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Search of human proteins with 28178843
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28178843 TG-interacting factor isoform a [Homo sapiens]
(401 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 820 0.0
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 541 e-154
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 540 e-154
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 540 e-154
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 511 e-145
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 196 2e-50
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 129 5e-30
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 114 2e-25
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 80 3e-15
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 80 3e-15
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 77 4e-14
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 74 2e-13
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 74 2e-13
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 74 2e-13
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 74 2e-13
gi|4505151 Meis homeobox 1 [Homo sapiens] 74 3e-13
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 74 3e-13
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 74 3e-13
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 74 3e-13
gi|7705555 iroquois homeobox 4 [Homo sapiens] 61 2e-09
gi|178057337 mohawk homeobox [Homo sapiens] 60 3e-09
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 59 1e-08
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 59 1e-08
gi|226371735 iroquois homeobox 3 [Homo sapiens] 57 2e-08
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 57 3e-08
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 55 1e-07
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 55 1e-07
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 820 bits (2118), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL 60
MVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL
Sbjct: 1 MVLAQSRVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYL 60
Query: 61 PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA 120
PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA
Sbjct: 61 PPAPWSSLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAGPRRPHRWELPRSPSQGA 120
Query: 121 QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR 180
QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR
Sbjct: 121 QGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILR 180
Query: 181 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS 240
DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS
Sbjct: 181 DWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTIS 240
Query: 241 RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS 300
RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS
Sbjct: 241 RRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPS 300
Query: 301 VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG 360
VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG
Sbjct: 301 VICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSG 360
Query: 361 LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 401
LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 361 LFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 401
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 541 bits (1393), Expect = e-154
Identities = 269/275 (97%), Positives = 271/275 (98%)
Query: 127 RRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH 186
R L + +GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH
Sbjct: 12 RSSLTSSQGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEH 71
Query: 187 RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI 246
RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI
Sbjct: 72 RYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKI 131
Query: 247 SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT 306
SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT
Sbjct: 132 SETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTT 191
Query: 307 VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP 366
VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP
Sbjct: 192 VTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPP 251
Query: 367 PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 401
PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 252 PTPPDLNQDFSGFQLLVDVALKRAAEMELQAKLTA 286
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 540 bits (1392), Expect = e-154
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 134 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 193
KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS
Sbjct: 5 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 64
Query: 194 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 253
EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE
Sbjct: 65 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 124
Query: 254 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 313
SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV
Sbjct: 125 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 184
Query: 314 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 373
PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN
Sbjct: 185 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 244
Query: 374 QDFSGFQLLVDVALKRAAEMELQAKLTA 401
QDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 245 QDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 540 bits (1392), Expect = e-154
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 134 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 193
KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS
Sbjct: 5 KGIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPS 64
Query: 194 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 253
EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE
Sbjct: 65 EQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVE 124
Query: 254 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 313
SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV
Sbjct: 125 SVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDV 184
Query: 314 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 373
PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN
Sbjct: 185 PFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN 244
Query: 374 QDFSGFQLLVDVALKRAAEMELQAKLTA 401
QDFSGFQLLVDVALKRAAEMELQAKLTA
Sbjct: 245 QDFSGFQLLVDVALKRAAEMELQAKLTA 272
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 150 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 209
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 210 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 269
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 270 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 329
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 330 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 389
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 390 AAEMELQAKLTA 401
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 150 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 209
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 210 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 269
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 270 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 329
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 330 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 389
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 390 AAEMELQAKLTA 401
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 150 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 209
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 210 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 269
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 270 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 329
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 330 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 389
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 390 AAEMELQAKLTA 401
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 511 bits (1315), Expect = e-145
Identities = 252/252 (100%), Positives = 252/252 (100%)
Query: 150 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 209
MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL
Sbjct: 1 MDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTL 60
Query: 210 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 269
QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP
Sbjct: 61 QVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETP 120
Query: 270 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 329
FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI
Sbjct: 121 FHSCTAGPNPTLGRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDI 180
Query: 330 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 389
QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR
Sbjct: 181 QQIAAKNFTDTSLMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKR 240
Query: 390 AAEMELQAKLTA 401
AAEMELQAKLTA
Sbjct: 241 AAEMELQAKLTA 252
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 196 bits (499), Expect = 2e-50
Identities = 120/236 (50%), Positives = 144/236 (61%), Gaps = 37/236 (15%)
Query: 162 SGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRR 221
+GKR+RRGNLPKESV+ILRDWLY HRYNAYPSEQEK LS QT+LS LQ+CNWFINARRR
Sbjct: 16 AGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRR 75
Query: 222 LLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTL 281
LLPDMLRKDGKDPNQFTISRRG K S+ + G +P++
Sbjct: 76 LLPDMLRKDGKDPNQFTISRRGGKASDV----------------------ALPRGSSPSV 113
Query: 282 GRPLSPKPSSPGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTS 341
P P++ S L+ S+ H+ PF G+ + + T T
Sbjct: 114 LAVSVPAPTNVLS-LSVCSMPLHSGQGEKPAAPFPR------GELESPKPLVTPGSTLTL 166
Query: 342 LMYPEDTCKSGPSTNTQSGLFNTPPPTPPDLN-QDFSGFQLLVDVALKRAAEMELQ 396
L E +G GLFNTPPPTPP+ + +DFS FQLLV+VAL+RAAEMELQ
Sbjct: 167 LTRAEAGSPTG-------GLFNTPPPTPPEQDKEDFSSFQLLVEVALQRAAEMELQ 215
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 129 bits (324), Expect = 5e-30
Identities = 96/287 (33%), Positives = 140/287 (48%), Gaps = 63/287 (21%)
Query: 120 AQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG--------KRRRRGNL 171
A GPA ET + S ++T+ + D + ++A +G K++R+GNL
Sbjct: 5 ADGPA------ETQSPVEKDSPAKTQSP-AQDTSIMSRNNADTGRVLALPEHKKKRKGNL 57
Query: 172 PKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDG 231
P ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS LQ+ NWFINARRR+LPDML++
Sbjct: 58 PAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILPDMLQQRR 117
Query: 232 KDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNPTLGRPLSPKPSS 291
DP I + K + + ++S P S +GP+ PL P P
Sbjct: 118 NDP---IIGHKTGKDAHATHLQSTEA---------SVPAKSGPSGPDNVQSLPLWPLPKG 165
Query: 292 PGSVLARPSVICHTTVTALKDVPFSLCQSVGVGQNTDIQQIAAKNFTDTSLMYPEDTCKS 351
S +P +S + T I Q K S+ P
Sbjct: 166 QMSREKQPDP-----------------ESAPSQKLTGIAQ--PKKKVKVSVTSP------ 200
Query: 352 GPSTNTQSGLFNTPPPTPPDLNQDFSGFQLLVDVALKRAAEMELQAK 398
++P P+ + DFS F LLVD A++RAAE+EL+ K
Sbjct: 201 -----------SSPELVSPEEHADFSSFLLLVDAAVQRAAELELEKK 236
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 114 bits (284), Expect = 2e-25
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 17/166 (10%)
Query: 120 AQGPAPRRRLLETMKGIVAASGSETEDEDSMDIPLDLSSSAGSG--------KRRRRGNL 171
A GPA ET + S ++T+ + D + ++A +G K++R+GNL
Sbjct: 5 ADGPA------ETQSPVEKDSPAKTQSP-AQDTSIMSRNNADTGRVLALPEHKKKRKGNL 57
Query: 172 PKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDG 231
P ESV+ILRDW+Y+HR+ AYPSE+EK +LS++T+LS L++ NWFINARRR+LPDML++
Sbjct: 58 PAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILPDMLQQRR 117
Query: 232 KDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGP 277
DP + + A + S E+ + K+ + +T + +C GP
Sbjct: 118 NDPIIGHKTGKDAHATHLQSTEASVPAKS--GPVVQTMYKACPCGP 161
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 80.1 bits (196), Expect = 3e-15
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 135 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 185
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 207 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 266
Query: 186 HRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAK 245
H + YPSE++K L+Q T L+ LQV NWFINARRR++ M+ + + S G
Sbjct: 267 HLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQP 326
Query: 246 ISETSSVESVMGIK 259
I + + + ++
Sbjct: 327 IGGYTETQPHVAVR 340
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 80.1 bits (196), Expect = 3e-15
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 152 IPLDLSS---SAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLST 208
+ LDL+S + + +RG LPK + I+R WL++H + YP+E EK ++ QT+L+
Sbjct: 273 VNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTL 332
Query: 209 LQVCNWFINARRRLLPDMLRKDGKDP 234
LQV NWFINARRR+L ML DP
Sbjct: 333 LQVNNWFINARRRILQPMLDASNPDP 358
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 76.6 bits (187), Expect = 4e-14
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 135 GIVAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSE 194
G + S+ + + + D+ + L GS K +R G LPK + ++R WL++H + YP+E
Sbjct: 232 GTIRIQNSQLQLQLNQDLSI-LHQDDGSSKNKR-GVLPKHATNVMRSWLFQHIGHPYPTE 289
Query: 195 QEKALLSQQTHLSTLQVCNWFINARRRLLPDML 227
EK ++ QT+L+ LQV NWFINARRR+L ML
Sbjct: 290 DEKKQIAAQTNLTLLQVNNWFINARRRILQPML 322
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 171 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 220
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 236
K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 221 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 260
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 259 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 308
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 236
K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 309 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 259 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 308
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 236
K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 309 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 348
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 74.3 bits (181), Expect = 2e-13
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 10/100 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 246 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 295
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQ 236
K L+Q T L+ LQV NWFINARRR++ M+ + + +Q
Sbjct: 296 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQ 335
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 73.6 bits (179), Expect = 3e-13
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 164 KRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLL 223
+ ++RG PK + I+R WL++H + YPSE++K L+Q T L+ LQV NWFINARRR++
Sbjct: 272 RHKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIV 331
Query: 224 PDMLRKDGKDPNQFT 238
M+ + + +Q T
Sbjct: 332 QPMIDQSNRAVSQGT 346
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 73.6 bits (179), Expect = 3e-13
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 246 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 295
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 232
K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 296 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 331
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 73.6 bits (179), Expect = 3e-13
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 259 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 308
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 232
K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 309 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 73.6 bits (179), Expect = 3e-13
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 137 VAASGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQE 196
VA+ G+ +D+ D ++++RG PK + I+R WL++H + YPSE++
Sbjct: 259 VASPGTGDDDDPDKD----------KKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQ 308
Query: 197 KALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGK 232
K L+Q T L+ LQV NWFINARRR++ M+ + +
Sbjct: 309 KKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR 344
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 61.2 bits (147), Expect = 2e-09
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 153 PLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVC 212
P D + SG RR+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV
Sbjct: 133 PYDRYGTMDSGTRRK--NATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVS 190
Query: 213 NWFINARRRL 222
WF NARRRL
Sbjct: 191 TWFANARRRL 200
>gi|178057337 mohawk homeobox [Homo sapiens]
Length = 352
Score = 60.5 bits (145), Expect = 3e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 163 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 222
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 1 [Homo sapiens]
Length = 421
Score = 58.5 bits (140), Expect = 1e-08
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 55/180 (30%)
Query: 135 GIVAASGSETEDE-DSMDIPLDLSSSAGSG--------KRRRRGNLPKESVQILRDWLYE 185
G+ + SG + D+ D +D + SS G + ++RG PK + I+R WL++
Sbjct: 224 GLASQSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQ 283
Query: 186 HR----------------------------------------------YNAYPSEQEKAL 199
H + YPSE++K
Sbjct: 284 HLSRRSEAPVLPDVCLGLGSPSPGPRWARPWGSDCGRPGRQSDSCWWLQHPYPSEEQKKQ 343
Query: 200 LSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISETSSVESVMGIK 259
L+Q T L+ LQV NWFINARRR++ M+ + + S G I + + + ++
Sbjct: 344 LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVR 403
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 58.5 bits (140), Expect = 1e-08
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 160 AGSGKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINAR 219
+G+G+R+ N +E+ L+ WL EHR N YP++ EK +L+ T ++ QV WF NAR
Sbjct: 145 SGAGRRK---NATRETTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANAR 201
Query: 220 RRL 222
RRL
Sbjct: 202 RRL 204
Score = 30.8 bits (68), Expect = 2.3
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 7 RVSAGVGSPHCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYLPPAPWS 66
R G+ +P S + GS+ + ++ G+P+ + L PR+ WS
Sbjct: 306 RRECGLAAPRFSFNDPSGSEEADFLSAETGSPRLTMHYPCLEKPRI------------WS 353
Query: 67 SLATPSALLGSSCAPPPPPARCPQPRALSPELGTKAG--PRRPHRWELPR 114
T +A S PPAR PR SPE G P R +PR
Sbjct: 354 LAHTATA----SAVEGAPPAR---PRPRSPECRMIPGQPPASARRLSVPR 396
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 57.4 bits (137), Expect = 2e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 163 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 222
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 57.0 bits (136), Expect = 3e-08
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 163 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 222
G R N +ES L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 126 GDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 185
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 165 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 224
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
Query: 225 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 279
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 54.7 bits (130), Expect = 1e-07
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 168 RGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 222
R N +++ L+ WL EHR N YP++ EK +L+ T ++ QV WF NARRRL
Sbjct: 117 RKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,968,690
Number of Sequences: 37866
Number of extensions: 1204647
Number of successful extensions: 9319
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 642
Number of HSP's that attempted gapping in prelim test: 7419
Number of HSP's gapped (non-prelim): 2197
length of query: 401
length of database: 18,247,518
effective HSP length: 104
effective length of query: 297
effective length of database: 14,309,454
effective search space: 4249907838
effective search space used: 4249907838
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.