CLEC16A 32756

Name: CLEC16A	Sequence: fasta or formatted (1053aa)		NCBI GI: 54792782
Description: C-type lectin domain family 16, member A		Referenced in: Lectin Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 65 3 C cysteine 1.6 17 1 D aspartate 5.9 62 3 E glutamate 7.0 74 3 F phenylalanine 3.8 40 2 G glycine 4.7 50 3 H histidine 3.3 35 2 I isoleucine 5.4 57 2 K lysine 4.8 51 1 L leucine 11.2 118 3 M methionine 2.8 29 2 N asparagine 4.2 44 2 P proline 5.4 57 2 Q glutamine 3.8 40 2 R arginine 4.9 52 2 S serine 9.3 98 4 T threonine 6.1 64 2 V valine 6.4 67 2 W tryptophan 0.5 5 1 Y tyrosine 2.7 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 C-type lectin domain family 16, member A MUC17 0.011 mucin 17 SRRM2 0.011 splicing coactivator subunit SRm300 NACA 0.010 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 LOC100134138 0.009 PREDICTED: similar to mucin, partial MUC7 0.008 mucin 7, secreted precursor MUC2 0.008 mucin 2 precursor MUC12 0.008 PREDICTED: mucin 12 MUC12 0.008 PREDICTED: mucin 12, cell surface associated MUC7 0.008 mucin 7, secreted precursor MUC7 0.008 mucin 7, secreted precursor SYN2 0.008 synapsin II isoform IIa LDB3 0.007 LIM domain binding 3 isoform 1 LOC100128719 0.007 PREDICTED: hypothetical protein, partial LOC100128719 0.007 PREDICTED: hypothetical protein, partial FLJ22184 0.007 PREDICTED: hypothetical protein LOC80164 SRCAP 0.007 Snf2-related CBP activator protein TNRC18 0.007 trinucleotide repeat containing 18 AFF2 0.007 fragile X mental retardation 2 C2CD2L 0.007 transmembrane protein 24 LOC100133714 0.007 PREDICTED: similar to Mucin-12, partial CDSN 0.007 corneodesmosin precursor MLLT3 0.007 myeloid/lymphoid or mixed-lineage leukemia (trithor... SEC24C 0.007 SEC24-related protein C SEC24C 0.007 SEC24-related protein C OVOL2 0.007 zinc finger protein 339 BAT2D1 0.007 HBxAg transactivated protein 2 MUC5B 0.007 mucin 5, subtype B, tracheobronchial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.