Guide to the Human Genome
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Name: RNF103 Sequence: fasta or formatted (685aa) NCBI GI: 5031825
Description:

ring finger protein 103

Referenced in:

Cerebellum
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         30           2
 C cysteine            2.6         18           2
 D aspartate           5.0         34           1
 E glutamate           7.4         51           3
 F phenylalanine       5.5         38           2
 G glycine             5.0         34           2
 H histidine           2.5         17           1
 I isoleucine          4.5         31           2
 K lysine              5.4         37           3
 L leucine            11.4         78           3
 M methionine          2.6         18           1
 N asparagine          5.0         34           4
 P proline             4.4         30           2
 Q glutamine           2.6         18           1
 R arginine            4.2         29           3
 S serine              8.8         60           2
 T threonine           5.0         34           3
 V valine              5.8         40           2
 W tryptophan          3.4         23           1
 Y tyrosine            4.5         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 103 
RNF167                0.022   ring finger protein 167 
RNF38                 0.019   ring finger protein 38 isoform 2 
RNF38                 0.019   ring finger protein 38 isoform 2 
RNF38                 0.019   ring finger protein 38 isoform 3 
RNF38                 0.019   ring finger protein 38 isoform 2 
RNF38                 0.019   ring finger protein 38 isoform 1 
RNF44                 0.019   ring finger protein 44 
ZNRF4                 0.019   zinc and ring finger 4 
RNF13                 0.018   ring finger protein 13 
RNF13                 0.018   ring finger protein 13 
RNF165                0.018   ring finger protein 165 
RNF181                0.018   ring finger protein 181 
RNF130                0.018   ring finger protein 130 
RNF111                0.017   ring finger protein 111 
RNF122                0.017   ring finger protein 122 
RNF149                0.016   ring finger protein 149 
RNF126                0.016   ring finger protein 126 
PHRF1                 0.016   PHD and ring finger domains 1 
RNF24                 0.016   ring finger protein 24 isoform 2 
RNF24                 0.016   ring finger protein 24 isoform 1 
RNF24                 0.016   ring finger protein 24 isoform 1 
ZNRF3                 0.016   zinc and ring finger 3 
RNF6                  0.016   ring finger protein 6 
LOC100290625          0.016   PREDICTED: hypothetical protein XP_002347002 
LOC100289630          0.016   PREDICTED: hypothetical protein XP_002342853 
RNF43                 0.016   ring finger protein 43 
RNF6                  0.016   ring finger protein 6 
RNF6                  0.016   ring finger protein 6 
RNF150                0.014   ring finger protein 150 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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