Guide to the Human Genome
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Name: RNF150 Sequence: fasta or formatted (438aa) NCBI GI: 58331204
Description:

ring finger protein 150

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         37           2
 C cysteine            3.4         15           2
 D aspartate           6.6         29           2
 E glutamate           5.9         26           2
 F phenylalanine       3.4         15           1
 G glycine             5.9         26           4
 H histidine           1.8          8           1
 I isoleucine          7.1         31           2
 K lysine              4.8         21           2
 L leucine             7.5         33           2
 M methionine          2.7         12           1
 N asparagine          4.6         20           1
 P proline             5.3         23           2
 Q glutamine           3.0         13           1
 R arginine            4.6         20           2
 S serine              6.8         30           2
 T threonine           7.1         31           2
 V valine              7.5         33           2
 W tryptophan          1.1          5           1
 Y tyrosine            2.3         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 150 
RNF130                0.407   ring finger protein 130 
RNF149                0.296   ring finger protein 149 
RNF128                0.278   ring finger protein 128 isoform 2 
RNF128                0.271   ring finger protein 128 isoform 1 
RNF133                0.211   ring finger protein 133 
RNF148                0.209   ring finger protein 148 
RNF13                 0.086   ring finger protein 13 
RNF13                 0.086   ring finger protein 13 
ZNRF3                 0.080   zinc and ring finger 3 
RNF167                0.078   ring finger protein 167 
ZNRF4                 0.051   zinc and ring finger 4 
RNF215                0.051   ring finger protein 215 
RNF43                 0.049   ring finger protein 43 
RNF44                 0.047   ring finger protein 44 
RNF24                 0.045   ring finger protein 24 isoform 2 
RNF24                 0.045   ring finger protein 24 isoform 1 
RNF24                 0.045   ring finger protein 24 isoform 1 
RNF38                 0.045   ring finger protein 38 isoform 2 
RNF38                 0.045   ring finger protein 38 isoform 2 
RNF38                 0.045   ring finger protein 38 isoform 3 
RNF38                 0.045   ring finger protein 38 isoform 2 
RNF38                 0.045   ring finger protein 38 isoform 1 
RNF111                0.043   ring finger protein 111 
RNF165                0.043   ring finger protein 165 
RLIM                  0.042   ring finger protein, LIM domain interacting 
RLIM                  0.042   ring finger protein, LIM domain interacting 
RNF115                0.041   Rabring 7 
LOC100290625          0.039   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.039   PREDICTED: hypothetical protein XP_002342853 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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