Guide to the Human Genome
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Name: RNF145 Sequence: fasta or formatted (691aa) NCBI GI: 21389515
Description:

ring finger protein 145

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         46           2
 C cysteine            2.6         18           2
 D aspartate           2.6         18           2
 E glutamate           5.2         36           2
 F phenylalanine       5.8         40           2
 G glycine             4.5         31           1
 H histidine           2.6         18           1
 I isoleucine          5.6         39           3
 K lysine              4.3         30           8
 L leucine            14.9        103           3
 M methionine          3.6         25           2
 N asparagine          3.5         24           2
 P proline             4.1         28           2
 Q glutamine           4.5         31           2
 R arginine            4.1         28           2
 S serine              6.8         47           3
 T threonine           4.1         28           2
 V valine              8.4         58           2
 W tryptophan          1.4         10           1
 Y tyrosine            4.8         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 145 
RNF139                0.153   ring finger protein 139 
AMFR                  0.040   autocrine motility factor receptor 
RNF133                0.029   ring finger protein 133 
SYVN1                 0.028   synoviolin 1 isoform b 
SYVN1                 0.028   synoviolin 1 isoform a 
DZIP3                 0.023   DAZ interacting protein 3, zinc finger 
RNF24                 0.023   ring finger protein 24 isoform 2 
RNF24                 0.023   ring finger protein 24 isoform 1 
RNF24                 0.023   ring finger protein 24 isoform 1 
RNF122                0.021   ring finger protein 122 
RNF148                0.021   ring finger protein 148 
RNF128                0.019   ring finger protein 128 isoform 1 
RNF128                0.019   ring finger protein 128 isoform 2 
RNF13                 0.019   ring finger protein 13 
RNF13                 0.019   ring finger protein 13 
RNF149                0.018   ring finger protein 149 
RNF115                0.018   Rabring 7 
RNFT2                 0.018   transmembrane protein 118 isoform 1 
RNF150                0.018   ring finger protein 150 
RNF44                 0.018   ring finger protein 44 
RNF181                0.018   ring finger protein 181 
RNF167                0.018   ring finger protein 167 
RNF38                 0.017   ring finger protein 38 isoform 2 
RNF38                 0.017   ring finger protein 38 isoform 2 
RNF38                 0.017   ring finger protein 38 isoform 3 
RNF38                 0.017   ring finger protein 38 isoform 2 
RNF38                 0.017   ring finger protein 38 isoform 1 
RNFT1                 0.017   PTD016 protein 
RNF151                0.017   ring finger protein 151 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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