LSR 30038

Name: LSR	Sequence: fasta or formatted (581aa)		NCBI GI: 45593136
Description: LISCH protein isoform 3		Referenced in: Lipoproteins
Other entries for this name: alt prot [630aa] LISCH protein isoform 1 alt prot [649aa] LISCH protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 56 3 C cysteine 1.0 6 1 D aspartate 7.1 41 2 E glutamate 4.6 27 5 F phenylalanine 1.5 9 1 G glycine 8.3 48 3 H histidine 1.9 11 3 I isoleucine 2.1 12 1 K lysine 2.1 12 2 L leucine 6.0 35 3 M methionine 1.5 9 1 N asparagine 2.6 15 2 P proline 9.5 55 4 Q glutamine 4.0 23 2 R arginine 10.8 63 3 S serine 10.0 58 3 T threonine 4.8 28 1 V valine 6.0 35 2 W tryptophan 1.7 10 1 Y tyrosine 4.8 28 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LISCH protein isoform 3 LSR 0.980 LISCH protein isoform 1 LSR 0.582 LISCH protein isoform 2 ILDR2 0.152 immunoglobulin-like domain containing receptor 2 [Ho... ILDR1 0.074 immunoglobulin-like domain containing receptor 1 [Ho... LOC100170229 0.029 hypothetical protein LOC100170229 TACC2 0.025 transforming, acidic coiled-coil containing protein... GPA33 0.022 transmembrane glycoprotein A33 precursor SRRM2 0.020 splicing coactivator subunit SRm300 C2orf16 0.020 hypothetical protein LOC84226 EIF3A 0.020 eukaryotic translation initiation factor 3, subunit 1... SNRNP70 0.019 U1 small nuclear ribonucleoprotein 70 kDa MARVELD3 0.019 MARVEL domain containing 3 isoform 1 MARVELD3 0.019 MARVEL domain containing 3 isoform 2 KIAA1853 0.015 KIAA1853 protein DIDO1 0.015 death inducer-obliterator 1 isoform c RIMS2 0.015 regulating synaptic membrane exocytosis 2 isoform b... ZC3H18 0.015 zinc finger CCCH-type containing 18 RDBP 0.014 RD RNA-binding protein RSRC2 0.014 arginine/serine-rich coiled-coil 2 isoform a SFRS6 0.014 arginine/serine-rich splicing factor 6 EIF4B 0.014 eukaryotic translation initiation factor 4B RIMS2 0.014 regulating synaptic membrane exocytosis 2 isoform a... SFRS12 0.014 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.014 splicing factor, arginine/serine-rich 12 isoform b [... C9orf86 0.013 Rab-like GTP-binding protein 1 isoform 1 TJP2 0.013 tight junction protein 2 (zona occludens 2) isoform ... TJP2 0.013 tight junction protein 2 (zona occludens 2) isoform ... VSIG1 0.013 V-set and immunoglobulin domain containing 1 RSRC2 0.013 arginine/serine-rich coiled-coil 2 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.