Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PILRA Sequence: fasta or formatted (175aa) NCBI GI: 30179907
Description:

paired immunoglobulin-like type 2 receptor alpha isoform 3 precursor

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [230aa] paired immunoglobulin-like type 2 receptor alpha isoform 2 precursor
alt prot [303aa] paired immunoglobulin-like type 2 receptor alpha isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.3          4           1
 C cysteine            0.6          1           1
 D aspartate           2.9          5           1
 E glutamate           2.9          5           1
 F phenylalanine       4.6          8           1
 G glycine             8.0         14           2
 H histidine           2.9          5           1
 I isoleucine          5.1          9           1
 K lysine              4.6          8           1
 L leucine            10.3         18           3
 M methionine          2.3          4           1
 N asparagine          2.3          4           1
 P proline             8.6         15           2
 Q glutamine           7.4         13           2
 R arginine            7.4         13           2
 S serine             13.1         23           2
 T threonine           5.1          9           1
 V valine              3.4          6           1
 W tryptophan          2.3          4           1
 Y tyrosine            4.0          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paired immunoglobulin-like type 2 receptor alpha iso... 
PILRA                 0.873   paired immunoglobulin-like type 2 receptor alpha iso...
PILRA                 0.867   paired immunoglobulin-like type 2 receptor alpha iso...
PILRB                 0.772   paired immunoglobulin-like type 2 receptor beta isof...
PILRB                 0.772   paired immunoglobulin-like type 2 receptor beta isof...
PILRB                 0.044   paired immunoglobulin-like type 2 receptor beta isof...
SIGLEC5               0.038   sialic acid binding Ig-like lectin 5 
SIGLEC14              0.038   sialic acid binding Ig-like lectin 14 
SIGLEC15              0.030   sialic acid binding Ig-like lectin 15 
VPREB1                0.024   immunoglobulin iota chain precursor 
SIGLEC11              0.021   sialic acid binding Ig-like lectin 11 isoform 2 [Ho...
SIGLEC11              0.021   sialic acid binding Ig-like lectin 11 isoform 1 [Ho...
IGSF9                 0.021   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9                 0.021   immunoglobulin superfamily, member 9 isoform b [Hom...
CD79A                 0.015   CD79A antigen isoform 1 precursor 
KCNH7                 0.015   potassium voltage-gated channel, subfamily H, member...
KCNH7                 0.015   potassium voltage-gated channel, subfamily H, member...
ROBO2                 0.015   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.015   roundabout, axon guidance receptor, homolog 2 isofor...
CDK5RAP1              0.015   CDK5 regulatory subunit associated protein 1 isoform...
CDK5RAP1              0.015   CDK5 regulatory subunit associated protein 1 isoform...
TYRO3                 0.012   TYRO3 protein tyrosine kinase 
LOC100293211          0.012   PREDICTED: similar to hCG2042717 
LOC100293440          0.012   PREDICTED: similar to Ig lambda chain 
CD48                  0.009   CD48 molecule 
NPTN                  0.009   neuroplastin isoform c precursor 
NPTN                  0.009   neuroplastin isoform b precursor 
LOC100288635          0.009   PREDICTED: hypothetical protein 
LOC100288635          0.009   PREDICTED: hypothetical protein XP_002343184 
SLAMF7                0.009   SLAM family member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press