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Search of human proteins with 27734859
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27734859 ring finger protein 175 [Homo sapiens]
(328 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27734859 ring finger protein 175 [Homo sapiens] 683 0.0
gi|21361732 ring finger protein 121 [Homo sapiens] 500 e-142
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 47 2e-05
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 47 2e-05
gi|87241872 ring finger protein 151 [Homo sapiens] 43 4e-04
gi|37622894 ring finger protein 126 [Homo sapiens] 42 7e-04
gi|37595553 ring finger protein 111 [Homo sapiens] 41 0.002
gi|34577087 ring finger protein 13 [Homo sapiens] 40 0.003
gi|6005864 ring finger protein 13 [Homo sapiens] 40 0.003
gi|57165361 ring finger protein 165 [Homo sapiens] 40 0.004
gi|33859668 Rabring 7 [Homo sapiens] 39 0.005
gi|21314654 ring finger protein 139 [Homo sapiens] 39 0.006
gi|7706039 ring finger protein 181 [Homo sapiens] 39 0.006
gi|150170725 zinc and ring finger 4 [Homo sapiens] 39 0.006
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 38 0.011
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 38 0.011
gi|13569903 ring finger protein 32 [Homo sapiens] 38 0.014
gi|14149702 ring finger protein 167 [Homo sapiens] 37 0.018
gi|150378447 zinc and ring finger 3 [Homo sapiens] 37 0.024
gi|116235456 ring finger protein 214 [Homo sapiens] 37 0.024
gi|116235451 ring finger protein 214 [Homo sapiens] 37 0.024
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 36 0.054
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 36 0.054
gi|7706091 bifunctional apoptosis regulator [Homo sapiens] 36 0.054
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 35 0.070
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 35 0.070
gi|29789407 ring finger protein 149 [Homo sapiens] 35 0.091
gi|21071001 autocrine motility factor receptor [Homo sapiens] 35 0.12
gi|5031825 ring finger protein 103 [Homo sapiens] 35 0.12
gi|21389515 ring finger protein 145 [Homo sapiens] 35 0.12
>gi|27734859 ring finger protein 175 [Homo sapiens]
Length = 328
Score = 683 bits (1763), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MAAGTAARKAAPVLEAPPQQEQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFL 60
MAAGTAARKAAPVLEAPPQQEQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFL
Sbjct: 1 MAAGTAARKAAPVLEAPPQQEQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFL 60
Query: 61 CVLVIAQIVLVQWRQRHGRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYIL 120
CVLVIAQIVLVQWRQRHGRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYIL
Sbjct: 61 CVLVIAQIVLVQWRQRHGRSYNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYIL 120
Query: 121 FRATRKPLSGRTPRLVYKWFLLIYKLSYAFGVVGYLAIMFTMCGFNLFFKIKARDSMDFG 180
FRATRKPLSGRTPRLVYKWFLLIYKLSYAFGVVGYLAIMFTMCGFNLFFKIKARDSMDFG
Sbjct: 121 FRATRKPLSGRTPRLVYKWFLLIYKLSYAFGVVGYLAIMFTMCGFNLFFKIKARDSMDFG 180
Query: 181 IVSLFYGLYYGVMGRDFAEICSDYMASTIGFYSVSRLPTRSLSDNICAVCGQKIIVELDE 240
IVSLFYGLYYGVMGRDFAEICSDYMASTIGFYSVSRLPTRSLSDNICAVCGQKIIVELDE
Sbjct: 181 IVSLFYGLYYGVMGRDFAEICSDYMASTIGFYSVSRLPTRSLSDNICAVCGQKIIVELDE 240
Query: 241 EGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMISNPWERTHFLYGQI 300
EGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMISNPWERTHFLYGQI
Sbjct: 241 EGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMISNPWERTHFLYGQI 300
Query: 301 LDWLRYLVAWQPVVIGIVQGINYSLGLE 328
LDWLRYLVAWQPVVIGIVQGINYSLGLE
Sbjct: 301 LDWLRYLVAWQPVVIGIVQGINYSLGLE 328
>gi|21361732 ring finger protein 121 [Homo sapiens]
Length = 327
Score = 500 bits (1288), Expect = e-142
Identities = 220/308 (71%), Positives = 267/308 (86%)
Query: 21 EQLSHTKLSAEDTWNLQQERMYKMHRGHDSMHVEMILIFLCVLVIAQIVLVQWRQRHGRS 80
+++ + LS E+ W ++ RM+ HRGH++MH EM+LI + LV+AQ++LVQW+QRH RS
Sbjct: 20 DEVDMSDLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRS 79
Query: 81 YNLVTLLQMWVVPLYFTIKLYWWRFLSMWGMFSVITSYILFRATRKPLSGRTPRLVYKWF 140
YN+VTL QMWVVPLYFT+KL+WWRFL +W +FS +T+++ FRATRKPL TPRLVYKWF
Sbjct: 80 YNMVTLFQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPRLVYKWF 139
Query: 141 LLIYKLSYAFGVVGYLAIMFTMCGFNLFFKIKARDSMDFGIVSLFYGLYYGVMGRDFAEI 200
LLIYK+SYA G+VGY+A+MFT+ G NL FKIK D+MDFGI LFYGLYYGV+ RDFAE+
Sbjct: 140 LLIYKISYATGIVGYMAVMFTLFGLNLLFKIKPEDAMDFGISLLFYGLYYGVLERDFAEM 199
Query: 201 CSDYMASTIGFYSVSRLPTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFC 260
C+DYMASTIGFYS S +PT+ LSD++CAVCGQ+I V++ EEG+IENTY+LSCNHVFHEFC
Sbjct: 200 CADYMASTIGFYSESGMPTKHLSDSVCAVCGQQIFVDVSEEGIIENTYRLSCNHVFHEFC 259
Query: 261 IRGWCIVGKKQTCPYCKEKVDLKRMISNPWERTHFLYGQILDWLRYLVAWQPVVIGIVQG 320
IRGWCIVGKKQTCPYCKEKVDLKRM SNPWER H +YGQ+LDWLRYLVAWQPV+IG+VQG
Sbjct: 260 IRGWCIVGKKQTCPYCKEKVDLKRMFSNPWERPHVMYGQLLDWLRYLVAWQPVIIGVVQG 319
Query: 321 INYSLGLE 328
INY LGLE
Sbjct: 320 INYILGLE 327
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 224 DNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
DN+C +C E ++ +L CNH+FH C+R W ++QTCP C+ V
Sbjct: 288 DNVCIIC---------REEMVTGAKRLPCNHIFHTSCLRSW--FQRQQTCPTCRMDV 333
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 47.4 bits (111), Expect = 2e-05
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 224 DNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
DN+C +C E ++ +L CNH+FH C+R W ++QTCP C+ V
Sbjct: 288 DNVCIIC---------REEMVTGAKRLPCNHIFHTSCLRSW--FQRQQTCPTCRMDV 333
>gi|87241872 ring finger protein 151 [Homo sapiens]
Length = 245
Score = 42.7 bits (99), Expect = 4e-04
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 12/77 (15%)
Query: 210 GFYSVSRLPTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGK 269
G Y ++ + S+ +C+VC G+++ +L C+H+F + CI W + +
Sbjct: 3 GGYDLNLFASPPDSNFVCSVC----------HGVLKRPARLPCSHIFCKKCILRW--LAR 50
Query: 270 KQTCPYCKEKVDLKRMI 286
++TCP C+++V K+++
Sbjct: 51 QKTCPCCRKEVKRKKVV 67
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 42.0 bits (97), Expect = 7e-04
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMI 286
C VC D+ L E QL CNH+FH+ CI W + + +CP C++ + +
Sbjct: 229 CPVCK-------DDYALGERVRQLPCNHLFHDGCIVPW--LEQHDSCPVCRKSLTGQNTA 279
Query: 287 SNP 289
+NP
Sbjct: 280 TNP 282
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 219 TRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKE 278
T ++ C +C + + EEG E+ +L C H+FH+ C+ W I KK CP C+
Sbjct: 926 TEEDTEEKCTIC-----LSILEEG--EDVRRLPCMHLFHQVCVDQWLITNKK--CPICRV 976
Query: 279 KVD 281
++
Sbjct: 977 DIE 979
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 225 NICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
++CA+C LDE + L C+H +H C+ W + K+TCP CK+KV
Sbjct: 238 DVCAIC-------LDEYEDGDKLRILPCSHAYHCKCVDPW-LTKTKKTCPVCKQKV 285
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 225 NICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
++CA+C LDE + L C+H +H C+ W + K+TCP CK+KV
Sbjct: 238 DVCAIC-------LDEYEDGDKLRILPCSHAYHCKCVDPW-LTKTKKTCPVCKQKV 285
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 39.7 bits (91), Expect = 0.004
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Query: 223 SDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVD 281
+D C +C + + E+G E+ +L C H+FH+ C+ W + KK CP C+ ++
Sbjct: 290 TDEKCTIC-----LSMLEDG--EDVRRLPCMHLFHQLCVDQWLAMSKK--CPICRVDIE 339
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 39.3 bits (90), Expect = 0.005
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 9/55 (16%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVD 281
C VC + VE E QL CNH FH CI W + TCP C++ ++
Sbjct: 228 CPVCKEDYTVE-------EEVRQLPCNHFFHSSCIVPW--LELHDTCPVCRKSLN 273
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Query: 224 DNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
+++CA+C + + CNH FH C+R W + + TCP C +KV
Sbjct: 544 NDVCAICYHEFTT---------SARITPCNHYFHALCLRKWLYI--QDTCPMCHQKV 589
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 38.9 bits (89), Expect = 0.006
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 9/51 (17%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCK 277
C VC ++E +EE E ++ C+H+FH CI W + K +CP C+
Sbjct: 76 CPVC----LLEFEEE---ETAIEMPCHHLFHSSCILPW--LSKTNSCPLCR 117
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 38.9 bits (89), Expect = 0.006
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 215 SRLPTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCP 274
+++ T + +++CA+C LDE + L C+H +H CI W +++CP
Sbjct: 297 AQVRTFTWHNDLCAIC-------LDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCP 349
Query: 275 YCKEKV 280
CK+ V
Sbjct: 350 VCKQSV 355
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 38.1 bits (87), Expect = 0.011
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCK 277
CAVC +EL + + L+CNH+FH+ C+ W + + +TCP CK
Sbjct: 277 CAVC-----IELYKPNDLVRI--LTCNHIFHKTCVDPWLL--EHRTCPMCK 318
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 38.1 bits (87), Expect = 0.011
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCK 277
CAVC +EL + + L+CNH+FH+ C+ W + + +TCP CK
Sbjct: 251 CAVC-----IELYKPNDLVRI--LTCNHIFHKTCVDPWLL--EHRTCPMCK 292
>gi|13569903 ring finger protein 32 [Homo sapiens]
Length = 362
Score = 37.7 bits (86), Expect = 0.014
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 250 LSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMI 286
LSC+HVFH+ C++ + K+TCP C++ R+I
Sbjct: 142 LSCSHVFHKACLQAFEKFTNKKTCPLCRKNQYQTRVI 178
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 37.4 bits (85), Expect = 0.018
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 225 NICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKV 280
++CA+C LDE + L C H +H C+ W + ++TCP CK+ V
Sbjct: 228 DVCAIC-------LDEYEDGDKLRVLPCAHAYHSRCVDPW-LTQTRKTCPICKQPV 275
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 37.0 bits (84), Expect = 0.024
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 213 SVSRLPTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQT 272
++ L + S SD CA+C +K I +G E + C H FH C+ W + + T
Sbjct: 181 ALDTLSSSSTSD--CAICLEKYI-----DG--EELRVIPCTHRFHRKCVDPWLL--QHHT 229
Query: 273 CPYCKEKV 280
CP+C+ +
Sbjct: 230 CPHCRHNI 237
>gi|116235456 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 37.0 bits (84), Expect = 0.024
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 226 ICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYC 276
+C +C QK++ + + ++C HV H+ CI+ W TCP+C
Sbjct: 657 LCLMC-QKLVQPSE-------LHPMACTHVLHKECIKFWAQTNTNDTCPFC 699
>gi|116235451 ring finger protein 214 [Homo sapiens]
Length = 703
Score = 37.0 bits (84), Expect = 0.024
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 226 ICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYC 276
+C +C QK++ + + ++C HV H+ CI+ W TCP+C
Sbjct: 657 LCLMC-QKLVQPSE-------LHPMACTHVLHKECIKFWAQTNTNDTCPFC 699
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 35.8 bits (81), Expect = 0.054
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 214 VSRLPTRSLSDN----ICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGK 269
+ L RS +N C+VC I E E + +L C+H +H CI W + +
Sbjct: 553 IDNLAMRSFGENDALKTCSVC----ITEYTEGNKLR---KLPCSHEYHVHCIDRW--LSE 603
Query: 270 KQTCPYCKEKV 280
TCP C+ V
Sbjct: 604 NSTCPICRRAV 614
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 35.8 bits (81), Expect = 0.054
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 214 VSRLPTRSLSDN----ICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGK 269
+ L RS +N C+VC I E E + +L C+H +H CI W + +
Sbjct: 553 IDNLAMRSFGENDALKTCSVC----ITEYTEGNKLR---KLPCSHEYHVHCIDRW--LSE 603
Query: 270 KQTCPYCKEKV 280
TCP C+ V
Sbjct: 604 NSTCPICRRAV 614
>gi|7706091 bifunctional apoptosis regulator [Homo sapiens]
Length = 450
Score = 35.8 bits (81), Expect = 0.054
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 243 LIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCKEK 279
++ N L+C H F C+ W KK CP C+EK
Sbjct: 40 ILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREK 76
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 35.4 bits (80), Expect = 0.070
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 250 LSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVD 281
L C H FH CI W + + TCPYC+ VD
Sbjct: 104 LPCKHFFHLDCIDTWLL--RSFTCPYCRGPVD 133
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 35.4 bits (80), Expect = 0.070
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 250 LSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVD 281
L C H FH CI W + + TCPYC+ VD
Sbjct: 104 LPCKHFFHLDCIDTWLL--RSFTCPYCRGPVD 133
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 35.0 bits (79), Expect = 0.091
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 227 CAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCK 277
CAVC + V+ + L C H+FH CI W + +TCP CK
Sbjct: 269 CAVCIENFKVK-------DIIRILPCKHIFHRICIDPWLL--DHRTCPMCK 310
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 34.7 bits (78), Expect = 0.12
Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 212 YSVSRLPTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQ 271
++V+ +++++ CA+C + + +L C H+FH C+R W + +
Sbjct: 326 FAVATPEELAVNNDDCAICWDSM----------QAARKLPCGHLFHNSCLRSW--LEQDT 373
Query: 272 TCPYCKEKVDL 282
+CP C+ +++
Sbjct: 374 SCPTCRMSLNI 384
>gi|5031825 ring finger protein 103 [Homo sapiens]
Length = 685
Score = 34.7 bits (78), Expect = 0.12
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 218 PTRSLSDNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYCK 277
P L C VC +E E G + L C HVFH+ CI W + G + CP C+
Sbjct: 612 PADMLHCTECVVC-----LENFENGCL--LMGLPCGHVFHQNCIVMW-LAGGRHCCPVCR 663
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 34.7 bits (78), Expect = 0.12
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
Query: 224 DNICAVCGQKIIVELDEEGLIENTYQLSCNHVFHEFCIRGWCIVGKKQTCPYC 276
++ICA+C Q + ++ C+H FH C++ W V ++TCP C
Sbjct: 562 NDICAICYQDM----------KSAVITPCSHFFHAGCLKKWLYV--QETCPLC 602
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.141 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,198,721
Number of Sequences: 37866
Number of extensions: 519192
Number of successful extensions: 1560
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 1522
Number of HSP's gapped (non-prelim): 109
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.