Search of human proteins with 28178857

Search of human proteins with 28178857

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28178857 TG-interacting factor isoform d [Homo sapiens]
         (252 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28178843 TG-interacting factor isoform a [Homo sapiens]            511   e-145
gi|4507473 TG-interacting factor isoform c [Homo sapiens]             511   e-145
gi|28178855 TG-interacting factor isoform d [Homo sapiens]            511   e-145
gi|28178853 TG-interacting factor isoform d [Homo sapiens]            511   e-145
gi|28178851 TG-interacting factor isoform d [Homo sapiens]            511   e-145
gi|28178857 TG-interacting factor isoform d [Homo sapiens]            511   e-145
gi|28178849 TG-interacting factor isoform c [Homo sapiens]            511   e-145
gi|28178845 TG-interacting factor isoform b [Homo sapiens]            511   e-145
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]             196   1e-50
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ...   128   4e-30
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ...   113   2e-25
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]                   80   2e-15
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]                    75   7e-14
gi|4505151 Meis homeobox 1 [Homo sapiens]                              74   2e-13
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho...    74   2e-13
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]                   73   2e-13
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]                   73   2e-13
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]                   73   2e-13
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]                   73   2e-13
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]                   72   4e-13
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]                   72   4e-13
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]                   72   4e-13
gi|7705555 iroquois homeobox 4 [Homo sapiens]                          61   8e-10
gi|178057337 mohawk homeobox [Homo sapiens]                            60   1e-09
gi|42544241 iroquois homeobox protein 6 [Homo sapiens]                 59   5e-09
gi|226371735 iroquois homeobox 3 [Homo sapiens]                        57   1e-08
gi|51479177 iroquois homeobox protein 1 [Homo sapiens]                 57   2e-08
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]              55   6e-08
gi|139394646 iroquois homeobox protein 5 [Homo sapiens]                55   8e-08
gi|197100900 iroquois homeobox 2 [Homo sapiens]                        55   8e-08

>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
          Length = 401

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 150 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 209

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 210 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 269

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 270 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 329

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 330 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 389

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 390 AAEMELQAKLTA 401


>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 21  MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 81  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 261 AAEMELQAKLTA 272


>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252


>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252


>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252


>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
          Length = 252

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252


>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
          Length = 272

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 21  MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 81  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 261 AAEMELQAKLTA 272


>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
          Length = 286

 Score =  511 bits (1315), Expect = e-145
 Identities = 252/252 (100%), Positives = 252/252 (100%)

Query: 1   MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
           MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 35  MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 94

Query: 61  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
           QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 95  QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 154

Query: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
           FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 155 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 214

Query: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
           QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 215 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 274

Query: 241 AAEMELQAKLTA 252
           AAEMELQAKLTA
Sbjct: 275 AAEMELQAKLTA 286


>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
          Length = 237

 Score =  196 bits (499), Expect = 1e-50
 Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)

Query: 13  SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 72
           +GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK  LS QT+LS LQ+CNWFINARRR
Sbjct: 16  AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75

Query: 73  LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 132
           LLPDMLRKDGKDPNQFTISRRG K S+                       +   G +P++
Sbjct: 76  LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113

Query: 133 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 192
                P P++  S L+  S+  H+        PF        G+    + +     T T 
Sbjct: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166

Query: 193 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 247
           L   E    +G       GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215


>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
           sapiens]
          Length = 241

 Score =  128 bits (322), Expect = 4e-30
 Identities = 85/235 (36%), Positives = 120/235 (51%), Gaps = 48/235 (20%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS LQ+ NWFINARRR+L
Sbjct: 50  KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRIL 109

Query: 75  PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR 134
           PDML++   DP    I  +  K +  + ++S              P  S  +GP+     
Sbjct: 110 PDMLQQRRNDP---IIGHKTGKDAHATHLQSTEA---------SVPAKSGPSGPDNVQSL 157

Query: 135 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM 194
           PL P P    S   +P                   +S    + T I Q   K     S+ 
Sbjct: 158 PLWPLPKGQMSREKQPDP-----------------ESAPSQKLTGIAQ--PKKKVKVSVT 198

Query: 195 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAK 249
            P                 ++P    P+ + DFS F LLVD A++RAAE+EL+ K
Sbjct: 199 SP-----------------SSPELVSPEEHADFSSFLLLVDAAVQRAAELELEKK 236


>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
           sapiens]
          Length = 185

 Score =  113 bits (282), Expect = 2e-25
 Identities = 54/114 (47%), Positives = 81/114 (71%), Gaps = 2/114 (1%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS L++ NWFINARRR+L
Sbjct: 50  KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRIL 109

Query: 75  PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGP 128
           PDML++   DP     + + A  +   S E+ +  K+    + +T + +C  GP
Sbjct: 110 PDMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKS--GPVVQTMYKACPCGP 161


>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
          Length = 472

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 3   IPLDLSS---SAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLST 59
           + LDL+S   +     + +RG LPK +  I+R WL++H  + YP+E EK  ++ QT+L+ 
Sbjct: 273 VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTL 332

Query: 60  LQVCNWFINARRRLLPDMLRKDGKDP 85
           LQV NWFINARRR+L  ML     DP
Sbjct: 333 LQVNNWFINARRRILQPMLDASNPDP 358


>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
          Length = 436

 Score = 74.7 bits (182), Expect = 7e-14
 Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 7   LSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWF 66
           L    GS K +R G LPK +  ++R WL++H  + YP+E EK  ++ QT+L+ LQV NWF
Sbjct: 252 LHQDDGSSKNKR-GVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWF 310

Query: 67  INARRRLLPDML 78
           INARRR+L  ML
Sbjct: 311 INARRRILQPML 322


>gi|4505151 Meis homeobox 1 [Homo sapiens]
          Length = 390

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 33/75 (44%), Positives = 51/75 (68%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           + ++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 331

Query: 75  PDMLRKDGKDPNQFT 89
             M+ +  +  +Q T
Sbjct: 332 QPMIDQSNRAVSQGT 346


>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 2 [Homo sapiens]
          Length = 358

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 34/96 (35%), Positives = 56/96 (58%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           + ++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 245 RNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 304

Query: 75  PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 110
             M+ +  +       S  G  I   +  +  + ++
Sbjct: 305 QPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 340


>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
          Length = 306

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 188 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 247

Query: 75  PDMLRKDGKDPNQ 87
             M+ +  +  +Q
Sbjct: 248 QPMIDQSNRAVSQ 260


>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
          Length = 470

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 335

Query: 75  PDMLRKDGKDPNQ 87
             M+ +  +  +Q
Sbjct: 336 QPMIDQSNRAVSQ 348


>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
          Length = 394

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 335

Query: 75  PDMLRKDGKDPNQ 87
             M+ +  +  +Q
Sbjct: 336 QPMIDQSNRAVSQ 348


>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
          Length = 381

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 32/73 (43%), Positives = 51/73 (69%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 263 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 322

Query: 75  PDMLRKDGKDPNQ 87
             M+ +  +  +Q
Sbjct: 323 QPMIDQSNRAVSQ 335


>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
          Length = 388

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 31/69 (44%), Positives = 49/69 (71%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 263 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 322

Query: 75  PDMLRKDGK 83
             M+ +  +
Sbjct: 323 QPMIDQSNR 331


>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
          Length = 401

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 31/69 (44%), Positives = 49/69 (71%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 335

Query: 75  PDMLRKDGK 83
             M+ +  +
Sbjct: 336 QPMIDQSNR 344


>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
          Length = 477

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 31/69 (44%), Positives = 49/69 (71%)

Query: 15  KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 74
           ++++RG  PK +  I+R WL++H  + YPSE++K  L+Q T L+ LQV NWFINARRR++
Sbjct: 276 RQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 335

Query: 75  PDMLRKDGK 83
             M+ +  +
Sbjct: 336 QPMIDQSNR 344


>gi|7705555 iroquois homeobox 4 [Homo sapiens]
          Length = 519

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 4   PLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVC 63
           P D   +  SG RR+  N  +E+   L+ WL EHR N YP++ EK +L+  T ++  QV 
Sbjct: 133 PYDRYGTMDSGTRRK--NATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVS 190

Query: 64  NWFINARRRL 73
            WF NARRRL
Sbjct: 191 TWFANARRRL 200


>gi|178057337 mohawk homeobox [Homo sapiens]
          Length = 352

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 27/60 (45%), Positives = 40/60 (66%)

Query: 14  GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
           GK R +    ++  + L+ WLY+HR N YP++ EK LL+  + ++ +QV NWF NARRRL
Sbjct: 69  GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128


>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
          Length = 446

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 11  AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 70
           +G+G+R+   N  +E+   L+ WL EHR N YP++ EK +L+  T ++  QV  WF NAR
Sbjct: 145 SGAGRRK---NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 201

Query: 71  RRL 73
           RRL
Sbjct: 202 RRL 204


>gi|226371735 iroquois homeobox 3 [Homo sapiens]
          Length = 501

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query: 14  GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
           G   R  N  +ES   L+ WL EHR N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 126 GDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185


>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
          Length = 480

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query: 14  GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
           G   R  N  +ES   L+ WL EHR N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 126 GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185


>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
          Length = 374

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 16  RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 75
           RR+R N  K++ ++L ++ Y H  N YPSE+ K  L+++  L+  QV NWF N R R   
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270

Query: 76  DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 130
           +M    GK   + TI      +  T      +G+     +   TP  S ++GP P
Sbjct: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315


>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
          Length = 483

 Score = 54.7 bits (130), Expect = 8e-08
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 19  RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
           R N  +++   L+ WL EHR N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 117 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 171


>gi|197100900 iroquois homeobox 2 [Homo sapiens]
          Length = 471

 Score = 54.7 bits (130), Expect = 8e-08
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 19  RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
           R N  +++   L+ WL EHR N YP++ EK +L+  T ++  QV  WF NARRRL
Sbjct: 118 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,155,740
Number of Sequences: 37866
Number of extensions: 552750
Number of successful extensions: 2788
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2641
Number of HSP's gapped (non-prelim): 202
length of query: 252
length of database: 18,247,518
effective HSP length: 100
effective length of query: 152
effective length of database: 14,460,918
effective search space: 2198059536
effective search space used: 2198059536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.