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Search of human proteins with 28178849
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28178849 TG-interacting factor isoform c [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 548 e-156
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 548 e-156
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 540 e-154
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 539 e-154
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 196 1e-50
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 128 5e-30
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 113 2e-25
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 80 2e-15
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 80 2e-15
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 77 2e-14
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 75 8e-14
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 75 8e-14
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 75 8e-14
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 75 8e-14
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 74 1e-13
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 74 1e-13
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 74 1e-13
gi|4505151 Meis homeobox 1 [Homo sapiens] 74 2e-13
gi|7705555 iroquois homeobox 4 [Homo sapiens] 61 9e-10
gi|178057337 mohawk homeobox [Homo sapiens] 60 2e-09
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 59 6e-09
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 59 6e-09
gi|226371735 iroquois homeobox 3 [Homo sapiens] 57 1e-08
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 57 2e-08
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 55 7e-08
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 55 9e-08
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 548 bits (1413), Expect = e-156
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
Sbjct: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
Query: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET
Sbjct: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
Query: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA
Sbjct: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
Query: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP
Sbjct: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
Query: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 548 bits (1413), Expect = e-156
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
Sbjct: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
Query: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET
Sbjct: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
Query: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA
Sbjct: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
Query: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP
Sbjct: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
Query: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 540 bits (1392), Expect = e-154
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 5 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 64
KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS
Sbjct: 134 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 193
Query: 65 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 124
EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE
Sbjct: 194 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 253
Query: 125 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 184
SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV
Sbjct: 254 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 313
Query: 185 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 244
PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN
Sbjct: 314 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 373
Query: 245 QDFSGFQLLVDVALKRAAEMELQAKLTA 272
QDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 374 QDFSGFQLLVDVALKRAAEMELQAKLTA 401
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 539 bits (1389), Expect = e-154
Identities = 267/272 (98%), Positives = 269/272 (98%)
Query: 1 MKGKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 60
+ +GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
Sbjct: 15 LTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN 74
Query: 61 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 120
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET
Sbjct: 75 AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISET 134
Query: 121 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 180
SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA
Sbjct: 135 SSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTA 194
Query: 181 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 240
LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP
Sbjct: 195 LKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTP 254
Query: 241 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 272
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 255 PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 21 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 81 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 261 AAEMELQAKLTA 272
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 21 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 81 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 261 AAEMELQAKLTA 272
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 21 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 81 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 261 AAEMELQAKLTA 272
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 21 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 80
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 81 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 140
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 141 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 200
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 201 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 260
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 261 AAEMELQAKLTA 272
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 196 bits (499), Expect = 1e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 33 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 92
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
Query: 93 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 152
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
Query: 153 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 212
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
Query: 213 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 267
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 128 bits (322), Expect = 5e-30
Identities = 85/235 (36%), Positives = 120/235 (51%), Gaps = 48/235 (20%)
Query: 35 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 94
K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS LQ+ NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRIL 109
Query: 95 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGR 154
PDML++ DP I + K + + ++S P S +GP+
Sbjct: 110 PDMLQQRRNDP---IIGHKTGKDAHATHLQSTEA---------SVPAKSGPSGPDNVQSL 157
Query: 155 PLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLM 214
PL P P S +P +S + T I Q K S+
Sbjct: 158 PLWPLPKGQMSREKQPDP-----------------ESAPSQKLTGIAQ--PKKKVKVSVT 198
Query: 215 YPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAK 269
P ++P P+ + DFS F LLVD A++RAAE+EL+ K
Sbjct: 199 SP-----------------SSPELVSPEEHADFSSFLLLVDAAVQRAAELELEKK 236
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 113 bits (282), Expect = 2e-25
Identities = 54/114 (47%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
Query: 35 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 94
K++R+GNLP ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS L++ NWFINARRR+L
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRIL 109
Query: 95 PDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGP 148
PDML++ DP + + A + S E+ + K+ + +T + +C GP
Sbjct: 110 PDMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKS--GPVVQTMYKACPCGP 161
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 80.1 bits (196), Expect = 2e-15
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 6 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 56
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 207 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 266
Query: 57 HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAK 116
H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S G
Sbjct: 267 HLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQP 326
Query: 117 ISETSSVESVMGIK 130
I + + + ++
Sbjct: 327 IGGYTETQPHVAVR 340
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 80.1 bits (196), Expect = 2e-15
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 23 IPLDLSS---SAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLST 79
+ LDL+S + + +RG LPK + I+R WL++H + YP+E EK ++ QT+L+
Sbjct: 273 VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTL 332
Query: 80 LQVCNWFINARRRLLPDMLRKDGKDP 105
LQV NWFINARRR+L ML DP
Sbjct: 333 LQVNNWFINARRRILQPMLDASNPDP 358
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 6 GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSE 65
G + S+ + + + D+ + L GS K +R G LPK + ++R WL++H + YP+E
Sbjct: 232 GTIRIQNSQLQLQLNQDLSI-LHQDDGSSKNKR-GVLPKHATNVMRSWLFQHIGHPYPTE 289
Query: 66 QEKALLSQQTHLSTLQVCNWFINARRRLLPDML 98
EK ++ QT+L+ LQV NWFINARRR+L ML
Sbjct: 290 DEKKQIAAQTNLTLLQVNNWFINARRRILQPML 322
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 74.7 bits (182), Expect = 8e-14
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 166 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 215
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 216 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 74.7 bits (182), Expect = 8e-14
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 254 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 303
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 304 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 74.7 bits (182), Expect = 8e-14
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 254 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 303
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 304 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 74.7 bits (182), Expect = 8e-14
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 241 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 290
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 107
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 291 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 335
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 241 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 290
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 103
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 291 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 331
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 254 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 303
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 103
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 304 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 73.9 bits (180), Expect = 1e-13
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 3 GKKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAY 62
G VA+ G+ +D+ D ++++RG PK + I+R WL++H + Y
Sbjct: 254 GLDNSVASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPY 303
Query: 63 PSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 103
PSE++K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 304 PSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 73.6 bits (179), Expect = 2e-13
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 35 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 94
+ ++RG PK + I+R WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++
Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 331
Query: 95 PDMLRKDGKDPNQFT 109
M+ + + +Q T
Sbjct: 332 QPMIDQSNRAVSQGT 346
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 61.2 bits (147), Expect = 9e-10
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 24 PLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVC 83
P D + SG RR+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV
Sbjct: 133 PYDRYGTMDSGTRRK--NATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVS 190
Query: 84 NWFINARRRL 93
WF NARRRL
Sbjct: 191 TWFANARRRL 200
>gi|178057337 mohawk homeobox [Homo sapiens]
Length = 352
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 34 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 58.5 bits (140), Expect = 6e-09
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 55/180 (30%)
Query: 6 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 56
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 224 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 283
Query: 57 HR----------------------------------------------YNAYPSEQEKAL 70
H + YPSE++K
Sbjct: 284 HLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQ 343
Query: 71 LSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 130
L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + + ++
Sbjct: 344 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 403
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 58.5 bits (140), Expect = 6e-09
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 31 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 90
+G+G+R+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV WF NAR
Sbjct: 145 SGAGRRK---NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 201
Query: 91 RRL 93
RRL
Sbjct: 202 RRL 204
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 57.4 bits (137), Expect = 1e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 34 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 34 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 55.1 bits (131), Expect = 7e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 95
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
Query: 96 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 150
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 54.7 bits (130), Expect = 9e-08
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 39 RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
R N +++ L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 117 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,904,659
Number of Sequences: 37866
Number of extensions: 594789
Number of successful extensions: 2349
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 2215
Number of HSP's gapped (non-prelim): 198
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.