Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC9A6 Sequence: fasta or formatted (669aa) NCBI GI: 5454070
Description:

solute carrier family 9 (sodium/hydrogen exchanger), member 6 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [701aa] solute carrier family 9 (sodium/hydrogen exchanger), member 6 iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         57           2
 C cysteine            1.3          9           2
 D aspartate           4.5         30           3
 E glutamate           4.3         29           2
 F phenylalanine       7.5         50           2
 G glycine             7.8         52           4
 H histidine           2.5         17           1
 I isoleucine          4.9         33           2
 K lysine              1.8         12           1
 L leucine            13.3         89           3
 M methionine          3.0         20           3
 N asparagine          3.7         25           2
 P proline             3.7         25           2
 Q glutamine           2.5         17           1
 R arginine            5.7         38           2
 S serine              6.7         45           3
 T threonine           7.5         50           3
 V valine              6.6         44           2
 W tryptophan          1.3          9           1
 Y tyrosine            2.7         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 9 (sodium/hydrogen exchanger), ... 
SLC9A6                0.988   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A7                0.642   solute carrier family 9, member 7 
SLC9A9                0.530   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A8                0.184   sodium/hydrogen exchanger 8 
SLC9A3                0.139   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A2                0.133   solute carrier family 9 (sodium/hydrogen exchanger),...
SLC9A4                0.133   solute carrier family 9 (sodium/hydrogen exchanger)...
SLC9A1                0.126   solute carrier family 9, isoform A1 
SLC9A5                0.125   solute carrier family 9 (sodium/hydrogen exchanger), ...
SLC9A10               0.019   sperm-specific sodium proton exchanger 
TRIM37                0.008   tripartite motif-containing 37 protein 
TRIM37                0.008   tripartite motif-containing 37 protein 
CBLB                  0.008   Cas-Br-M (murine) ecotropic retroviral transforming ...
RFX6                  0.005   regulatory factor X, 6 
SLC9A11               0.005   solute carrier family 9, member 11 
SLC19A3               0.005   solute carrier family 19, member 3 
ABCG4                 0.005   ATP-binding cassette, subfamily G, member 4 
ABCG4                 0.005   ATP-binding cassette, subfamily G, member 4 
SEPT9                 0.005   septin 9 isoform d 
CCDC88C               0.004   DVL-binding protein DAPLE 
BTD                   0.004   biotinidase precursor 
ZC3H4                 0.004   zinc finger CCCH-type containing 4 
MAN2C1                0.004   mannosidase, alpha, class 2C, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press