BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|28912912 NK6 transcription factor related, locus 2 [Homo sapiens] (277 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi... 566 e-162 gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 331 4e-91 gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 96 4e-20 gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 91 1e-18 gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 82 4e-16 gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 82 5e-16 gi|11386181 H2.0-like homeobox [Homo sapiens] 82 5e-16 gi|157743259 H6 family homeobox 3 [Homo sapiens] 82 7e-16 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 81 9e-16 gi|70608170 H6 family homeobox 2 [Homo sapiens] 80 1e-15 gi|89257348 homeo box HB9 [Homo sapiens] 80 1e-15 gi|118582284 msh homeobox 1 [Homo sapiens] 80 2e-15 gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 80 3e-15 gi|226437602 NK1 homeobox 2 [Homo sapiens] 78 7e-15 gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 78 7e-15 gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 78 7e-15 gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 78 7e-15 gi|94536800 empty spiracles homolog 1 [Homo sapiens] 78 7e-15 gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 78 1e-14 gi|4502365 NK3 homeobox 2 [Homo sapiens] 78 1e-14 gi|14149611 empty spiracles homeobox 2 [Homo sapiens] 76 3e-14 gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 74 1e-13 gi|22749179 NK6 homeobox 3 [Homo sapiens] 74 1e-13 gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] 74 1e-13 gi|23397672 homeobox D4 [Homo sapiens] 72 5e-13 gi|24497538 homeobox C4 [Homo sapiens] 72 5e-13 gi|24497540 homeobox C4 [Homo sapiens] 72 5e-13 gi|153218470 BarH-like homeobox 1 [Homo sapiens] 72 5e-13 gi|4885185 distal-less homeobox 3 [Homo sapiens] 72 7e-13 gi|4758168 distal-less homeobox 2 [Homo sapiens] 72 7e-13 >gi|28912912 NK6 transcription factor related, locus 2 [Homo sapiens] Length = 277 Score = 567 bits (1460), Expect = e-162 Identities = 277/277 (100%), Positives = 277/277 (100%) Query: 1 MDTNRPGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGI 60 MDTNRPGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGI Sbjct: 1 MDTNRPGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGI 60 Query: 61 SDILGRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPG 120 SDILGRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPG Sbjct: 61 SDILGRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPG 120 Query: 121 VVQGAPWRDPRLAGPAPAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERAR 180 VVQGAPWRDPRLAGPAPAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERAR Sbjct: 121 VVQGAPWRDPRLAGPAPAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERAR 180 Query: 181 LAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNR 240 LAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNR Sbjct: 181 LAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNR 240 Query: 241 PLDPNSDDEKITRLLKKHKPSNLALVSPCGGGAGDAL 277 PLDPNSDDEKITRLLKKHKPSNLALVSPCGGGAGDAL Sbjct: 241 PLDPNSDDEKITRLLKKHKPSNLALVSPCGGGAGDAL 277 >gi|111120318 NK6 transcription factor related, locus 1 [Homo sapiens] Length = 367 Score = 331 bits (849), Expect = 4e-91 Identities = 189/356 (53%), Positives = 215/356 (60%), Gaps = 89/356 (25%) Query: 1 MDTNRPGAFVLSSAPLAALHNMAEMKTSLFPYAL-------------------------- 34 M+ R AF+LSS PLAALH+MAEMKT L+P A Sbjct: 7 MEGTRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGT 66 Query: 35 QGPAGFKAPALGGLGA------QLPLGTPHGISDILGRP--------------------- 67 P G K PA GGL + QL TPHGI+DIL RP Sbjct: 67 HNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSS 126 Query: 68 ----------------------VGAAGGGLLGGLPRLNGLASSA---GVYFGPAAAVARG 102 ++ GLL GLPR + L+ G+YF P+AA Sbjct: 127 SSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAA 186 Query: 103 ---YPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVL-DKDGKKKHSRPTFSGQ 158 YPKPLAELPGR PIFWPGV+Q PWRD RLA G +L DKDGK+KH+RPTFSGQ Sbjct: 187 VGRYPKPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQ 246 Query: 159 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQ 218 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK+HAAEMA+AKKKQ Sbjct: 247 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQ 306 Query: 219 DSDAEKLKVGGSDAEDDDEYNRPLDPNSDDEKITRLLKKHKPSNLALVSPCGGGAG 274 DS+ E+LK + E+DD+YN+PLDPNSDDEKIT+LLKKHK S+ GGG G Sbjct: 307 DSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKHKSSS-------GGGGG 355 >gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] Length = 330 Score = 95.5 bits (236), Expect = 4e-20 Identities = 83/202 (41%), Positives = 102/202 (50%), Gaps = 20/202 (9%) Query: 32 YALQGPAGFKAPALGGLGAQL-PLGTPHGISDIL-GRPVGAAGGGLLGGLPRLNGLASSA 89 Y GP G PA GG + PL + ++ L G P GGG GG G S+A Sbjct: 74 YGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGA----GALSAA 129 Query: 90 GVYFGPA---AAVARGYPKPLAE-LPGRPPI-FWPGV--VQGA--PWRDP--RLAGPAPA 138 GV PA A A +P+PLA LP P + PGV + G PW + R Sbjct: 130 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFT 189 Query: 139 GGVLDK--DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 196 G KKK R +F+ QI LEK F + KYLA ERA LA +L MT++QVK WF Sbjct: 190 GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWF 249 Query: 197 QNRRTKWRKRHAAEMASAKKKQ 218 QNRRTKWR R AE A+++Q Sbjct: 250 QNRRTKWR-RQTAEEREAERQQ 270 >gi|116805350 homeo box (H6 family) 1 [Homo sapiens] Length = 348 Score = 90.9 bits (224), Expect = 1e-18 Identities = 68/186 (36%), Positives = 89/186 (47%), Gaps = 23/186 (12%) Query: 31 PYALQ--GPAGFKAPALGGLGAQLPLGTPHGISDILGRPVGAAGGGLLGGLPRLNGLASS 88 P+AL G A + A GG G L T S G +G A G G Sbjct: 105 PFALGCGGAARWYPRAHGGYGGGLSPDTSDRDSPETGEEMGRAEGAWPRGP--------- 155 Query: 89 AGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVLDKDGKK 148 GP A + AEL R P G + + + A GGV G+K Sbjct: 156 -----GPGAV-----QREAAELAARGPA--AGTEEASELAEVPAAAGETRGGVGVGGGRK 203 Query: 149 KHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHA 208 K +R FS Q+F LE TF+ +YL+ ERA LA SL +TE+QVK+WFQNRR KW+++ A Sbjct: 204 KKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQLA 263 Query: 209 AEMASA 214 AE+ +A Sbjct: 264 AELEAA 269 >gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] Length = 284 Score = 82.4 bits (202), Expect = 4e-16 Identities = 71/200 (35%), Positives = 93/200 (46%), Gaps = 34/200 (17%) Query: 46 GGLGAQLPLGTPHGISDIL-GRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYP 104 GGLG G HG + G GA+G G G L L G S+GV GP + Sbjct: 33 GGLGLGRG-GQGHGENGAFSGGYHGASGYGPAGSLAPLPG---SSGV--GPGGVIRVPAH 86 Query: 105 KPLAELP---GRPPIFWPGVVQGA--------PW--------RDPRLAGPAPAGGVLD-- 143 +PL P G P + P + GA PW +D A +P G Sbjct: 87 RPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIG 146 Query: 144 ------KDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 197 K+K R +FS Q+ LE+ F + KYLA ERA LA +L MT++QVK WFQ Sbjct: 147 HPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQ 206 Query: 198 NRRTKWRKRHAAEMASAKKK 217 NRRTKWR++ A E + + + Sbjct: 207 NRRTKWRRQTAEEREAERHR 226 >gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] Length = 411 Score = 82.0 bits (201), Expect = 5e-16 Identities = 61/165 (36%), Positives = 77/165 (46%), Gaps = 26/165 (15%) Query: 65 GRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGY-PKPLAELPGRPPIFWPGVVQ 123 G GGG LG R +G +A P A V P P P V Q Sbjct: 172 GAEEARGGGGGLGA--RGSGCQGAAETDASPGATVDEAAAPGPRENSP---------VAQ 220 Query: 124 GAPW--RDPRLAGPAPAG------------GVLDKDGKKKHSRPTFSGQQIFALEKTFEQ 169 G P P AG P G G K GK + +R F+ +Q+ ALE F+ Sbjct: 221 GPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKA 280 Query: 170 TKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASA 214 T+YL+ ER LA SL +TE+QVK+WFQNRRTKW+K++ SA Sbjct: 281 TRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSA 325 >gi|11386181 H2.0-like homeobox [Homo sapiens] Length = 488 Score = 82.0 bits (201), Expect = 5e-16 Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 27/178 (15%) Query: 75 LLGGLP---RLNGLASSAGVYFGPAAAV--ARGYPKPLAELPGRPPIFWPGVVQGAPWRD 129 L GG P L+GL SAG +F + A PL P + + Sbjct: 203 LTGGRPAGVHLSGLQPSAGQFFASLDPINEASAILSPLNSNP-----------RNSVQHQ 251 Query: 130 PRLAGPAPAGGVLDKDG-------KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLA 182 + P P VL KD K+ SR FS Q LEK FE KY+ P+R +LA Sbjct: 252 FQDTFPGPYA-VLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLA 310 Query: 183 YSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNR 240 LG+T++QVKVWFQNRR KW RH+ E A A+K +D +A + GG+ A D ++ R Sbjct: 311 AMLGLTDAQVKVWFQNRRMKW--RHSKE-AQAQKDKDKEAGEKPSGGAPAADGEQDER 365 >gi|157743259 H6 family homeobox 3 [Homo sapiens] Length = 357 Score = 81.6 bits (200), Expect = 7e-16 Identities = 37/68 (54%), Positives = 51/68 (75%) Query: 147 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 206 +KK +R FS Q+F LE TF+ +YL+ ERA LA SL +TE+QVK+WFQNRR KW+++ Sbjct: 226 RKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQ 285 Query: 207 HAAEMASA 214 AAE+ +A Sbjct: 286 LAAELEAA 293 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 81.3 bits (199), Expect = 9e-16 Identities = 61/163 (37%), Positives = 77/163 (47%), Gaps = 22/163 (13%) Query: 65 GRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGY-PKPLAELPGRPPIFWPGVVQ 123 G GGG LG R +G +A P A V P P P P G Sbjct: 575 GAEEARGGGGGLGA--RGSGCQGAAETDASPGATVDEAAAPGPRENSPVAP-----GPPG 627 Query: 124 GAPWRDPRLAGPAPAG------------GVLDKDGKKKHSRPTFSGQQIFALEKTFEQTK 171 GA P AG P G G K GK + +R F+ +Q+ ALE F+ T+ Sbjct: 628 GAA--APGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKFKATR 685 Query: 172 YLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASA 214 YL+ ER LA SL +TE+QVK+WFQNRRTKW+K++ SA Sbjct: 686 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSA 728 >gi|70608170 H6 family homeobox 2 [Homo sapiens] Length = 273 Score = 80.5 bits (197), Expect = 1e-15 Identities = 64/182 (35%), Positives = 84/182 (46%), Gaps = 31/182 (17%) Query: 39 GFKAPAL-----GGLGAQLPLGTPHGISDILGRPVGAAGGGLLGGLPRLNGLASSAGVYF 93 G+KAPA G Q P P LG P G+ G G GGL R L+ S + Sbjct: 59 GWKAPACFCPDQHGPKEQGPKHHPPIPFPCLGTPKGSGGSGP-GGLERTPFLSPSHSDFK 117 Query: 94 GPAAAVA-RGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVLDKDGKKKHSR 152 + G P P +E P RD G KK +R Sbjct: 118 EEKERLLPAGSPSPGSERP----------------RD--------GGAERQAGAAKKKTR 153 Query: 153 PTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMA 212 FS Q++ LE TF+ +YL+ ERA LA SL +TE+QVK WFQNRR KW+++ +AE+ Sbjct: 154 TVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELE 213 Query: 213 SA 214 +A Sbjct: 214 AA 215 >gi|89257348 homeo box HB9 [Homo sapiens] Length = 401 Score = 80.5 bits (197), Expect = 1e-15 Identities = 73/216 (33%), Positives = 95/216 (43%), Gaps = 33/216 (15%) Query: 33 ALQGPAGFKAPALGGLGAQLPLGTPHGISDILGRPVGAAGGGLLGGLPRLN-GLASSAGV 91 A A A A GGL L P G G P AA L G P A++A Sbjct: 122 AAAAAAAAAAAAAGGLALGLH---PGGAQGGAGLPAQAA----LYGHPVYGYSAAAAAAA 174 Query: 92 YFGPAAAVARGYPKPLAELPGRP--PI-FWPGVVQGAPWRDPRLAGPAPAGGVLDKD--- 145 G A++ YP+ P P PI G Q W + AG +L K Sbjct: 175 LAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQW-----LRASTAGMILPKMPDF 229 Query: 146 ---------GKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWF 196 GK + R F+ QQ+ LE F+ KYL+ P+R +A SL +TE+QVK+WF Sbjct: 230 NSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWF 289 Query: 197 QNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDA 232 QNRR KW++ AK++ +AEK K GG A Sbjct: 290 QNRRMKWKR-----SKKAKEQAAQEAEKQKGGGGGA 320 >gi|118582284 msh homeobox 1 [Homo sapiens] Length = 303 Score = 80.1 bits (196), Expect = 2e-15 Identities = 73/236 (30%), Positives = 106/236 (44%), Gaps = 42/236 (17%) Query: 6 PGAFVLSSAPLAALHNMAEMKTS--LFPYALQG------PAGFKAPALGGLGAQLPLGTP 57 P A ++A + A A+ K S L P++++ G K AL G Sbjct: 33 PSAAAATAAAMGADEEGAKPKVSPSLLPFSVEALMADHRKPGAKESALAPSEGVQAAG-- 90 Query: 58 HGISDILGRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIF 117 G + LG P G+ G PR G S G+ P A+ + AE P +P Sbjct: 91 -GSAQPLGVPPGSLGAPDAPSSPRPLGHFSVGGLLKLPEDALVK------AESPEKP--- 140 Query: 118 WPGVVQGAPW-RDPRLAGP-----APAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTK 171 + PW + PR + P +P L K + R F+ Q+ ALE+ F Q + Sbjct: 141 -----ERTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTAQLLALERKFRQKQ 195 Query: 172 YLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKV 227 YL+ ERA + SL +TE+QVK+WFQNRR K AK+ Q+++ EKLK+ Sbjct: 196 YLSIAERAEFSSSLSLTETQVKIWFQNRRAK-----------AKRLQEAELEKLKM 240 >gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] Length = 291 Score = 79.7 bits (195), Expect = 3e-15 Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 1/74 (1%) Query: 147 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKR 206 K+K R +FS QI LEK F + KYLA ERA LA SL MT++QVK WFQNRRTKWR R Sbjct: 165 KRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWR-R 223 Query: 207 HAAEMASAKKKQDS 220 AE A+++Q S Sbjct: 224 QTAEEREAERQQAS 237 >gi|226437602 NK1 homeobox 2 [Homo sapiens] Length = 310 Score = 78.2 bits (191), Expect = 7e-15 Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 14/134 (10%) Query: 82 LNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGV 141 L GLA S PA A+A G P E G P+ P G+P R P A Sbjct: 111 LPGLARSPDA---PAGALASGEP---CEDGGGGPVRSPPGSPGSPRPRRRRLEPNCA--- 161 Query: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201 K + +R F+ +Q+ ALE F T+YL+ ER LA SL +TE+QVK+WFQNRRT Sbjct: 162 -----KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 216 Query: 202 KWRKRHAAEMASAK 215 KW+K++ +A+ Sbjct: 217 KWKKQNPGADGAAQ 230 >gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 78.2 bits (191), Expect = 7e-15 Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 14/134 (10%) Query: 82 LNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGV 141 L GLA S PA A+A G P E G P+ P G+P R P A Sbjct: 133 LPGLARSPDA---PAGALASGEP---CEDGGGGPVRSPPGSPGSPRPRRRRLEPNCA--- 183 Query: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201 K + +R F+ +Q+ ALE F T+YL+ ER LA SL +TE+QVK+WFQNRRT Sbjct: 184 -----KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 238 Query: 202 KWRKRHAAEMASAK 215 KW+K++ +A+ Sbjct: 239 KWKKQNPGADGAAQ 252 >gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 78.2 bits (191), Expect = 7e-15 Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 14/134 (10%) Query: 82 LNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGV 141 L GLA S PA A+A G P E G P+ P G+P R P A Sbjct: 133 LPGLARSPDA---PAGALASGEP---CEDGGGGPVRSPPGSPGSPRPRRRRLEPNCA--- 183 Query: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201 K + +R F+ +Q+ ALE F T+YL+ ER LA SL +TE+QVK+WFQNRRT Sbjct: 184 -----KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 238 Query: 202 KWRKRHAAEMASAK 215 KW+K++ +A+ Sbjct: 239 KWKKQNPGADGAAQ 252 >gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 78.2 bits (191), Expect = 7e-15 Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 14/134 (10%) Query: 82 LNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGV 141 L GLA S PA A+A G P E G P+ P G+P R P A Sbjct: 133 LPGLARSPDA---PAGALASGEP---CEDGGGGPVRSPPGSPGSPRPRRRRLEPNCA--- 183 Query: 142 LDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRT 201 K + +R F+ +Q+ ALE F T+YL+ ER LA SL +TE+QVK+WFQNRRT Sbjct: 184 -----KPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRT 238 Query: 202 KWRKRHAAEMASAK 215 KW+K++ +A+ Sbjct: 239 KWKKQNPGADGAAQ 252 >gi|94536800 empty spiracles homolog 1 [Homo sapiens] Length = 290 Score = 78.2 bits (191), Expect = 7e-15 Identities = 78/277 (28%), Positives = 107/277 (38%), Gaps = 40/277 (14%) Query: 6 PGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGISDILG 65 P A + +AP AA K +L G GG GA L + L Sbjct: 20 PRARLPRTAPAAATMFQPAAKRGFTIESLVAKDGGTGGGTGGGGAGSHLLAAAASEEPL- 78 Query: 66 RPVG-------AAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYPKPL-----AELPGR 113 RP AA + G P + +Y GP P A G Sbjct: 79 RPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQLGA 138 Query: 114 PPIFWPGVVQGAPWRDP----------RLAGPAPAGGVLDKDG---------KKKHSRPT 154 P+ P GA RDP R G + +DG K K R Sbjct: 139 SPLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTA 198 Query: 155 FSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAE---M 211 FS Q+ LE+ FE+ Y+ G ER +LA SL ++E+QVKVWFQNRRTK++++ E Sbjct: 199 FSPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPE 258 Query: 212 ASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD 248 + KKK + ++ A +D +D S+D Sbjct: 259 SEQKKKGSHHINRWRIATKQANGED-----IDVTSND 290 >gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 653 Score = 77.8 bits (190), Expect = 1e-14 Identities = 36/71 (50%), Positives = 50/71 (70%) Query: 144 KDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKW 203 K GK + +R F+ +Q+ ALE F+ T+YL+ ER LA SL +TE+QVK+WFQNRRTKW Sbjct: 93 KSGKPRRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKW 152 Query: 204 RKRHAAEMASA 214 +K++ SA Sbjct: 153 KKQNPGADTSA 163 >gi|4502365 NK3 homeobox 2 [Homo sapiens] Length = 333 Score = 77.8 bits (190), Expect = 1e-14 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 9/111 (8%) Query: 134 GPAPAGGVLDKDG------KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGM 187 G PAG +++ +KK SR FS Q+F LE+ F +YL+GPERA LA SL + Sbjct: 186 GSGPAGVAEEEEEPAAPKPRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKL 245 Query: 188 TESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEY 238 TE+QVK+WFQNRR K ++R +MA+ A+K+ V +D +Y Sbjct: 246 TETQVKIWFQNRRYKTKRR---QMAADLLASAPAAKKVAVKVLVRDDQRQY 293 >gi|14149611 empty spiracles homeobox 2 [Homo sapiens] Length = 252 Score = 76.3 bits (186), Expect = 3e-14 Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 13/153 (8%) Query: 104 PKPLAELPGRPP-IFWPGVVQGAPWRDPRLAG--PAPAGGVLDKD--GKKKHSRPTFSGQ 158 P PL R P F+P ++ + R G +P +L K K R FS Sbjct: 105 PHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPS 164 Query: 159 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMAS---AK 215 Q+ LE FE+ Y+ G ER +LA+SL +TE+QVKVWFQNRRTK++++ E S K Sbjct: 165 QLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQK 224 Query: 216 KKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD 248 KK + ++ A ++ +D SDD Sbjct: 225 KKGTHHINRWRIATKQASPEE-----IDVTSDD 252 >gi|4506049 hematopoietically expressed homeobox [Homo sapiens] Length = 270 Score = 74.3 bits (181), Expect = 1e-13 Identities = 71/206 (34%), Positives = 87/206 (42%), Gaps = 36/206 (17%) Query: 43 PALGGLGAQL----PL-----GTPHGISDILGRPVGAAGGGLLGGLPRLNG-LASSAGVY 92 PA G +G L PL TP I DILGR G A LP N S Y Sbjct: 8 PAAGAVGVPLYAPTPLLQPAHPTPFYIEDILGR--GPAAPTPAPTLPSPNSSFTSLVSPY 65 Query: 93 FGP---------------AAAVAR-----GYPKPLAELPGRPPIFWPGVVQGAPWRDPRL 132 P AAA+A G+ PL P + +++ P P L Sbjct: 66 RTPVYEPTPIHPAFSHHSAAALAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLL 125 Query: 133 AGPAPAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQV 192 P + K+K + FS Q LEK FE KYL+ PER RLA L ++E QV Sbjct: 126 WSPFLQRPL----HKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQV 181 Query: 193 KVWFQNRRTKWRKRHAAEMASAKKKQ 218 K WFQNRR KWR+ S KK++ Sbjct: 182 KTWFQNRRAKWRRLKQENPQSNKKEE 207 >gi|22749179 NK6 homeobox 3 [Homo sapiens] Length = 135 Score = 74.3 bits (181), Expect = 1e-13 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 4/69 (5%) Query: 194 VWFQNRRTKWRKRHAAEMASAKKKQDSDAEKLKVGGSDA---EDDDEYNRPLDPNSDDEK 250 VWFQNRRTKWRK+ A E +S+ + A GG A +DDEYN+PLDP+SDDEK Sbjct: 55 VWFQNRRTKWRKKSALEPSSSTPRAPGGAGA-GAGGDRAPSENEDDEYNKPLDPDSDDEK 113 Query: 251 ITRLLKKHK 259 I LL+KH+ Sbjct: 114 IRLLLRKHR 122 >gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] Length = 363 Score = 73.9 bits (180), Expect = 1e-13 Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 21/129 (16%) Query: 85 LASSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVLDK 144 L SSAG GP A + PKP +L G G +GAP GV Sbjct: 219 LDSSAG---GPGALLG---PKP--KLKGS---LGTGAEEGAP----------VTAGVTAP 257 Query: 145 DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWR 204 GK + R F+ +Q+ LEK F KYL+ ER+++A++L ++E QVK+WFQNRR KW+ Sbjct: 258 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 317 Query: 205 KRHAAEMAS 213 + A ++S Sbjct: 318 RIKAGNVSS 326 >gi|23397672 homeobox D4 [Homo sapiens] Length = 255 Score = 72.0 bits (175), Expect = 5e-13 Identities = 64/211 (30%), Positives = 85/211 (40%), Gaps = 25/211 (11%) Query: 32 YALQGPAGFKAPALGGLGAQLPLGTPHGI---SDILGRPVGAAGGGLLGGLPRLNGLASS 88 Y G G + G GAQ P G+ D +P G +G G LP G Sbjct: 23 YLQGGYLGEQGADYYGGGAQGADFQPPGLYPRPDFGEQPFGGSGPGPGSALPA-RGHGQE 81 Query: 89 AGVYFGPAAAVARGYPKPLAELPGRPPIFWPGV---VQGAPWRDPR---LAGPAPAGGVL 142 G G AA P P P PP PG Q P + P L PA + Sbjct: 82 PGGPGGHYAAPGEPCPAP----PAPPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWM 137 Query: 143 DK-----------DGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQ 191 K G+ K SR ++ QQ+ LEK F +YL R +A++L ++E Q Sbjct: 138 KKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQ 197 Query: 192 VKVWFQNRRTKWRKRHAAEMASAKKKQDSDA 222 +K+WFQNRR KW+K H + S + Sbjct: 198 IKIWFQNRRMKWKKDHKLPNTKGRSSSSSSS 228 >gi|24497538 homeobox C4 [Homo sapiens] Length = 264 Score = 72.0 bits (175), Expect = 5e-13 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 146 GKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 205 G+ K SR ++ QQ+ LEK F +YL R +A+SL ++E Q+K+WFQNRR KW+K Sbjct: 154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213 Query: 206 RHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD--EKITRL 254 H + + A + + +++++ P E ITRL Sbjct: 214 DHRLPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL 264 >gi|24497540 homeobox C4 [Homo sapiens] Length = 264 Score = 72.0 bits (175), Expect = 5e-13 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 2/111 (1%) Query: 146 GKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 205 G+ K SR ++ QQ+ LEK F +YL R +A+SL ++E Q+K+WFQNRR KW+K Sbjct: 154 GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKK 213 Query: 206 RHAAEMASAKKKQDSDAEKLKVGGSDAEDDDEYNRPLDPNSDD--EKITRL 254 H + + A + + +++++ P E ITRL Sbjct: 214 DHRLPNTKVRSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL 264 >gi|153218470 BarH-like homeobox 1 [Homo sapiens] Length = 254 Score = 72.0 bits (175), Expect = 5e-13 Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 17/119 (14%) Query: 87 SSAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAGPAPAGGVLDKDG 146 SSA + GP A G P EL R + AGP G K Sbjct: 98 SSALLAAGPGLPGAAGAPHLPLELQLRGKL--------------EAAGPGEPG---TKAK 140 Query: 147 KKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 205 K + SR F+ Q+ LEK FE+ KYL+ P+R LA SLG+++ QVK W+QNRR KW+K Sbjct: 141 KGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 >gi|4885185 distal-less homeobox 3 [Homo sapiens] Length = 287 Score = 71.6 bits (174), Expect = 7e-13 Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 3/86 (3%) Query: 123 QGAPWRDPRLAGPAPAGGVLDKDGKKKH---SRPTFSGQQIFALEKTFEQTKYLAGPERA 179 Q P +DP P V +GK K R +S Q+ AL++ F++ +YLA PERA Sbjct: 101 QPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERA 160 Query: 180 RLAYSLGMTESQVKVWFQNRRTKWRK 205 LA LG+T++QVK+WFQNRR+K++K Sbjct: 161 ELAAQLGLTQTQVKIWFQNRRSKFKK 186 >gi|4758168 distal-less homeobox 2 [Homo sapiens] Length = 328 Score = 71.6 bits (174), Expect = 7e-13 Identities = 33/62 (53%), Positives = 48/62 (77%) Query: 144 KDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKW 203 K K + R +S Q+ AL++ F++T+YLA PERA LA SLG+T++QVK+WFQNRR+K+ Sbjct: 148 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKF 207 Query: 204 RK 205 +K Sbjct: 208 KK 209 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,718,985 Number of Sequences: 37866 Number of extensions: 726225 Number of successful extensions: 2738 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 287 Number of HSP's successfully gapped in prelim test: 115 Number of HSP's that attempted gapping in prelim test: 2205 Number of HSP's gapped (non-prelim): 624 length of query: 277 length of database: 18,247,518 effective HSP length: 101 effective length of query: 176 effective length of database: 14,423,052 effective search space: 2538457152 effective search space used: 2538457152 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.