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Search of human proteins with 29788778
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29788778 proline rich membrane anchor 1 precursor [Homo
sapiens]
(153 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29788778 proline rich membrane anchor 1 precursor [Homo sapiens] 330 3e-91
gi|47132519 Ras association and pleckstrin homology domains 1 is... 47 5e-06
gi|52485606 formin-like 2 [Homo sapiens] 47 6e-06
gi|60460889 Myb protein P42POP [Homo sapiens] 47 6e-06
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 47 8e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 46 1e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 46 1e-05
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 46 1e-05
gi|157168329 formin 1 [Homo sapiens] 46 1e-05
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 45 2e-05
gi|116256475 zinc finger protein 827 [Homo sapiens] 45 3e-05
gi|120587019 zinc finger protein 318 [Homo sapiens] 44 4e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 44 5e-05
gi|13273315 homeobox B4 [Homo sapiens] 44 5e-05
gi|122937271 WAS protein homolog associated with actin, golgi me... 44 7e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 43 9e-05
gi|7706687 Enah/Vasp-like [Homo sapiens] 43 9e-05
gi|4557329 fas ligand [Homo sapiens] 43 1e-04
gi|149944526 additional sex combs like 3 [Homo sapiens] 42 2e-04
gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 2e-04
gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 2e-04
gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens] 42 2e-04
gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens] 42 2e-04
gi|182765442 homeobox A10 isoform a [Homo sapiens] 42 3e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 42 3e-04
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 42 3e-04
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 42 3e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 42 3e-04
gi|210032580 SET domain containing 1B [Homo sapiens] 42 3e-04
gi|40807465 zinc finger protein 341 [Homo sapiens] 42 3e-04
>gi|29788778 proline rich membrane anchor 1 precursor [Homo sapiens]
Length = 153
Score = 330 bits (846), Expect = 3e-91
Identities = 153/153 (100%), Positives = 153/153 (100%)
Query: 1 MLLRDLVLRRGCCWSSLLLHCALHPLWGFVQVTHGEPQKSCSKVTDSCRHVCQCRPPPPL 60
MLLRDLVLRRGCCWSSLLLHCALHPLWGFVQVTHGEPQKSCSKVTDSCRHVCQCRPPPPL
Sbjct: 1 MLLRDLVLRRGCCWSSLLLHCALHPLWGFVQVTHGEPQKSCSKVTDSCRHVCQCRPPPPL 60
Query: 61 PPPPPPPPPPRLLSAPAPNSTSCPTEESWWSGLVIIIAVCCASLVFLTVLVIICYKAIKR 120
PPPPPPPPPPRLLSAPAPNSTSCPTEESWWSGLVIIIAVCCASLVFLTVLVIICYKAIKR
Sbjct: 61 PPPPPPPPPPRLLSAPAPNSTSCPTEESWWSGLVIIIAVCCASLVFLTVLVIICYKAIKR 120
Query: 121 KPLRKDENGTSVAEYPMSASQSNKGVDVNNAVV 153
KPLRKDENGTSVAEYPMSASQSNKGVDVNNAVV
Sbjct: 121 KPLRKDENGTSVAEYPMSASQSNKGVDVNNAVV 153
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 47.4 bits (111), Expect = 5e-06
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPP PPPPPPPPPP L S AP++ S
Sbjct: 633 PPPPPPPPPPPPPPPPLPSQSAPSAGS 659
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPP PPPPPPPPP SAP+ S +
Sbjct: 635 PPPPPPPPPPPPPPLPSQSAPSAGSAA 661
Score = 42.4 bits (98), Expect = 2e-04
Identities = 16/24 (66%), Positives = 17/24 (70%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAP 78
+P PPLPPPPPPPPPP P P
Sbjct: 623 QPSPPLPPPPPPPPPPPPPPPPPP 646
Score = 42.0 bits (97), Expect = 2e-04
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPP PPPPPPPPPP P+ ++ S
Sbjct: 630 PPPPPPPPPPPPPPPPPPPLPSQSAPS 656
Score = 41.2 bits (95), Expect = 3e-04
Identities = 19/32 (59%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PPP PPPPPPPPPP P P S S P+ S
Sbjct: 629 PPPPPPPPPPPPPPPPPPPPLP-SQSAPSAGS 659
Score = 39.7 bits (91), Expect = 0.001
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Query: 49 RHVCQCRPPPPLPPPP-----PPPPPPR-LLSAPAPNST 81
+H+ Q PP P PPPP PP PP+ L++ PAP ST
Sbjct: 753 QHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTST 791
Score = 38.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PPPP P P PPPPP ++P P+ + P +++
Sbjct: 928 PPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKT 960
Score = 35.8 bits (81), Expect = 0.015
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Query: 56 PPPPLPPPPPPPPPPRLLSA-----PAPNSTSCP 84
P +PPPPPPPPPP SA PAP + S P
Sbjct: 705 PNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLP 738
Score = 35.4 bits (80), Expect = 0.019
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Query: 56 PPPPLPPPPP------PPPPPRLLSA--PAPNSTSCPTEE 87
P P PPPPP PPPPP + A P P T+ PT +
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPD 951
Score = 28.5 bits (62), Expect = 2.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 51 VCQCRPPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
V Q PP P PP PP P ++ P S P
Sbjct: 798 VTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTP 831
Score = 28.1 bits (61), Expect = 3.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNS 80
P P P PPPPP L+ P P S
Sbjct: 910 PVPSPDFPPPPPESSLVFPPPPPS 933
Score = 27.7 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
P PP+P PPP P + A P S P
Sbjct: 829 PTPPVPVPPPTLPKQQSFCAKPPPSPLSP 857
Score = 27.3 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PPPP PPPP P + AP
Sbjct: 640 PPPPPPPPPLPSQSAPSAGSAAP 662
Score = 27.3 bits (59), Expect = 5.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPA--PNSTSCP 84
P PP PPPP P P +P + TS P
Sbjct: 936 PAPPPPPPPTASPTPDKSGSPGKKTSKTSSP 966
Score = 26.9 bits (58), Expect = 6.8
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 11/36 (30%)
Query: 52 CQCRPPPPLPPPP-----------PPPPPPRLLSAP 76
C PP PL P P PPP PP + S P
Sbjct: 847 CAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQP 882
Score = 26.6 bits (57), Expect = 8.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 57 PPPLPPPPPPPPPPRL 72
PP P PP P PPP L
Sbjct: 825 PPSPPTPPVPVPPPTL 840
Score = 26.6 bits (57), Expect = 8.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 58 PPLPPPPPPPPPPRLL 73
PP PP PP P PP L
Sbjct: 825 PPSPPTPPVPVPPPTL 840
Score = 26.6 bits (57), Expect = 8.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 56 PPPPLPPPPPPPP 68
P PP PP P PPP
Sbjct: 826 PSPPTPPVPVPPP 838
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 47.0 bits (110), Expect = 6e-06
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPPPPPPPP L PA + P
Sbjct: 557 PPPPPPPPPPPPPPPPPLPGPAAETVPAP 585
Score = 44.7 bits (104), Expect = 3e-05
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPPPPPPPP P P + + P
Sbjct: 555 PPPPPPPPPPPPPPPPPPPLPGPAAETVP 583
Score = 42.4 bits (98), Expect = 2e-04
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PPPP PPPPPPPPPP P P
Sbjct: 553 PPPPPPPPPPPPPPPPPPPPPLP 575
Score = 39.3 bits (90), Expect = 0.001
Identities = 21/44 (47%), Positives = 21/44 (47%), Gaps = 14/44 (31%)
Query: 56 PPPPLPPPPPPPP--------------PPRLLSAPAPNSTSCPT 85
PPPP PPPPPPPP P L SAP TS PT
Sbjct: 561 PPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSPT 604
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/23 (65%), Positives = 15/23 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PP P PPPPPPPPPP P P
Sbjct: 550 PPMPPPPPPPPPPPPPPPPPPPP 572
Score = 38.9 bits (89), Expect = 0.002
Identities = 15/23 (65%), Positives = 15/23 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
P PP PPPPPPPPPP P P
Sbjct: 551 PMPPPPPPPPPPPPPPPPPPPPP 573
Score = 37.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PP PPPPPPPPPP P P P E+
Sbjct: 550 PPMPPPPPPPPPPPPPPPPPPPPPLPGPAAET 581
Score = 34.3 bits (77), Expect = 0.043
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 18/47 (38%)
Query: 56 PPPPLPP------------------PPPPPPPPRLLSAPAPNSTSCP 84
PPPPLPP PPPPPPPP P P P
Sbjct: 529 PPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPLP 575
Score = 29.3 bits (64), Expect = 1.4
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 59 PLPPPPPPPPP 69
PLPPPPPP PP
Sbjct: 525 PLPPPPPPLPP 535
Score = 26.6 bits (57), Expect = 8.9
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 20/43 (46%)
Query: 56 PPPPLPPP--------------------PPPPPPPRLLSAPAP 78
P PP PPP PPPPPPP P P
Sbjct: 525 PLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPP 567
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 47.0 bits (110), Expect = 6e-06
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 57 PPPLPPPPPPPPPPR-LLSAPAPNSTSCP 84
PPPLPPPPPPPPPPR +L PAP P
Sbjct: 307 PPPLPPPPPPPPPPRPVLPPPAPKVEITP 335
Score = 35.8 bits (81), Expect = 0.015
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PP PPPPP ++ AP+P S P
Sbjct: 220 PPPPAPPLPPPPPLAQV--APSPPSPPPP 246
Score = 35.8 bits (81), Expect = 0.015
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 7/31 (22%)
Query: 56 PPPPL-------PPPPPPPPPPRLLSAPAPN 79
PPPPL P PPPPP PP LSA P+
Sbjct: 229 PPPPLAQVAPSPPSPPPPPRPPPTLSASDPS 259
Score = 35.4 bits (80), Expect = 0.019
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 51 VCQCRPPPPLPPPPPPPPPPRLLSAPA 77
+ Q P PP PPPPP PPP S P+
Sbjct: 233 LAQVAPSPPSPPPPPRPPPTLSASDPS 259
Score = 32.7 bits (73), Expect = 0.12
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Query: 56 PPPPLPPPPP-------PPPPPRLLSAPAPNSTSCPT 85
P PPLPPPPP PP PP P S S P+
Sbjct: 223 PAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSASDPS 259
Score = 32.0 bits (71), Expect = 0.21
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNS 80
PPPP P P PPP P++ P P S
Sbjct: 315 PPPPPPRPVLPPPAPKVEITPEPVS 339
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 46.6 bits (109), Expect = 8e-06
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP----TEESWWSGL 93
PPPPLPPPPPPPPPP P P + P T+ WS L
Sbjct: 247 PPPPLPPPPPPPPPP---PPPLPGLATSPPFQLTKPGLWSTL 285
Score = 34.7 bits (78), Expect = 0.033
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 58 PPLPPPPPPPPPPRLLSAPAP 78
PP P PPPPP PRLL P P
Sbjct: 462 PPGPSSPPPPPCPRLLRPPPP 482
Score = 33.9 bits (76), Expect = 0.056
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 56 PPP--PLPPPPPPPPPPRLLSAPA 77
PPP P PPPPPPP P LL + A
Sbjct: 785 PPPSQPQPPPPPPPSPASLLKSLA 808
Score = 33.5 bits (75), Expect = 0.073
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 15/37 (40%)
Query: 55 RPPPPLPPPPP-----------PPPPPRLLSAPAPNS 80
+PPP LPPPPP PPPPP P+P S
Sbjct: 770 KPPPALPPPPPLAKFPPPSQPQPPPPP----PPSPAS 802
Score = 33.1 bits (74), Expect = 0.095
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
Query: 56 PPPPLPPPPP------PPPPPRLLSAPA 77
P P PPPPP PPPPP L PA
Sbjct: 463 PGPSSPPPPPCPRLLRPPPPPAWLKGPA 490
Score = 29.6 bits (65), Expect = 1.1
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Query: 55 RPPPPLPPPPPP----PPPPRLLSAPAP 78
+ PPP PPPPP PPP + P P
Sbjct: 769 KKPPPALPPPPPLAKFPPPSQPQPPPPP 796
Score = 28.1 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEESWWSG 92
P LPP P PPPP P P P +W G
Sbjct: 457 PHLSLPPGPSSPPPP-----PCPRLLRPPPPPAWLKG 488
Score = 28.1 bits (61), Expect = 3.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 62 PPPPPPPPPRLLSAPAPNSTSCP 84
PPP PPPP L P P+ P
Sbjct: 771 PPPALPPPPPLAKFPPPSQPQPP 793
Score = 27.3 bits (59), Expect = 5.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNSTSC 83
RPP P P PP P L+ P +SC
Sbjct: 586 RPPSPAQNPQDPPLVPLTLALPPAPPSSC 614
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 46.2 bits (108), Expect = 1e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEE 87
PPPP PPPPPPPPPP L +P T P ++
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTSPKPTILPKKK 2442
Score = 44.7 bits (104), Expect = 3e-05
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPP PPPPPPPPPP P P TS
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNSTSCPT 85
+PPPP PPPPPPPPPP P P PT
Sbjct: 2404 QPPPPPPPPPPPPPPP---PPPPPPPLPPPT 2431
Score = 33.5 bits (75), Expect = 0.073
Identities = 14/28 (50%), Positives = 14/28 (50%)
Query: 61 PPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PPPPPPPPPP P P P S
Sbjct: 2405 PPPPPPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 32.7 bits (73), Expect = 0.12
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Query: 56 PPPPLPPPPPPPP-------PPRLLSAPAPNSTSCP 84
PPPP PPP PPP P + L+ +P +T+ P
Sbjct: 2419 PPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATP 2454
Score = 29.3 bits (64), Expect = 1.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 36 EPQKSCSKVTDSCRHVCQCRPPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
EP+K+ +K++ +P P P PP P P + P P + P E+S
Sbjct: 854 EPKKAQTKMSPKP----DAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS 902
Score = 27.3 bits (59), Expect = 5.2
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 28 GFVQVTHGEPQKSCSKVTDSCRHVCQ----CRPPPPLP-PPPPPPPPPRLLSAPA--PNS 80
G + P K+ ++ T + Q +PPP P P PPP P P+ P S
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS 506
Query: 81 TSCPTEE 87
T P ++
Sbjct: 507 TKPPPQQ 513
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 46.2 bits (108), Expect = 1e-05
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEE 87
PPPP PPPPPPPPPP L +P T P ++
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTSPKPTILPKKK 2442
Score = 44.7 bits (104), Expect = 3e-05
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPP PPPPPPPPPP P P TS
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNSTSCPT 85
+PPPP PPPPPPPPPP P P PT
Sbjct: 2404 QPPPPPPPPPPPPPPP---PPPPPPPLPPPT 2431
Score = 33.5 bits (75), Expect = 0.073
Identities = 14/28 (50%), Positives = 14/28 (50%)
Query: 61 PPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PPPPPPPPPP P P P S
Sbjct: 2405 PPPPPPPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 32.7 bits (73), Expect = 0.12
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 7/36 (19%)
Query: 56 PPPPLPPPPPPPP-------PPRLLSAPAPNSTSCP 84
PPPP PPP PPP P + L+ +P +T+ P
Sbjct: 2419 PPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATP 2454
Score = 29.3 bits (64), Expect = 1.4
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 36 EPQKSCSKVTDSCRHVCQCRPPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
EP+K+ +K++ +P P P PP P P + P P + P E+S
Sbjct: 854 EPKKAQTKMSPKP----DAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS 902
Score = 27.3 bits (59), Expect = 5.2
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 28 GFVQVTHGEPQKSCSKVTDSCRHVCQ----CRPPPPLP-PPPPPPPPPRLLSAPA--PNS 80
G + P K+ ++ T + Q +PPP P P PPP P P+ P S
Sbjct: 447 GKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS 506
Query: 81 TSCPTEE 87
T P ++
Sbjct: 507 TKPPPQQ 513
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 46.2 bits (108), Expect = 1e-05
Identities = 20/30 (66%), Positives = 22/30 (73%), Gaps = 5/30 (16%)
Query: 56 PPPPLPPPPP-----PPPPPRLLSAPAPNS 80
PPPPLPPPPP PPPPP L+AP P+S
Sbjct: 584 PPPPLPPPPPIKGPFPPPPPLPLAAPLPHS 613
Score = 34.7 bits (78), Expect = 0.033
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 56 PPPPLP-----PPPPPPPPPRLLSAPAPNSTSCP 84
P PPLP PPPPP PPP + P P P
Sbjct: 572 PSPPLPLLSGVPPPPPLPPPPPIKGPFPPPPPLP 605
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 45.8 bits (107), Expect = 1e-05
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 5/34 (14%)
Query: 56 PPPPLPPP-----PPPPPPPRLLSAPAPNSTSCP 84
PPPPLPPP PPPPPPP L ++PAP + P
Sbjct: 686 PPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP 719
Score = 38.1 bits (87), Expect = 0.003
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 57 PPPLPPPP--PPPPPPRLLSAPAPNSTSCP 84
PPP PPPP PPPPP L +S+ CP
Sbjct: 719 PPPAPPPPGLAPPPPPGLFFGLGSSSSQCP 748
Score = 37.0 bits (84), Expect = 0.007
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PP P PPPPPPP PP + P P P S
Sbjct: 678 PPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNS 710
Score = 36.2 bits (82), Expect = 0.011
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 19 LHCALHPLWGFV---QVTHGEPQKSCSKVTDSCRHVCQCRPPPPLPP----PPPPPPPPR 71
+H AL P+ G Q P S + P PP+PP PP PPPPP
Sbjct: 627 IHAALQPMEGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPP 686
Query: 72 LLSAPAPNSTSCP 84
P P+S P
Sbjct: 687 PPPLPPPSSAGPP 699
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 45.1 bits (105), Expect = 2e-05
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 33 THGEPQKSCSKVTDSCRHVCQCRPPPPLPPPPPPPPPPRL 72
+HG + S + + V +P PPLPPPPPPPPPP+L
Sbjct: 533 SHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPPPPPQL 572
Score = 32.7 bits (73), Expect = 0.12
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTE 86
PPPP PPPPP PP P S P +
Sbjct: 561 PPPPPPPPPPQLPPEAESLTPMVMPVSVPVK 591
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 44.7 bits (104), Expect = 3e-05
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 9/42 (21%)
Query: 56 PPPPLPPPPPPPPPPR---LLSAPAPN------STSCPTEES 88
PPPP PPPPPPPPPP+ LL P P S S EES
Sbjct: 329 PPPPPPPPPPPPPPPQSLELLLLPVPKGRVSKPSNSASEEES 370
Score = 32.3 bits (72), Expect = 0.16
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 10/35 (28%)
Query: 56 PPPPLPPP----------PPPPPPPRLLSAPAPNS 80
P PLPPP PPPPPPP P P S
Sbjct: 311 PEDPLPPPPSEKKPEKVTPPPPPPPPPPPPPPPQS 345
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 44.3 bits (103), Expect = 4e-05
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 53 QCRPPPPLPPPPPPPPPPRLLSAPAPNS 80
Q PPPP PPPPPPPPPP + AP++
Sbjct: 1439 QILPPPPPPPPPPPPPPPVIPHPAAPSA 1466
Score = 42.7 bits (99), Expect = 1e-04
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPP PPPPPPPPPP ++ PA S +
Sbjct: 1442 PPPPPPPPPPPPPPPVIPHPAAPSAA 1467
Score = 35.4 bits (80), Expect = 0.019
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
PPPP PPPPP P P SA N+ P + +
Sbjct: 1447 PPPPPPPPPPVIPHPAAPSAAQANAILAPVKSN 1479
Score = 33.9 bits (76), Expect = 0.056
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 56 PPPPLPPPPPPPPPP 70
P LPPPPPPPPPP
Sbjct: 1437 PEQILPPPPPPPPPP 1451
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 43.9 bits (102), Expect = 5e-05
Identities = 17/21 (80%), Positives = 17/21 (80%)
Query: 56 PPPPLPPPPPPPPPPRLLSAP 76
PPPP PPPPPPPPPP SAP
Sbjct: 1999 PPPPPPPPPPPPPPPPPPSAP 2019
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/29 (58%), Positives = 17/29 (58%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPPPPPPPP AP P
Sbjct: 1997 PPPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
Score = 42.0 bits (97), Expect = 2e-04
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 43 KVTDSCRHVCQCRPPPPLPPPPPPPPPPRLLSAPAPNS 80
K+ ++ Q PP P PPPPPPPPPP P P++
Sbjct: 1981 KIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSA 2018
Score = 41.6 bits (96), Expect = 3e-04
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPP PPPPPPPPPP P P ++ P
Sbjct: 1993 PPPTPPPPPPPPPPPPPPPPPPPPSAPP 2020
Score = 39.7 bits (91), Expect = 0.001
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPPPPPPP P S P
Sbjct: 2003 PPPPPPPPPPPPPPSAPPQVQLPVSLDLP 2031
Score = 37.0 bits (84), Expect = 0.007
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 58 PPLPPPPPPPPPPRLLSAPAPNSTSCPTE 86
PP PPPPPPPPP P P S P +
Sbjct: 1993 PPPTPPPPPPPPPPPPPPPPPPPPSAPPQ 2021
Score = 35.8 bits (81), Expect = 0.015
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNS 80
P P PPPPPPPPP + P P+S
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSS 1976
Score = 35.4 bits (80), Expect = 0.019
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTE 86
PPPP P PP PP P + PN+ S P +
Sbjct: 1961 PPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQ 1991
Score = 34.7 bits (78), Expect = 0.033
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 58 PPLPPPPPPPPPPRLLS 74
PP PPPPPPPPP LS
Sbjct: 3117 PPPPPPPPPPPPSSSLS 3133
Score = 34.3 bits (77), Expect = 0.043
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 56 PPPPL---PPPPPPPPPPRLLSAPAPNSTSCPTEES 88
P PL PPPPPPPPPP S+ + T +ES
Sbjct: 3109 PTKPLLQTPPPPPPPPPPPPSSSLSGQQTEQQNKES 3144
Score = 31.6 bits (70), Expect = 0.28
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 28 GFVQVTHGEPQKSCSKVTDSCRHVCQCRPPPPLPPPPPP 66
GF P S S + + Q PPPP PPPPPP
Sbjct: 3092 GFPTSATSSPALSLSSAPT--KPLLQTPPPPPPPPPPPP 3128
Score = 29.3 bits (64), Expect = 1.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 58 PPLPPPPPPPPPPRLLSAPAPNSTS 82
P P PPPPPPP L P +S
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSS 1976
Score = 28.5 bits (62), Expect = 2.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
P P P PPPPPP PAP S
Sbjct: 1949 PISPSSPETPPPPPPPPPLPPAPPQPS 1975
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 43.9 bits (102), Expect = 5e-05
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 52 CQCRPPPPLPPPPPPPPPPRLLS--APAP 78
C+ PPP PPPPPPPPPP LS APAP
Sbjct: 68 CRDPGPPPPPPPPPPPPPPPGLSPRAPAP 96
Score = 37.0 bits (84), Expect = 0.007
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 47 SCRHVCQCRPPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
+CR PPPP PPPPPPP AP P P
Sbjct: 67 ACRDPGPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLP 104
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 43.5 bits (101), Expect = 7e-05
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNST 81
PPPP PPPPPPPPP R LS+ + +T
Sbjct: 645 PPPPPPPPPPPPPPLRALSSSSQAAT 670
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNS 80
PPPP PPPPPPPPPP L A + +S
Sbjct: 642 PPPPPPPPPPPPPPPPPLRALSSSS 666
Score = 41.2 bits (95), Expect = 3e-04
Identities = 14/15 (93%), Positives = 14/15 (93%)
Query: 56 PPPPLPPPPPPPPPP 70
PPPP PPPPPPPPPP
Sbjct: 639 PPPPPPPPPPPPPPP 653
Score = 41.2 bits (95), Expect = 3e-04
Identities = 14/15 (93%), Positives = 14/15 (93%)
Query: 56 PPPPLPPPPPPPPPP 70
PPPP PPPPPPPPPP
Sbjct: 640 PPPPPPPPPPPPPPP 654
Score = 34.3 bits (77), Expect = 0.043
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 60 LPPPPPPPPPPRLLSAPAP 78
LPPPPPPPPPP P P
Sbjct: 638 LPPPPPPPPPPPPPPPPPP 656
Score = 34.3 bits (77), Expect = 0.043
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 59 PLPPPPPPPPPPRLLSAPAP 78
P PPPPPPPPPP P P
Sbjct: 639 PPPPPPPPPPPPPPPPPPPP 658
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 43.1 bits (100), Expect = 9e-05
Identities = 18/30 (60%), Positives = 18/30 (60%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
RP P PPPPPPPPPP L A P S P
Sbjct: 2033 RPQTPEPPPPPPPPPPPPLPAAPPQPASTP 2062
Score = 38.5 bits (88), Expect = 0.002
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 53 QCRPPPPLPPPPPPPP----PPRLLSAPAPNSTSCP 84
Q PPP PPPPPPPP PP+ S PA +++ P
Sbjct: 2035 QTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPP 2070
Score = 32.0 bits (71), Expect = 0.21
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPPPLP PP P + A AP TS
Sbjct: 2047 PPPPLPAAPPQPASTPAIPASAPPITS 2073
Score = 31.6 bits (70), Expect = 0.28
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 58 PPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
P LP PPP PPP+ P P S+ P++ S
Sbjct: 2478 PSLPQPPPQAPPPQ---CPLPQSSPSPSQLS 2505
Score = 27.3 bits (59), Expect = 5.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 56 PPPPLPPPPPPPPP-PRLLSAPAPNSTS 82
P P PPP PPP P S+P+P+ S
Sbjct: 2478 PSLPQPPPQAPPPQCPLPQSSPSPSQLS 2505
Score = 26.6 bits (57), Expect = 8.9
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 53 QCRPPPPLPPPPP---PPPPPRL 72
Q +P PPPPP PPP P+L
Sbjct: 3202 QQQPQVQQPPPPPAAQPPPTPQL 3224
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 43.1 bits (100), Expect = 9e-05
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 56 PPPPLPPPP----PPPPPPRLLSAPAPNSTSCPTEESWWSGLVIIIA 98
PPPP+PPPP PPPPPP PA + +ES SGL IA
Sbjct: 188 PPPPVPPPPTGATPPPPPP----LPAGGAQGSSHDESSMSGLAAAIA 230
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 42.7 bits (99), Expect = 1e-04
Identities = 19/28 (67%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 53 QCRPPPPLPPPP--PPPPPPRLLSAPAP 78
Q RPPPP PPPP PPPPPP L P P
Sbjct: 42 QRRPPPPPPPPPLPPPPPPPPLPPLPLP 69
Score = 41.2 bits (95), Expect = 3e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 56 PPPPLPPPPPPPPPPRLLSAP 76
PPPPLPPPPPPPP P L P
Sbjct: 50 PPPPLPPPPPPPPLPPLPLPP 70
Score = 31.2 bits (69), Expect = 0.36
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAP 78
R P PPPPPPPPP P P
Sbjct: 38 RRPGQRRPPPPPPPPPLPPPPPPP 61
Score = 30.4 bits (67), Expect = 0.62
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 56 PPPPLPPPPPPPPPPRL 72
PPPP PPP PP P P L
Sbjct: 55 PPPPPPPPLPPLPLPPL 71
Score = 28.5 bits (62), Expect = 2.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNST 81
PPP PPPP PP P L +ST
Sbjct: 55 PPPPPPPPLPPLPLPPLKKRGNHST 79
Score = 27.7 bits (60), Expect = 4.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
P P PPPPPPP L P P
Sbjct: 37 PRRPGQRRPPPPPPPPPLPPPPP 59
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 42.4 bits (98), Expect = 2e-04
Identities = 18/28 (64%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 56 PPPPLPPP---PPPPPPPRLLSAPAPNS 80
PPPP PPP PPPPPPP L P PN+
Sbjct: 2021 PPPPPPPPLALPPPPPPPPPLPPPLPNA 2048
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 59 PLPPPPPPPPPPRLLSAPAPNSTSCP 84
P PPPPPPPPPP L P P P
Sbjct: 2017 PPPPPPPPPPPPLALPPPPPPPPPLP 2042
Score = 36.2 bits (82), Expect = 0.011
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 58 PPLPPPPPPPPPPRLLSAPAP 78
PP PPPPPPPPP L P P
Sbjct: 2017 PPPPPPPPPPPPLALPPPPPP 2037
Score = 27.3 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 56 PPPPLPPPPPPPPPP 70
P L PPPPPPPP
Sbjct: 2010 PNKALVHPPPPPPPP 2024
>gi|149158696 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 53 QCRPPPPLPPPPPPPPPPRLLSAPAPNSTS 82
Q PPPP PPPPPPPP P + P P S S
Sbjct: 648 QTAPPPP-PPPPPPPPAPEQQTMPPPGSPS 676
Score = 30.8 bits (68), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPP P PPP P S+ AP+ST+
Sbjct: 388 PPPTPNAEAPPPGPGQASSVAPSSTN 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 63 PPPPPPPPRLLSAPAPNSTSCP 84
PPPPPPPP PAP + P
Sbjct: 651 PPPPPPPPP--PPPAPEQQTMP 670
>gi|18375632 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 53 QCRPPPPLPPPPPPPPPPRLLSAPAPNSTS 82
Q PPPP PPPPPPPP P + P P S S
Sbjct: 648 QTAPPPP-PPPPPPPPAPEQQTMPPPGSPS 676
Score = 30.8 bits (68), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPP P PPP P S+ AP+ST+
Sbjct: 388 PPPTPNAEAPPPGPGQASSVAPSSTN 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 63 PPPPPPPPRLLSAPAPNSTSCP 84
PPPPPPPP PAP + P
Sbjct: 651 PPPPPPPPP--PPPAPEQQTMP 670
>gi|18375630 HLA-B associated transcript-3 isoform b [Homo sapiens]
Length = 1126
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 53 QCRPPPPLPPPPPPPPPPRLLSAPAPNSTS 82
Q PPPP PPPPPPPP P + P P S S
Sbjct: 648 QTAPPPP-PPPPPPPPAPEQQTMPPPGSPS 676
Score = 30.8 bits (68), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPP P PPP P S+ AP+ST+
Sbjct: 388 PPPTPNAEAPPPGPGQASSVAPSSTN 413
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 63 PPPPPPPPRLLSAPAPNSTSCP 84
PPPPPPPP PAP + P
Sbjct: 651 PPPPPPPPP--PPPAPEQQTMP 670
>gi|149158692 HLA-B associated transcript-3 isoform a [Homo sapiens]
Length = 1132
Score = 42.0 bits (97), Expect = 2e-04
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 53 QCRPPPPLPPPPPPPPPPRLLSAPAPNSTS 82
Q PPPP PPPPPPPP P + P P S S
Sbjct: 654 QTAPPPP-PPPPPPPPAPEQQTMPPPGSPS 682
Score = 30.8 bits (68), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
PPP P PPP P S+ AP+ST+
Sbjct: 394 PPPTPNAEAPPPGPGQASSVAPSSTN 419
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 63 PPPPPPPPRLLSAPAPNSTSCP 84
PPPPPPPP PAP + P
Sbjct: 657 PPPPPPPPP--PPPAPEQQTMP 676
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 41.6 bits (96), Expect = 3e-04
Identities = 19/33 (57%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 54 CRPPPPLPPPPPP---PPPPRLLSAPAPNSTSC 83
CR PP PPPPP PPPP PAP +TSC
Sbjct: 125 CRMEPPDGPPPPPQQQPPPPPQPPQPAPQATSC 157
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 56 PPPPL----PPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPPPPPPPP +APA + P
Sbjct: 74 PPPPATAAPPPPPPPPPPPASAAAPASGPPAPP 106
Score = 40.8 bits (94), Expect = 5e-04
Identities = 19/29 (65%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Query: 56 PPPPLP----PPPPPPPPPRLLSAPAPNS 80
PPPP P PPPPPPPPP SA AP S
Sbjct: 72 PPPPPPATAAPPPPPPPPPPPASAAAPAS 100
Score = 36.6 bits (83), Expect = 0.009
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 9/32 (28%)
Query: 56 PPPPLPPPPP---------PPPPPRLLSAPAP 78
PPPP PPPPP PP PP L + P P
Sbjct: 83 PPPPPPPPPPASAAAPASGPPAPPGLAAGPGP 114
Score = 31.2 bits (69), Expect = 0.36
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPP PPP PPP P P S + P
Sbjct: 71 PPPPPPPATAAPPPPPPPPPPPASAAAP 98
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 41.6 bits (96), Expect = 3e-04
Identities = 21/37 (56%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
Query: 55 RPPPPLPPPPPP-----PPPPRLLSAPAPNSTSCPTE 86
+PPPP PPPPPP PPPP L PAP S P E
Sbjct: 1410 QPPPPPPPPPPPPQQPLPPPPNL--EPAPPSLGDPGE 1444
Score = 40.8 bits (94), Expect = 5e-04
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
P P PPPPPPPPPP+ P PN P
Sbjct: 1408 PAQPPPPPPPPPPPPQQPLPPPPNLEPAP 1436
Score = 37.0 bits (84), Expect = 0.007
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PP PPPPPPPPPP P P
Sbjct: 1407 PPAQPPPPPPPPPPPPQQPLPPP 1429
Score = 31.2 bits (69), Expect = 0.36
Identities = 12/16 (75%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
Query: 57 PPPLPP--PPPPPPPP 70
PP PP PPPPPPPP
Sbjct: 1403 PPEAPPAQPPPPPPPP 1418
Score = 28.9 bits (63), Expect = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 56 PPPPLPPPPPPPPPP 70
PP P PPPPPPP
Sbjct: 1403 PPEAPPAQPPPPPPP 1417
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform
3 [Homo sapiens]
Length = 2059
Score = 41.6 bits (96), Expect = 3e-04
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 56 PPPPLPPPPPPPPPPR 71
PPPPLPPPPPPPPP +
Sbjct: 79 PPPPLPPPPPPPPPDK 94
Score = 39.3 bits (90), Expect = 0.001
Identities = 14/19 (73%), Positives = 14/19 (73%)
Query: 52 CQCRPPPPLPPPPPPPPPP 70
C PPPP PPPP PPPPP
Sbjct: 70 CHLFPPPPPPPPPLPPPPP 88
Score = 37.7 bits (86), Expect = 0.004
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 50 HVCQCRPPPPLPPPPPPPPPP 70
H+ PPPP P PPPPPPPP
Sbjct: 71 HLFPPPPPPPPPLPPPPPPPP 91
Score = 37.4 bits (85), Expect = 0.005
Identities = 13/15 (86%), Positives = 13/15 (86%)
Query: 56 PPPPLPPPPPPPPPP 70
PPPP PPPPPPPPP
Sbjct: 78 PPPPPLPPPPPPPPP 92
Score = 30.8 bits (68), Expect = 0.47
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Query: 55 RPPPP---LPPPPPPPPPPRLLSAPAP 78
R PP L PPPPPPPPP P P
Sbjct: 64 RHSPPGCHLFPPPPPPPPPLPPPPPPP 90
Score = 29.3 bits (64), Expect = 1.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 61 PPPPPPPPPPRLLSAPAPN 79
PPPPPPPP P P P+
Sbjct: 75 PPPPPPPPLPPPPPPPPPD 93
Score = 27.3 bits (59), Expect = 5.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 57 PPPLPPPPPPPPPPRLL 73
PPP PPPPP RLL
Sbjct: 84 PPPPPPPPPDKDDIRLL 100
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/30 (60%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 56 PPPPLPPPPPP---PPPPRLLSAPAPNSTS 82
PPPPLPPPPPP PPPP + P TS
Sbjct: 7 PPPPLPPPPPPLGAPPPPPPSAPPVSTDTS 36
Score = 40.8 bits (94), Expect = 5e-04
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNSTSCPT 85
RP P PPPP PPPPP L P P+S+ T
Sbjct: 168 RPNVPAPPPPTPPPPPPPLPPPLPSSSPIKT 198
Score = 40.0 bits (92), Expect = 8e-04
Identities = 17/28 (60%), Positives = 17/28 (60%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
P P PPPPP PPPP L AP P S P
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPPPSAP 29
Score = 38.5 bits (88), Expect = 0.002
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 54 CRPPPPLPPPPPPPPP 69
C PPPP PPPPP PPP
Sbjct: 221 CAPPPPPPPPPPTPPP 236
Score = 35.4 bits (80), Expect = 0.019
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 56 PPPPLPPPPPPPPPP 70
PP P PPPPPPPPP
Sbjct: 217 PPVPCAPPPPPPPPP 231
Score = 35.4 bits (80), Expect = 0.019
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 52 CQCRPPPPLPPPPPPPPPP 70
C PPPP PPP PPP PP
Sbjct: 221 CAPPPPPPPPPPTPPPLPP 239
Score = 35.0 bits (79), Expect = 0.025
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PP PPP PP +LS A P
Sbjct: 226 PPPPPPPTPPPLPPASVLSDKAVKPQLAP 254
Score = 34.7 bits (78), Expect = 0.033
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 56 PPPPLPPPPPPPPPP 70
P P PPPPPPPPPP
Sbjct: 218 PVPCAPPPPPPPPPP 232
Score = 31.6 bits (70), Expect = 0.28
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 58 PPLP-PPPPPPPPPRLLSAPAP 78
PP+P PPPPPPPP P P
Sbjct: 217 PPVPCAPPPPPPPPPPTPPPLP 238
Score = 29.3 bits (64), Expect = 1.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 56 PPPPLPPPPPPPPPPRLLSAP 76
PPPP PP PPP P + P
Sbjct: 179 PPPPPPPLPPPLPSSSPIKTP 199
Score = 26.6 bits (57), Expect = 8.9
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 22/45 (48%)
Query: 56 PPPPLPP------------PP----------PPPPPPRLLSAPAP 78
PPPPLPP PP PPP PP+ S AP
Sbjct: 292 PPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAP 336
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/32 (56%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCPTEE 87
PPPPLPP PPPPPPP P T P +E
Sbjct: 1539 PPPPLPPQPPPPPPP-----PPVEPTKLPFKE 1565
Score = 39.7 bits (91), Expect = 0.001
Identities = 16/24 (66%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 57 PPPLPPPPPPPPP--PRLLSAPAP 78
PPPLPPPPPPPPP P + P P
Sbjct: 706 PPPLPPPPPPPPPAHPAVTVPPPP 729
Score = 37.7 bits (86), Expect = 0.004
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 56 PP--PPLPPPPPPPPPPRLLSAPAP 78
PP PPLPPPPPPPPP P P
Sbjct: 684 PPGFPPLPPPPPPPPPQPGFPMPPP 708
Score = 35.4 bits (80), Expect = 0.019
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PPP PPPPPPPP ++ P P
Sbjct: 706 PPPLPPPPPPPPPAHPAVTVPPP 728
Score = 35.0 bits (79), Expect = 0.025
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 56 PPPPLPPPPPPPPPP 70
PPP PP PPPPPPP
Sbjct: 683 PPPGFPPLPPPPPPP 697
Score = 35.0 bits (79), Expect = 0.025
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 56 PPPPLPPPPPPPPPPRLLSAP 76
PPPPLP PP PPPP L P
Sbjct: 726 PPPPLPAPPGVPPPPILPPLP 746
Score = 34.3 bits (77), Expect = 0.043
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 8/23 (34%)
Query: 56 PPPPLP--------PPPPPPPPP 70
PPPP P PPPPPPPPP
Sbjct: 696 PPPPQPGFPMPPPLPPPPPPPPP 718
Score = 34.3 bits (77), Expect = 0.043
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Query: 56 PPP----PLPPPPPPPPPPRLLSAPA 77
PPP P+PPP PPPPPP + PA
Sbjct: 697 PPPQPGFPMPPPLPPPPPPPPPAHPA 722
Score = 33.5 bits (75), Expect = 0.073
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAP 78
PP P PPPPPPP P + P P
Sbjct: 688 PPLPPPPPPPPPQPGFPMPPPLP 710
Score = 33.1 bits (74), Expect = 0.095
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 56 PPPPLPP--PPPPPPPPRLLSAPAP 78
PPPP P PPPPPPPP P P
Sbjct: 682 PPPPGFPPLPPPPPPPPPQPGFPMP 706
Score = 33.1 bits (74), Expect = 0.095
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 10/25 (40%)
Query: 56 PPPPLPPP----------PPPPPPP 70
PPPP PPP PPPPPPP
Sbjct: 692 PPPPPPPPQPGFPMPPPLPPPPPPP 716
Score = 33.1 bits (74), Expect = 0.095
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 10/25 (40%)
Query: 56 PPPPLPP----------PPPPPPPP 70
PPPP PP PPPPPPPP
Sbjct: 693 PPPPPPPQPGFPMPPPLPPPPPPPP 717
Score = 31.6 bits (70), Expect = 0.28
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 57 PPPLPP-PPPPPPPPRLLSAPAPNSTSCPTEE 87
PPP PP PP PPP P A P+ P E
Sbjct: 1283 PPPRPPRPPSPPPEPETTDASHPSVPPEPLAE 1314
Score = 31.2 bits (69), Expect = 0.36
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTS 82
P PL PP PPP PPR S P T+
Sbjct: 1275 PLPLQPPLPPPRPPRPPSPPPEPETT 1300
Score = 30.0 bits (66), Expect = 0.81
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 10/34 (29%)
Query: 57 PPPLPPPPPP------PPPPRLLSAPAPNSTSCP 84
PPP PPPPP PPPP PAP P
Sbjct: 710 PPPPPPPPPAHPAVTVPPPP----LPAPPGVPPP 739
Score = 28.9 bits (63), Expect = 1.8
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
Query: 55 RPPPPLPPPPPPPPPPRLLSAPAPNST 81
+PP P P PP PP PP P P +T
Sbjct: 1279 QPPLPPPRPPRPPSPP-----PEPETT 1300
Score = 28.5 bits (62), Expect = 2.3
Identities = 10/14 (71%), Positives = 11/14 (78%)
Query: 56 PPPPLPPPPPPPPP 69
PPPP+ PP PP PP
Sbjct: 737 PPPPILPPLPPFPP 750
Score = 27.7 bits (60), Expect = 4.0
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 7/28 (25%)
Query: 56 PPPPLP-------PPPPPPPPPRLLSAP 76
PPPP P PPPP P PP + P
Sbjct: 713 PPPPPPAHPAVTVPPPPLPAPPGVPPPP 740
Score = 27.3 bits (59), Expect = 5.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPA 77
P PP PP PPP P S P+
Sbjct: 1285 PRPPRPPSPPPEPETTDASHPS 1306
Score = 26.9 bits (58), Expect = 6.8
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 22/54 (40%)
Query: 57 PPPLPP-----------PPPPPPP----------PRLLSAPAP-NSTSCPTEES 88
PPPLPP PP PPPP P +P P +S PT ES
Sbjct: 434 PPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSPGTPTLES 487
Score = 26.9 bits (58), Expect = 6.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 55 RPPPPLPPPPPPP 67
+PPPP PPPP P
Sbjct: 1546 QPPPPPPPPPVEP 1558
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 41.6 bits (96), Expect = 3e-04
Identities = 17/29 (58%), Positives = 17/29 (58%)
Query: 56 PPPPLPPPPPPPPPPRLLSAPAPNSTSCP 84
PPPP PPPP PPPPP P P S P
Sbjct: 179 PPPPPPPPPLPPPPPPQPPPPPPQSLGPP 207
Score = 35.0 bits (79), Expect = 0.025
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPN 79
PPP PP PPPPPP L PN
Sbjct: 189 PPPPPPQPPPPPPQSLGPPGRPN 211
Score = 33.5 bits (75), Expect = 0.073
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 57 PPPLPPPPPPPPPPRLLSAPAPNSTSCPTEES 88
P L PPPPPPPP L P P P +S
Sbjct: 172 PSYLTQPPPPPPPPPPLPPPPPPQPPPPPPQS 203
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,495,484
Number of Sequences: 37866
Number of extensions: 703302
Number of successful extensions: 34572
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 301
Number of HSP's that attempted gapping in prelim test: 11240
Number of HSP's gapped (non-prelim): 12286
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.