SGSM2 4548

Name: SGSM2	Sequence: fasta or formatted (1051aa)		NCBI GI: 148612795
Description: RUN and TBC1 domain containing 1 isoform 1		Referenced in: Additional Interaction Domain Families Rab
Other entries for this name: alt prot [1006aa] RUN and TBC1 domain containing 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 82 3 C cysteine 2.5 26 1 D aspartate 5.6 59 3 E glutamate 7.7 81 4 F phenylalanine 3.0 32 2 G glycine 5.9 62 3 H histidine 4.5 47 2 I isoleucine 3.9 41 2 K lysine 5.0 53 2 L leucine 10.2 107 2 M methionine 2.3 24 1 N asparagine 2.4 25 2 P proline 5.5 58 2 Q glutamine 4.9 52 3 R arginine 6.1 64 3 S serine 8.2 86 5 T threonine 3.3 35 1 V valine 6.7 70 3 W tryptophan 1.5 16 1 Y tyrosine 2.9 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RUN and TBC1 domain containing 1 isoform 1 SGSM2 0.947 RUN and TBC1 domain containing 1 isoform 2 SGSM1 0.549 RUN and TBC1 domain containing 2 isoform 1 SGSM1 0.546 RUN and TBC1 domain containing 2 isoform 3 SGSM1 0.520 RUN and TBC1 domain containing 2 isoform 2 SGSM1 0.517 RUN and TBC1 domain containing 2 isoform 4 TBC1D15 0.049 TBC1 domain family, member 15 isoform 2 TBC1D15 0.049 TBC1 domain family, member 15 isoform 3 TBC1D15 0.049 TBC1 domain family, member 15 isoform 1 TBC1D17 0.042 TBC1 domain family, member 17 TBC1D16 0.042 TBC1 domain family, member 16 TBC1D25 0.040 TBC1 domain family, member 25 TBCKL 0.016 TBC domain-containing protein kinase-like TBC1D14 0.015 TBC1 domain family, member 14 isoform b TBC1D14 0.015 TBC1 domain family, member 14 isoform a TBC1D14 0.015 TBC1 domain family, member 14 isoform a TBC1D2 0.012 TBC1 domain family, member 2 TBC1D13 0.011 TBC1 domain family, member 13 TBC1D12 0.010 TBC1 domain family, member 12 TBC1D2B 0.009 TBC1 domain family, member 2B isoform a TBC1D2B 0.009 TBC1 domain family, member 2B isoform b TBC1D22A 0.007 TBC1 domain family, member 22A TBC1D4 0.007 TBC1 domain family, member 4 RUNDC2A 0.007 RUN domain containing 2A GRTP1 0.007 growth hormone regulated TBC protein 1 USP6NL 0.006 USP6 N-terminal like isoform 1 USP6NL 0.006 USP6 N-terminal like isoform 2 RUFY1 0.006 RUN and FYVE domain-containing 1 isoform b RUFY1 0.006 RUN and FYVE domain-containing 1 isoform b RUFY1 0.006 RUN and FYVE domain-containing 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.