Guide to the Human Genome
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Name: CXorf23 Sequence: fasta or formatted (682aa) NCBI GI: 115511057
Description:

hypothetical protein LOC256643

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         21           2
 C cysteine            0.9          6           1
 D aspartate           6.5         44           2
 E glutamate           7.8         53           2
 F phenylalanine       3.4         23           1
 G glycine             5.1         35           2
 H histidine           4.5         31           1
 I isoleucine          4.4         30           2
 K lysine              9.4         64           3
 L leucine             4.0         27           2
 M methionine          1.2          8           1
 N asparagine          4.5         31           1
 P proline             6.5         44           2
 Q glutamine           5.3         36           1
 R arginine           10.4         71           3
 S serine              9.5         65           3
 T threonine           4.4         30           2
 V valine              3.7         25           1
 W tryptophan          0.9          6           1
 Y tyrosine            4.7         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC256643 
THRAP3                0.057   thyroid hormone receptor associated protein 3 [Homo...
BCLAF1                0.057   BCL2-associated transcription factor 1 isoform 2 [H...
BCLAF1                0.057   BCL2-associated transcription factor 1 isoform 1 [Hom...
BCLAF1                0.056   BCL2-associated transcription factor 1 isoform 3 [H...
LOC731605             0.054   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.054   PREDICTED: similar to BCL2-associated transcription...
BOD1L                 0.026   biorientation of chromosomes in cell division 1-like...
PPIG                  0.018   peptidylprolyl isomerase G 
ZC3H13                0.016   zinc finger CCCH-type containing 13 
RBBP6                 0.014   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.014   retinoblastoma-binding protein 6 isoform 1 
SYTL2                 0.014   synaptotagmin-like 2 isoform i 
SFRS4                 0.013   splicing factor, arginine/serine-rich 4 
HRC                   0.012   histidine rich calcium binding protein precursor [Hom...
PRPF38B               0.011   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
SYTL2                 0.011   synaptotagmin-like 2 isoform a 
SYTL2                 0.011   synaptotagmin-like 2 isoform g 
FLG                   0.010   filaggrin 
SMARCA4               0.010   SWI/SNF-related matrix-associated actin-dependent r...
YBX1                  0.009   nuclease sensitive element binding protein 1 
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
SRRM2                 0.009   splicing coactivator subunit SRm300 
CALD1                 0.009   caldesmon 1 isoform 3 
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent re...
LOC100133599          0.009   PREDICTED: hypothetical protein 
SPEN                  0.008   spen homolog, transcriptional regulator 
CCDC55                0.008   coiled-coil domain containing 55 isoform 1 
CROP                  0.008   cisplatin resistance-associated overexpressed protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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