LSR 29812

Name: LSR	Sequence: fasta or formatted (630aa)		NCBI GI: 45505163
Description: LISCH protein isoform 1		Referenced in: Lipoproteins
Other entries for this name: alt prot [649aa] LISCH protein isoform 2 alt prot [581aa] LISCH protein isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 59 3 C cysteine 3.2 20 3 D aspartate 6.8 43 2 E glutamate 4.4 28 5 F phenylalanine 1.9 12 1 G glycine 7.8 49 3 H histidine 1.9 12 3 I isoleucine 2.2 14 1 K lysine 2.1 13 2 L leucine 6.7 42 3 M methionine 1.4 9 1 N asparagine 2.4 15 2 P proline 9.4 59 4 Q glutamine 3.8 24 2 R arginine 10.2 64 3 S serine 9.2 58 3 T threonine 4.6 29 1 V valine 6.2 39 4 W tryptophan 1.9 12 1 Y tyrosine 4.6 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LISCH protein isoform 1 LSR 0.991 LISCH protein isoform 2 LSR 0.887 LISCH protein isoform 3 ILDR2 0.229 immunoglobulin-like domain containing receptor 2 [Ho... ILDR1 0.140 immunoglobulin-like domain containing receptor 1 [Ho... LOC100170229 0.026 hypothetical protein LOC100170229 TACC2 0.022 transforming, acidic coiled-coil containing protein... GPA33 0.019 transmembrane glycoprotein A33 precursor SRRM2 0.019 splicing coactivator subunit SRm300 C2orf16 0.019 hypothetical protein LOC84226 EIF3A 0.018 eukaryotic translation initiation factor 3, subunit 1... SNRNP70 0.017 U1 small nuclear ribonucleoprotein 70 kDa MARVELD3 0.017 MARVEL domain containing 3 isoform 1 MARVELD3 0.017 MARVEL domain containing 3 isoform 2 KIAA1853 0.014 KIAA1853 protein DIDO1 0.014 death inducer-obliterator 1 isoform c RIMS2 0.014 regulating synaptic membrane exocytosis 2 isoform b... ZC3H18 0.014 zinc finger CCCH-type containing 18 RDBP 0.013 RD RNA-binding protein RSRC2 0.013 arginine/serine-rich coiled-coil 2 isoform a SFRS6 0.013 arginine/serine-rich splicing factor 6 C9orf86 0.013 Rab-like GTP-binding protein 1 isoform 1 EIF4B 0.012 eukaryotic translation initiation factor 4B RIMS2 0.012 regulating synaptic membrane exocytosis 2 isoform a... SFRS12 0.012 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.012 splicing factor, arginine/serine-rich 12 isoform b [... TJP2 0.012 tight junction protein 2 (zona occludens 2) isoform ... TJP2 0.012 tight junction protein 2 (zona occludens 2) isoform ... RSRC2 0.012 arginine/serine-rich coiled-coil 2 isoform b SFRS2 0.011 splicing factor, arginine/serine-rich 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.