LYVE1 27527

Name: LYVE1	Sequence: fasta or formatted (322aa)		NCBI GI: 40549451
Description: lymphatic vessel endothelial hyaluronan receptor 1		Referenced in: Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 27 3 C cysteine 3.1 10 1 D aspartate 2.2 7 1 E glutamate 7.5 24 2 F phenylalanine 5.0 16 2 G glycine 5.0 16 2 H histidine 0.0 0 0 I isoleucine 5.0 16 2 K lysine 7.8 25 2 L leucine 7.5 24 3 M methionine 1.6 5 1 N asparagine 4.7 15 1 P proline 5.6 18 2 Q glutamine 3.1 10 2 R arginine 3.4 11 2 S serine 9.0 29 2 T threonine 10.2 33 3 V valine 7.8 25 2 W tryptophan 1.2 4 1 Y tyrosine 2.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lymphatic vessel endothelial hyaluronan receptor 1 [... CD44 0.084 CD44 antigen isoform 4 precursor CD44 0.084 CD44 antigen isoform 3 precursor CD44 0.084 CD44 antigen isoform 2 precursor CD44 0.084 CD44 antigen isoform 1 precursor TNFAIP6 0.057 tumor necrosis factor, alpha-induced protein 6 precu... STAB1 0.042 stabilin 1 precursor HAPLN3 0.041 hyaluronan and proteoglycan link protein 3 ACAN 0.037 aggrecan isoform 2 precursor ACAN 0.037 aggrecan isoform 1 precursor STAB2 0.036 stabilin 2 precursor VCAN 0.032 versican isoform 2 VCAN 0.032 versican isoform 1 CD44 0.031 CD44 antigen isoform 5 precursor BCAN 0.031 brevican isoform 2 BCAN 0.031 brevican isoform 1 HAPLN2 0.029 brain link protein-1 HAPLN1 0.029 hyaluronan and proteoglycan link protein 1 HAPLN4 0.028 hyaluronan and proteoglycan link protein 4 NCAN 0.028 chondroitin sulfate proteoglycan 3 SUSD5 0.024 sushi domain containing 5 MUC2 0.018 mucin 2 precursor MYBPH 0.016 myosin binding protein H MUC5AC 0.015 mucin 5AC MUC5B 0.015 mucin 5, subtype B, tracheobronchial LOC100131251 0.013 PREDICTED: hypothetical protein LOC100131251 0.013 PREDICTED: hypothetical protein GP1BA 0.013 platelet glycoprotein Ib alpha polypeptide precurso... LOC730474 0.013 PREDICTED: hypothetical protein, partial MUC6 0.013 mucin 6, gastric Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.