Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPM2AIP1 Sequence: fasta or formatted (607aa) NCBI GI: 7662294
Description:

EPM2A interacting protein 1

Referenced in:

Dual-Specificity Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         37           4
 C cysteine            1.8         11           1
 D aspartate           5.1         31           2
 E glutamate           9.6         58           2
 F phenylalanine       5.1         31           1
 G glycine             4.8         29           1
 H histidine           2.6         16           2
 I isoleucine          4.4         27           2
 K lysine              4.3         26           2
 L leucine            12.5         76           2
 M methionine          2.0         12           1
 N asparagine          4.1         25           2
 P proline             3.3         20           2
 Q glutamine           4.0         24           2
 R arginine            8.2         50           2
 S serine              5.4         33           2
 T threonine           4.6         28           3
 V valine              7.6         46           2
 W tryptophan          1.5          9           1
 Y tyrosine            3.0         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EPM2A interacting protein 1 
GTF2IRD2              0.151   GTF2I repeat domain containing 2 
GTF2IRD2B             0.151   GTF2I repeat domain containing 2B 
ZBED5                 0.074   zinc finger, BED-type containing 5 
ZBED5                 0.074   zinc finger, BED-type containing 5 
LOC285550             0.071   hypothetical protein LOC285550 
C7orf38               0.069   hypothetical protein LOC221786 
C5orf54               0.064   transposon-derived Buster3 transposase-like 
ZMYM6                 0.063   zinc finger protein 258 
SCAND3                0.060   SCAN domain containing 3 
LOC65998              0.007   hypothetical protein LOC65998 
C11orf84              0.006   hypothetical protein LOC144097 
HIP1                  0.006   huntingtin interacting protein 1 
FAM13B                0.006   hypothetical protein LOC51306 isoform 3 
FAM13B                0.006   hypothetical protein LOC51306 isoform 2 
FAM13B                0.006   hypothetical protein LOC51306 isoform 1 
CENPE                 0.005   centromere protein E 
SSH2                  0.004   slingshot 2 
MSLNL                 0.004   mesothelin-like 
CCDC138               0.004   coiled-coil domain containing 138 
C10orf93              0.004   hypothetical protein LOC255352 
ARHGEF7               0.004   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.004   PAK-interacting exchange factor beta isoform a 
TDRD6                 0.004   tudor domain containing 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press