974 0.0
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens] 955 0.0
gi|56549649 nuclear factor I/X (CCAAT-binding transcription fact... 602 e-172
gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens] 538 e-153
gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens] 512 e-145
gi|93004092 nuclear factor I/B [Homo sapiens] 502 e-142
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 59 1e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 4e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 53 6e-07
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 52 1e-06
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 52 1e-06
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 52 1e-06
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 52 1e-06
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 52 1e-06
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 52 1e-06
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 50 4e-06
gi|50345997 E1A binding protein p300 [Homo sapiens] 49 8e-06
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 49 1e-05
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 49 1e-05
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 49 1e-05
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 49 1e-05
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 48 2e-05
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 48 2e-05
gi|124378039 SEC16 homolog A [Homo sapiens] 48 2e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 48 2e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 3e-05
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 47 4e-05
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 47 5e-05
>gi|30840980 nuclear factor I/A isoform 2 [Homo sapiens]
Length = 498
Score = 1027 bits (2655), Expect = 0.0
Identities = 498/498 (100%), Positives = 498/498 (100%)
Query: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL
Sbjct: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
Query: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL
Sbjct: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
Query: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT
Sbjct: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
Query: 241 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 300
GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS
Sbjct: 241 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 300
Query: 301 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 360
PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS
Sbjct: 301 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 360
Query: 361 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 420
PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN
Sbjct: 361 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 420
Query: 421 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIK 480
GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIK
Sbjct: 421 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIK 480
Query: 481 VAASHHPPDRPPDPFSTL 498
VAASHHPPDRPPDPFSTL
Sbjct: 481 VAASHHPPDRPPDPFSTL 498
>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
Length = 554
Score = 974 bits (2519), Expect = 0.0
Identities = 477/494 (96%), Positives = 478/494 (96%)
Query: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL
Sbjct: 46 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 105
Query: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL
Sbjct: 106 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 165
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA
Sbjct: 166 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 225
Query: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT
Sbjct: 226 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 285
Query: 241 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 300
GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS
Sbjct: 286 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 345
Query: 301 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 360
PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS
Sbjct: 346 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 405
Query: 361 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 420
PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN
Sbjct: 406 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 465
Query: 421 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIK 480
GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSP
Sbjct: 466 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPST 525
Query: 481 VAASHHPPDRPPDP 494
A+ P DP
Sbjct: 526 SPANRFVSVGPRDP 539
>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
Length = 509
Score = 974 bits (2519), Expect = 0.0
Identities = 477/494 (96%), Positives = 478/494 (96%)
Query: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL
Sbjct: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
Query: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL
Sbjct: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
Query: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT
Sbjct: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
Query: 241 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 300
GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS
Sbjct: 241 GPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS 300
Query: 301 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 360
PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS
Sbjct: 301 PGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRAS 360
Query: 361 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 420
PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN
Sbjct: 361 PHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPN 420
Query: 421 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIK 480
GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSP
Sbjct: 421 GSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPST 480
Query: 481 VAASHHPPDRPPDP 494
A+ P DP
Sbjct: 481 SPANRFVSVGPRDP 494
>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
Length = 501
Score = 955 bits (2469), Expect = 0.0
Identities = 468/485 (96%), Positives = 469/485 (96%)
Query: 10 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQ 69
DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQ
Sbjct: 2 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQ 61
Query: 70 KWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRL 129
KWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRL
Sbjct: 62 KWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRL 121
Query: 130 DLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSS 189
DLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSS
Sbjct: 122 DLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSS 181
Query: 190 QSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDL 249
QSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDL
Sbjct: 182 QSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDL 241
Query: 250 ESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSG 309
ESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSG
Sbjct: 242 ESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSG 301
Query: 310 WHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLH 369
WHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLH
Sbjct: 302 WHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLH 361
Query: 370 FPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHN 429
FPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHN
Sbjct: 362 FPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHN 421
Query: 430 PFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPD 489
PFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSP A+
Sbjct: 422 PFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSPANRFVSV 481
Query: 490 RPPDP 494
P DP
Sbjct: 482 GPRDP 486
>gi|56549649 nuclear factor I/X (CCAAT-binding transcription factor)
[Homo sapiens]
Length = 441
Score = 602 bits (1553), Expect = e-172
Identities = 311/422 (73%), Positives = 350/422 (82%), Gaps = 13/422 (3%)
Query: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
MYSP CLTQDEFHPFIEALLPHVRAF+YTWFNLQARKRKYFKKHEKRMSK+EERAVKDEL
Sbjct: 1 MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 60
Query: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
L EKPE+KQKWASRLLAKLRKDIRPE+REDFVLT+TGKKPPCCVLSNPDQKGK+RRIDCL
Sbjct: 61 LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL 120
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL KSPQCSNPGLCVQPHHIGV++KELDLYLA
Sbjct: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA 180
Query: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
YFVH +S QS+S +Q DADIK P NGHL FQD FVTSGV++VTELVRVSQTP+A +
Sbjct: 181 YFVHTPESGQSDSSNQQGDADIKPLP-NGHLSFQDCFVTSGVWNVTELVRVSQTPVATAS 239
Query: 241 GPNFSLSDLESSSYYSMSPGAM-RRSLPSTSSTSSTKRLKSVED-EMDSPGEEPFYTGQG 298
GPNFSL+DLES SYY+++ + RRS+ S STS+TKR KS++D EM+SP ++ FY G G
Sbjct: 240 GPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTG 299
Query: 299 RSPGSG-SQSSGW-HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITG 356
RSP +G SQSSGW ++V+ G P +LKKS K F S SQ SS AFT H PV+ G
Sbjct: 300 RSPAAGSSQSSGWPNDVDAG---PASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAG 356
Query: 357 PR-ASPHATPSTLHFPTSPIIQQPGPYFSHPAIRY---HPQETLKEFVQLVCPD-AGQQA 411
R SP AT S LHFP++ IIQQ PYF+HP IRY H Q++LKEFVQ VC D +GQ
Sbjct: 357 VRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQAT 416
Query: 412 GQ 413
GQ
Sbjct: 417 GQ 418
>gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens]
Length = 499
Score = 538 bits (1385), Expect = e-153
Identities = 306/500 (61%), Positives = 357/500 (71%), Gaps = 44/500 (8%)
Query: 10 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLSEKPEVKQ 69
DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSK+EERAVKDELL EKPEVKQ
Sbjct: 2 DEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEVKQ 61
Query: 70 KWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQADKVWRL 129
KWASRLLAKLRKDIRPE REDFVL++TGKK P CVLSNPDQKGKMRRIDCLRQADKVWRL
Sbjct: 62 KWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDCLRQADKVWRL 121
Query: 130 DLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYFVHAADSS 189
DLVMVILFKGIPLESTDGERLVK+ QC +P LCVQPHHIGV+VKELDLYLAYFV D+
Sbjct: 122 DLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYFVRERDAE 181
Query: 190 QSESPSQPSDADIKDQP--ENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLS 247
QS SP +D +D FQ+SFVTSGVFSVTEL++VS+TP+ GTGPNFSL
Sbjct: 182 QSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGTGPNFSLG 241
Query: 248 DLESSSYYSMSPGA--MRRSLPSTSSTSSTK-RLKSVEDEMDSPGEEPFYTGQGRSPGSG 304
+L+ Y ++P + +RR+LPSTSS+ S + + S+E+++D+ +YT SP S
Sbjct: 242 ELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYYT----SPSSP 297
Query: 305 SQSS-GWHE-VEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVI---TGPRA 359
+ SS W E +E G+ SP + +KS F+SPSP + L ++FTQHHRPVI +G
Sbjct: 298 TSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRL-SSFTQHHRPVIAVHSGIAR 356
Query: 360 SPHATPSTLHFPTSPII-QQPGPYFSHPAIRY----HPQETLKEFVQLVCPDAGQQAGQV 414
SPH + S LHFPT+ I+ Q YF H AIRY +PQ+ LK+ V L C A QQ G +
Sbjct: 357 SPHPS-SALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQPGPL 415
Query: 415 GFLNPNGSSQGKVHNPFLPTPMLPPPPP--PPMARPVPLPVPDTKPPTTSTEGGAASPTS 472
NGS Q K+ + L ML PPPP P +A P P TKP TTS EGGA SPTS
Sbjct: 416 -----NGSGQLKMPSHCLSAQMLAPPPPGLPRLALP-----PATKPATTS-EGGATSPTS 464
Query: 473 PILVPGIKVAASHHPPDRPP 492
P S+ PPD P
Sbjct: 465 P----------SYSPPDTSP 474
>gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens]
Length = 428
Score = 512 bits (1318), Expect = e-145
Identities = 278/430 (64%), Positives = 325/430 (75%), Gaps = 21/430 (4%)
Query: 3 SPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDELLS 62
SPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSK+EERAVKDELL
Sbjct: 4 SPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLG 63
Query: 63 EKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCLRQ 122
EKPEVKQKWASRLLAKLRKDIRPE REDFVL++TGKK P CVLSNPDQKGKMRRIDCLRQ
Sbjct: 64 EKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKGKMRRIDCLRQ 123
Query: 123 ADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLAYF 182
ADKVWRLDLVMVILFKGIPLESTDGERLVK+ QC +P LCVQPHHIGV+VKELDLYLAYF
Sbjct: 124 ADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYF 183
Query: 183 VHAADSSQSESPSQPSDADIKDQP--ENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
V D+ QS SP +D +D FQ+SFVTSGVFSVTEL++VS+TP+ GT
Sbjct: 184 VRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGT 243
Query: 241 GPNFSLSDLESSSYYSMSPGA--MRRSLPSTSSTSSTK-RLKSVEDEMDSPGEEPFYTGQ 297
GPNFSL +L+ Y ++P + +RR+LPSTSS+ S + + S+E+++D+ +YT
Sbjct: 244 GPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYYT-- 301
Query: 298 GRSPGSGSQSS-GWHE-VEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVI- 354
SP S + SS W E +E G+ SP + +KS F+SPSP + L ++FTQHHRPVI
Sbjct: 302 --SPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRL-SSFTQHHRPVIA 358
Query: 355 --TGPRASPHATPSTLHFPTSPII-QQPGPYFSHPAIRY----HPQETLKEFVQLVCPDA 407
+G SPH + S LHFPT+ I+ Q YF H AIRY +PQ+ LK+ V L C A
Sbjct: 359 VHSGIARSPHPS-SALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPA 417
Query: 408 GQQAGQVGFL 417
QQ G +L
Sbjct: 418 SQQPGPSWYL 427
>gi|93004092 nuclear factor I/B [Homo sapiens]
Length = 420
Score = 502 bits (1292), Expect = e-142
Identities = 274/421 (65%), Positives = 313/421 (74%), Gaps = 22/421 (5%)
Query: 1 MYSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKEEERAVKDEL 60
MYSP+CLTQDEFHPFIEALLPHVRA AYTWFNLQARKRKYFKKHEKRMSK+EERAVKDEL
Sbjct: 2 MYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL 61
Query: 61 LSEKPEVKQKWASRLLAKLRKDIRPEYREDFVLTVTGKKPPCCVLSNPDQKGKMRRIDCL 120
LSEKPE+KQKWASRLLAKLRKDIR EYREDFVLTVTGKK PCCVLSNPDQKGK+RRIDCL
Sbjct: 62 LSEKPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHPCCVLSNPDQKGKIRRIDCL 121
Query: 121 RQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCSNPGLCVQPHHIGVSVKELDLYLA 180
RQADKVWRLDLVMVILFKGIPLESTDGERL+KSP C+NP LCVQPHHI VSVKELDL+LA
Sbjct: 122 RQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNPALCVQPHHITVSVKELDLFLA 181
Query: 181 YFVHAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGT 240
Y+V DS QS SPS A K+ P G+L +DSFV SGVF+V+ELVRVS+TPI GT
Sbjct: 182 YYVQEQDSGQSGSPSHNDPA--KNPP--GYL--EDSFVKSGVFNVSELVRVSRTPITQGT 235
Query: 241 GPNFSLSDLESSSYY-SMSPGA-MRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQG 298
G NF + ++ S YY M+ G ++RSL S S+ K + S+++ M+ FY
Sbjct: 236 GVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTI-SIDENMEPSPTGDFYPSPS 294
Query: 299 RSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPR 358
SP +GS++ WHE + M SPTT+KK EK FSS SP +S + F QHH P I G
Sbjct: 295 -SPAAGSRT--WHERDQDMSSPTTMKKPEKPLFSSASPQDSSPRLSTFPQHHHPGIPGVA 351
Query: 359 ASPHAT-----PSTLHFPTSPII-QQPGPYFSHPAIRY----HPQETLKEFVQLVCPDAG 408
S +T PS L FPT I+ P YFSHP IRY +PQ+TLK +V P +
Sbjct: 352 HSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPHLNPQDTLKNYVPSYDPSSP 411
Query: 409 Q 409
Q
Sbjct: 412 Q 412
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 58.5 bits (140), Expect = 1e-08
Identities = 98/369 (26%), Positives = 131/369 (35%), Gaps = 29/369 (7%)
Query: 141 PLESTDGERLVKSPQCSNPGLCVQPHHIGVSV----KELDLYLAYFVHAADSSQSESPSQ 196
P + G SP +PG + P + S + Y + +S S SP+
Sbjct: 1567 PTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTS 1626
Query: 197 PSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLSDLESSSYYS 256
PS + + TS +S T +P + T P++S + S SY
Sbjct: 1627 PSYSPTSPNYSPTSPSYSP---TSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSP 1680
Query: 257 MSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPG 316
SP S PS S TS + S SP P T SP S S S P
Sbjct: 1681 TSPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP--TSPSYSPTSPSYSPTSPSYSPT 1737
Query: 317 MPS--PTTLKKSEKSGF---SSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFP 371
PS PT+ S S +SPS S TS + + ++ P T P SP +PS + P
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTP--TSPNYSP-TSPS--YSP 1792
Query: 372 TSPIIQQPGPYFSHPAIRYHPQE-TLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNP 430
TSP P +S + RY PQ T P + + P S
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPE 1852
Query: 431 FLPTPMLPPPPPPPMARPVPL--PVPDTKPPTT---STEGGAASPTSPILVPGIKVAASH 485
+ PT P P + P P T PTT S SPTSP+ P +
Sbjct: 1853 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1912
Query: 486 HPPDRPPDP 494
P P P
Sbjct: 1913 SPTYSPTSP 1921
Score = 53.5 bits (127), Expect = 4e-07
Identities = 84/307 (27%), Positives = 107/307 (34%), Gaps = 37/307 (12%)
Query: 188 SSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLS 247
+S S SP+ PS + + TS +S T +P + T PN+S +
Sbjct: 1695 TSPSYSPTSPSYSPTSPSYSPTSPSYSP---TSPSYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 248 DLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQS 307
S +Y SP S PS S TS S SP P T SP S S S
Sbjct: 1752 ---SPNYTPTSPSYSPTS-PSYSPTSPNYTPTSPNYSPTSPSYSP--TSPSYSPTSPSYS 1805
Query: 308 SGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPST 367
P SPT S SSPS S TS T + + P +SP TP++
Sbjct: 1806 PSSPRYTP--QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP------SSPEYTPTS 1857
Query: 368 LHF-PTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGK 426
+ PTSP P +S + Y P + +P S
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTP-----------------KYSPTSPTYSPTSP 1900
Query: 427 VHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHH 486
V+ P P P P P P T PT S +G SPTSP P +
Sbjct: 1901 VYTPTSPK-YSPTSPTYSPTSPKYSPTSPTYSPT-SPKGSTYSPTSPGYSPTSPTYSLTS 1958
Query: 487 PPDRPPD 493
P P D
Sbjct: 1959 PAISPDD 1965
Score = 49.7 bits (117), Expect = 6e-06
Identities = 80/314 (25%), Positives = 110/314 (35%), Gaps = 27/314 (8%)
Query: 188 SSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPNFSLS 247
+S S SP+ PS + + TS +S T +P + T P++S +
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSP---TSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1716
Query: 248 DLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQS 307
S SY SP S PS S TS + S SP P T SP S S S
Sbjct: 1717 ---SPSYSPTSPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYTP--TSPSYSPTSPSYS 1770
Query: 308 SGWHEVEPGMP--SPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATP 365
P P SPT+ S S SP+ S +T P T P + ++
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS-PTYT-PSSPSYSPS 1828
Query: 366 STLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQG 425
S + PTSP P +S + Y P P + + +P S
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTS----------PKYSPTSPKYSPTSPKYSPTS 1878
Query: 426 KVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAA---SPTSPILVPGIKVA 482
++P P P P PV P PT+ T + SPTSP P
Sbjct: 1879 PTYSPTTPK-YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 1937
Query: 483 ASHHPPDRPPDPFS 496
+++ P P S
Sbjct: 1938 STYSPTSPGYSPTS 1951
Score = 43.1 bits (100), Expect = 6e-04
Identities = 66/265 (24%), Positives = 92/265 (34%), Gaps = 43/265 (16%)
Query: 232 SQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEE 291
+ TP G P + S M+PGA S PS +S +S SPG
Sbjct: 1516 AMTPWNQGATPAYGAWSPSVGS--GMTPGAAGFS-PSAASDASGF----------SPGYS 1562
Query: 292 PFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHR 351
P ++ SPGS SS P +PSP G SPS S TS +
Sbjct: 1563 PAWSPTPGSPGSPGPSS------PYIPSP--------GGAMSPSYSPTSPA----YEPRS 1604
Query: 352 PVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQA 411
P P++ ++ S + PTSP P +S + Y P P +
Sbjct: 1605 PGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP----------TSPSYSPTS 1654
Query: 412 GQVGFLNPNGSSQGKVHNPFLP--TPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAAS 469
+P+ S ++P P +P P P + P P+ S + S
Sbjct: 1655 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 470 PTSPILVPGIKVAASHHPPDRPPDP 494
PTSP P + P P P
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSP 1739
Score = 39.7 bits (91), Expect = 0.006
Identities = 54/197 (27%), Positives = 75/197 (38%), Gaps = 23/197 (11%)
Query: 219 TSGVFSVTELVRVSQTPIAAGTGPNFSLSD---LESSSYYSMSPGAMRRSLPSTSSTSST 275
TS +S T +P + T P++S S S Y+ S + S PS S TS
Sbjct: 1779 TSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPK 1838
Query: 276 KRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMP--SPTTLKKSEKSGFSS 333
S SP P T SP S S + P P SPTT K S +S
Sbjct: 1839 YTPTSPSYSPSSPEYTP--TSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSP----TS 1892
Query: 334 PSPSQTSSLGTAFTQHHRPVI------------TGPRASPHATPSTLHFPTSPIIQQPGP 381
P+ S TS + T + + P T P SP + + + PTSP P
Sbjct: 1893 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
Query: 382 YFSHPAIRYHPQETLKE 398
+S + P ++ +E
Sbjct: 1953 TYSLTSPAISPDDSDEE 1969
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 57.0 bits (136), Expect = 4e-08
Identities = 73/280 (26%), Positives = 102/280 (36%), Gaps = 36/280 (12%)
Query: 232 SQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRR-SLPSTSSTSSTKRLKSVEDEMDSPGE 290
S P GP S+S S SP A RR S +++ L S + SP
Sbjct: 195 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 254
Query: 291 E-PFYTGQGRSPGSGSQSS--GWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFT 347
P G R+P SQ G + P +P + G S SP T S A
Sbjct: 255 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQ 314
Query: 348 QHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDA 407
P + A+PH++ T T + P P + P+++ P P A
Sbjct: 315 SQAPPTLP---ATPHSSSLTCQLATPLPLAPPSPS-APPSLQTLPS-----------PPA 359
Query: 408 GQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGA 467
+ L GS + + FLP+P L P PP P L +P + P + A
Sbjct: 360 TPPSQATTSL---GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPP---A 413
Query: 468 ASPTSPILVPGIK---------VAASHHPPDRPP--DPFS 496
+ P SP+ P + + A PP PP PFS
Sbjct: 414 SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 453
Score = 39.7 bits (91), Expect = 0.006
Identities = 71/282 (25%), Positives = 105/282 (37%), Gaps = 55/282 (19%)
Query: 258 SPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGM 317
SP A S +TS S T L++ + SP P T ++P + + + P
Sbjct: 356 SPPATPPSQATTSLGSPT--LQATHSFLPSPPLSPLATPPPQAPPALA-------LPPLQ 406
Query: 318 PSPTTLKKSEKSGFSSPSPSQTSSLGT-----AFTQHHRPVI-------TGPRASPHATP 365
P+ S ++PSP ++L F+ P + P SP ATP
Sbjct: 407 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 466
Query: 366 ST----------LHFPTSPIIQQP------GPYFSHPAIRYHPQETLKEFVQLVCPDAGQ 409
+ L P SP P P + P + P + K Q P A
Sbjct: 467 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ--APPALA 524
Query: 410 QAGQVGFLNPNGSSQGKVHNPFLPTPMLP------PPP--PPPMARPVPLPVPDTKPPTT 461
+P S G+ PF P+ LP PPP PP +A P+ L VP + P +
Sbjct: 525 TPPLQALPSPPASFPGQA--PFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPSPPASP 581
Query: 462 STEGGAASPT----SPILVPGIKVAASHHPPDRPP-DPFSTL 498
+ + PT + + P + +A + PP P P STL
Sbjct: 582 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 623
Score = 33.5 bits (75), Expect = 0.46
Identities = 54/231 (23%), Positives = 76/231 (32%), Gaps = 53/231 (22%)
Query: 300 SPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPR- 358
S G+ +SG PG PSP ++S +G P S RP GPR
Sbjct: 157 SAGARRDTSG---PTPGTPSPAMARRSRAAGTEVGLPRPAPS------ARPRPPTEGPRK 207
Query: 359 ----ASPHAT----------PST---LHFPTSPIIQQPGPYFSHPA-----------IRY 390
AS H+T PS L P S + S PA
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA 267
Query: 391 HPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP 450
HP + + +Q + P + P P +P+ P P + P
Sbjct: 268 HPSQPKPKGLQALRPPQ---------VTPPRKDAAPALGPLSSSPLATPSPSAALQSQAP 318
Query: 451 LPVPDTKPPTTSTEGGAA----SPTSPILVPGIKVAASHHPPDRPPDPFST 497
+P T ++ T A +P SP P ++ S PP PP +T
Sbjct: 319 PTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS--PPATPPSQATT 367
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 53.1 bits (126), Expect = 6e-07
Identities = 78/307 (25%), Positives = 106/307 (34%), Gaps = 67/307 (21%)
Query: 232 SQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRR-SLPSTSSTSSTKRLKSVEDEMDSPGE 290
S P GP S+S S SP A RR S +++ L S + SP
Sbjct: 186 SARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245
Query: 291 E-PFYTGQGRSPGSGSQSS--GWHEVEPGMPSPT------TLKKSEKSGFSSPSPSQ--- 338
P G R+P SQ G + P +P L S ++PSPS
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPS 305
Query: 339 ---------------------TSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQ 377
T+SLG+ Q + P SP ATP P +P
Sbjct: 306 PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP----PQAP--- 358
Query: 378 QPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPML 437
P + P ++ P P A + +P + VH L P
Sbjct: 359 ---PALALPPLQAPPS-----------PPASPPLSPLATPSPQAPNALAVH--LLQAPFS 402
Query: 438 PPPPPP---PMARPVPLPV-PDTKPPTTSTEGGAAS----PTSPILVPGIKVAASHHPPD 489
PPP PP P + P PV P PP+ + AA P SP P + +A+ PP
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT--PPP 460
Query: 490 RPPDPFS 496
+ P P +
Sbjct: 461 QAPPPLA 467
Score = 47.8 bits (112), Expect = 2e-05
Identities = 71/281 (25%), Positives = 99/281 (35%), Gaps = 40/281 (14%)
Query: 250 ESSSYYSMSPGAMRRS---LPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQ 306
E+ ++S GA R + P T S + +R ++ E+ P P + + G
Sbjct: 140 EAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKS 199
Query: 307 SSGWHEVEPGMPSPTTLKK-SEKSGFSSPSPSQTSSLGTAFTQHHR--PVITG-PRASPH 362
S E PSP ++ S G P+ SS T + R P G PRA H
Sbjct: 200 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 259
Query: 363 AT---PSTLHFPTSPIIQQP--------GPYFSHPAIRYHPQ-----ETLKEFVQLVCPD 406
+ P L P + P GP S P P L P
Sbjct: 260 PSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPP 319
Query: 407 AGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGG 466
A + L GS + + FLP+P L P PP P L +P + P +
Sbjct: 320 ATPPSQATTSL---GSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPP--- 373
Query: 467 AASPTSPILVPGIK---------VAASHHPPDRPP--DPFS 496
A+ P SP+ P + + A PP PP PFS
Sbjct: 374 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 414
Score = 39.7 bits (91), Expect = 0.006
Identities = 71/282 (25%), Positives = 105/282 (37%), Gaps = 55/282 (19%)
Query: 258 SPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPGM 317
SP A S +TS S T L++ + SP P T ++P + + + P
Sbjct: 317 SPPATPPSQATTSLGSPT--LQATHSFLPSPPLSPLATPPPQAPPALA-------LPPLQ 367
Query: 318 PSPTTLKKSEKSGFSSPSPSQTSSLGT-----AFTQHHRPVI-------TGPRASPHATP 365
P+ S ++PSP ++L F+ P + P SP ATP
Sbjct: 368 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 427
Query: 366 ST----------LHFPTSPIIQQP------GPYFSHPAIRYHPQETLKEFVQLVCPDAGQ 409
+ L P SP P P + P + P + K Q P A
Sbjct: 428 PSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ--APPALA 485
Query: 410 QAGQVGFLNPNGSSQGKVHNPFLPTPMLP------PPP--PPPMARPVPLPVPDTKPPTT 461
+P S G+ PF P+ LP PPP PP +A P+ L VP + P +
Sbjct: 486 TPPLQALPSPPASFPGQA--PFSPSASLPMSPLATPPPQAPPVLAAPL-LQVPPSPPASP 542
Query: 462 STEGGAASPT----SPILVPGIKVAASHHPPDRPP-DPFSTL 498
+ + PT + + P + +A + PP P P STL
Sbjct: 543 TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 584
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 52.0 bits (123), Expect = 1e-06
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 18/161 (11%)
Query: 334 PSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQ 393
PS TSSL + T P + P P P P Q P HPA P
Sbjct: 332 PSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPA----PP 387
Query: 394 ETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPV 453
VQ P + A + + QG+V LPPPPPPP PLP
Sbjct: 388 PIAPPLVQ-PSPPVARAAPVCETVPVHPLPQGEVQG-------LPPPPPPP-----PLPP 434
Query: 454 PDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P +P + T A P S L P A H P PP P
Sbjct: 435 PGIRPSSPVTVTALAHPPSG-LHPTPSTAPGPHVPLMPPSP 474
Score = 36.2 bits (82), Expect = 0.071
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 415 GFLNPNGSSQGKVHNPFLPTPMLPPPPPP------------PMARPVPLPVPDTKPPTTS 462
G + S P +P PPPPPP M P PVP PP +
Sbjct: 302 GLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPAT 361
Query: 463 TEGGAASPTSPI---LVPGIKVAASHHPPDRPP 492
A P P + PG+ A PP PP
Sbjct: 362 ALQAPAVPPPPAPLQIAPGVLHPAP--PPIAPP 392
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 433 PTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPP 492
P + P PPPPP P L + TST P P+ P A + P PP
Sbjct: 317 PVFVSPTPPPPPPPLPSALSTSSLRASMTST------PPPPVPPPPPPPATALQAPAVPP 370
Query: 493 DP 494
P
Sbjct: 371 PP 372
Score = 30.4 bits (67), Expect = 3.9
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 23/79 (29%)
Query: 439 PPPPPPM-----ARPVPLPVPDT--------KPPTTSTEGGAASPTSPILVPGIKVA--- 482
PPPPPPM A+P+P + + P T SPT P P + A
Sbjct: 278 PPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALST 337
Query: 483 -------ASHHPPDRPPDP 494
S PP PP P
Sbjct: 338 SSLRASMTSTPPPPVPPPP 356
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 52.0 bits (123), Expect = 1e-06
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 18/161 (11%)
Query: 334 PSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQ 393
PS TSSL + T P + P P P P Q P HPA P
Sbjct: 332 PSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPA----PP 387
Query: 394 ETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPV 453
VQ P + A + + QG+V LPPPPPPP PLP
Sbjct: 388 PIAPPLVQ-PSPPVARAAPVCETVPVHPLPQGEVQG-------LPPPPPPP-----PLPP 434
Query: 454 PDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P +P + T A P S L P A H P PP P
Sbjct: 435 PGIRPSSPVTVTALAHPPSG-LHPTPSTAPGPHVPLMPPSP 474
Score = 36.2 bits (82), Expect = 0.071
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 415 GFLNPNGSSQGKVHNPFLPTPMLPPPPPP------------PMARPVPLPVPDTKPPTTS 462
G + S P +P PPPPPP M P PVP PP +
Sbjct: 302 GLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPAT 361
Query: 463 TEGGAASPTSPI---LVPGIKVAASHHPPDRPP 492
A P P + PG+ A PP PP
Sbjct: 362 ALQAPAVPPPPAPLQIAPGVLHPAP--PPIAPP 392
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 433 PTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPP 492
P + P PPPPP P L + TST P P+ P A + P PP
Sbjct: 317 PVFVSPTPPPPPPPLPSALSTSSLRASMTST------PPPPVPPPPPPPATALQAPAVPP 370
Query: 493 DP 494
P
Sbjct: 371 PP 372
Score = 30.4 bits (67), Expect = 3.9
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 23/79 (29%)
Query: 439 PPPPPPM-----ARPVPLPVPDT--------KPPTTSTEGGAASPTSPILVPGIKVA--- 482
PPPPPPM A+P+P + + P T SPT P P + A
Sbjct: 278 PPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALST 337
Query: 483 -------ASHHPPDRPPDP 494
S PP PP P
Sbjct: 338 SSLRASMTSTPPPPVPPPP 356
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 52.0 bits (123), Expect = 1e-06
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 18/161 (11%)
Query: 334 PSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQ 393
PS TSSL + T P + P P P P Q P HPA P
Sbjct: 332 PSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPA----PP 387
Query: 394 ETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPV 453
VQ P + A + + QG+V LPPPPPPP PLP
Sbjct: 388 PIAPPLVQ-PSPPVARAAPVCETVPVHPLPQGEVQG-------LPPPPPPP-----PLPP 434
Query: 454 PDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P +P + T A P S L P A H P PP P
Sbjct: 435 PGIRPSSPVTVTALAHPPSG-LHPTPSTAPGPHVPLMPPSP 474
Score = 36.2 bits (82), Expect = 0.071
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 415 GFLNPNGSSQGKVHNPFLPTPMLPPPPPP------------PMARPVPLPVPDTKPPTTS 462
G + S P +P PPPPPP M P PVP PP +
Sbjct: 302 GLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPAT 361
Query: 463 TEGGAASPTSPI---LVPGIKVAASHHPPDRPP 492
A P P + PG+ A PP PP
Sbjct: 362 ALQAPAVPPPPAPLQIAPGVLHPAP--PPIAPP 392
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 433 PTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPP 492
P + P PPPPP P L + TST P P+ P A + P PP
Sbjct: 317 PVFVSPTPPPPPPPLPSALSTSSLRASMTST------PPPPVPPPPPPPATALQAPAVPP 370
Query: 493 DP 494
P
Sbjct: 371 PP 372
Score = 30.4 bits (67), Expect = 3.9
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 23/79 (29%)
Query: 439 PPPPPPM-----ARPVPLPVPDT--------KPPTTSTEGGAASPTSPILVPGIKVA--- 482
PPPPPPM A+P+P + + P T SPT P P + A
Sbjct: 278 PPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALST 337
Query: 483 -------ASHHPPDRPPDP 494
S PP PP P
Sbjct: 338 SSLRASMTSTPPPPVPPPP 356
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 52.0 bits (123), Expect = 1e-06
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 18/161 (11%)
Query: 334 PSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQ 393
PS TSSL + T P + P P P P Q P HPA P
Sbjct: 332 PSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPA----PP 387
Query: 394 ETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPV 453
VQ P + A + + QG+V LPPPPPPP PLP
Sbjct: 388 PIAPPLVQ-PSPPVARAAPVCETVPVHPLPQGEVQG-------LPPPPPPP-----PLPP 434
Query: 454 PDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P +P + T A P S L P A H P PP P
Sbjct: 435 PGIRPSSPVTVTALAHPPSG-LHPTPSTAPGPHVPLMPPSP 474
Score = 36.2 bits (82), Expect = 0.071
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 17/93 (18%)
Query: 415 GFLNPNGSSQGKVHNPFLPTPMLPPPPPP------------PMARPVPLPVPDTKPPTTS 462
G + S P +P PPPPPP M P PVP PP +
Sbjct: 302 GLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPAT 361
Query: 463 TEGGAASPTSPI---LVPGIKVAASHHPPDRPP 492
A P P + PG+ A PP PP
Sbjct: 362 ALQAPAVPPPPAPLQIAPGVLHPAP--PPIAPP 392
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 433 PTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPP 492
P + P PPPPP P L + TST P P+ P A + P PP
Sbjct: 317 PVFVSPTPPPPPPPLPSALSTSSLRASMTST------PPPPVPPPPPPPATALQAPAVPP 370
Query: 493 DP 494
P
Sbjct: 371 PP 372
Score = 30.4 bits (67), Expect = 3.9
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 23/79 (29%)
Query: 439 PPPPPPM-----ARPVPLPVPDT--------KPPTTSTEGGAASPTSPILVPGIKVA--- 482
PPPPPPM A+P+P + + P T SPT P P + A
Sbjct: 278 PPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALST 337
Query: 483 -------ASHHPPDRPPDP 494
S PP PP P
Sbjct: 338 SSLRASMTSTPPPPVPPPP 356
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 1e-06
Identities = 56/229 (24%), Positives = 76/229 (33%), Gaps = 22/229 (9%)
Query: 288 PGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFT 347
P P G+ P G +S MP P S+ P PS + ++
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 348 QHHRPVITGPRASPHATPSTLHFPTS--------PIIQQP----GPYFSHPAIRYHPQET 395
P + G P P+ FP + I Q P P+ + P + P
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 396 LKEFVQLVCPDAGQQAG-QVGFLNPNGSSQGKVHNPFLPTPMLP---PPPPPPMARPVPL 451
L + P G + + P K P P P PPPPPP +RP P
Sbjct: 260 LDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 452 PVP------DTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P+P D P +S T P+ PG P +RPP P
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Score = 33.9 bits (76), Expect = 0.35
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 35/223 (15%)
Query: 288 PGEEPFYTGQGRSPGSGS-------QSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTS 340
P PF +G + G GS SS + P P+P+ + P ++ S
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPS 276
Query: 341 SLGTAFT----QHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETL 396
A Q+++P + ++P + S+ P P +PGP P+ + +
Sbjct: 277 IHREAVPPPPPQNNKPPVP---STPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET-- 331
Query: 397 KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPP----PPMARPVPLP 452
P Q+ + P S G+ P P P PPPP P + P+P P
Sbjct: 332 --------PRLPQRNLSLSSSTPPLPSPGR-SGPLPPPPSERPPPPVRDPPGRSGPLPPP 382
Query: 453 VPDTKPPTTSTEGGAASPTSPILV--PGIKVAASHHPPDRPPD 493
P ++ +TS A P +P L G+ S P PPD
Sbjct: 383 PPVSRNGSTS----RALPATPQLPSRSGVDSPRSGPRPPLPPD 421
Score = 30.4 bits (67), Expect = 3.9
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 26/153 (16%)
Query: 315 PGMPSPTTLKKSEKSGFSSPS-PSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTS 373
P P P L S +P P + SL ++ P + P S P P
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS-----TPPLPSPGRSGPLPPPPSERPPP 367
Query: 374 PIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLP 433
P+ PG P P + P Q + G +P P
Sbjct: 368 PVRDPPGRSGPLPP---PPPVSRNGSTSRALPATPQLPSRSGVDSPRSG----------P 414
Query: 434 TPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGG 466
P LPP P A P P PP+TS G
Sbjct: 415 RPPLPPDRPSAGAPPPP-------PPSTSIRNG 440
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 52.0 bits (123), Expect = 1e-06
Identities = 56/229 (24%), Positives = 76/229 (33%), Gaps = 22/229 (9%)
Query: 288 PGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFT 347
P P G+ P G +S MP P S+ P PS + ++
Sbjct: 140 PFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 348 QHHRPVITGPRASPHATPSTLHFPTS--------PIIQQP----GPYFSHPAIRYHPQET 395
P + G P P+ FP + I Q P P+ + P + P
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA 259
Query: 396 LKEFVQLVCPDAGQQAG-QVGFLNPNGSSQGKVHNPFLPTPMLP---PPPPPPMARPVPL 451
L + P G + + P K P P P PPPPPP +RP P
Sbjct: 260 LDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 452 PVP------DTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDP 494
P+P D P +S T P+ PG P +RPP P
Sbjct: 320 PLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Score = 33.9 bits (76), Expect = 0.35
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 35/223 (15%)
Query: 288 PGEEPFYTGQGRSPGSGS-------QSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTS 340
P PF +G + G GS SS + P P+P+ + P ++ S
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPS 276
Query: 341 SLGTAFT----QHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETL 396
A Q+++P + ++P + S+ P P +PGP P+ + +
Sbjct: 277 IHREAVPPPPPQNNKPPVP---STPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDET-- 331
Query: 397 KEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPP----PPMARPVPLP 452
P Q+ + P S G+ P P P PPPP P + P+P P
Sbjct: 332 --------PRLPQRNLSLSSSTPPLPSPGR-SGPLPPPPSERPPPPVRDPPGRSGPLPPP 382
Query: 453 VPDTKPPTTSTEGGAASPTSPILV--PGIKVAASHHPPDRPPD 493
P ++ +TS A P +P L G+ S P PPD
Sbjct: 383 PPVSRNGSTS----RALPATPQLPSRSGVDSPRSGPRPPLPPD 421
Score = 30.4 bits (67), Expect = 3.9
Identities = 37/153 (24%), Positives = 47/153 (30%), Gaps = 26/153 (16%)
Query: 315 PGMPSPTTLKKSEKSGFSSPS-PSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTS 373
P P P L S +P P + SL ++ P + P S P P
Sbjct: 313 PSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS-----TPPLPSPGRSGPLPPPPSERPPP 367
Query: 374 PIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLP 433
P+ PG P P + P Q + G +P P
Sbjct: 368 PVRDPPGRSGPLPP---PPPVSRNGSTSRALPATPQLPSRSGVDSPRSG----------P 414
Query: 434 TPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGG 466
P LPP P A P P PP+TS G
Sbjct: 415 RPPLPPDRPSAGAPPPP-------PPSTSIRNG 440
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 50.4 bits (119), Expect = 4e-06
Identities = 62/266 (23%), Positives = 95/266 (35%), Gaps = 28/266 (10%)
Query: 240 TGPNFSLSDLESSSYYSMSPGAMRRSLPS-----TSSTSSTKRLKSVEDEMDSPGEEPFY 294
T P+F+LS +SS +++P LP+ TS S+ + S+ + E
Sbjct: 1065 TSPDFALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTT 1124
Query: 295 TGQGRSPGSGSQSSGWHEVEPG-MPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPV 353
+P S + S +P P PTT + +P ++L T H P
Sbjct: 1125 PDLDTTPYSSTVSEYSRSPDPSPSPHPTTTPDP------TMAPDPITTLNPTVTPHF-PT 1177
Query: 354 ITGPRASPHATPST--LHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQA 411
P +PH T T P QP +H + P T + F +
Sbjct: 1178 TPHPTTTPHPTTITHSTMIPDPTTTPQPFTTITHSTMIPDPTTTPQPFTTMQPTTTPHST 1237
Query: 412 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPT 471
P+ ++ H+ +P P P P M +P +P P T P T+T +P
Sbjct: 1238 TPHPTTTPHPTTI--THSTMIPDPTTTPQPFTTM-QPTTMPHPTTTPHPTTTPHPTTTP- 1293
Query: 472 SPILVPGIKVAASHHPPDRPPDPFST 497
P P P PDP +T
Sbjct: 1294 HPTTTP---------HPTMTPDPTTT 1310
Score = 35.8 bits (81), Expect = 0.093
Identities = 46/190 (24%), Positives = 66/190 (34%), Gaps = 35/190 (18%)
Query: 318 PSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQ 377
P PTT + + +P T++ T H P P ++P T T+ PTS +
Sbjct: 1293 PHPTTTPHPTMTPDPTTTPYPTTTPDPTTTPH--PTTPDPSSTPVIT--TVSLPTSLGTE 1348
Query: 378 QPGPYFSHPAIR--YHPQETLKEFVQLVCPDAGQQAGQVGFL--------NPNGSSQGKV 427
P + P ++ HPQ T P Q+ L +P+ SS
Sbjct: 1349 LSSPTLA-PTVKPSLHPQLTF------TAPAPHTSTSQIPTLEPSPALESSPSRSSTATS 1401
Query: 428 HNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHP 487
+P PP P P P P + T + SPT+ HP
Sbjct: 1402 MDPLSTEDFKPPRSQSPNLTPPPTHTPHSASDLTVSPDPLLSPTA-------------HP 1448
Query: 488 PDRPP-DPFS 496
D PP DP +
Sbjct: 1449 LDHPPLDPLT 1458
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 49.3 bits (116), Expect = 8e-06
Identities = 52/169 (30%), Positives = 66/169 (39%), Gaps = 19/169 (11%)
Query: 300 SPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRA 359
SP S G H P +P P + S SP PS+T T HH P G +
Sbjct: 805 SPIMPPGSQGSHIHCPQLPQPALHQNSP-----SPVPSRTP------TPHHTPPSIGAQQ 853
Query: 360 SPHATPSTLHFPTSPIIQQPGPYFS--HPAIRYHPQETLKEFVQLVCPD--AGQQAGQVG 415
P AT PT P + PGP HP R P + Q V P A A Q
Sbjct: 854 PP-ATTIPAPVPTPPAMP-PGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAPSADQPQ 911
Query: 416 FLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARP-VPLPVPDTKPPTTST 463
P P P+LPP P P+++P V + + PP+TS+
Sbjct: 912 -QQPRSQQSTAASVPTPTAPLLPPQPATPLSQPAVSIEGQVSNPPSTSS 959
Score = 48.1 bits (113), Expect = 2e-05
Identities = 59/227 (25%), Positives = 86/227 (37%), Gaps = 34/227 (14%)
Query: 291 EPFYTGQGRSPG-SGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPS--PSQTSSLGTAFT 347
+P T G P S + S +++ P + + L + + + P P QT L
Sbjct: 679 QPGMTSNGPLPDPSMIRGSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPL----- 733
Query: 348 QHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDA 407
QHH G A P A + + P +QQP P + + + P +
Sbjct: 734 QHH-----GQLAQPGALNPPMGY--GPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSS 786
Query: 408 GQQAGQVGFLN-----------PNGSSQGKVHNPFLPTPMLPP--PPPPPMARPVPLPVP 454
GQ ++ P GS +H P LP P L P P P P P P
Sbjct: 787 GQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTP 846
Query: 455 DT----KPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDPFST 497
+ +PP T+ A PT P + PG + A H PP + P P +T
Sbjct: 847 PSIGAQQPPATTIP--APVPTPPAMPPGPQSQALHPPPRQTPTPPTT 891
Score = 32.7 bits (73), Expect = 0.78
Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
Query: 353 VITGPRASPHATPSTLHFPTSPIIQQPG-PYFSHPAIRYHPQETLKEFVQLVCPDAGQQA 411
V+ + P TP+T PT+P QQP P P + PQ T + P Q A
Sbjct: 1840 VVGQQQGLPSPTPAT---PTTPTGQQPTTPQTPQPTSQ--PQPTPPNSMPPYLPRT-QAA 1893
Query: 412 GQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMA 446
G V G + G+V P P PP P PP A
Sbjct: 1894 GPVS----QGKAAGQVTPPTPPQTAQPPLPGPPPA 1924
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 48.5 bits (114), Expect = 1e-05
Identities = 68/244 (27%), Positives = 88/244 (36%), Gaps = 62/244 (25%)
Query: 267 PSTSSTSSTKRLKSVEDEMDSP----GEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTT 322
P +S S RL ++D+ +P +PF+ G P S P P P T
Sbjct: 432 PVPNSFSQPPRLP-LQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPT 490
Query: 323 LKKSEKSGFSSPSPSQT----SSLGTAFTQH-HRPVITGPRASPHATPSTLHFPTSPIIQ 377
L S S P P+Q+ + G AF Q +PV R P P +Q
Sbjct: 491 LLNS-----SHPVPTQSPLPFTQPGPAFNQQGQQPVFPRER------------PVRPALQ 533
Query: 378 QPGP----YFSHPAIRYHPQETLKEFV---QLVCPDAGQQAGQVGFL--NPNGSSQGKVH 428
PGP +FS P T + F+ Q P GQ FL + + QG +H
Sbjct: 534 PPGPVGILHFSQPG-----SATTRPFIPPRQPFLPGPGQP-----FLPTHTQPNLQGPLH 583
Query: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPP 488
P LPPP P +P P P +PP P P P HPP
Sbjct: 584 PP------LPPPHQPQPQQPQQQPPPQHQPP-------HQPPHQP---PPQHQPPPQHPP 627
Query: 489 DRPP 492
PP
Sbjct: 628 QHPP 631
Score = 36.6 bits (83), Expect = 0.054
Identities = 48/160 (30%), Positives = 60/160 (37%), Gaps = 27/160 (16%)
Query: 343 GTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQ--PGPY---FSHPAIRYHPQETLK 397
GT T P++ P + P FP P Q PGP FS P P+ L+
Sbjct: 393 GTVVTPVQVPLLPVP-SQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQP-----PRLPLQ 446
Query: 398 EFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPP----MARPVPL-- 451
+ Q P Q FL +G + H FL PPPPPPP + PVP
Sbjct: 447 D--QWRAPPPPQDRDPF-FLGVSGEPRFPSHL-FLEQRSPPPPPPPPTLLNSSHPVPTQS 502
Query: 452 PVPDTKPPTTSTEGG------AASPTSPILVPGIKVAASH 485
P+P T+P + G P P L P V H
Sbjct: 503 PLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGILH 542
Score = 29.6 bits (65), Expect = 6.6
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 31/111 (27%)
Query: 385 HPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKV--HNP-FLPT-----PM 436
H RY + + L+C G Q + + +G++ H P LPT P
Sbjct: 266 HKQGRYSSRRGGRRGGPLMCRGVGDQRRE-------STERGRMKDHRPALLPTQPPVVPQ 318
Query: 437 LPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHP 487
PPPPPPP P P+ P P P+L V HHP
Sbjct: 319 APPPPPPP---PQQQPIRSLFQP---------QPLQPLL----PVQHPHHP 353
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 48.5 bits (114), Expect = 1e-05
Identities = 74/292 (25%), Positives = 102/292 (34%), Gaps = 57/292 (19%)
Query: 225 VTELVRVS--QTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVE 282
+ E +R S +P AA T N S ++ S + A S P S+ +++ S
Sbjct: 48 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA---SSPLKSNKRQREKVASDT 104
Query: 283 DEMDSPGEEPFYTGQGRSPGSGSQSSGWHEV-----EPGMPSPTTLKKSEKSGFSS-PSP 336
+E D + T + P S S+ G + G P + + +S S PSP
Sbjct: 105 EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSP 164
Query: 337 SQT-----SSLGTAFTQHHRPVI---TGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAI 388
SS Q P + TG +P + P P +P + PGP S A+
Sbjct: 165 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAP-----PGTPQLPTPGPTPSATAV 219
Query: 389 RYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARP 448
PQ + P A Q Q P + H P L P PP P
Sbjct: 220 P--PQGS---------PTASQAPNQ-----PQAPTAPVPHTHIQQAPALHPQRPPS---P 260
Query: 449 VPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPP----DRPPDPFS 496
P P P PP G A P++P SH P PP P S
Sbjct: 261 HPPPHPSPHPPLQPLTGSAGQPSAP----------SHAQPPLHGQGPPGPHS 302
Score = 44.7 bits (104), Expect = 2e-04
Identities = 69/283 (24%), Positives = 90/283 (31%), Gaps = 35/283 (12%)
Query: 242 PNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSP 301
P + SD +SS+ M T T + ++ +PG P T P
Sbjct: 164 PQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV---P 220
Query: 302 GSGSQSSGWHEVEPGMPS-----------PTTLKKSEKSGFSSPSPSQTSSL----GTAF 346
GS ++ +P P+ P + S P PS L G+A
Sbjct: 221 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA- 279
Query: 347 TQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY--FSHPAIRYHPQETLKEFVQLVC 404
Q P P P P++Q PGP F P Q L
Sbjct: 280 GQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAY 339
Query: 405 PDAGQQ--AGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP-LPVPDTK--PP 459
P Q A Q S Q P P P+ P PP P+P LP P PP
Sbjct: 340 PHTSLQLPASQSALQ----SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 395
Query: 460 TTSTEG----GAASPTSPILVPGIKVAASHHPPDRPPDPFSTL 498
S A P P L P + ++HHPP P P +
Sbjct: 396 HLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQLM 437
Score = 41.2 bits (95), Expect = 0.002
Identities = 65/276 (23%), Positives = 87/276 (31%), Gaps = 75/276 (27%)
Query: 291 EPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFS----SPS----------P 336
+P GQG PG S +G PG P P L G + SP+ P
Sbjct: 289 QPPLHGQG-PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 347
Query: 337 SQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY-------------F 383
+ S+L + +P+ P A PH P PT+PI Q P P F
Sbjct: 348 ASQSALQSQQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPF 403
Query: 384 S--------------------HPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLN----- 418
S HP + P L Q + Q G N
Sbjct: 404 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPP 463
Query: 419 ----PNGSSQGKVHNPFLPTPMLP-------PPPPPPMARPVPLPVPDTKPPTT------ 461
P G Q PF P +P PP P + P P +PP +
Sbjct: 464 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASG 523
Query: 462 -STEGGAASPTSPILVPGIKVAASHHPPDRPPDPFS 496
S GG++ P + + + + P PP P S
Sbjct: 524 GSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRS 559
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 48.5 bits (114), Expect = 1e-05
Identities = 74/292 (25%), Positives = 102/292 (34%), Gaps = 57/292 (19%)
Query: 225 VTELVRVS--QTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVE 282
+ E +R S +P AA T N S ++ S + A S P S+ +++ S
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA---SSPLKSNKRQREKVASDT 658
Query: 283 DEMDSPGEEPFYTGQGRSPGSGSQSSGWHEV-----EPGMPSPTTLKKSEKSGFSS-PSP 336
+E D + T + P S S+ G + G P + + +S S PSP
Sbjct: 659 EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSP 718
Query: 337 SQT-----SSLGTAFTQHHRPVI---TGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAI 388
SS Q P + TG +P + P P +P + PGP S A+
Sbjct: 719 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAP-----PGTPQLPTPGPTPSATAV 773
Query: 389 RYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARP 448
PQ + P A Q Q P + H P L P PP P
Sbjct: 774 P--PQGS---------PTASQAPNQ-----PQAPTAPVPHTHIQQAPALHPQRPPS---P 814
Query: 449 VPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPP----DRPPDPFS 496
P P P PP G A P++P SH P PP P S
Sbjct: 815 HPPPHPSPHPPLQPLTGSAGQPSAP----------SHAQPPLHGQGPPGPHS 856
Score = 44.7 bits (104), Expect = 2e-04
Identities = 69/283 (24%), Positives = 90/283 (31%), Gaps = 35/283 (12%)
Query: 242 PNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSP 301
P + SD +SS+ M T T + ++ +PG P T P
Sbjct: 718 PQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV---P 774
Query: 302 GSGSQSSGWHEVEPGMPS-----------PTTLKKSEKSGFSSPSPSQTSSL----GTAF 346
GS ++ +P P+ P + S P PS L G+A
Sbjct: 775 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA- 833
Query: 347 TQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY--FSHPAIRYHPQETLKEFVQLVC 404
Q P P P P++Q PGP F P Q L
Sbjct: 834 GQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAY 893
Query: 405 PDAGQQ--AGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP-LPVPDTK--PP 459
P Q A Q S Q P P P+ P PP P+P LP P PP
Sbjct: 894 PHTSLQLPASQSALQ----SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949
Query: 460 TTSTEG----GAASPTSPILVPGIKVAASHHPPDRPPDPFSTL 498
S A P P L P + ++HHPP P P +
Sbjct: 950 HLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQLM 991
Score = 41.2 bits (95), Expect = 0.002
Identities = 65/276 (23%), Positives = 87/276 (31%), Gaps = 75/276 (27%)
Query: 291 EPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFS----SPS----------P 336
+P GQG PG S +G PG P P L G + SP+ P
Sbjct: 843 QPPLHGQG-PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 901
Query: 337 SQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY-------------F 383
+ S+L + +P+ P A PH P PT+PI Q P P F
Sbjct: 902 ASQSALQSQQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPF 957
Query: 384 S--------------------HPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLN----- 418
S HP + P L Q + Q G N
Sbjct: 958 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPP 1017
Query: 419 ----PNGSSQGKVHNPFLPTPMLP-------PPPPPPMARPVPLPVPDTKPPTT------ 461
P G Q PF P +P PP P + P P +PP +
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASG 1077
Query: 462 -STEGGAASPTSPILVPGIKVAASHHPPDRPPDPFS 496
S GG++ P + + + + P PP P S
Sbjct: 1078 GSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRS 1113
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 48.5 bits (114), Expect = 1e-05
Identities = 74/292 (25%), Positives = 102/292 (34%), Gaps = 57/292 (19%)
Query: 225 VTELVRVS--QTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVE 282
+ E +R S +P AA T N S ++ S + A S P S+ +++ S
Sbjct: 602 INEDIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA---SSPLKSNKRQREKVASDT 658
Query: 283 DEMDSPGEEPFYTGQGRSPGSGSQSSGWHEV-----EPGMPSPTTLKKSEKSGFSS-PSP 336
+E D + T + P S S+ G + G P + + +S S PSP
Sbjct: 659 EEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSP 718
Query: 337 SQT-----SSLGTAFTQHHRPVI---TGPRASPHATPSTLHFPTSPIIQQPGPYFSHPAI 388
SS Q P + TG +P + P P +P + PGP S A+
Sbjct: 719 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAP-----PGTPQLPTPGPTPSATAV 773
Query: 389 RYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARP 448
PQ + P A Q Q P + H P L P PP P
Sbjct: 774 P--PQGS---------PTASQAPNQ-----PQAPTAPVPHTHIQQAPALHPQRPPS---P 814
Query: 449 VPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPP----DRPPDPFS 496
P P P PP G A P++P SH P PP P S
Sbjct: 815 HPPPHPSPHPPLQPLTGSAGQPSAP----------SHAQPPLHGQGPPGPHS 856
Score = 44.7 bits (104), Expect = 2e-04
Identities = 69/283 (24%), Positives = 90/283 (31%), Gaps = 35/283 (12%)
Query: 242 PNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSP 301
P + SD +SS+ M T T + ++ +PG P T P
Sbjct: 718 PQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAV---P 774
Query: 302 GSGSQSSGWHEVEPGMPS-----------PTTLKKSEKSGFSSPSPSQTSSL----GTAF 346
GS ++ +P P+ P + S P PS L G+A
Sbjct: 775 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSA- 833
Query: 347 TQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY--FSHPAIRYHPQETLKEFVQLVC 404
Q P P P P++Q PGP F P Q L
Sbjct: 834 GQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAY 893
Query: 405 PDAGQQ--AGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVP-LPVPDTK--PP 459
P Q A Q S Q P P P+ P PP P+P LP P PP
Sbjct: 894 PHTSLQLPASQSALQ----SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPP 949
Query: 460 TTSTEG----GAASPTSPILVPGIKVAASHHPPDRPPDPFSTL 498
S A P P L P + ++HHPP P P +
Sbjct: 950 HLSGPSPFSMNANLPPPPALKP-LSSLSTHHPPSAHPPPLQLM 991
Score = 41.2 bits (95), Expect = 0.002
Identities = 65/276 (23%), Positives = 87/276 (31%), Gaps = 75/276 (27%)
Query: 291 EPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFS----SPS----------P 336
+P GQG PG S +G PG P P L G + SP+ P
Sbjct: 843 QPPLHGQG-PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLP 901
Query: 337 SQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQQPGPY-------------F 383
+ S+L + +P+ P A PH P PT+PI Q P P F
Sbjct: 902 ASQSALQSQQPPREQPLPPAPLAMPHIKPP----PTTPIPQLPAPQAHKHPPHLSGPSPF 957
Query: 384 S--------------------HPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLN----- 418
S HP + P L Q + Q G N
Sbjct: 958 SMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPP 1017
Query: 419 ----PNGSSQGKVHNPFLPTPMLP-------PPPPPPMARPVPLPVPDTKPPTT------ 461
P G Q PF P +P PP P + P P +PP +
Sbjct: 1018 ASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASG 1077
Query: 462 -STEGGAASPTSPILVPGIKVAASHHPPDRPPDPFS 496
S GG++ P + + + + P PP P S
Sbjct: 1078 GSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRS 1113
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 47.8 bits (112), Expect = 2e-05
Identities = 54/196 (27%), Positives = 68/196 (34%), Gaps = 39/196 (19%)
Query: 318 PSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPV------ITGPRASPHATP---STL 368
P PT L E + + S S T +L T H + ++ P +SP P S L
Sbjct: 273 PLPTPLDPEEPTFPALSSSSSTGNLAANLT--HLGIGGAGQGMSTPGSSPQHRPAGVSPL 330
Query: 369 HFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQV--GFLNPNGSSQGK 426
T QQ P S L Q V DA Q+ F GS Q
Sbjct: 331 SLSTEARRQQASPTLS----------PLSPITQAVAMDALSLEQQLPYAFFTQAGSQQ-- 378
Query: 427 VHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTS--------PILVPG 478
P P PPPPPP A P P P + P GG P++ P L
Sbjct: 379 ------PPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVT 432
Query: 479 IKVAASHHPPDRPPDP 494
+ + PP+ P P
Sbjct: 433 VPSSLPQSPPENPGQP 448
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 47.8 bits (112), Expect = 2e-05
Identities = 54/196 (27%), Positives = 68/196 (34%), Gaps = 39/196 (19%)
Query: 318 PSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPV------ITGPRASPHATP---STL 368
P PT L E + + S S T +L T H + ++ P +SP P S L
Sbjct: 257 PLPTPLDPEEPTFPALSSSSSTGNLAANLT--HLGIGGAGQGMSTPGSSPQHRPAGVSPL 314
Query: 369 HFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQV--GFLNPNGSSQGK 426
T QQ P S L Q V DA Q+ F GS Q
Sbjct: 315 SLSTEARRQQASPTLS----------PLSPITQAVAMDALSLEQQLPYAFFTQAGSQQ-- 362
Query: 427 VHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTS--------PILVPG 478
P P PPPPPP A P P P + P GG P++ P L
Sbjct: 363 ------PPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVT 416
Query: 479 IKVAASHHPPDRPPDP 494
+ + PP+ P P
Sbjct: 417 VPSSLPQSPPENPGQP 432
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 47.8 bits (112), Expect = 2e-05
Identities = 71/293 (24%), Positives = 105/293 (35%), Gaps = 68/293 (23%)
Query: 231 VSQTPIAAGTGPNFSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGE 290
VS + +G N SLS + +SS S+S LPS+ + S+
Sbjct: 870 VSSWALGGDSGENTSLSGIPTSSVLSLS-------LPSSVAQSN---------------- 906
Query: 291 EPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTL----KKSEKSGFSSP----SPSQTSSL 342
F G G S +Q + P P P L +K K+G + P SP+ ++S+
Sbjct: 907 --FPQGSGASEMVSNQPANLLVQPPSQPVPENLVPESQKDRKAGSALPGFANSPAGSTSV 964
Query: 343 GTAFTQHHRPVITGPRASPHA----TPSTLHFPTSPIIQQPGPYF---------SHPAIR 389
H V G +A+ + T L F S ++ P + S ++
Sbjct: 965 VLVPPAHGTLVPDGNKANHSSHQEDTYGALDFTLSRTLENPVNVYNPSHSDSLASQQSVA 1024
Query: 390 YHPQET------LKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPP 443
HP+++ L F Q V DA Q G + +P PP
Sbjct: 1025 SHPRQSGPGAPNLDRFYQQVTKDAQGQPGLE-----------RAQQELVPPQQQASPPQL 1073
Query: 444 PMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPPDRPPDPFS 496
P A L P++ P + A SP S +LV A P RPP S
Sbjct: 1074 PKAMFSELSNPESLPAQGQAQNSAQSPASLVLVD-----AGQQLPPRPPQSSS 1121
Score = 34.3 bits (77), Expect = 0.27
Identities = 53/227 (23%), Positives = 81/227 (35%), Gaps = 26/227 (11%)
Query: 263 RRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRS-PGSGSQSSGWHEVEPGMPSPT 321
R++L ST SS+K V + P F G P + ++ S EP +P P
Sbjct: 59 RQALQSTPLGSSSKSSPPV---LQGPAPAGFSQHPGLLVPHTHARDSSQGPCEP-LPGPL 114
Query: 322 TLKKSEKSGFSS---------PSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPT 372
T ++ S FS P ++++ +G + + + P P P T H
Sbjct: 115 TQPRAHASPFSGALTPSAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPETSH-GG 173
Query: 373 SPIIQQPGPYFSHPAIRYHPQE-TLKEFVQLVCPDAG-QQAGQVGFLNPNGSSQGKVHNP 430
P PG P R +P + + P G Q GQ G + G+ +P
Sbjct: 174 HPHGNMPG--LDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQWGPVQGGPQPSGQHRSP 231
Query: 431 FLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVP 477
P P P P VP P+ +G SP++ P
Sbjct: 232 C-------PEGPVPSGVPCATSVPHFPTPSILHQGPGHEQHSPLVAP 271
Score = 34.3 bits (77), Expect = 0.27
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 407 AGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPT----TS 462
AG +A V LNP+G+ + + P + P P P+ + +P PD + P T
Sbjct: 2187 AGTRARYVDVLNPSGTQRSEP--ALAPADFVAPLAPLPIPSNLFVPTPDAEEPQLPDGTG 2244
Query: 463 TEGGAA---------SPTSPILVPGIKVAASHHPPDRP 491
EG AA +P +L + S P RP
Sbjct: 2245 REGPAAARGLANPEPAPEPKVLSSAASLPGSELPSSRP 2282
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 47.8 bits (112), Expect = 2e-05
Identities = 57/238 (23%), Positives = 84/238 (35%), Gaps = 18/238 (7%)
Query: 257 MSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQSSGWHEVEPG 316
+ P A + L + + +STK + V + P P + P + P
Sbjct: 773 LPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPP 832
Query: 317 MPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPII 376
+P P ++S + P PS S + + Q I P P+ P P+
Sbjct: 833 VPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQ-----IASQFPPPPTPPAMESQPLKPVP 887
Query: 377 QQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTPM 436
P S PA++ P+ + + PD + + P P P P
Sbjct: 888 ANVAPQ-SPPAVKAKPKWQPSS-IPVPSPDFPPPPPESSLVFPPP--------PPSPVPA 937
Query: 437 LPPPPPP-PMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVA--ASHHPPDRP 491
PPPPPP P P K TS+ GG P +P IK + A H P RP
Sbjct: 938 PPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRP 995
Score = 43.1 bits (100), Expect = 6e-04
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 417 LNPNGSSQGKVHNPFL---PTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSP 473
L P S Q K+ P+ P+P LPPPPPP P P P P PP S +A +P
Sbjct: 605 LVPPLSPQPKIVTPYTASQPSPPLPPPPPP--PPPPPPPPPPPPPPLPSQSAPSAGSAAP 662
Query: 474 ILVPGIKVA----ASHHPPD--RPPDP 494
+ V + AS H +PP P
Sbjct: 663 MFVKYSTITRLQNASQHSGALFKPPTP 689
Score = 38.9 bits (89), Expect = 0.011
Identities = 31/87 (35%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 426 KVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPP--------TTSTE------GGAASPT 471
K+H T + PP PPPP P+P P+P PP TST+ AA PT
Sbjct: 748 KIHQVQHITQVAPPTPPPP--PPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPT 805
Query: 472 SPILVPGIK----VAASHHPPDRPPDP 494
VP K AS+ PP P P
Sbjct: 806 PTPPVPPAKKQPAFPASYIPPSPPTPP 832
Score = 38.5 bits (88), Expect = 0.014
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 34/117 (29%)
Query: 413 QVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTST--------- 463
Q + P +SQ P P P PPPPPPP P P P+P P+ +
Sbjct: 612 QPKIVTPYTASQPSPPLPPPPPPPPPPPPPPP---PPPPPLPSQSAPSAGSAAPMFVKYS 668
Query: 464 -----------EGGAASPTSP-----------ILVPGIKVAASHHPPDRPPDPFSTL 498
G P +P ILVP V PP PP P S +
Sbjct: 669 TITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAM 725
Score = 37.7 bits (86), Expect = 0.024
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 430 PFLPTPMLPPP-----------PPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPG 478
P PTP +PP PP P PVP+P P + SP SP+
Sbjct: 803 PPTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVV 862
Query: 479 IKVAASHHPPDRPP 492
++A+ PP PP
Sbjct: 863 KQIASQFPPPPTPP 876
Score = 36.2 bits (82), Expect = 0.071
Identities = 61/265 (23%), Positives = 90/265 (33%), Gaps = 34/265 (12%)
Query: 245 SLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSG 304
S D S S S+ G+ S+P + S S + V D +P + +S S
Sbjct: 522 SAYDWTSLSSSSIKSGSSSSSIPESQSNHSNQSDSGVSDT------QPAGHVRSQSIVSS 575
Query: 305 SQSSGWHEVEPGMPSPTTLKKSEKSGFSS--PSPSQTSSLGTAFTQHH-RPVITGPRASP 361
S W S +S ++S P S + T +T P + P P
Sbjct: 576 VFSEAWKRGTQLEESSKARMESMNRPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPP 635
Query: 362 HATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNG 421
P P P+ Q P A + T+ +A Q +G + F P
Sbjct: 636 PPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRL-----QNASQHSGAL-FKPPTP 689
Query: 422 ---SSQGKVHNPFLPT-----PMLPPPPPP----PMARPVPLPVPDTKPPTTSTEGGAAS 469
SQ +P P PPPPPP MA+ P P + P ++
Sbjct: 690 PVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQ-------FSA 742
Query: 470 PTSPILVPGIKVAASHHPPDRPPDP 494
P P+ + ++ PP PP P
Sbjct: 743 PPPPLKIHQVQHITQVAPPTPPPPP 767
Score = 31.6 bits (70), Expect = 1.7
Identities = 47/175 (26%), Positives = 61/175 (34%), Gaps = 26/175 (14%)
Query: 315 PGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTS- 373
P P PT +KSG S+TSS G +P T R S + S P
Sbjct: 939 PPPPPPTASPTPDKSGSPGKKTSKTSSPGGK-----KPPPTPQRNSSIKSSSGAEHPEPK 993
Query: 374 -PIIQQPGPYFSHPAIRYHP-QETLKEFVQLVCPDAGQ------------QAGQVGFLNP 419
P + F+ PA P +ETL P G+ Q G V P
Sbjct: 994 RPSVDSLVSKFTPPAESGSPSKETLPP--PAAPPKPGKLNLSGVNLPGVLQQGCVSAKAP 1051
Query: 420 NGSSQGKVHNPFLPTPM----LPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASP 470
S +GK P+P PPPPP P+ +P TS + +P
Sbjct: 1052 VLSGRGKDSVVEFPSPPSDSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNP 1106
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 47.4 bits (111), Expect = 3e-05
Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 27/257 (10%)
Query: 250 ESSSYYSMSPGAMRRS---LPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGSGSQ 306
E+ ++S GA R + P T S + +R ++ E+ P P + + G
Sbjct: 149 EAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKS 208
Query: 307 SSGWHEVEPGMPSPTTLKK-SEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATP 365
S E PSP ++ S G P+ SS T + P +GP A TP
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS---PARSGPSA--RGTP 263
Query: 366 STLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQ-QAGQVGFLNPNGSSQ 424
P+ P + G P P++ P G + + +P+G+
Sbjct: 264 RAPAHPSQP--KPKGLQALRPPQVTPPRKD-------AAPALGPLSSSPLATPSPSGTKA 314
Query: 425 GKVHNPFLPTPMLPP--PPPPPMARPVPLPVPD-TKPPTTSTEGGAASPTSPILVPGIKV 481
V P LP PP PP+A P+PL P + PP+ T P+ P P
Sbjct: 315 RPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQT-----LPSPPATPPSQAP 369
Query: 482 AASHHPPDRPPDPFSTL 498
+ PP + P T+
Sbjct: 370 PSMTTPPMQAPPSLQTI 386
Score = 45.4 bits (106), Expect = 1e-04
Identities = 51/194 (26%), Positives = 73/194 (37%), Gaps = 27/194 (13%)
Query: 311 HEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHF 370
H P P+P L+ + S ++P P SS+ T Q P + P +P
Sbjct: 557 HLETPPCPAPCPLQ-APPSPLTTPPPETPSSIATPPPQAP-PALASPPLQGLPSPPLSPL 614
Query: 371 PTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNP 430
T P Q P + P ++ P P A + +P + VH
Sbjct: 615 ATPP--PQAPPXLALPPLQAPPS-----------PPASPPLSPLATPSPQAPNALAVH-- 659
Query: 431 FLPTPMLPPPPPP---PMARPVPLPV-PDTKPPTTSTEGGAAS----PTSPILVPGIKVA 482
L P PPP PP P + P PV P PP+ + AA P SP P + +
Sbjct: 660 LLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPS 719
Query: 483 ASHHPPDRPPDPFS 496
A+ PP + P P +
Sbjct: 720 AT--PPPQAPPPLA 731
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/178 (26%), Positives = 64/178 (35%), Gaps = 26/178 (14%)
Query: 331 FSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPSTLHFPTSPIIQ---QPGPYFSHPA 387
F + SP QT + + T RP T P + P P +L P SP +Q P
Sbjct: 429 FLTMSPRQTQA---SLTSPSRPASTPPDSPPLQAPLSL--PASPPLQTSLSPAVSPLSSP 483
Query: 388 IRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLPTP---MLPPP---- 440
+ HP + L QA + P +Q + P L TP + PP
Sbjct: 484 LTIHPLQALSSLAS-----HSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENL 538
Query: 441 ----PPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAAS--HHPPDRPP 492
PPP PL P + P +P SP+ P + +S PP PP
Sbjct: 539 PSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPP 596
Score = 40.4 bits (93), Expect = 0.004
Identities = 49/184 (26%), Positives = 64/184 (34%), Gaps = 22/184 (11%)
Query: 316 GMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHATPS-------TL 368
G+PSP S ++P P L Q P SP ATPS +
Sbjct: 605 GLPSPPL------SPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 658
Query: 369 HFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSSQGKVH 428
H +P P P P + P + P + L S
Sbjct: 659 HLLQAPFSPPPSPPVQAP---FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP- 714
Query: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPILVPGIKVAASHHPP 488
P P+ PP PPP+A P PL VP + PP + +A+P P VP + A P
Sbjct: 715 -PMSPSATPPPQAPPPLAAP-PLQVPPS-PPASPPMSPSATP--PPRVPPLLAAPPLQVP 769
Query: 489 DRPP 492
PP
Sbjct: 770 PSPP 773
Score = 37.0 bits (84), Expect = 0.042
Identities = 57/225 (25%), Positives = 84/225 (37%), Gaps = 27/225 (12%)
Query: 287 SPGEEPFYTGQGRSPGSGSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAF 346
SP P T ++P S + +V P P+ + S +P P L
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPP--LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Query: 347 TQHHRPVITG-----PRASPHATPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQ 401
+ P ++ PR P L P SP P + P + P
Sbjct: 740 SPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQA 799
Query: 402 LVCPDAGQQAGQVGFLNPNGSSQGKVHNPFLP-TPMLPPPP--PPPMARPVPLPVPDTKP 458
L P A GQ F +P+ S LP +P+ PPP PP +A P+ L VP + P
Sbjct: 800 LPSPPASFP-GQAPF-SPSAS---------LPMSPLATPPPQAPPVLAAPL-LQVPPSPP 847
Query: 459 PTTSTEGGAASPT----SPILVPGIKVAASHHPPDRPP-DPFSTL 498
+ + + PT + + P + +A + PP P P STL
Sbjct: 848 ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTL 892
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 47.0 bits (110), Expect = 4e-05
Identities = 44/143 (30%), Positives = 57/143 (39%), Gaps = 20/143 (13%)
Query: 357 PRASPHATPSTLHFPTSPI-IQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVG 415
P+ +PH LH PTSP+ + P P PA + P+ + + P AG G
Sbjct: 1351 PQFAPHGR-HPLHQPTSPLPLYSPAPQHP-PAHKQGPKHFIFSHHPQMMPAAGAAGGPGS 1408
Query: 416 FLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTK----PPTTSTEGGAASPT 471
P G S H+P P P PP P P+P P P T PPT SP
Sbjct: 1409 --RPPGGSYSHPHHPQSPLSPHSPIPPHPSYPPLPPPSPHTPHSPLPPT--------SPH 1458
Query: 472 SPILV---PGIKVAASHHPPDRP 491
P+ PG S +P +P
Sbjct: 1459 GPLHASGPPGTANPPSANPKAKP 1481
Score = 30.0 bits (66), Expect = 5.1
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 408 GQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGA 467
G G +G L S +H + P PPP P +P LP P +PP G
Sbjct: 1248 GHSHGGLGVLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQP-SLPPPPQQPPPLPQLG-- 1304
Query: 468 ASPTSPILVPGIKVAASHHPPDRPPDP 494
+ P P P + H P P
Sbjct: 1305 SIPPPPASAPPVGPHRHFHAHGPVPGP 1331
Score = 29.3 bits (64), Expect = 8.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 406 DAGQQAGQVGFLNPNGSSQGKVHNPFLPTPMLPPPPPPP 444
DAG++ + + + + +G V + P +PPPPPPP
Sbjct: 1149 DAGKRGRRNSVGSLDSTIEGSVISSPRPHQRMPPPPPPP 1187
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 46.6 bits (109), Expect = 5e-05
Identities = 72/317 (22%), Positives = 98/317 (30%), Gaps = 85/317 (26%)
Query: 184 HAADSSQSESPSQPSDADIKDQPENGHLGFQDSFVTSGVFSVTELVRVSQTPIAAGTGPN 243
H A + + P P A K + + +L + + + P+ A G
Sbjct: 287 HIASDCKFQRPGDPQSAQDKARMDKEYLSL--------------MAELGEAPVPASVGST 332
Query: 244 FSLSDLESSSYYSMSPGAMRRSLPSTSSTSSTKRLKSVEDEMDSPGEEPFYTGQGRSPGS 303
+ +S + P A + P S S+T+ P + G P
Sbjct: 333 SGPATTPLAS--APRPAAPANNPPPPSLMSTTQ-------------SRPPWMNSG--PSE 375
Query: 304 GSQSSGWHEVEPGMPSPTTLKKSEKSGFSSPSPSQTSSLGTAFTQHHRPVITGPRASPHA 363
G H PG P F P PS T G QH+ P P
Sbjct: 376 SRPYHGMHGGGPGGPG------GGPHSFPHPLPSLTGGHGGHPMQHN------PNGPP-- 421
Query: 364 TPSTLHFPTSPIIQQPGPYFSHPAIRYHPQETLKEFVQLVCPDAGQQAGQVGFLNPNGSS 423
P + P P+ Q P HP + P P Q G P GS
Sbjct: 422 -PPWMQPPPPPMNQGP-----HPPGHHGP------------PPMDQYLGST----PVGSG 459
Query: 424 -----QGKVHNPFLPTPMLPPPPPPPMARPVPLP-------------VPDTKPPTTSTEG 465
QGK P P M+PPPPPPP +P P P P PP++S
Sbjct: 460 VYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMAS 519
Query: 466 GAASPTSPILVPGIKVA 482
P +P +A
Sbjct: 520 STPLPWQQRSLPAAAMA 536
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,481,667
Number of Sequences: 37866
Number of extensions: 1589128
Number of successful extensions: 24035
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 879
Number of HSP's that attempted gapping in prelim test: 11241
Number of HSP's gapped (non-prelim): 7120
length of query: 498
length of database: 18,247,518
effective HSP length: 106
effective length of query: 392
effective length of database: 14,233,722
effective search space: 5579619024
effective search space used: 5579619024
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.