| Name: GTF2IRD2 | Sequence: fasta or formatted (949aa) | NCBI GI: 48762700 | |
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Description: GTF2I repeat domain containing 2
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Referenced in: RNA Polymerase and General Transcription Factors
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.1 48 2 C cysteine 2.5 24 2 D aspartate 4.5 43 1 E glutamate 8.9 84 3 F phenylalanine 4.3 41 2 G glycine 4.8 46 2 H histidine 2.0 19 2 I isoleucine 5.6 53 2 K lysine 7.5 71 2 L leucine 9.2 87 2 M methionine 2.8 27 1 N asparagine 3.9 37 2 P proline 4.8 46 2 Q glutamine 3.7 35 1 R arginine 3.8 36 2 S serine 8.9 84 3 T threonine 5.2 49 2 V valine 8.1 77 3 W tryptophan 1.1 10 1 Y tyrosine 3.4 32 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 GTF2I repeat domain containing 2 GTF2IRD2B 0.993 GTF2I repeat domain containing 2B GTF2I 0.238 general transcription factor II, i isoform 2 GTF2I 0.232 general transcription factor II, i isoform 1 GTF2I 0.228 general transcription factor II, i isoform 4 GTF2I 0.222 general transcription factor II, i isoform 3 EPM2AIP1 0.096 EPM2A interacting protein 1 GTF2IRD1 0.083 GTF2I repeat domain containing 1 isoform 1 GTF2IRD1 0.083 GTF2I repeat domain containing 1 isoform 2 SCAND3 0.070 SCAN domain containing 3 ZMYM6 0.070 zinc finger protein 258 ZBED5 0.069 zinc finger, BED-type containing 5 ZBED5 0.069 zinc finger, BED-type containing 5 LOC100288291 0.066 PREDICTED: hypothetical protein XP_002344174 LOC285550 0.064 hypothetical protein LOC285550 C5orf54 0.064 transposon-derived Buster3 transposase-like C7orf38 0.059 hypothetical protein LOC221786 LOC100291900 0.049 PREDICTED: similar to hCG2006635, partial LOC100290207 0.049 PREDICTED: hypothetical protein XP_002348308, parti... LOC641765 0.034 PREDICTED: similar to hCG1983816 LOC641765 0.034 PREDICTED: similar to hCG1983816 LOC641765 0.034 PREDICTED: similar to hCG1983816 LOC100132733 0.009 PREDICTED: similar to FLJ00310 protein CSPP1 0.005 centrosome spindle pole associated protein 1 isofor... CSPP1 0.005 centrosome spindle pole associated protein 1 isofor... PRKRIR 0.005 protein-kinase, interferon-inducible double stranded... CGNL1 0.005 cingulin-like 1 ATXN2 0.004 ataxin 2 MYOM3 0.004 myomesin family, member 3 RAPH1 0.004 Ras association and pleckstrin homology domains 1 is...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
