Guide to the Human Genome
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Name: SLC9A4 Sequence: fasta or formatted (798aa) NCBI GI: 148727259
Description:

solute carrier family 9 (sodium/hydrogen exchanger), member 4

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         55           3
 C cysteine            1.4         11           1
 D aspartate           3.3         26           3
 E glutamate           5.6         45           2
 F phenylalanine       6.1         49           2
 G glycine             6.8         54           2
 H histidine           2.4         19           2
 I isoleucine          7.8         62           2
 K lysine              5.3         42           2
 L leucine            11.0         88           4
 M methionine          2.6         21           2
 N asparagine          3.3         26           1
 P proline             3.9         31           2
 Q glutamine           3.6         29           1
 R arginine            4.8         38           2
 S serine              8.9         71           2
 T threonine           4.5         36           2
 V valine              6.4         51           2
 W tryptophan          1.4         11           2
 Y tyrosine            4.1         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9 (sodium/hydrogen exchanger)... 
SLC9A2                0.516   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A1                0.345   solute carrier family 9, isoform A1 
SLC9A3                0.281   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A5                0.280   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A8                0.125   sodium/hydrogen exchanger 8 
SLC9A9                0.112   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A6                0.111   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A6                0.105   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A7                0.097   solute carrier family 9, member 7 
SLC9A10               0.021   sperm-specific sodium proton exchanger 
SLC9A11               0.015   solute carrier family 9, member 11 
GPR148                0.004   G protein-coupled receptor 148 
YIF1B                 0.004   Yip1 interacting factor homolog B isoform 7 
LOC643854             0.004   hypothetical protein LOC643854 
SYT12                 0.004   synaptotagmin XII 
PODXL2                0.004   podocalyxin-like 2 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 2 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 6 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 2 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 3 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 4 
YIF1B                 0.003   Yip1 interacting factor homolog B isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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