Guide to the Human Genome
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Name: ILDR1 Sequence: fasta or formatted (502aa) NCBI GI: 28557777
Description:

immunoglobulin-like domain containing receptor 1

Referenced in:

Lipoproteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         18           2
 C cysteine            4.2         21           3
 D aspartate           5.4         27           1
 E glutamate           5.4         27           2
 F phenylalanine       1.6          8           1
 G glycine             4.6         23           1
 H histidine           4.0         20           3
 I isoleucine          4.4         22           2
 K lysine              3.2         16           2
 L leucine            10.2         51           6
 M methionine          1.0          5           1
 N asparagine          2.4         12           1
 P proline             9.4         47           2
 Q glutamine           4.8         24           2
 R arginine           10.0         50           4
 S serine             11.6         58           3
 T threonine           3.6         18           2
 V valine              4.8         24           3
 W tryptophan          3.4         17           2
 Y tyrosine            2.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin-like domain containing receptor 1 [Ho... 
LSR                   0.174   LISCH protein isoform 1 
LSR                   0.163   LISCH protein isoform 2 
ILDR2                 0.156   immunoglobulin-like domain containing receptor 2 [Ho...
LSR                   0.083   LISCH protein isoform 3 
C2orf16               0.030   hypothetical protein LOC84226 
LOC100170229          0.021   hypothetical protein LOC100170229 
SCAF1                 0.019   SR-related CTD-associated factor 1 
NKTR                  0.019   natural killer-tumor recognition sequence 
SRRM2                 0.018   splicing coactivator subunit SRm300 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
PRPF38A               0.016   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
SFRS2IP               0.016   splicing factor, arginine/serine-rich 2, interactin...
KIAA1853              0.016   KIAA1853 protein 
PPIG                  0.015   peptidylprolyl isomerase G 
FLJ37078              0.014   hypothetical protein LOC222183 
SFRS8                 0.013   splicing factor, arginine/serine-rich 8 
CACNA1A               0.013   calcium channel, alpha 1A subunit isoform 4 
RNASEN                0.013   ribonuclease III, nuclear isoform 2 
CHERP                 0.013   calcium homeostasis endoplasmic reticulum protein [...
MYST2                 0.012   MYST histone acetyltransferase 2 
SON                   0.012   SON DNA-binding protein isoform F 
SON                   0.012   SON DNA-binding protein isoform B 
SNRNP27               0.012   small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho...
CRTC2                 0.012   CREB regulated transcription coactivator 2 
SLTM                  0.011   modulator of estrogen induced transcription isoform ...
SLTM                  0.011   modulator of estrogen induced transcription isoform ...
SFRS12                0.011   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.011   splicing factor, arginine/serine-rich 12 isoform b [...
PBXIP1                0.011   pre-B-cell leukemia homeobox interacting protein 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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