Guide to the Human Genome
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Name: SLC9A1 Sequence: fasta or formatted (815aa) NCBI GI: 27777632
Description:

solute carrier family 9, isoform A1

Referenced in:

Calmodulin and Calcium
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         44           2
 C cysteine            1.1          9           1
 D aspartate           3.9         32           3
 E glutamate           5.9         48           3
 F phenylalanine       5.8         47           2
 G glycine             7.0         57           2
 H histidine           3.4         28           3
 I isoleucine          7.9         64           2
 K lysine              4.9         40           3
 L leucine            12.3        100           2
 M methionine          2.2         18           2
 N asparagine          2.8         23           2
 P proline             6.3         51           2
 Q glutamine           2.6         21           1
 R arginine            4.4         36           2
 S serine              7.4         60           2
 T threonine           4.9         40           2
 V valine              8.5         69           3
 W tryptophan          1.0          8           1
 Y tyrosine            2.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9, isoform A1 
SLC9A2                0.398   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A4                0.337   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A3                0.296   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A5                0.289   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A8                0.130   sodium/hydrogen exchanger 8 
SLC9A9                0.107   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A6                0.104   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A6                0.103   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A7                0.101   solute carrier family 9, member 7 
SLC9A11               0.019   solute carrier family 9, member 11 
SLC9A10               0.019   sperm-specific sodium proton exchanger 
DNAJC6                0.009   DnaJ (Hsp40) homolog, subfamily C, member 6 
MAP7                  0.006   microtubule-associated protein 7 
PIGW                  0.006   phosphatidylinositol glycan, class W 
SLC37A2               0.006   solute carrier family 37 (glycerol-3-phosphate tran...
SLC37A2               0.006   solute carrier family 37 (glycerol-3-phosphate trans...
NFKBIE                0.006   nuclear factor of kappa light polypeptide gene enhan...
CMPK2                 0.005   UMP-CMP kinase 2 
FMNL1                 0.005   formin-like 1 
KIAA1409              0.005   hypothetical protein LOC57578 
ZBTB9                 0.004   zinc finger and BTB domain containing 9 
PER1                  0.004   period 1 
TP53BP2               0.004   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.004   tumor protein p53 binding protein, 2 isoform 2 
GNAS                  0.004   GNAS complex locus alex 
PRKG1                 0.004   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
LCP2                  0.004   lymphocyte cytosolic protein 2 
PPP1R13B              0.004   apoptosis-stimulating protein of p53, 1 
SLC4A4                0.004   solute carrier family 4, sodium bicarbonate cotrans...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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