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Search of human proteins with 28916698
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
(594 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 1196 0.0
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 346 3e-95
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 346 3e-95
gi|46195755 SCAN domain containing 3 [Homo sapiens] 322 5e-88
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 319 5e-87
gi|115511046 zinc finger protein 258 [Homo sapiens] 301 9e-82
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 290 2e-78
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 145 8e-35
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 145 1e-34
gi|7662294 EPM2A interacting protein 1 [Homo sapiens] 101 2e-21
gi|55741653 hypothetical protein LOC57691 [Homo sapiens] 43 0.001
gi|149773449 zinc finger protein 862 [Homo sapiens] 41 0.003
gi|115511057 hypothetical protein LOC256643 [Homo sapiens] 32 1.7
gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens] 30 4.8
gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens] 30 4.8
gi|33188443 microfilament and actin filament cross-linker protei... 30 4.8
gi|33188445 microfilament and actin filament cross-linker protei... 30 4.8
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 30 4.8
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 30 4.8
gi|23510377 KN motif and ankyrin repeat domains 1 isoform b [Hom... 30 6.3
gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Hom... 30 6.3
gi|21071067 TBP-associated factor 5 [Homo sapiens] 30 6.3
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 30 6.3
gi|157694513 leucine-rich repeat-containing G protein-coupled re... 30 6.3
gi|88953346 PREDICTED: Tripartite motif-containing protein 43-li... 30 8.2
gi|40805852 thrombospondin type I domain-containing 1 isoform 2 ... 30 8.2
gi|8923894 thrombospondin type I domain-containing 1 isoform 1 [... 30 8.2
gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens] 30 8.2
gi|6912500 phosphatidylinositol glycan anchor biosynthesis, clas... 30 8.2
gi|29029537 phosphatidylinositol glycan anchor biosynthesis, cla... 30 8.2
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 1196 bits (3093), Expect = 0.0
Identities = 594/594 (100%), Positives = 594/594 (100%)
Query: 1 MSKKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAG 60
MSKKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAG
Sbjct: 1 MSKKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAG 60
Query: 61 HDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCA 120
HDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCA
Sbjct: 61 HDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCA 120
Query: 121 LEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETT 180
LEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETT
Sbjct: 121 LEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETT 180
Query: 181 DMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSV 240
DMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSV
Sbjct: 181 DMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSV 240
Query: 241 CTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINF 300
CTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINF
Sbjct: 241 CTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINF 300
Query: 301 IKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSN 360
IKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSN
Sbjct: 301 IKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSN 360
Query: 361 LVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIE 420
LVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIE
Sbjct: 361 LVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIE 420
Query: 421 KRNFTNFPFLEEIIVSDNEGIFIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFLF 480
KRNFTNFPFLEEIIVSDNEGIFIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFLF
Sbjct: 421 KRNFTNFPFLEEIIVSDNEGIFIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFLF 480
Query: 481 NIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFAT 540
NIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFAT
Sbjct: 481 NIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFAT 540
Query: 541 TYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQLQQKSL 594
TYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQLQQKSL
Sbjct: 541 TYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQLQQKSL 594
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 346 bits (888), Expect = 3e-95
Identities = 192/589 (32%), Positives = 311/589 (52%), Gaps = 9/589 (1%)
Query: 3 KKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHD 62
K+RK+D+ Y+ + FT D QCVLC + SN+ L PSKL H +H D
Sbjct: 106 KRRKYDESYLSFGFTYFGNRDAPHA-QCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKD 164
Query: 63 LNSLK-HMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCAL 121
++ K H+ +P + V + ++ +ASY +Y A HT+ E L+KPCA
Sbjct: 165 ISFFKQHLDSPENNKPPTPKI-VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAK 223
Query: 122 EIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTD 181
++ + KK+ V LS+ + RI +++ DI ++++ +K +QL E+ D
Sbjct: 224 DVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICD-GFSLQLDESAD 282
Query: 182 MDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVC 241
+ + L+ FVRY + I E+ L CE LQ + G ++FN F KH+I + C VC
Sbjct: 283 VSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVC 342
Query: 242 TDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFI 301
+D + ++ G+ +E V +K P +HCLL HAL +K +PT L++ L V++IN+I
Sbjct: 343 SDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYI 402
Query: 302 KGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNL 361
K R RL + EE+G +++ LL +TE+RWLSRG++L +FE+ E+ F+ + L
Sbjct: 403 KARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRL 461
Query: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421
D N + + LAYLAD+F LNE++ SMQ + + +K+S+ +RK FW +E+
Sbjct: 462 SDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEE 521
Query: 422 RNFTNFPFLEEIIVSDNEGI--FIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFL 479
NF FP L + + N + I + I HL+ L YF + N+ + W+ +PF
Sbjct: 522 ENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPV--TNDNNAWVRNPFT 579
Query: 480 FNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFA 539
+ L +L + Q+ F + L DFW + +P++A+ A+ +L+PFA
Sbjct: 580 VTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFA 639
Query: 540 TTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQ 588
T +LCE GFS KTK R + + +R+ +S P I ++K Q
Sbjct: 640 TMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQ 688
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 346 bits (888), Expect = 3e-95
Identities = 192/589 (32%), Positives = 311/589 (52%), Gaps = 9/589 (1%)
Query: 3 KKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHD 62
K+RK+D+ Y+ + FT D QCVLC + SN+ L PSKL H +H D
Sbjct: 106 KRRKYDESYLSFGFTYFGNRDAPHA-QCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKD 164
Query: 63 LNSLK-HMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCAL 121
++ K H+ +P + V + ++ +ASY +Y A HT+ E L+KPCA
Sbjct: 165 ISFFKQHLDSPENNKPPTPKI-VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAK 223
Query: 122 EIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTD 181
++ + KK+ V LS+ + RI +++ DI ++++ +K +QL E+ D
Sbjct: 224 DVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICD-GFSLQLDESAD 282
Query: 182 MDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVC 241
+ + L+ FVRY + I E+ L CE LQ + G ++FN F KH+I + C VC
Sbjct: 283 VSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVC 342
Query: 242 TDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFI 301
+D + ++ G+ +E V +K P +HCLL HAL +K +PT L++ L V++IN+I
Sbjct: 343 SDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYI 402
Query: 302 KGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNL 361
K R RL + EE+G +++ LL +TE+RWLSRG++L +FE+ E+ F+ + L
Sbjct: 403 KARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRL 461
Query: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421
D N + + LAYLAD+F LNE++ SMQ + + +K+S+ +RK FW +E+
Sbjct: 462 SDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEE 521
Query: 422 RNFTNFPFLEEIIVSDNEGI--FIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFL 479
NF FP L + + N + I + I HL+ L YF + N+ + W+ +PF
Sbjct: 522 ENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPV--TNDNNAWVRNPFT 579
Query: 480 FNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFA 539
+ L +L + Q+ F + L DFW + +P++A+ A+ +L+PFA
Sbjct: 580 VTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFA 639
Query: 540 TTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQ 588
T +LCE GFS KTK R + + +R+ +S P I ++K Q
Sbjct: 640 TMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQ 688
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 322 bits (826), Expect = 5e-88
Identities = 195/589 (33%), Positives = 314/589 (53%), Gaps = 11/589 (1%)
Query: 5 RKWDDDYVRYWFTCTTEVDG-TQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHDL 63
RK+D Y+ + F +DG +PQC++C V +N ++PSKL H +H ++
Sbjct: 735 RKYDPSYIEFGFVAV--IDGEVLKPQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPK 792
Query: 64 NSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCALEI 123
+ + +S+ + F V+ + L+ASY+ A AK K P+T+AE LVK C E+
Sbjct: 793 EFFERKSSEL-KSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEV 851
Query: 124 AQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTDMD 183
+LG A KK+ QVPLS+D I RI E++ D+ Q++E IK + +QL E D+
Sbjct: 852 CLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKY-FSLQLDECRDIA 910
Query: 184 DCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFL-KHKIALDVCGSVCT 242
+ L+ +VR+ + +I EEF F L + +++ +++ + K + C VC+
Sbjct: 911 NMIILLVYVRFEHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCS 970
Query: 243 DGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIK 302
DGA+SM G++SE V +K+ P THC ++ +L +K + +L L +V+++N+IK
Sbjct: 971 DGAASMTGKHSEVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIK 1030
Query: 303 GRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLV 362
+ N RLF + + ++ LL H E+RWLSRG++L+ +FE+ E+ FL K
Sbjct: 1031 SNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLVFLQGKKPMWS 1090
Query: 363 DGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEKR 422
F++ + LAYL+D+F N+L+ASMQ S +K+ +K W+ RI
Sbjct: 1091 QLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKNRISTD 1150
Query: 423 NFTNFPFLEEIIVSDNEGIFIA---AEITLHLQQLSNFFHGYF-SIGDLNEASKWILDPF 478
+ F L II + IA I+ HL L F YF S D + WI +PF
Sbjct: 1151 CYDMFHNLTTIINEVGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPRIGNLWIQNPF 1210
Query: 479 LFNIDFVDDSYLMKNDLAELRASGQILMEFE-TMKLEDFWCAQFTAFPNLAKTALEILMP 537
L + D ++ + +++ L +L + + FE T L FW +P LA+ AL++L+
Sbjct: 1211 LSSKDNLNLTVTLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPELAEIALKLLLL 1270
Query: 538 FATTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQK 586
F +TYLCE GFS+L KTK R+ N+ +RVA+S PR + +K
Sbjct: 1271 FPSTYLCETGFSTLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKK 1319
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 319 bits (817), Expect = 5e-87
Identities = 194/600 (32%), Positives = 326/600 (54%), Gaps = 25/600 (4%)
Query: 5 RKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHDLN 64
R++++DY++Y F + RPQCV+CN++ +N L+PSKL H QH + L
Sbjct: 61 RRYNEDYLKYGFIKCEKPFENDRPQCVICNNILANESLKPSKLKRHLETQHAELIDKPLE 120
Query: 65 SLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCALEIA 124
+ S + A E LL +SY AY AKEK +T AEK++ P L++
Sbjct: 121 YFQRKKKDIKLSTQFLSCSTAVSEKALL-SSYLVAYRVAKEKIANTAAEKIILPACLDMV 179
Query: 125 QIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDD 184
+ + + KL+ +P +D+ + RI +++ + ++ ++ S + IQL E+TD+
Sbjct: 180 RTIFDDKSADKLKTIP-NDNTVSLRICTIAEHLETMLITRLQ-SGIDFAIQLDESTDIGS 237
Query: 185 CSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFN-LFRDFFLKHKIALDVCGSVCTD 243
C+ L+ +VRY + + +E+FL L + G+D+F L R ++K+ C + +D
Sbjct: 238 CTTLLVYVRYAWQDDFLEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNWKNCKGITSD 297
Query: 244 GASSMLGENSEFVAYVKKEIPHIVV-THCLLNPHALVIKTLPTKLRDALFTVVRVINFIK 302
G ++M G++S + + + + V HC ++ L + +P L + L V+V+NFIK
Sbjct: 298 GTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKNAVKVVNFIK 357
Query: 303 GRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLV 362
G + N RL + F EIG ++ LL+HT++RWLS+G+IL+ ++E+ EI+ FL K S+L
Sbjct: 358 GSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEIHFFLIEKKSHLA 417
Query: 363 DGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEKR 422
FE+ + LAYL D+F LNELS +Q + E++ F + WQ R++
Sbjct: 418 SIFEDDTWVTKLAYLTDIFSILNELSLKLQGKNSDVFQHVERIQGFRKTLLLWQVRLKSN 477
Query: 423 NFTNFPF------LEEIIVSDNEGIFIAAEITLHLQQLSNFFHGYF---SIGDLNEASKW 473
+ + F +EE I+++N I EI LHL LS F+ +F L E S W
Sbjct: 478 RPSYYMFPRFLQHIEENIINENILKEIKLEILLHLTSLSQTFNHFFPEEKFETLRENS-W 536
Query: 474 ILDPFLF-------NIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPN 526
+ DPF F ++ V + +N+L +L +S + ++ET+ L FW FP
Sbjct: 537 VKDPFAFRHPESIIELNLVPEE---ENELLQLSSSYTLKNDYETLSLSAFWMKVKEDFPL 593
Query: 527 LAKTALEILMPFATTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQK 586
L++ ++ +L+PF TT LCELGFS L KTK R+ N + +RVA+S VP +++++ ++
Sbjct: 594 LSRKSVLLLLPFTTTSLCELGFSILTQLKTKERNGLNCAAVMRVALSSCVPDWNELMNRQ 653
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 301 bits (772), Expect = 9e-82
Identities = 183/600 (30%), Positives = 322/600 (53%), Gaps = 23/600 (3%)
Query: 2 SKKRK------WDDDYVRYWFT-CTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQ 54
SKK++ +D +Y++ F C + + RPQCV+C + S+ +++P+ LS H +
Sbjct: 733 SKKKRLGFFQTYDTEYLKVGFIICPGSKESSPRPQCVICGEILSSENMKPANLSHHLKTK 792
Query: 55 HGGVAGHDLNSLKHMPAPSD-QSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAE 113
H + ++ + + Q+ +LK + E +L++ASY A+ A K P ++AE
Sbjct: 793 HSELENKPVDFFEQKSLEMECQNSSLKKCLLV--EKSLVKASYLIAFQTAASKKPFSIAE 850
Query: 114 KLVKPCALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVG 173
+L+KP +E+ VLG A K++ +PLS+ I RIDE+S DI Q+++ ++ S
Sbjct: 851 ELIKPYLVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLIQKVRESKW-FA 909
Query: 174 IQLAETTDMDDCSQLMAFVRYIKE--REIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHK 231
+Q+ E++++ + + L+ ++R+I R++ EE LFC + + G ++F L +
Sbjct: 910 LQIDESSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKS 969
Query: 232 IALDVCGSVCTDGASSMLGENSEFVAYVKKEIPHIVV-THCLLNPHALVIKTLPTKLRDA 290
+ C +CTDGA+SM G S A +++ + THC ++ LV + L L
Sbjct: 970 LNWKHCVGLCTDGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERLVAEKLSPCLHKI 1029
Query: 291 LFTVVRVINFIKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEI 350
L ++++FIK A N R+ EE+G E+ L H E+RW+SRG++L +FE+ EI
Sbjct: 1030 LLQSAQILSFIKSNALNSRMLTILCEEMGSEHVSLPLHAEVRWISRGRMLKRLFELRHEI 1089
Query: 351 NQFLHHKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVR 410
FL K S+L F ++E+ LAYL+D+F +NEL+ S+Q T + K+ F R
Sbjct: 1090 EIFLSQKHSDLAKYFHDEEWVGKLAYLSDIFSLINELNLSLQGTLTTFFNLCNKIDVFKR 1149
Query: 411 KFPFWQKRIEKRNFTNFPFLEEIIVSDNEGI---FIAAEITLHLQQLSNFFHGYF-SIGD 466
K W KR ++ ++ FP E S++ G+ I I HL+ LS F F D
Sbjct: 1150 KLKMWLKRTQENDYDMFPSFSEF--SNSSGLNMTDITRIIFEHLEGLSQVFSDCFPPEQD 1207
Query: 467 LNEASKWILDPFLFNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPN 526
L + WI+ PF+ N + + + L EL + + F+++ + FW T++P
Sbjct: 1208 LRSGNLWIIHPFM-NHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQFWINAKTSYPE 1266
Query: 527 LAKTALEILMPFATTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQK 586
L + A++ L+PF+T YLC+ FS+L ++K ++ +R+A++ +PR ++++K
Sbjct: 1267 LHERAMKFLLPFSTVYLCDAAFSALT--ESKQKNLLGSGPALRLAVTSLIPRIEKLVKEK 1324
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 290 bits (743), Expect = 2e-78
Identities = 180/552 (32%), Positives = 298/552 (53%), Gaps = 31/552 (5%)
Query: 49 DHFNRQHGGVAGHDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNP 108
DHF ++ N ++ P +S T+ + L +SY AY AKEK
Sbjct: 34 DHFQKER--------NKVESSPQVLSRSTTMN--------ERALLSSYLVAYRVAKEKMA 77
Query: 109 HTVAEKLVKPCALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKAS 168
HT AEK++ P +++ + + + KL+ +PLSD+ I RI +++ + ++ ++ S
Sbjct: 78 HTAAEKIILPACMDMVRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQ-S 136
Query: 169 PLKVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFL 228
+ IQL E+TD+ C L+ +VRY+ + + VE+ L C L + G+D+F + L
Sbjct: 137 GIDFAIQLDESTDIASCPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLL 196
Query: 229 -KHKIALDVCGSVCTDGASSMLGENSEFVAYVKKEIPHIVV-THCLLNPHALVIKTLPTK 286
++K+ C + +DG ++M G++S + + + V HC ++ ALV K +
Sbjct: 197 GQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPS 256
Query: 287 LRDALFTVVRVINFIKGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEM 346
L D L V+ +NFIKG + N RL + F EIG+ ++ LLFHTE+RWLS+G++L+ ++E+
Sbjct: 257 LMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYEL 316
Query: 347 YEEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLS 406
EI FL K S+L + FE+ + LAYL+D+F LNELS MQ + E +
Sbjct: 317 RNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHIL 376
Query: 407 AFVRKFPFWQKRIEKRNFTNFPF------LEEIIVSDNEGIFIAAEITLHLQQLSNFFHG 460
F + WQ R++ + + F +EE I++++ I EI LHL LS F+
Sbjct: 377 GFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNY 436
Query: 461 YFSIGDLNEASK--WILDPFLF-NIDFVDDSYL---MKNDLAELRASGQILMEFETMKLE 514
YF + W+ DPF F N + + + L +N+L +L +S + ++ + L
Sbjct: 437 YFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLS 496
Query: 515 DFWCAQFTAFPNLAKTALEILMPFATTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISK 574
FW FP L++ ++ +L+PF TTYLCELGFS L KTK R+ N + D+RVA+S
Sbjct: 497 AFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSS 556
Query: 575 KVPRFSDIIEQK 586
VP + +++ ++
Sbjct: 557 CVPDWKELMNRQ 568
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 145 bits (367), Expect = 8e-35
Identities = 108/425 (25%), Positives = 206/425 (48%), Gaps = 20/425 (4%)
Query: 150 IDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKER-EIVEEFLFCE 208
+++++ ++ +++ E I+ S + I + E TD+++ +QL F+R + E ++ EE L
Sbjct: 526 VEDLAGNLWEKLREKIR-SFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTV 584
Query: 209 PLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGENSEFVAYVKKEIP---- 264
P+ + G ++F+ K I SV + G +M+ N+ V +K +
Sbjct: 585 PMTGTKSGNEIFSRVEKSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCK 644
Query: 265 --HIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIKGRAPNHRLFQAFFEEIGIEY 322
+ C+++P +L + L K+ + VV+ +N+I R NH F E+ +Y
Sbjct: 645 GAELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQY 702
Query: 323 SVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFK 382
LL++TE++WLSRG +L FE EEI+ F+ + L + ++ LA+L D+
Sbjct: 703 GSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQ-LSSIDWIRDLAFLVDMTM 761
Query: 383 HLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEKRNFTNFPFLEEIIVSDNEGIF 442
HLN L+ S+Q + + AF+ K W+ + + N +FP L+ ++++G+
Sbjct: 762 HLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLASRNESDGLN 821
Query: 443 IAAEITLHLQQLSNFFHGYFSIGDLNEASKWIL-DPFLFNIDFVDDSYLMKNDLAELRAS 501
+I +L F S L E+ + PF ID V + M ++ +L+ +
Sbjct: 822 YIPKIA----ELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQM--EVIDLQCN 875
Query: 502 GQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFATTYLCELGFSSLLHFKTKSRSC 561
+ +++ + + +F+ + ++P +IL F +TY+CE FS + KTK C
Sbjct: 876 TVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTK--YC 933
Query: 562 FNLSD 566
L D
Sbjct: 934 SQLKD 938
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 145 bits (366), Expect = 1e-34
Identities = 108/425 (25%), Positives = 206/425 (48%), Gaps = 20/425 (4%)
Query: 150 IDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKER-EIVEEFLFCE 208
+++++ ++ +++ E I+ S + I + E TD+++ +QL F+R + E ++ EE L
Sbjct: 526 VEDLAGNLWEKLREKIR-SFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTV 584
Query: 209 PLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGENSEFVAYVKKEIP---- 264
P+ + G ++F K I SV + G +M+ N+ V +K +
Sbjct: 585 PMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCK 644
Query: 265 --HIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIKGRAPNHRLFQAFFEEIGIEY 322
+ C+++P +L + L K+ + VV+ +N+I R NH F E+ +Y
Sbjct: 645 GAELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQY 702
Query: 323 SVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFK 382
LL++TE++WLSRG +L FE EEI+ F+ + L + ++ LA+L D+
Sbjct: 703 GSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQ-LSSIDWIRDLAFLVDMTM 761
Query: 383 HLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEKRNFTNFPFLEEIIVSDNEGIF 442
HLN L+ S+Q + + AF+ K W+ + + N +FP L+ + ++++G+
Sbjct: 762 HLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLN 821
Query: 443 IAAEITLHLQQLSNFFHGYFSIGDLNEASKWIL-DPFLFNIDFVDDSYLMKNDLAELRAS 501
+I +L F S L E+ + PF ID V + M ++ +L+ +
Sbjct: 822 YIPKIA----ELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQM--EVIDLQCN 875
Query: 502 GQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFATTYLCELGFSSLLHFKTKSRSC 561
+ +++ + + +F+ + ++P +IL F +TY+CE FS + KTK C
Sbjct: 876 TVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTK--YC 933
Query: 562 FNLSD 566
L D
Sbjct: 934 SQLKD 938
>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
Length = 607
Score = 101 bits (252), Expect = 2e-21
Identities = 108/476 (22%), Positives = 210/476 (44%), Gaps = 26/476 (5%)
Query: 130 PDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLE---DIKASPLKVGIQLAETTDMDDCS 186
P+ LQ V LS D+ RI + +++ Q+ D KA L + Q + +
Sbjct: 134 PEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYE----N 189
Query: 187 QLMAFVRYI-KEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGA 245
L+ F+R + E E+ E+ L L + + + ++L + T
Sbjct: 190 YLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHT 249
Query: 246 SSMLGENSEFVAYVKKEI--PHIV-VTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIK 302
M+GENS V+Y++++ P+ V H H ++ + + + T+ I IK
Sbjct: 250 LRMIGENSGLVSYMREKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIK 309
Query: 303 GRAPNHRLFQAFFEEIGIEYSVLLFHTEMR-WLSRGQILTHIFEMYEEINQFLHHKSSNL 361
R FQ E E+ + + WL RG+ L IF + +E+ FL +
Sbjct: 310 TRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVSVGATT 369
Query: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421
V F +K++ +L D+ +HL ELS ++ + + +A + + F K +Q+ IE+
Sbjct: 370 VH-FSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEE 428
Query: 422 RNFTNFPFLEEII------VSDNEGIFIAAEITLHLQQLSNFFHGYF-SIGDLNEASKWI 474
+N T+FP L E++ ++E IF + + +L F +F + + + +
Sbjct: 429 KNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELF 488
Query: 475 LDPFLFNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCA-QFTAFPNLAKTALE 533
+PF F ++ S ++ +L +L+A+ + E+ L F+ ++P + A +
Sbjct: 489 SNPFNFKPEYAPIS--VRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACK 546
Query: 534 ILMPFATTYLCELGFSSLL---HFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQK 586
+ F + +CE FS L H ++ + +L RVA ++ P + D++ ++
Sbjct: 547 VASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVATTEMEPGWDDLVRER 602
>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
Length = 787
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 241 CTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINF 300
C+DGA+++LG S + + P I++ +CL H L + D + ++ IN
Sbjct: 388 CSDGANTILGRKSGVATKLLENFPEIIIWNCL--NHRLQLSL------DDSISEIKQINH 439
Query: 301 IK---------GRAPNH---RLFQAFFEEIGIEYSVLLFHTEMRWLSRG-QILTHIFEMY 347
+K PN +L +E+ E + RW + Q T ++ Y
Sbjct: 440 LKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWAACSLQAATAVWHAY 499
Query: 348 EEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSA 407
+ H S L N F LA + D+ + + LS ++Q N A++ +
Sbjct: 500 PILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTALQSRSTNIKKAQKLIKR 559
Query: 408 FVR 410
+R
Sbjct: 560 TIR 562
>gi|149773449 zinc finger protein 862 [Homo sapiens]
Length = 1169
Score = 41.2 bits (95), Expect = 0.003
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 150 IDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEP 209
I +S+ + +++LED++ SP V + L +TD + + + ++RY K+ E+ E ++ P
Sbjct: 603 IKYISETLKREILEDVRNSPC-VSVLLDSSTDASEQACVGIYIRYFKQMEVKESYITLAP 661
Query: 210 LQLSMKGIDVFNLFRDFFLKHKIALDVCGSVC---TDGASSMLGENSEFVAYVKKEIPHI 266
L S F + I G V TDG S+ML V ++ IP +
Sbjct: 662 L-YSETADGYFETIVSALDELDIPFRKPGWVVGLGTDG-SAMLSCRGGLVEKFQEVIPQL 719
Query: 267 VVTHCL 272
+ HC+
Sbjct: 720 LPVHCV 725
>gi|115511057 hypothetical protein LOC256643 [Homo sapiens]
Length = 682
Score = 32.0 bits (71), Expect = 1.7
Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 67 KHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKL-------VKPC 119
K + D +T+ F VAS T Q S+ + K +N H V E L KP
Sbjct: 409 KSLTVKVDVKKTVDTFRVASSYSTERQMSHDLVAVGRKSENFHPVFEHLDSTQNTENKPT 468
Query: 120 ALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAET 179
E AQ ++ Q K P +H R M QDI + D+ PL ++
Sbjct: 469 G-EFAQEIITIIHQVKANYFPSPGITLHERFSTM-QDIHK---ADVNEIPLNSDPEIHRR 523
Query: 180 TDM 182
DM
Sbjct: 524 IDM 526
>gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens]
Length = 2986
Score = 30.4 bits (67), Expect = 4.8
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 51 FNRQHGGVAGHDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHT 110
F +H GV G L+ + + D E + A ++ D LL+A+ Q A E +P
Sbjct: 559 FLSKHTGV-GKSLHRARALQKRHDDFEEV-AQNTYTNADKLLEAAEQLAQ--TGECDPEE 614
Query: 111 VAEKLVKPCALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPL 170
+ K + + I V + +K L + +S + +D+ +++LED+ A +
Sbjct: 615 IY-KAARHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSV 673
Query: 171 KVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQL 212
+L + + L A + IKE E + + L P L
Sbjct: 674 DAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSAPPSL 715
>gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens]
Length = 1663
Score = 30.4 bits (67), Expect = 4.8
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Query: 51 FNRQHGGVAGHDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHT 110
F +H GV G L+ + + D E + A ++ D LL+A+ Q A E +P
Sbjct: 559 FLSKHTGV-GKSLHRARALQKRHDDFEEV-AQNTYTNADKLLEAAEQLAQ--TGECDPEE 614
Query: 111 VAEKLVKPCALEIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPL 170
+ K + + I V + +K L + +S + +D+ +++LED+ A +
Sbjct: 615 IY-KAARHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSV 673
Query: 171 KVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQL 212
+L + + L A + IKE E + + L P L
Sbjct: 674 DAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSAPPSL 715
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 30.4 bits (67), Expect = 4.8
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 338 QILTHIFEMYEEINQFLHHKSSNLVDGFENKEFKI-----------HLAYLADLFKHLNE 386
Q +TH F+ +E+N + + NL D E+ ++ H + +L K E
Sbjct: 2687 QDITHFFQQIQELNLEMEDQQENL-DTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTE 2745
Query: 387 LSASMQRTGMNTVSAREKLSAF---VRKFPFWQKRIE 420
L +++ + S +E+L F VR F W K E
Sbjct: 2746 LQKTVKEREKDASSCQEQLDEFRKLVRTFQKWLKETE 2782
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 30.4 bits (67), Expect = 4.8
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 338 QILTHIFEMYEEINQFLHHKSSNLVDGFENKEFKI-----------HLAYLADLFKHLNE 386
Q +TH F+ +E+N + + NL D E+ ++ H + +L K E
Sbjct: 2185 QDITHFFQQIQELNLEMEDQQENL-DTLEHLVTELSSCGFALDLCQHQDRVQNLRKDFTE 2243
Query: 387 LSASMQRTGMNTVSAREKLSAF---VRKFPFWQKRIE 420
L +++ + S +E+L F VR F W K E
Sbjct: 2244 LQKTVKEREKDASSCQEQLDEFRKLVRTFQKWLKETE 2280
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 30.4 bits (67), Expect = 4.8
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 361 LVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIE 420
+ +EF+ A L +L + +LS +++ G+ S R+K++ ++F QK +
Sbjct: 1 MAQALSEEEFQRMQAQLLELRTNNYQLSDELRKNGVELTSLRQKVAYLDKEFSKAQKALS 60
Query: 421 KRNFTNFPFLEEIIVSDNEGIFIAAEITLHLQQ 453
K E+++S+NE + + LH Q+
Sbjct: 61 KSKKAQ---EVEVLLSENEML----QAKLHSQE 86
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 30.4 bits (67), Expect = 4.8
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 361 LVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIE 420
+ +EF+ A L +L + +LS +++ G+ S R+K++ ++F QK +
Sbjct: 1 MAQALSEEEFQRMQAQLLELRTNNYQLSDELRKNGVELTSLRQKVAYLDKEFSKAQKALS 60
Query: 421 KRNFTNFPFLEEIIVSDNEGIFIAAEITLHLQQ 453
K E+++S+NE + + LH Q+
Sbjct: 61 KSKKAQ---EVEVLLSENEML----QAKLHSQE 86
>gi|23510377 KN motif and ankyrin repeat domains 1 isoform b [Homo
sapiens]
Length = 1194
Score = 30.0 bits (66), Expect = 6.3
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 156 DILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMK 215
++ QQ +E +K ++ +QL ETT + ++L ++ R+ V++ +PL S K
Sbjct: 298 ELQQQTIESLKEKIYRLEVQLRETTHDREMTKLKQELQAAGSRKKVDKATMAQPLVFS-K 356
Query: 216 GIDVFNLFRDFFL-KHKIALDVC 237
++ RD + H +D C
Sbjct: 357 VVEAVVQTRDQMVGSHMDLVDTC 379
>gi|64464726 KN motif and ankyrin repeat domains 1 isoform a [Homo
sapiens]
Length = 1352
Score = 30.0 bits (66), Expect = 6.3
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 156 DILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMK 215
++ QQ +E +K ++ +QL ETT + ++L ++ R+ V++ +PL S K
Sbjct: 456 ELQQQTIESLKEKIYRLEVQLRETTHDREMTKLKQELQAAGSRKKVDKATMAQPLVFS-K 514
Query: 216 GIDVFNLFRDFFL-KHKIALDVC 237
++ RD + H +D C
Sbjct: 515 VVEAVVQTRDQMVGSHMDLVDTC 537
>gi|21071067 TBP-associated factor 5 [Homo sapiens]
Length = 800
Score = 30.0 bits (66), Expect = 6.3
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 134 KKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKV 172
KKL+ V + D+ S ID+ S D+L++++++ AS LK+
Sbjct: 502 KKLRSVKQASDL--SLIDKESDDVLERIMDEKTASELKI 538
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 30.0 bits (66), Expect = 6.3
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 48 SDHFNRQHGGVAGHDLNSLKHMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKN 107
S +NR+HGG G D + + S+ +E + F + +++LL+ Y + + +
Sbjct: 5 SADYNREHGGPEGMDPDGV----IESNWNEIVDNFDDMNLKESLLRGIYAYGF-----EK 55
Query: 108 PHTVAEKLVKPC 119
P + ++ + PC
Sbjct: 56 PSAIQQRAIIPC 67
>gi|157694513 leucine-rich repeat-containing G protein-coupled
receptor 4 [Homo sapiens]
Length = 951
Score = 30.0 bits (66), Expect = 6.3
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 394 TGMNTVSAREKLSAFVRKFPFWQKRIEKRN---FTNFPFLEEIIVSDNEGIFIAAEITLH 450
+G + E LSAF + I + F NFPFLEE+ ++ N+ FI +
Sbjct: 44 SGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGNDLSFIHPKALSG 103
Query: 451 LQQL 454
L++L
Sbjct: 104 LKEL 107
>gi|88953346 PREDICTED: Tripartite motif-containing protein 43-like
protein 1 [Homo sapiens]
Length = 446
Score = 29.6 bits (65), Expect = 8.2
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 308 HRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLV 362
H+ + E + EY + + W+ Q H+ EMY+E+ + H L+
Sbjct: 191 HKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELMEMCHKPEVELL 245
>gi|40805852 thrombospondin type I domain-containing 1 isoform 2
[Homo sapiens]
Length = 799
Score = 29.6 bits (65), Expect = 8.2
Identities = 23/86 (26%), Positives = 34/86 (39%)
Query: 21 EVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHDLNSLKHMPAPSDQSETLK 80
E GT+ P L S LR L DH G+ + + + P+PS +S + K
Sbjct: 661 EASGTRGPLNPLPKSYTLGQPLRKPDLGDHQAGLVAGIERTEPHRARRGPSPSHKSVSRK 720
Query: 81 AFGVASHEDTLLQASYQFAYLCAKEK 106
S +D + S C K+K
Sbjct: 721 QSSPISPKDNYQRVSSLSPSQCRKDK 746
>gi|8923894 thrombospondin type I domain-containing 1 isoform 1
[Homo sapiens]
Length = 852
Score = 29.6 bits (65), Expect = 8.2
Identities = 23/86 (26%), Positives = 34/86 (39%)
Query: 21 EVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHDLNSLKHMPAPSDQSETLK 80
E GT+ P L S LR L DH G+ + + + P+PS +S + K
Sbjct: 714 EASGTRGPLNPLPKSYTLGQPLRKPDLGDHQAGLVAGIERTEPHRARRGPSPSHKSVSRK 773
Query: 81 AFGVASHEDTLLQASYQFAYLCAKEK 106
S +D + S C K+K
Sbjct: 774 QSSPISPKDNYQRVSSLSPSQCRKDK 799
>gi|113205089 zinc finger, MYM domain containing 1 [Homo sapiens]
Length = 1142
Score = 29.6 bits (65), Expect = 8.2
Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 17/170 (10%)
Query: 141 LSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKERE- 199
+ D+I EM QDI+ ++ + S I ET + QL VRY ++
Sbjct: 617 IQSDIIEIIKTEMLQDIVNEINDSSAFS-----IICDETINSAMKEQLSICVRYPQKSSK 671
Query: 200 ---IVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGENSEFV 256
I E FL + M G + + + + + +D D +++ + ++
Sbjct: 672 AILIKERFLGFVDTE-EMTGTHLHRTIKTYLQQIGVDMDKIHGQAYDSTTNLKIKFNKIA 730
Query: 257 AYVKKEIPHIVVTHCLLNPHALVIKTL-----PTKLRDALFTVVRVINFI 301
A KKE P + HC H L + + +LR AL T+ + N I
Sbjct: 731 AEFKKEEPRALYIHCY--AHFLDLSIIRFCKEVKELRSALKTLSSLFNTI 778
>gi|6912500 phosphatidylinositol glycan anchor biosynthesis, class N
[Homo sapiens]
Length = 931
Score = 29.6 bits (65), Expect = 8.2
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 194 YIKEREIVEEFLFCEPL-QLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGEN 252
YIK R+ E C+ L L++KG+ ++ + FFL + + G + + + ++ +
Sbjct: 408 YIKHRKFDEVVSLCKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWI-SYASLLIIKSH 466
Query: 253 SEFVAYVKKEI 263
S + V KE+
Sbjct: 467 SNLIKGVSKEV 477
>gi|29029537 phosphatidylinositol glycan anchor biosynthesis, class
N [Homo sapiens]
Length = 931
Score = 29.6 bits (65), Expect = 8.2
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 194 YIKEREIVEEFLFCEPL-QLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGEN 252
YIK R+ E C+ L L++KG+ ++ + FFL + + G + + + ++ +
Sbjct: 408 YIKHRKFDEVVSLCKELIHLALKGLSYYHTYDRFFLGVNVVIGFVGWI-SYASLLIIKSH 466
Query: 253 SEFVAYVKKEI 263
S + V KE+
Sbjct: 467 SNLIKGVSKEV 477
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,433,364
Number of Sequences: 37866
Number of extensions: 847070
Number of successful extensions: 2593
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2532
Number of HSP's gapped (non-prelim): 36
length of query: 594
length of database: 18,247,518
effective HSP length: 108
effective length of query: 486
effective length of database: 14,157,990
effective search space: 6880783140
effective search space used: 6880783140
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.