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Search of human proteins with 30520333
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
sapiens]
(234 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ... 461 e-130
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 409 e-114
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H... 95 5e-20
gi|19923929 CKLF-like MARVEL transmembrane domain containing 7 i... 66 3e-11
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 57 2e-08
gi|7705755 plasmolipin [Homo sapiens] 54 9e-08
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ... 54 1e-07
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [... 54 2e-07
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens] 48 8e-06
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens] 48 8e-06
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens] 48 8e-06
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens] 48 8e-06
gi|16418397 MAL2 proteolipid protein [Homo sapiens] 45 5e-05
gi|4505091 T-lymphocyte maturation-associated protein isoform a ... 42 6e-04
gi|31657099 CKLF-like MARVEL transmembrane domain containing 7 i... 38 0.009
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom... 35 0.072
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens] 32 0.47
gi|12408663 T-lymphocyte maturation-associated protein isoform c... 32 0.61
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom... 32 0.61
gi|27477113 sterol regulatory element-binding transcription fact... 31 0.80
gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] 31 0.80
gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] 31 0.80
gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens] 31 1.0
gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ... 31 1.0
gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens] 30 1.8
gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens] 30 1.8
gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo... 30 2.3
gi|130978359 tectonic family member 1 isoform 1 [Homo sapiens] 29 3.0
gi|130978357 tectonic family member 1 isoform 2 [Homo sapiens] 29 3.0
gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens] 29 3.0
>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
sapiens]
Length = 234
Score = 461 bits (1186), Expect = e-130
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA
Sbjct: 1 MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
Query: 61 QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL
Sbjct: 61 QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
Query: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR
Sbjct: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
Query: 181 QQSTNDYIRARTESRDVDSRPEIQRLDTFSYSTNVTVRKKSPTNLLSLNHWQLA 234
QQSTNDYIRARTESRDVDSRPEIQRLDTFSYSTNVTVRKKSPTNLLSLNHWQLA
Sbjct: 181 QQSTNDYIRARTESRDVDSRPEIQRLDTFSYSTNVTVRKKSPTNLLSLNHWQLA 234
>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
sapiens]
Length = 208
Score = 409 bits (1050), Expect = e-114
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA
Sbjct: 1 MRSGEELDGFEGEASSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVA 60
Query: 61 QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL
Sbjct: 61 QVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNL 120
Query: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR
Sbjct: 121 TDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVR 180
Query: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208
QQSTNDYIRARTESRDVDSRPEIQRLDT
Sbjct: 181 QQSTNDYIRARTESRDVDSRPEIQRLDT 208
>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
sapiens]
Length = 183
Score = 95.1 bits (235), Expect = 5e-20
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Query: 27 YQPTTE--PVSQRRGLAGLRCDPDYLRGALGR--LKVAQVILALIAFICIETIMACSPCE 82
Y PTTE P R +GL R L R LK Q++L+L+AFIC E + C+ C
Sbjct: 7 YSPTTEEDPGPARGPRSGLAAYFFMGRLPLLRRVLKGLQLLLSLLAFICEEVVSQCTLCG 66
Query: 83 GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
GLYFFEFVSCSAF+++ ++LI++ + R+ +D T + +F +ASI+ +
Sbjct: 67 GLYFFEFVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGCVFLLASIIFVS 126
Query: 143 LNHRAGAEIAAVIFGFLATAAYAVN--TFLAVQKWRVSVRQQSTNDYIRARTE 193
+ R AEIAA++FGF+A+ + ++ T L ++ +R+ A TE
Sbjct: 127 THDRTSAEIAAIVFGFIASFMFLLDFITMLYEKRQESQLRKPENTTRAEALTE 179
>gi|19923929 CKLF-like MARVEL transmembrane domain containing 7
isoform a [Homo sapiens]
Length = 175
Score = 65.9 bits (159), Expect = 3e-11
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 15 SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIET 74
SS S + + QP+ P L GL D Y R LKVAQ++ LIAFIC+ +
Sbjct: 13 SSGSALGPGAGAAQPSASP------LEGL-LDLSYPRTHAALLKVAQMVTLLIAFICVRS 65
Query: 75 IMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFF 134
+ + YF C ++ L+ + + I+W L++L++ + L
Sbjct: 66 SLWTNYSAYSYFEVVTICDLIMILAFYLVHL-FRFYRVLTCISWPLSELLHYLIGTLLLL 124
Query: 135 IASIVLAALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTN 185
IASIV A+ ++ +A IFGF+AT + +L+ +++S QST+
Sbjct: 125 IASIVAASKSYNQSGLVAGAIFGFMATFLCMASIWLS---YKISCVTQSTD 172
>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
[Homo sapiens]
Length = 173
Score = 56.6 bits (135), Expect = 2e-08
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 46 DPDYLRGALGRLKVAQVILALIAFICIE-TIMACSPCEGLYFFEFVSCSAFVVTGVLLIM 104
D ++LR G L VA+++L L+ + I T P G + FV+ +V+T LI+
Sbjct: 33 DREFLRTLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFG--WVMFVAVFYWVLTVFFLII 90
Query: 105 FSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL-------NHRAGAEIAAVIFG 157
+ + RIPQ+ W L G SAF+ ++++ V+ A +H + A+ F
Sbjct: 91 YITMTYTRIPQVPWTTVGLCFNG-SAFVLYLSAAVVDASSVSPERDSHNFNSWAASSFFA 149
Query: 158 FLATAAYAVNTFLAVQKWR 176
FL T YA NT+ + WR
Sbjct: 150 FLVTICYAGNTYFSFIAWR 168
>gi|7705755 plasmolipin [Homo sapiens]
Length = 182
Score = 54.3 bits (129), Expect = 9e-08
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 23 ASSPYQPTTEPVSQRRG----LAGLRCDPDYLRGALGRLKVAQVILALIAFICI-ETIMA 77
A P + +T S +G ++ LR D ++R LG L + Q++L L+ + I +T
Sbjct: 2 AEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLVLGLLVWALIADTPYH 61
Query: 78 CSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIAS 137
P G + FV+ ++VT VL ++ LHM++ + W L ++ + L+ A
Sbjct: 62 LYPAYG--WVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLVLMIFNISATVLYITAF 119
Query: 138 IVLAA------------LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
I +A N RA AA F L AY V+ F + Q WR
Sbjct: 120 IACSAAVDLTSLRGTRPYNQRA----AASFFACLVMIAYGVSAFFSYQAWR 166
>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
sapiens]
Length = 156
Score = 53.9 bits (128), Expect = 1e-07
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 40 LAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTG 99
L G D +L G L ++ L LI FIC ++ L F +T
Sbjct: 20 LQGFAVDKAFLTSHKGILLETELALTLIIFICFTASISAYMAAALL--------EFFITL 71
Query: 100 VLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFL 159
L +++ + R +INW D + + +F + S AA+ R GA IAA +FG +
Sbjct: 72 AFLFLYATQYYQRFDRINWPCLDFLRCVSAIIIFLVVSF--AAVTSRDGAAIAAFVFGII 129
Query: 160 ATAAYAVNTF 169
+ +A + F
Sbjct: 130 LVSIFAYDAF 139
>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
[Homo sapiens]
Length = 152
Score = 53.5 bits (127), Expect = 2e-07
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 48 DYLRGALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSL 107
++ R G L A++IL L+ IC A +P + +S ++ + +++
Sbjct: 18 NFSRTRKGILLFAEIILCLVILICFS---ASTPG-----YSSLSVIEMILAAIFFVVYMC 69
Query: 108 NLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAAL--NHRAGAEIAAVIFGFLATAAYA 165
+LH +IP INW +D T ++A L+ I SIV+ NH ++I A + G +AT +
Sbjct: 70 DLHTKIPFINWPWSDFFRTLIAAILYLITSIVVLVERGNH---SKIVAGVLGLIATCLFG 126
Query: 166 VNTFL 170
+ ++
Sbjct: 127 YDAYV 131
>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 47.8 bits (112), Expect = 8e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 29 PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
P EP R GL L +L GRL +A+ L+ I FIC A +
Sbjct: 10 PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
Query: 83 GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
F F++ L ++ L+ + + W + D + +A ++F SI A
Sbjct: 67 ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
+ GA AA +FGF AT +A + +L ++Q + D A +TE + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 47.8 bits (112), Expect = 8e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 29 PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
P EP R GL L +L GRL +A+ L+ I FIC A +
Sbjct: 10 PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
Query: 83 GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
F F++ L ++ L+ + + W + D + +A ++F SI A
Sbjct: 67 ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
+ GA AA +FGF AT +A + +L ++Q + D A +TE + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 47.8 bits (112), Expect = 8e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 29 PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
P EP R GL L +L GRL +A+ L+ I FIC A +
Sbjct: 10 PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
Query: 83 GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
F F++ L ++ L+ + + W + D + +A ++F SI A
Sbjct: 67 ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
+ GA AA +FGF AT +A + +L ++Q + D A +TE + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 47.8 bits (112), Expect = 8e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 15/178 (8%)
Query: 29 PTTEPVSQRR------GLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPCE 82
P EP R GL L +L GRL +A+ L+ I FIC A +
Sbjct: 10 PDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASA--- 66
Query: 83 GLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAA 142
F F++ L ++ L+ + + W + D + +A ++F SI A
Sbjct: 67 ----FLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISIT-AI 121
Query: 143 LNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRVSVRQQSTNDYIRA-RTESRDVDS 199
+ GA AA +FGF AT +A + +L ++Q + D A +TE + DS
Sbjct: 122 AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDS 179
>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
Length = 176
Score = 45.1 bits (105), Expect = 5e-05
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 19 MISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMAC 78
M +G +S P VS L PD LR G +++ + +I + +
Sbjct: 1 MSAGGASVPPPPNPAVSFPPPRVTLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVP 60
Query: 79 SPC-EGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIAS 137
P +G + FVS +AF + + L MF + +I NWN D + F+F+ +
Sbjct: 61 LPLLQG--WVMFVSVTAFFFSLLFLGMFLSGMVAQI-DANWNFLDFAYH-FTVFVFYFGA 116
Query: 138 IVLAAL--------------------NHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
+L A +++ +AA IF F+ TA Y + LA+++WR
Sbjct: 117 FLLEAAATSLHDLHCNTTITGQPLLSDNQYNINVAASIFAFMTTACYGCSLGLALRRWR 175
>gi|4505091 T-lymphocyte maturation-associated protein isoform a
[Homo sapiens]
Length = 153
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 89 FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV--LAALNHR 146
FVS FV T L+I++ + H + +W D +A + AS++ LA + +
Sbjct: 57 FVSVFCFVATTTLIILYIIGAHGG--ETSWVTLDAAYHCTAALFYLSASVLEALATITMQ 114
Query: 147 AG-------AEIAAVIFGFLATAAYAVNTFLAVQKWRVS 178
G IAAV+F ++AT Y V+ ++ +W+ S
Sbjct: 115 DGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 153
>gi|31657099 CKLF-like MARVEL transmembrane domain containing 7
isoform b [Homo sapiens]
Length = 142
Score = 37.7 bits (86), Expect = 0.009
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Query: 15 SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIET 74
SS S + + QP+ P L GL D Y R LKVAQ++ LIAFIC+ +
Sbjct: 13 SSGSALGPGAGAAQPSASP------LEGL-LDLSYPRTHAALLKVAQMVTLLIAFICVRS 65
Query: 75 IMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFF 134
+ + YF C ++ L+ + + I+W L+ G A
Sbjct: 66 SLWTNYSAYSYFEVVTICDLIMILAFYLVHL-FRFYRVLTCISWPLSIF---GFMATFLC 121
Query: 135 IASIVLA 141
+ASI L+
Sbjct: 122 MASIWLS 128
>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
sapiens]
Length = 286
Score = 34.7 bits (78), Expect = 0.072
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 55 GRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIP 114
G LK+ ++ L L A C A F S +V +LI + L LH +
Sbjct: 137 GMLKILRLSLILGALACFIITQANES-----FITITSLEICIVVFFILI-YVLTLHHLLT 190
Query: 115 QINWNLTDLVNTGLSAFLFFIASIVLAALNHRAGAEIAAVIFGFLATAAY--AVNTFLAV 172
++W L DL N+ ++A F++ + + A+ + + V TA ++ F+
Sbjct: 191 YLHWPLLDLTNSIITA--VFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVT 248
Query: 173 QKWRVSVRQ 181
K R ++++
Sbjct: 249 TKMRTNLKR 257
>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
Length = 248
Score = 32.0 bits (71), Expect = 0.47
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 53 ALGRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMR 112
+LG L A ++L+ + + I+ + FF F ++++S +H
Sbjct: 94 SLGCLIAAMILLSSLT---VHPILRLIITMEISFFSF-----------FILLYSFAIHRY 139
Query: 113 IPQINWNLTDLVNTGLSAFLFFIASIVLAALNHRA 147
IP I W ++DL N L A F + ++V A + R+
Sbjct: 140 IPFILWPISDLFN-DLIACAFLVGAVVFAVRSRRS 173
>gi|12408663 T-lymphocyte maturation-associated protein isoform c
[Homo sapiens]
Length = 97
Score = 31.6 bits (70), Expect = 0.61
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 10/60 (16%)
Query: 129 SAFLFFIASIVLAAL---------NHRAGAE-IAAVIFGFLATAAYAVNTFLAVQKWRVS 178
+A LF++++ VL AL +R E IAAV+F ++AT Y V+ ++ +W+ S
Sbjct: 38 TAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHAVFSLIRWKSS 97
>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
sapiens]
Length = 231
Score = 31.6 bits (70), Expect = 0.61
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 55 GRLKVAQVILALIAFICIETIMACSPCEGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIP 114
G LK+ ++ L L A C A F S +V +LI + L LH +
Sbjct: 137 GMLKILRLSLILGALACFIITQANES-----FITITSLEICIVVFFILI-YVLTLHHLLT 190
Query: 115 QINWNLTDLVNTGLSAFLFFIASIV 139
++W L DL N+ ++A + +I+
Sbjct: 191 YLHWPLLDLTNSIITAVFLSVVAIL 215
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 31.2 bits (69), Expect = 0.80
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 15 SSTSMISGASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICI 72
+S S SPY +EP S A ++ +PD ALG + ++++L ++ F+C+
Sbjct: 435 ASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCL 492
>gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens]
Length = 558
Score = 31.2 bits (69), Expect = 0.80
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 23/103 (22%)
Query: 97 VTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFI---ASIVLAALNHRAG----- 148
+T +++++ ++++ R ++ N L G++ LF + A+IV +R G
Sbjct: 265 ITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYP 324
Query: 149 ---------------AEIAAVIFGFLATAAYAVNTFLAVQKWR 176
+IAA+IF F+ Y ++ + ++ WR
Sbjct: 325 LFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367
>gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens]
Length = 457
Score = 31.2 bits (69), Expect = 0.80
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 23/103 (22%)
Query: 97 VTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFI---ASIVLAALNHRAG----- 148
+T +++++ ++++ R ++ N L G++ LF + A+IV +R G
Sbjct: 265 ITTIIILVLGMSMYYRTILLDSNWWPLTEFGINVALFILYMAAAIVYVNDTNRGGLCYYP 324
Query: 149 ---------------AEIAAVIFGFLATAAYAVNTFLAVQKWR 176
+IAA+IF F+ Y ++ + ++ WR
Sbjct: 325 LFNTPVNAVFCRVEGGQIAAMIFLFVTMIVYLISALVCLKLWR 367
>gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens]
Length = 233
Score = 30.8 bits (68), Expect = 1.0
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 21/108 (19%)
Query: 91 SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
+CS V GVL + L L + PQI+ L+D+ + AFL+F+ L
Sbjct: 67 ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 126
Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWRV 177
A LN A AA+ F F + +A LA Q++++
Sbjct: 127 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQI 174
>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
sapiens]
Length = 169
Score = 30.8 bits (68), Expect = 1.0
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 86 FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNH 145
F S +V +LI + L LH + ++W L DL N+ ++A F++ + + A+
Sbjct: 46 FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITA--VFLSVVAILAMQE 102
Query: 146 RAGAEIAAVIFGFLATAAY--AVNTFLAVQKWRVSVRQ 181
+ + V TA ++ F+ K R ++++
Sbjct: 103 KKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
>gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens]
Length = 192
Score = 30.0 bits (66), Expect = 1.8
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 91 SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
+CS V GVL + L L + PQI+ L+D+ + AFL+F+ L
Sbjct: 68 ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 127
Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
A LN A AA+ F F + +++ LAV++++
Sbjct: 128 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 174
>gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens]
Length = 191
Score = 30.0 bits (66), Expect = 1.8
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 91 SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140
+CS V GVL + L L + PQI+ L+D+ + AFL+F+ L
Sbjct: 67 ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 126
Query: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176
A LN A AA+ F F + +++ LAV++++
Sbjct: 127 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 173
>gi|7657544 sodium channel, voltage gated, type VIII, alpha [Homo
sapiens]
Length = 1980
Score = 29.6 bits (65), Expect = 2.3
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 22 GASSPYQPTTEPVSQRRGLAGLRCDPDYLRGALGRLKVAQVILALIAFICIETIMACSPC 81
G+ P +P P+++ +G+ D++ + + +I + + +ET
Sbjct: 1496 GSKKPQKPIPRPLNKIQGIVF-----DFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQM 1550
Query: 82 EGLYFFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIV 139
E + ++ + F +L MF+L + I WN+ D V LS F+A I+
Sbjct: 1551 ENILYWINLVFVIFFTCECVLKMFALRHYYFT--IGWNIFDFVVVILSIVGMFLADII 1606
>gi|130978359 tectonic family member 1 isoform 1 [Homo sapiens]
Length = 592
Score = 29.3 bits (64), Expect = 3.0
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 78 CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
C P C + F F +CS VVTG +++SLN PQ + L D +N +
Sbjct: 93 CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150
>gi|130978357 tectonic family member 1 isoform 2 [Homo sapiens]
Length = 587
Score = 29.3 bits (64), Expect = 3.0
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 78 CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
C P C + F F +CS VVTG +++SLN PQ + L D +N +
Sbjct: 93 CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150
>gi|18543327 tectonic family member 1 isoform 3 [Homo sapiens]
Length = 573
Score = 29.3 bits (64), Expect = 3.0
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 78 CSP-CEGLYFFEFVSCSAFVVTG------VLLIMFSLNLHMRIPQINWNLTDLVNTGL 128
C P C + F F +CS VVTG +++SLN PQ + L D +N +
Sbjct: 93 CDPDCSSVDFSVFSACSVPVVTGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSI 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,568,711
Number of Sequences: 37866
Number of extensions: 279675
Number of successful extensions: 1068
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1044
Number of HSP's gapped (non-prelim): 35
length of query: 234
length of database: 18,247,518
effective HSP length: 99
effective length of query: 135
effective length of database: 14,498,784
effective search space: 1957335840
effective search space used: 1957335840
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.