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Search of human proteins with 30181242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30181242 doublecortin isoform b [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30181242 doublecortin isoform b [Homo sapiens] 733 0.0
gi|30181244 doublecortin isoform c [Homo sapiens] 715 0.0
gi|30181240 doublecortin isoform c [Homo sapiens] 715 0.0
gi|30181246 doublecortin isoform a [Homo sapiens] 715 0.0
gi|4758128 doublecortin-like kinase 1 [Homo sapiens] 504 e-143
gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens] 470 e-132
gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens] 469 e-132
gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens] 96 5e-20
gi|117938307 doublecortin domain containing 2 [Homo sapiens] 95 1e-19
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 82 1e-15
gi|239753110 PREDICTED: doublecortin domain-containing protein E... 71 1e-12
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 71 1e-12
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 71 1e-12
gi|150456471 doublecortin domain containing 2B [Homo sapiens] 69 9e-12
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 41 0.001
gi|54792782 C-type lectin domain family 16, member A [Homo sapiens] 38 0.016
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 37 0.021
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 36 0.047
gi|118572603 ubinuclein 1 [Homo sapiens] 35 0.081
gi|118572601 ubinuclein 1 [Homo sapiens] 35 0.081
gi|126116565 MYC binding protein 2 [Homo sapiens] 35 0.081
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 35 0.11
gi|153070260 myristoylated alanine-rich protein kinase C substra... 35 0.11
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 35 0.11
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 35 0.11
gi|54860079 nadrin isoform 1 [Homo sapiens] 35 0.11
gi|54860105 nadrin isoform 2 [Homo sapiens] 35 0.11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.11
gi|91208420 bassoon protein [Homo sapiens] 35 0.14
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 35 0.14
>gi|30181242 doublecortin isoform b [Homo sapiens]
Length = 365
Score = 733 bits (1891), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN
Sbjct: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
Query: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE
Sbjct: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
Query: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK
Sbjct: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
Query: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH
Sbjct: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
Query: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP
Sbjct: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
Query: 301 MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS
Sbjct: 301 MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
Query: 361 LGDSM 365
LGDSM
Sbjct: 361 LGDSM 365
>gi|30181244 doublecortin isoform c [Homo sapiens]
Length = 360
Score = 715 bits (1846), Expect = 0.0
Identities = 360/365 (98%), Positives = 360/365 (98%), Gaps = 5/365 (1%)
Query: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN
Sbjct: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
Query: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE
Sbjct: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
Query: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK
Sbjct: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
Query: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH
Sbjct: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
Query: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP
Sbjct: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
Query: 301 MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
MRRSKSPADS ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS
Sbjct: 301 MRRSKSPADS-----ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 355
Query: 361 LGDSM 365
LGDSM
Sbjct: 356 LGDSM 360
>gi|30181240 doublecortin isoform c [Homo sapiens]
Length = 360
Score = 715 bits (1846), Expect = 0.0
Identities = 360/365 (98%), Positives = 360/365 (98%), Gaps = 5/365 (1%)
Query: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN
Sbjct: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
Query: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE
Sbjct: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
Query: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK
Sbjct: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
Query: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH
Sbjct: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
Query: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP
Sbjct: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
Query: 301 MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
MRRSKSPADS ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS
Sbjct: 301 MRRSKSPADS-----ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 355
Query: 361 LGDSM 365
LGDSM
Sbjct: 356 LGDSM 360
>gi|30181246 doublecortin isoform a [Homo sapiens]
Length = 441
Score = 715 bits (1846), Expect = 0.0
Identities = 360/365 (98%), Positives = 360/365 (98%), Gaps = 5/365 (1%)
Query: 1 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 60
MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN
Sbjct: 82 MELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRN 141
Query: 61 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 120
GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE
Sbjct: 142 GDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELE 201
Query: 121 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 180
EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK
Sbjct: 202 EGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPK 261
Query: 181 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 240
LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH
Sbjct: 262 LVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLH 321
Query: 241 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 300
DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP
Sbjct: 322 DFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGP 381
Query: 301 MRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
MRRSKSPADS ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS
Sbjct: 382 MRRSKSPADS-----ANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 436
Query: 361 LGDSM 365
LGDSM
Sbjct: 437 LGDSM 441
>gi|4758128 doublecortin-like kinase 1 [Homo sapiens]
Length = 729
Score = 504 bits (1299), Expect = e-143
Identities = 253/348 (72%), Positives = 297/348 (85%), Gaps = 10/348 (2%)
Query: 2 ELDFGHFDERDKTSRNMRGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNG 61
+++ HFDERDK R RGSR+NGLPSPTHSAHCSFYRTRTLQ LS+EKKAKKVRFYRNG
Sbjct: 6 DMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNG 65
Query: 62 DRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEE 121
DRYFKGIVYA+S DRFRSF+ALLADLTR+LSDN+NLPQGVR IYTIDG +KI S+D+L E
Sbjct: 66 DRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVE 125
Query: 122 GESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASS--NSAQARENKDFVRP 179
GESYVC S FKK+EYTKNVNPNWSVNVKT++ +A SLA++ + ++ RENKDF+RP
Sbjct: 126 GESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAVSSLATAKGSPSEVRENKDFIRP 185
Query: 180 KLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCL 239
KLVTIIRSGVKPRKAVR+LLNKKTAHSFEQVLTDIT+AIKL++GVVK+LYTLDGKQV CL
Sbjct: 186 KLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCL 245
Query: 240 HDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPG 299
DFFGDDD+FIACGPEKFRY QDDF LDE+ECRV+K +T+ K + + ++++ KSPG
Sbjct: 246 QDFFGDDDIFIACGPEKFRY-QDDFLLDESECRVVK----STSYTKIASSSRRSTTKSPG 300
Query: 300 PMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHK 347
P RRSKSPA + + NGT SQLSTP+S +SP +PTSPGSLRK +
Sbjct: 301 PSRRSKSPASTSS---VNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQR 345
>gi|156713428 doublecortin-like kinase 2 isoform a [Homo sapiens]
Length = 766
Score = 470 bits (1209), Expect = e-132
Identities = 244/362 (67%), Positives = 285/362 (78%), Gaps = 29/362 (8%)
Query: 3 LDFGHFDERDKTSR--------------NMRGSRMNGL-PSPTHSAHCSFYRTRTLQALS 47
++ HF+ERDK R + G + NGL PSP HSAHCSFYRTRTLQALS
Sbjct: 7 IELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALS 66
Query: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTI 107
+EKKAKK RFYRNGDRYFKG+V+A+SSDRFRSFDALL +LTRSLSDN+NLPQGVR IYTI
Sbjct: 67 SEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIELTRSLSDNVNLPQGVRTIYTI 126
Query: 108 DGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNS 167
DGSRK+ S+DEL EGESYVC+S+ F+KV+YTKN+NPNWSVN+K + + ASS
Sbjct: 127 DGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNINPNWSVNIKGGTSRAL--AAASSVK 184
Query: 168 AQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKK 227
++ +E+KDF++PKLVT+IRSGVKPRKAVR+LLNKKTAHSFEQVLTDITEAIKL++GVVK+
Sbjct: 185 SEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKR 244
Query: 228 LYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKAS 287
L TLDGKQVTCL DFFGDDDVFIACGPEKFRYAQDDF LD +ECRV+K + S ++ K S
Sbjct: 245 LCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYS 304
Query: 288 PTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHK 347
+KSPGP RRSKSPA NGT SSQLSTPKS +S S+PTSPGS R K
Sbjct: 305 ------GSKSPGPSRRSKSPA------SVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLK 352
Query: 348 DL 349
+
Sbjct: 353 QI 354
>gi|156713430 doublecortin-like kinase 2 isoform b [Homo sapiens]
Length = 765
Score = 469 bits (1207), Expect = e-132
Identities = 243/357 (68%), Positives = 283/357 (79%), Gaps = 29/357 (8%)
Query: 3 LDFGHFDERDKTSR--------------NMRGSRMNGL-PSPTHSAHCSFYRTRTLQALS 47
++ HF+ERDK R + G + NGL PSP HSAHCSFYRTRTLQALS
Sbjct: 7 IELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALS 66
Query: 48 NEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTI 107
+EKKAKK RFYRNGDRYFKG+V+A+SSDRFRSFDALL +LTRSLSDN+NLPQGVR IYTI
Sbjct: 67 SEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIELTRSLSDNVNLPQGVRTIYTI 126
Query: 108 DGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNS 167
DGSRK+ S+DEL EGESYVC+S+ F+KV+YTKN+NPNWSVN+K + + ASS
Sbjct: 127 DGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNINPNWSVNIKGGTSRAL--AAASSVK 184
Query: 168 AQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKK 227
++ +E+KDF++PKLVT+IRSGVKPRKAVR+LLNKKTAHSFEQVLTDITEAIKL++GVVK+
Sbjct: 185 SEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKR 244
Query: 228 LYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKAS 287
L TLDGKQVTCL DFFGDDDVFIACGPEKFRYAQDDF LD +ECRV+K + S ++ K S
Sbjct: 245 LCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYS 304
Query: 288 PTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLR 344
+KSPGP RRSKSPA NGT SSQLSTPKS +S S+PTSPGS R
Sbjct: 305 ------GSKSPGPSRRSKSPA------SVNGTPSSQLSTPKSTKSSSSSPTSPGSFR 349
>gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]
Length = 2156
Score = 95.9 bits (237), Expect = 5e-20
Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 45 ALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYI 104
+L++ AK++ FY++GD F G+ V+ F+SFDALL +L+R + LP GVR I
Sbjct: 28 SLTHPVVAKRISFYKSGDPQFGGVRVVVNPRSFKSFDALLDNLSRK----VPLPFGVRNI 83
Query: 105 YTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTK-NVNPNWSVNVKTSANMKAPQSLA 163
T G I ++ELE+GESY+CS + V+ K P ++ + + P +A
Sbjct: 84 STPRGRHSITRLEELEDGESYLCSHGRKVQPVDLDKARRRPRPWLSSRAISAHSPPHPVA 143
Query: 164 SSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETG 223
+ R P+ + + R+G P+ VLL+++ SFE L +TE ++
Sbjct: 144 VAAPGMPRP------PRSLVVFRNG-DPKTRRAVLLSRRVTQSFEAFLQHLTEVMQRP-- 194
Query: 224 VVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
V KLY DG++V L +A G E F+
Sbjct: 195 -VVKLYATDGRRVPSLQAVILSSGAVVAAGREPFK 228
>gi|117938307 doublecortin domain containing 2 [Homo sapiens]
Length = 476
Score = 94.7 bits (234), Expect = 1e-19
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 32/282 (11%)
Query: 53 KKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQG-VRYIYTIDGSR 111
K V YRNGD ++ G + + SF+ L ++T + P G VR IYT
Sbjct: 17 KSVLVYRNGDPFYAGRRVVIHEKKVSSFEVFLKEVT----GGVQAPFGAVRNIYTPRTGH 72
Query: 112 KIGSMDELEEGESYVCSSDNFFKKVEYTK----NVNPNWSVNVKTSANMKAPQSLASSNS 167
+I +D+++ G +YV FKK+ Y P VN + + S +
Sbjct: 73 RIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTEVKP------VIHSRIN 126
Query: 168 AQARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKK 227
AR K P + +I +G A R+L+ +KT + ++ VL +TE I L +G V +
Sbjct: 127 VSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTLNQWDHVLQMVTEKITLRSGAVHR 186
Query: 228 LYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKAS 287
LYTL+GK V + + ++A G +KF+ L +E K G KAS
Sbjct: 187 LYTLEGKLVESGAE-LENGQFYVAVGRDKFK------KLPYSELLFDKSTMRRPFGQKAS 239
Query: 288 PTPQKTSAKSPGPMRRSKSPADSGNDQDANGT-SSSQLSTPK 328
P P+ S+ SGND+ + T SS S+P+
Sbjct: 240 SLP---------PIVGSRKSKGSGNDRHSKSTVGSSDNSSPQ 272
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 81.6 bits (200), Expect = 1e-15
Identities = 86/358 (24%), Positives = 144/358 (40%), Gaps = 48/358 (13%)
Query: 23 MNGLP----SPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
MN P +P+H C +++ AKK+ F + GD F G+ AV F+
Sbjct: 1 MNSTPRNAQAPSHR-ECFLPSVARTPSVTKVTPAKKITFLKRGDPRFAGVRLAVHQRAFK 59
Query: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
+F AL+ + LS + L GVR + T G + ++++LE+G Y+CS KK
Sbjct: 60 TFSALMDE----LSQRVPLSFGVRSVTTPRGLHSLSALEQLEDGGCYLCSD----KKPPK 111
Query: 139 T-------KNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKP 191
T + NP +AP + +S S + P+ + +I++ + P
Sbjct: 112 TPSGPGRPQERNPTAQQLRDVEGQREAPGTSSSRKSLKT--------PRRILLIKN-MDP 162
Query: 192 RKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIA 251
R V+L+ + + L ++ ++ VK+LYT GK+V L V +
Sbjct: 163 RLQQTVVLSHRNTRNLAAFLGKASDLLRFP---VKQLYTTSGKKVDSLQALLHSPSVLVC 219
Query: 252 CGPEKFRYAQDDFSLDENECRVMKG----NPSATAGPKASPTPQKTSAKSPGPMRRSKSP 307
G E FR + +E + G N + + GPK P+ + S+SP
Sbjct: 220 AGHEAFRTPAMK-NARRSEAETLSGLTSRNKNGSWGPKTKPS-----------VIHSRSP 267
Query: 308 ADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDSLGDSM 365
S S+ P + P TP G L D+ + +++ SL M
Sbjct: 268 PGSTPRLPERPGPSNPPVGPAPGRHPQDTPAQSGPLVAGDDMKKKVRMNEDGSLSVEM 325
>gi|239753110 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 530
Score = 71.2 bits (173), Expect = 1e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 52 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 111
Query: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 112 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 167
Query: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
++ P ++ +K P N + + + + + +G +++
Sbjct: 168 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 224
Query: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 225 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 282
Query: 259 Y 259
Y
Sbjct: 283 Y 283
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 71.2 bits (173), Expect = 1e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
Query: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
Query: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
++ P ++ +K P N + + + + + +G +++
Sbjct: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
Query: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
Query: 259 Y 259
Y
Sbjct: 389 Y 389
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 71.2 bits (173), Expect = 1e-12
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 19 RGSRMNGLPSPTHSAHCSFYRTRTLQALSNEKKAKKVRFYRNGDRYFKGIVYAVSSDRFR 78
R R L +P + TR A + AK + YRNGD ++ G + +S R
Sbjct: 158 RCPRCRSLSAPASEERGAAMGTRGPSAPVDTTPAKTIVVYRNGDPFYVGKKFVLSRRRAA 217
Query: 79 SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEY 138
+F+ALL LT + +++P GVR ++T ++ +D L+ G YV + FK+++Y
Sbjct: 218 TFEALLEQLT----EQVDVPFGVRRLFTPTRGHRVLGLDALQAGGKYVAAGRERFKELDY 273
Query: 139 TKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRSGVKPRKAVRVL 198
++ P ++ +K P N + + + + + +G +++
Sbjct: 274 I-HIVPRKPAKIRKLKEIK-PVVHCDINVPSKWQTYHRI-SRHINVFTNGRLFIPPAKII 330
Query: 199 LNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFR 258
+ K + ++ VL I E + G V+KL+T++G + D D+ ++A G E F+
Sbjct: 331 IPKFSLSDWDIVLATIGEKV-FPLGGVRKLFTMNGHLLGDSKD-LQDNHFYVAVGLETFK 388
Query: 259 Y 259
Y
Sbjct: 389 Y 389
>gi|150456471 doublecortin domain containing 2B [Homo sapiens]
Length = 349
Score = 68.6 bits (166), Expect = 9e-12
Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 25/294 (8%)
Query: 52 AKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDGSR 111
AK+V YRNGD +F G V+ RF + +A L ++T + + P VR +YT
Sbjct: 8 AKRVVVYRNGDPFFPGSQLVVTQRRFPTMEAFLCEVTSA----VQAPLAVRALYTPCHGH 63
Query: 112 KIGSMDELEEGESYVCSSDNFFKKVEYT--KNVNPNWSVNVKTSANMKAPQSLASSNSAQ 169
+ ++ +L+ YV + F K+ Y + +P S ++ P
Sbjct: 64 PVTNLADLKNRGQYVAAGFERFHKLHYLPHRGKDPGGK-----SCRLQGPPVTRHLCDGA 118
Query: 170 ARENKDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLY 229
P + + R+G + L++ + +E VL +TE +KL++G V KL
Sbjct: 119 IGRQLPAGAPSYIHVFRNGDLVSPPFSLKLSQAASQDWETVLKLLTEKVKLQSGAVCKLC 178
Query: 230 TLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAG----PK 285
TL+G ++ + ++A G ++F+ D ++ +PS G P
Sbjct: 179 TLEGLPLSAGKELV-TGHYYVAVGEDEFK--------DLPYLELLVPSPSLPRGCWQPPG 229
Query: 286 ASPTPQKTSAKSPGPMRRSKSPADSGN-DQDANGTSSSQLSTPKSKQSPISTPT 338
+ P + A+ SP + A Q P+SK +S P+
Sbjct: 230 SKSRPHRQGAQGHRAQVTQPSPKEPDRIKPSAFYARPQQTIQPRSKLPTLSFPS 283
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 41.2 bits (95), Expect = 0.001
Identities = 65/278 (23%), Positives = 103/278 (37%), Gaps = 33/278 (11%)
Query: 95 INLPQGVRYIYTIDGSRKIGSMDELEEGESYVCSSDNFFKKVEYTKNVNPNWSVNVKTSA 154
+ LP G + S S D+ +E + KK K V P +
Sbjct: 112 VGLPPGKAAAKASESSSSEESSDDDDEEDQ---------KKQPVQKGVKPQ--AKAAKAP 160
Query: 155 NMKAPQSLASSNSAQARENKDFVRPKLVTII-----RSGVKPRKAVRVLLNKKTAHSFEQ 209
KA S + S+S+ E +PK+ + ++ KP +A + N K A S
Sbjct: 161 PKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSS 220
Query: 210 VLTDIT-EAIKLETGVVKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDE 268
+ + + + E T+ KQV V A P + + +D S DE
Sbjct: 221 SSSSSSSDDSEEEKAAATPKKTVPKKQVVA------KAPVKAATTPTRKSSSSEDSSSDE 274
Query: 269 NE--CRVMKGNPS--ATAGPKASPTPQKTSAKSPGPMRRSKS-PADSGND-QDANGTSSS 322
E + MK P ++ P ++P P+K+ P K P +S D D + +SS
Sbjct: 275 EEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSE 334
Query: 323 QLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDSDS 360
+ P +K T P +K + S D SDS
Sbjct: 335 EEKKPPTKAVVSKATTKPPPAKKAAE----SSSDSSDS 368
>gi|54792782 C-type lectin domain family 16, member A [Homo sapiens]
Length = 1053
Score = 37.7 bits (86), Expect = 0.016
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 294 SAKSPGPMRRSKSPADSGNDQ--DANGTSSSQLSTPKSKQSPISTPTSPGSLRKH 346
S S P S SP+ SG+ D+ GTSSS STP + QSP P SP + H
Sbjct: 895 SLSSQSPPSASGSPSGSGSTSHCDSGGTSSS--STPSTAQSPADAPMSPELPKPH 947
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 37.4 bits (85), Expect = 0.021
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 247 DVFIACGPEKFRYAQDDFSLDENECRVMKGNPSA---TAGPKASPTPQKTSAKSPGPMRR 303
+ I G E + + Q DFS DE+ + + A + G ASP+ K S +SP P+
Sbjct: 168 EAIIGVGKEDYPHTQGDFSFDEDSSDALSPDQPASQESQGSAASPSEPKVS-ESPSPV-T 225
Query: 304 SKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPTSP 340
+ +PA + + T L TP + P P +P
Sbjct: 226 TNTPAQFAS---VSPTVPEFLKTPPTADQPPPRPAAP 259
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 36.2 bits (82), Expect = 0.047
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 247 DVFIACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPGPMRRSKS 306
D+ A GP+ + Q ++D ++ N + ++ +ASPT S SP +RS S
Sbjct: 3471 DLDSASGPQVSNFTQ---TVDAPNSMGLEQNKALSSAVQASPTSPGGSPSSPSSGQRSAS 3527
Query: 307 PADSGNDQDANGTSSSQLSTPKSKQSPISTPTSPGSLRKHKDLYLPLSLDDS 358
P+ G + PK K P G+ +KHK +L S ++
Sbjct: 3528 PSVPGP------------TKPKPKTKRFQLPLDKGNGKKHKVSHLRTSSSEA 3567
>gi|118572603 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 35.4 bits (80), Expect = 0.081
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 283 GPKASPTP--------QKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPI 334
GPKASPT KT+AK G +PA SG + +SSS TP S S +
Sbjct: 829 GPKASPTQCHRSLLQLVKTAAKGQG--FHPSAPATSGG---LSASSSSSHKTPASSSSAL 883
Query: 335 STPTSPGSL 343
S P P S+
Sbjct: 884 SHPAKPHSV 892
>gi|118572601 ubinuclein 1 [Homo sapiens]
Length = 1134
Score = 35.4 bits (80), Expect = 0.081
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 283 GPKASPTP--------QKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPI 334
GPKASPT KT+AK G +PA SG + +SSS TP S S +
Sbjct: 829 GPKASPTQCHRSLLQLVKTAAKGQG--FHPSAPATSGG---LSASSSSSHKTPASSSSAL 883
Query: 335 STPTSPGSL 343
S P P S+
Sbjct: 884 SHPAKPHSV 892
>gi|126116565 MYC binding protein 2 [Homo sapiens]
Length = 4640
Score = 35.4 bits (80), Expect = 0.081
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 276 GNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPIS 335
G S + PK P S+ S RS SP D Q + ++L P+ + S
Sbjct: 2776 GPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPRERSKSDS 2835
Query: 336 TPTSPGSLRKHK 347
P +LRK K
Sbjct: 2836 YTLDPDTLRKKK 2847
Score = 33.5 bits (75), Expect = 0.31
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 290 PQKTSAKSPGPMRRSKSPADS---GNDQDANGTSSSQLSTPKSKQ------SPISTPTSP 340
P + A+SPGP R SP N +G SS + S+P K +P+ T P
Sbjct: 2767 PSSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDP 2826
Query: 341 GSLRKHKDLY 350
R D Y
Sbjct: 2827 PRERSKSDSY 2836
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.0 bits (79), Expect = 0.11
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 280 ATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQD---ANGTSSSQLSTPKSKQSPIST 336
AT P SP PQ T+A P P + +P S + A T S+ P S +P T
Sbjct: 152 ATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPET 211
Query: 337 PTSP 340
+P
Sbjct: 212 TAAP 215
Score = 33.1 bits (74), Expect = 0.40
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTS---SSQLSTPKSKQSP- 333
PS++A P+ + P SA +P P+ S P + + T+ SS + P++ +P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 334 ---ISTPTSPGSLRKHKDLYLPLSLDDS 358
+TP P S + P++ +S
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNS 313
Score = 28.9 bits (63), Expect = 7.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTP 337
PS++A P+ + P A +P P S P + + T+ + LS+ ++ P
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 338 T 338
T
Sbjct: 263 T 263
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 35.0 bits (79), Expect = 0.11
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPI 334
KG P+A A P+A +P + A + G SP + + +++S S+PK++
Sbjct: 87 KGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEA---ASAASSTSSPKAEDGAT 143
Query: 335 STPTSPGSLRKHK 347
+P++ +K K
Sbjct: 144 PSPSNETPKKKKK 156
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.0 bits (79), Expect = 0.11
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 280 ATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQD---ANGTSSSQLSTPKSKQSPIST 336
AT P SP PQ T+A P P + +P S + A T S+ P S +P T
Sbjct: 152 ATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPET 211
Query: 337 PTSP 340
+P
Sbjct: 212 TAAP 215
Score = 33.1 bits (74), Expect = 0.40
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTS---SSQLSTPKSKQSP- 333
PS++A P+ + P SA +P P+ S P + + T+ SS + P++ +P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 334 ---ISTPTSPGSLRKHKDLYLPLSLDDS 358
+TP P S + P++ +S
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNS 313
Score = 28.9 bits (63), Expect = 7.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTP 337
PS++A P+ + P A +P P S P + + T+ + LS+ ++ P
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 338 T 338
T
Sbjct: 263 T 263
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 35.0 bits (79), Expect = 0.11
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 280 ATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQD---ANGTSSSQLSTPKSKQSPIST 336
AT P SP PQ T+A P P + +P S + A T S+ P S +P T
Sbjct: 152 ATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPET 211
Query: 337 PTSP 340
+P
Sbjct: 212 TAAP 215
Score = 33.1 bits (74), Expect = 0.40
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTS---SSQLSTPKSKQSP- 333
PS++A P+ + P SA +P P+ S P + + T+ SS + P++ +P
Sbjct: 226 PSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 334 ---ISTPTSPGSLRKHKDLYLPLSLDDS 358
+TP P S + P++ +S
Sbjct: 286 TPSATTPAPPSSPAPQETTAAPITTPNS 313
Score = 28.9 bits (63), Expect = 7.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTP 337
PS++A P+ + P A +P P S P + + T+ + LS+ ++ P
Sbjct: 203 PSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPP 262
Query: 338 T 338
T
Sbjct: 263 T 263
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 35.0 bits (79), Expect = 0.11
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSS-SQLSTPK---SKQSP 333
P G +S T Q + SP P RS SP Q S+ SQLS P+ S SP
Sbjct: 648 PGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSP 707
Query: 334 ISTPTSP 340
I P P
Sbjct: 708 IQAPNHP 714
Score = 28.5 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 276 GNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPIS 335
G P AGP + +P P + P Q ++GTS S S + P
Sbjct: 616 GQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSL--SPKPPTR 673
Query: 336 TPTSP 340
+P+ P
Sbjct: 674 SPSPP 678
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 35.0 bits (79), Expect = 0.11
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 278 PSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSS-SQLSTPK---SKQSP 333
P G +S T Q + SP P RS SP Q S+ SQLS P+ S SP
Sbjct: 570 PGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSP 629
Query: 334 ISTPTSP 340
I P P
Sbjct: 630 IQAPNHP 636
Score = 28.5 bits (62), Expect = 9.9
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 276 GNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPIS 335
G P AGP + +P P + P Q ++GTS S S + P
Sbjct: 538 GQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSL--SPKPPTR 595
Query: 336 TPTSP 340
+P+ P
Sbjct: 596 SPSPP 600
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.0 bits (79), Expect = 0.11
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 15/85 (17%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSG-------NDQDANGTSSSQLSTP 327
KG P AT+ PK +PTP +A P P +P G GT + +TP
Sbjct: 1298 KGGP-ATSPPKGAPTP--PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354
Query: 328 KSKQSPIST-----PTSPGSLRKHK 347
SK P + PT P + HK
Sbjct: 1355 SSKGGPTTPSSKEGPTPPAATPSHK 1379
Score = 33.5 bits (75), Expect = 0.31
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQ------LSTPK 328
KG+P T PK +PTP + P P PA + + + T SS+ +TP
Sbjct: 1321 KGSPG-TPPPKGAPTPPAVTP--PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377
Query: 329 SKQSPISTPTSP 340
K P TP SP
Sbjct: 1378 HKGGPAMTPPSP 1389
Score = 33.1 bits (74), Expect = 0.40
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 15/76 (19%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPK------ 328
KG+P+AT PK + TP + SP SPA + + A T ++ L +PK
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSP-----KGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Query: 329 ----SKQSPISTPTSP 340
+ P +TP SP
Sbjct: 1075 SLKGAPTPPAATPPSP 1090
Score = 32.3 bits (72), Expect = 0.69
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSP--GPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQS 332
KG P AT PK +PTP + SP GP S A + S +TP K +
Sbjct: 974 KGGP-ATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGA 1032
Query: 333 ---PISTPTSP 340
P +TP SP
Sbjct: 1033 STPPAATPPSP 1043
Score = 30.8 bits (68), Expect = 2.0
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSP--GPMRRS------------KSPADSGNDQDANGTS 320
KG+P+AT PK +PT + SP GP S SP G
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 321 SSQLSTPKSKQSPISTPTSPGS 342
+TP S + ++TP G+
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGA 1125
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPI 334
KG P AT PK +PTP +A P P +P+ G T S P + SP
Sbjct: 951 KGGP-ATPSPKWAPTP--PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGP-ATPSPK 1006
Query: 335 STPTSP 340
PT P
Sbjct: 1007 GAPTPP 1012
Score = 28.9 bits (63), Expect = 7.6
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 276 GNPSATAGPKASPTPQK-------TSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPK 328
G P T P SP PQ+ ++ P P + +P + Q ++GT+ + P+
Sbjct: 39 GQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPE 98
Query: 329 SK---QSPISTPTSPGSLRKHKDLYLP 352
+ + I P SP +L + P
Sbjct: 99 APTFLPNLIGPPISPAALALASPMIAP 125
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 286 ASPTPQKTSAKSPGPMRRSKSPADSGNDQDANG---TSSSQLSTPKSKQSPI------ST 336
ASPTP++ SA +PG ++ A Q+A+G T T +S +SP ST
Sbjct: 92 ASPTPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRSGRSPSVSPDRGST 151
Query: 337 PTSPGSL 343
PTSP S+
Sbjct: 152 PTSPYSV 158
Score = 28.5 bits (62), Expect = 9.9
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 275 KGNPSATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPI 334
K +P +T KASP P K S ++ P+R S+ P+ + + T + P K P
Sbjct: 571 KASPLST---KASPLPSKASPQAK-PLRASE-PSKTPSSVQEKKTRVPTKAEPMPKPPPE 625
Query: 335 STPT 338
+TPT
Sbjct: 626 TTPT 629
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 34.7 bits (78), Expect = 0.14
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 279 SATAGPKASPTPQKTSAKSPGPMRRSKSPADSGNDQDANGTSSSQLSTPKSKQSPISTPT 338
S +A + P+P + S S G + S +PA D D + S + ST S S +S+P
Sbjct: 1641 SYSAKRQPMPSPSEGSLSSGGMDQGSDAPA---RDFDGEDSDSPRHST-ASNSSNLSSPP 1696
Query: 339 SPGSLRKHKDLYL 351
SP S RK K L L
Sbjct: 1697 SPASPRKTKSLSL 1709
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,359,321
Number of Sequences: 37866
Number of extensions: 678717
Number of successful extensions: 4555
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 3921
Number of HSP's gapped (non-prelim): 784
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.